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Conserved domains on  [gi|62860124|ref|NP_001016632|]
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sorting nexin-22 [Xenopus tropicalis]

Protein Classification

PX domain-containing protein( domain architecture ID 10160756)

PX (Phox Homology) domain-containing protein may bind phosphoinositides and may function in targeting proteins to membranes

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PX_SNX22 cd06880
The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a ...
2-112 2.51e-60

The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX22 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. The biological function of SNX22 is not yet known.


:

Pssm-ID: 132790  Cd Length: 110  Bit Score: 183.63  E-value: 2.51e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   2 IDVYIPSVGHQVYKSDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKTCKVPDFPPKRVPNWMPKVQEQRRQGLEA 81
Cdd:cd06880   1 IEVSIPSYRLEVDESEKPYTVFTIEVLVNGRRHTVEKRYSEFHALHKKLKKSIKTPDFPPKRVRNWNPKVLEQRRQGLEA 80
                        90       100       110
                ....*....|....*....|....*....|.
gi 62860124  82 YIQGVLWYNTdVPKELLDFLKVRHFHKDKKN 112
Cdd:cd06880  81 YLQGLLKINE-LPKQLLDFLGVRHFPSLPKS 110
 
Name Accession Description Interval E-value
PX_SNX22 cd06880
The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a ...
2-112 2.51e-60

The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX22 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. The biological function of SNX22 is not yet known.


Pssm-ID: 132790  Cd Length: 110  Bit Score: 183.63  E-value: 2.51e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   2 IDVYIPSVGHQVYKSDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKTCKVPDFPPKRVPNWMPKVQEQRRQGLEA 81
Cdd:cd06880   1 IEVSIPSYRLEVDESEKPYTVFTIEVLVNGRRHTVEKRYSEFHALHKKLKKSIKTPDFPPKRVRNWNPKVLEQRRQGLEA 80
                        90       100       110
                ....*....|....*....|....*....|.
gi 62860124  82 YIQGVLWYNTdVPKELLDFLKVRHFHKDKKN 112
Cdd:cd06880  81 YLQGLLKINE-LPKQLLDFLGVRHFPSLPKS 110
PX pfam00787
PX domain; PX domains bind to phosphoinositides.
27-87 6.85e-12

PX domain; PX domains bind to phosphoinositides.


Pssm-ID: 459940  Cd Length: 84  Bit Score: 58.79  E-value: 6.85e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62860124    27 VLFNGRRHTLDRRYSEFHALHKLLKK---TCKVPDFPPKRVP-NWMPKVQEQRRQGLEAYIQGVL 87
Cdd:pfam00787   2 PTFSLEEWSVRRRYSDFVELHKKLLRkfpSVIIPPLPPKRWLgRYNEEFIEKRRKGLEQYLQRLL 66
PX smart00312
PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function ...
15-101 1.88e-11

PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function present in phox proteins, PLD isoforms, a PI3K isoform.


Pssm-ID: 214610  Cd Length: 105  Bit Score: 58.12  E-value: 1.88e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124     15 KSDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKK---TCKVPDFPPK----RVPNWMPKVQEQRRQGLEAYIQGVL 87
Cdd:smart00312   9 DGKHYYYVIEIETKTGLEEWTVSRRYSDFLELHSKLKKhfpRSILPPLPGKklfgRLNNFSEEFIEKRRRGLEKYLQSLL 88
                           90
                   ....*....|....*...
gi 62860124     88 ----WYNTDvpKELLDFL 101
Cdd:smart00312  89 nhpeLINHS--EVVLEFL 104
COG5391 COG5391
Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function ...
7-84 2.08e-07

Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only];


Pssm-ID: 227680 [Multi-domain]  Cd Length: 524  Bit Score: 50.18  E-value: 2.08e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   7 PSVGHQVYKSdKTHTVFRvdvLFNGRRHTLDRRYSEFHALHKLLKK---TCKVPDFPPKRV------PNWMPKVQEQRRQ 77
Cdd:COG5391 150 KHTSYEIITV-TNLPSFQ---LRESRPLVVRRRYSDFESLHSILIKllpLCAIPPLPSKKSnseyygDRFSDEFIEERRQ 225

                ....*..
gi 62860124  78 GLEAYIQ 84
Cdd:COG5391 226 SLQNFLR 232
 
Name Accession Description Interval E-value
PX_SNX22 cd06880
The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a ...
2-112 2.51e-60

The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX22 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. The biological function of SNX22 is not yet known.


