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Conserved domains on  [gi|148540038|ref|NP_001017927|]
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UPF0538 protein C2orf76 isoform 1 [Homo sapiens]

Protein Classification

AIM29 family protein( domain architecture ID 10562911)

altered inheritance rate of mitochondria protein 29 (AIM29) family protein is a DUF2340 domain-containing protein similar to Saccharomyces cerevisiae AIM29 that may be involved in mitochondrial organization and biogenesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2340 pfam10209
Uncharacterized conserved protein (DUF2340); This is a family of small proteins of ...
 8-126 2.45e-59

Uncharacterized conserved protein (DUF2340); This is a family of small proteins of approximately 150 amino acids of unknown function.


:

Pssm-ID: 462998  Cd Length: 120  Bit Score: 178.48  E-value: 2.45e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148540038    8 ITVRLIRSFEHRNFKPVVYHGVNL-DQTVKEFIVFLKQDIPLRTNLPPpFRNYKYDALKIIHQAHKSKTNELVLSLEDDE 86
Cdd:pfam10209   1 ITVRVIKSFEYRNVKNLVLHNVDLtTTTVKDLKELVKEEIKTRPGLKP-FRNVKYDTLKIYTKAHGSKTNNLVINLDHDD 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 148540038   87 RLLLKEDS-TLKAAGIASETEIAFFCEEDYKNYKANPISSW 126
Cdd:pfam10209  80 DWILDDDDkTLAELGVENETELSFFNREDYLEFKANPEEKW 120
 
Name Accession Description Interval E-value
DUF2340 pfam10209
Uncharacterized conserved protein (DUF2340); This is a family of small proteins of ...
 8-126 2.45e-59

Uncharacterized conserved protein (DUF2340); This is a family of small proteins of approximately 150 amino acids of unknown function.


Pssm-ID: 462998  Cd Length: 120  Bit Score: 178.48  E-value: 2.45e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148540038    8 ITVRLIRSFEHRNFKPVVYHGVNL-DQTVKEFIVFLKQDIPLRTNLPPpFRNYKYDALKIIHQAHKSKTNELVLSLEDDE 86
Cdd:pfam10209   1 ITVRVIKSFEYRNVKNLVLHNVDLtTTTVKDLKELVKEEIKTRPGLKP-FRNVKYDTLKIYTKAHGSKTNNLVINLDHDD 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 148540038   87 RLLLKEDS-TLKAAGIASETEIAFFCEEDYKNYKANPISSW 126
Cdd:pfam10209  80 DWILDDDDkTLAELGVENETELSFFNREDYLEFKANPEEKW 120
 
Name Accession Description Interval E-value
DUF2340 pfam10209
Uncharacterized conserved protein (DUF2340); This is a family of small proteins of ...
 8-126 2.45e-59

Uncharacterized conserved protein (DUF2340); This is a family of small proteins of approximately 150 amino acids of unknown function.


Pssm-ID: 462998  Cd Length: 120  Bit Score: 178.48  E-value: 2.45e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148540038    8 ITVRLIRSFEHRNFKPVVYHGVNL-DQTVKEFIVFLKQDIPLRTNLPPpFRNYKYDALKIIHQAHKSKTNELVLSLEDDE 86
Cdd:pfam10209   1 ITVRVIKSFEYRNVKNLVLHNVDLtTTTVKDLKELVKEEIKTRPGLKP-FRNVKYDTLKIYTKAHGSKTNNLVINLDHDD 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 148540038   87 RLLLKEDS-TLKAAGIASETEIAFFCEEDYKNYKANPISSW 126
Cdd:pfam10209  80 DWILDDDDkTLAELGVENETELSFFNREDYLEFKANPEEKW 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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