Pssm-ID: 132790  Cd Length: 110  Bit Score: 183.63  E-value: 2.51e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   2 IDVYIPSVGHQVYKSDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKTCKVPDFPPKRVPNWMPKVQEQRRQGLEA 81
Cdd:cd06880   1 IEVSIPSYRLEVDESEKPYTVFTIEVLVNGRRHTVEKRYSEFHALHKKLKKSIKTPDFPPKRVRNWNPKVLEQRRQGLEA 80
                        90       100       110
                ....*....|....*....|....*....|.
gi 62860124  82 YIQGVLWYNTdVPKELLDFLKVRHFHKDKKN 112
Cdd:cd06880  81 YLQGLLKINE-LPKQLLDFLGVRHFPSLPKS 110
PX_SNARE cd06897
The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi; The PX domain ...
16-104 7.13e-16

The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. This subfamily is composed of fungal proteins similar to Saccharomyces cerevisiae Vam7p. They contain an N-terminal PX domain and a C-terminal SNARE domain. The SNARE (Soluble NSF attachment protein receptor) family of proteins are integral membrane proteins that serve as key factors for vesicular trafficking. Vam7p is anchored at the vacuolar membrane through the specific interaction of its PX domain with phosphatidylinositol-3-phosphate (PI3P) present in bilayers. It plays an essential role in vacuole fusion. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction.


Pssm-ID: 132807  Cd Length: 108  Bit Score: 69.99  E-value: 7.13e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124  16 SDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKTCKVP---DFPPKRVPNWM---PKVQEQRRQGLEAYIQGVL-- 87
Cdd:cd06897  11 SPKPYTVYNIQVRLPLRSYTVSRRYSEFVALHKQLESEVGIEppyPLPPKSWFLSTssnPKLVEERRVGLEAFLRALLnd 90
                        90       100
                ....*....|....*....|.
gi 62860124  88 ----WYNTDVpkeLLDFLKVR 104
Cdd:cd06897  91 edsrWRNSPA---VKEFLNLP 108
PX_domain cd06093
The Phox Homology domain, a phosphoinositide binding module; The PX domain is a ...
3-102 2.89e-14

The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to membranes. Proteins containing PX domains interact with PIs and have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. Many members of this superfamily bind phosphatidylinositol-3-phosphate (PI3P) but in some cases, other PIs such as PI4P or PI(3,4)P2, among others, are the preferred substrates. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction, as in the cases of p40phox, p47phox, and some sorting nexins (SNXs). The PX domain is conserved from yeast to humans and is found in more than 100 proteins. The majority of PX domain-containing proteins are SNXs, which play important roles in endosomal sorting.


Pssm-ID: 132768 [Multi-domain]  Cd Length: 106  Bit Score: 65.46  E-value: 2.89e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   3 DVYIPSVgHQVYKSDKTHTVFRVDV-LFNGRRHTLDRRYSEFHALHKLLKKT---CKVPDFPPKRVPNWM-PKVQEQRRQ 77
Cdd:cd06093   1 SVSIPDY-EKVKDGGKKYVVYIIEVtTQGGEEWTVYRRYSDFEELHEKLKKKfpgVILPPLPPKKLFGNLdPEFIEERRK 79
                        90       100
                ....*....|....*....|....*..
gi 62860124  78 GLEAYIQGVLwYNTDV--PKELLDFLK 102
Cdd:cd06093  80 QLEQYLQSLL-NHPELrnSEELKEFLE 105
PX pfam00787
PX domain; PX domains bind to phosphoinositides.
27-87 6.85e-12

PX domain; PX domains bind to phosphoinositides.


Pssm-ID: 459940  Cd Length: 84  Bit Score: 58.79  E-value: 6.85e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62860124    27 VLFNGRRHTLDRRYSEFHALHKLLKK---TCKVPDFPPKRVP-NWMPKVQEQRRQGLEAYIQGVL 87
Cdd:pfam00787   2 PTFSLEEWSVRRRYSDFVELHKKLLRkfpSVIIPPLPPKRWLgRYNEEFIEKRRKGLEQYLQRLL 66
PX smart00312
PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function ...
15-101 1.88e-11

PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function present in phox proteins, PLD isoforms, a PI3K isoform.


Pssm-ID: 214610  Cd Length: 105  Bit Score: 58.12  E-value: 1.88e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124     15 KSDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKK---TCKVPDFPPK----RVPNWMPKVQEQRRQGLEAYIQGVL 87
Cdd:smart00312   9 DGKHYYYVIEIETKTGLEEWTVSRRYSDFLELHSKLKKhfpRSILPPLPGKklfgRLNNFSEEFIEKRRRGLEKYLQSLL 88
                           90
                   ....*....|....*...
gi 62860124     88 ----WYNTDvpKELLDFL 101
Cdd:smart00312  89 nhpeLINHS--EVVLEFL 104
PX_IRAS cd06875
The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor ...
3-108 1.97e-10

The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor Antisera-Selected; The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Imidazoline Receptor Antisera-Selected (IRAS), also called nischarin, contains an N-terminal PX domain, leucine rich repeats, and a predicted coiled coil domain. The PX domain of IRAS binds to phosphatidylinositol-3-phosphate in membranes. Together with the coiled coil domain, it is essential for the localization of IRAS to endosomes. IRAS has been shown to interact with integrin and inhibit cell migration. Its interaction with alpha5 integrin causes a redistribution of the receptor from the cell surface to endosomal structures, suggesting that IRAS may function as a sorting nexin (SNX) which regulates the endosomal trafficking of integrin. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132785  Cd Length: 116  Bit Score: 55.75  E-value: 1.97e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   3 DVYIPSVGHqvyksDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKTCKVPD--FPPKRV-PNWMPKVQEQRRQGL 79
Cdd:cd06875   5 KIRIPSAET-----VEGYTVYIIEVKVGSVEWTVKHRYSDFAELHDKLVAEHKVDKdlLPPKKLiGNKSPSFVEKRRKEL 79
                        90       100       110
                ....*....|....*....|....*....|
gi 62860124  80 EAYIQGVLWYNTD-VPKELLDFLkvrHFHK 108
Cdd:cd06875  80 EIYLQTLLSFFQKtMPRELAHFL---DFHK 106
PX_RUN cd07277
The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX ...
2-87 2.19e-10

The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized proteins containing an N-terminal RUN domain and a C-terminal PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction. The RUN domain is found in GTPases in the Rap and Rab families and may play a role in Ras-like signaling pathways.


Pssm-ID: 132810  Cd Length: 118  Bit Score: 55.82  E-value: 2.19e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   2 IDVYIPSVGHQVYKSDkTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKTCKVP---DFPPKR-VPNWMPKVQEQRRQ 77
Cdd:cd07277   1 INVWIPSVFLRGKGSD-AHHVYQVYIRIRDDEWNVYRRYSEFYELHKKLKKKFPVVrsfDFPPKKaIGNKDAKFVEERRK 79
                        90
                ....*....|
gi 62860124  78 GLEAYIQGVL 87
Cdd:cd07277  80 RLQVYLRRVV 89
PX_SNX17_31 cd06885
The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31; The PX domain ...
39-86 2.49e-10

The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Members of this subfamily include sorting nexin 17 (SNX17), SNX31, and similar proteins. They contain an N-terminal PX domain followed by a truncated FERM (4.1, ezrin, radixin, and moesin) domain and a unique C-terminal region. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX17 is known to regulate the trafficking and processing of a number of proteins. It binds some members of the low-density lipoprotein receptor (LDLR) family such as LDLR, VLDLR, ApoER2, and others, regulating their endocytosis. It also binds P-selectin and may regulate its lysosomal degradation. SNX17 is highly expressed in neurons. It binds amyloid precursor protein (APP) and may be involved in its intracellular trafficking and processing to amyloid beta peptide, which plays a central role in the pathogenesis of Alzheimer's disease. The biological function of SNX31 is unknown.


Pssm-ID: 132795  Cd Length: 104  Bit Score: 55.03  E-value: 2.49e-10
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|.
gi 62860124  39 RYSEFHALHKLLKKTC---KVPDFPPKRVPNWMPKVQEQRRQGLEAYIQGV 86
Cdd:cd06885  34 RYSQLHGLNEQLKKEFgnrKLPPFPPKKLLPLTPAQLEERRLQLEKYLQAV 84
PX_CISK cd06870
The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase; The ...
11-106 1.70e-08

The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Cytokine-independent survival kinase (CISK), also called Serum- and Glucocorticoid-induced Kinase 3 (SGK3), plays a role in cell growth and survival. It is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. CISK/SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. N-terminal to a catalytic kinase domain, CISK contains a PX domain which binds highly phosphorylated PIs, directs membrane localization, and regulates the enzyme's activity.


Pssm-ID: 132780  Cd Length: 109  Bit Score: 50.48  E-value: 1.70e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124  11 HQVYKSDKTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKTCkvPD----FPPKRV--PNWMPKVQEQRRQGLEAYIQ 84
Cdd:cd06870  11 DEDREKKKRFTVYKVVVSVGRSSWFVFRRYAEFDKLYESLKKQF--PAsnlkIPGKRLfgNNFDPDFIKQRRAGLDEFIQ 88
                        90       100
                ....*....|....*....|..
gi 62860124  85 GVLWYNtdvpkELLDFLKVRHF 106
Cdd:cd06870  89 RLVSDP-----KLLNHPDVRAF 105
COG5391 COG5391
Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function ...
7-84 2.08e-07

Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only];


Pssm-ID: 227680 [Multi-domain]  Cd Length: 524  Bit Score: 50.18  E-value: 2.08e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   7 PSVGHQVYKSdKTHTVFRvdvLFNGRRHTLDRRYSEFHALHKLLKK---TCKVPDFPPKRV------PNWMPKVQEQRRQ 77
Cdd:COG5391 150 KHTSYEIITV-TNLPSFQ---LRESRPLVVRRRYSDFESLHSILIKllpLCAIPPLPSKKSnseyygDRFSDEFIEERRQ 225

                ....*..
gi 62860124  78 GLEAYIQ 84
Cdd:COG5391 226 SLQNFLR 232
PX_SNX27 cd06886
The phosphoinositide binding Phox Homology domain of Sorting Nexin 27; The PX domain is a ...
2-86 2.48e-07

The phosphoinositide binding Phox Homology domain of Sorting Nexin 27; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX27 contains an N-terminal PDZ domain followed by a PX domain and a Ras-Associated (RA) domain. It binds G protein-gated potassium (Kir3) channels, which play a role in neuronal excitability control, through its PDZ domain. SNX27 downregulates Kir3 channels by promoting their movement in the endosome, reducing surface expression and increasing degradation. SNX27 also associates with 5-hydroxytryptamine type 4 receptor (5-HT4R), cytohesin associated scaffolding protein (CASP), and diacylglycerol kinase zeta, and may play a role in their intracellular trafficking and endocytic recycling. The SNX27 PX domain preferentially binds to phosphatidylinositol-3-phosphate (PI3P) and is important for targeting to the early endosome.


Pssm-ID: 132796  Cd Length: 106  Bit Score: 47.02  E-value: 2.48e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   2 IDVYIPSVGHqVYKSDKTHTVFRVdvlFNGRRHTLDRRYSEFHALHKLLKKtcKVPDFP-PKRVPNWMPKVQEQ----RR 76
Cdd:cd06886   4 VPISIPDYKH-VEQNGEKFVVYNI---YMAGRQLCSRRYREFANLHQNLKK--EFPDFQfPKLPGKWPFSLSEQqldaRR 77
                        90
                ....*....|
gi 62860124  77 QGLEAYIQGV 86
Cdd:cd06886  78 RGLEQYLEKV 87
PX_MDM1p cd06876
The phosphoinositide binding Phox Homology domain of yeast MDM1p; The PX domain is a ...
3-87 2.56e-07

The phosphoinositide binding Phox Homology domain of yeast MDM1p; The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Yeast MDM1p is a filament-like protein localized in punctate structures distributed throughout the cytoplasm. It plays an important role in nuclear and mitochondrial transmission to daughter buds. Members of this subfamily show similar domain architectures as some sorting nexins (SNXs). Some members are similar to SNX19 in that they contain an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. Others are similar to SNX13 and SNX14, which also harbor these three domains as well as a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132786  Cd Length: 133  Bit Score: 47.69  E-value: 2.56e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   3 DVYIPSVGHQVYKSDKTHTVFRVDVLFNGRRHTLD-----RRYSEFHALHKLLKKTC---KVPDFPPKR-VPNWMPKVQ- 72
Cdd:cd06876  21 RVSIQSYISDVEEEGKEFVVYLIEVQRLNNDDQSSgwvvaRRYSEFLELHKYLKKRYpgvLKLDFPQKRkISLKYSKTLl 100
                        90
                ....*....|....*.
gi 62860124  73 -EQRRQGLEAYIQGVL 87
Cdd:cd06876 101 vEERRKALEKYLQELL 116
PX_KIF16B_SNX23 cd06874
The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23; The ...
18-84 1.21e-06

The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. KIF16B, also called sorting nexin 23 (SNX23), is a family-3 kinesin which harbors an N-terminal kinesin motor domain containing ATP and microtubule binding sites, a ForkHead Associated (FHA) domain, and a C-terminal PX domain. The PX domain of KIF16B binds to phosphatidylinositol-3-phosphate (PI3P) in early endosomes and plays a role in the transport of early endosomes to the plus end of microtubules. By regulating early endosome plus end motility, KIF16B modulates the balance between recycling and degradation of receptors. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132784  Cd Length: 127  Bit Score: 45.84  E-value: 1.21e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 62860124  18 KTHTVFRVDVLFNGRRHTLDRRYSEFHALHKLLKKtcKVP-----DFPPKRV-PNWMPKVQEQRRQGLEAYIQ 84
Cdd:cd06874  16 DEHFEFEVKITVLDETWTVFRRYSRFRELHKTMKL--KYPevaalEFPPKKLfGNKSERVAKERRRQLETYLR 86
PX_SNX13 cd06873
The phosphoinositide binding Phox Homology domain of Sorting Nexin 13; The PX domain is a ...
38-101 2.78e-06

The phosphoinositide binding Phox Homology domain of Sorting Nexin 13; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX13, also called RGS-PX1, contains an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs. It specifically binds to the stimulatory subunit of the heterotrimeric G protein G(alpha)s, serving as its GTPase activating protein, through the RGS domain. It preferentially binds phosphatidylinositol-3-phosphate (PI3P) through the PX domain and is localized in early endosomes. SNX13 is involved in endosomal sorting of EGFR into multivesicular bodies (MVB) for delivery to the lysosome.


Pssm-ID: 132783  Cd Length: 120  Bit Score: 44.57  E-value: 2.78e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 62860124  38 RRYSEFHALHKLLKKtcKVPD-----FPPKRVPNWMPK-VQEQRRQGLEAYIQGVLwyNTDVPKE-------LLDFL 101
Cdd:cd06873  45 RRYSDFHDLHMRLKE--KFPNlsklsFPGKKTFNNLDRaFLEKRRKMLNQYLQSLL--NPEVLDAnpglqeiVLDFL 117
PX_SNX1_2_like cd06859
The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2; The PX domain is ...
20-86 7.94e-06

The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily consists of SNX1, SNX2, and similar proteins. They harbor a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain. Both domains have been shown to determine the specific membrane-targeting of SNX1. SNX1 and SNX2 are components of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization of the cargo-recognition subcomplex.


Pssm-ID: 132769 [Multi-domain]  Cd Length: 114  Bit Score: 43.34  E-value: 7.94e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 62860124  20 HTVFRVDV-----LFNGRRHTLDRRYSEFHALHKLLKKTCK---VPDFPPKRVPNwMPKVQ----EQRRQGLEAYIQGV 86
Cdd:cd06859  18 YVVYRVTTktnlpDFKKSEFSVLRRYSDFLWLYERLVEKYPgriVPPPPEKQAVG-RFKVKfefiEKRRAALERFLRRI 95
PX_YPT35 cd07280
The phosphoinositide binding Phox Homology domain of the fungal protein YPT35; The PX domain ...
35-87 1.68e-05

The phosphoinositide binding Phox Homology domain of the fungal protein YPT35; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. This subfamily is composed of YPT35 proteins from the fungal subkingdom Dikarya. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction. The PX domain of YPT35 binds to phosphatidylinositol 3-phosphate (PI3P). It also serves as a protein interaction domain, binding to members of the Yip1p protein family, which localize to the ER and Golgi. YPT35 is mainly associated with endosomes and together with Yip1p proteins, may be involved in a specific function in the endocytic pathway.


Pssm-ID: 132813  Cd Length: 120  Bit Score: 42.31  E-value: 1.68e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 62860124  35 TLDRRYSEFHALHKLLKKTCK------VPDFPPKRV---------PNWMpkvqEQRRQGLEAYIQGVL 87
Cdd:cd07280  40 VAYKRYSEFVQLREALLDEFPrhkrneIPQLPPKVPwydsrvnlnKAWL----EKRRRGLQYFLNCVL 103
PX_SNX16 cd07276
The phosphoinositide binding Phox Homology domain of Sorting Nexin 16; The PX domain is a ...
6-87 1.93e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 16; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX16 contains a central PX domain followed by a coiled-coil region. SNX16 is localized in early and recycling endosomes through the binding of its PX domain to phosphatidylinositol-3-phosphate (PI3P). It plays a role in epidermal growth factor (EGF) signaling by regulating EGF receptor membrane trafficking.


Pssm-ID: 132809  Cd Length: 110  Bit Score: 39.31  E-value: 1.93e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   6 IPSVGHQVYKSDKTHTVFRVDVLFNGRRHTLD-RRYSEFHALHKLLKKTckVPDF----PPKRV--PNWMPKVQEQRRQG 78
Cdd:cd07276   6 PPILGYEVMEERARFTVYKIRVENKVGDSWFVfRRYTDFVRLNDKLKQM--FPGFrlslPPKRWfkDNFDPDFLEERQLG 83

                ....*....
gi 62860124  79 LEAYIQGVL 87
Cdd:cd07276  84 LQAFVNNIM 92
PX_SNX3_like cd06894
The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 and related proteins; The ...
29-86 2.18e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 and related proteins; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily is composed of SNX3, SNX12, and fungal Grd19. Grd19 is involved in the localization of late Golgi membrane proteins in yeast. SNX3/Grp19 associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, and functions as a cargo-specific adaptor for the retromer.


Pssm-ID: 132804  Cd Length: 123  Bit Score: 39.36  E-value: 2.18e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124  29 FNGRRHTLDRRYSEFHALHKLLKKTCK--VPDFPPKRVPNWMP----------KVQEQRRQGLEAYIQGV 86
Cdd:cd06894  33 FKKKESSVRRRYSDFEWLRSELERDSKivVPPLPGKALKRQLPfrgddgifeeEFIEERRKGLETFINKV 102
PX_p40phox cd06882
The phosphoinositide binding Phox Homology domain of the p40phox subunit of NADPH oxidase; The ...
20-87 3.66e-04

The phosphoinositide binding Phox Homology domain of the p40phox subunit of NADPH oxidase; The PX domain is a phosphoinositide binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. p40phox contains an N-terminal PX domain, a central SH3 domain that binds p47phox, and a C-terminal PB1 domain that interacts with p67phox. It is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p40phox positively regulates NADPH oxidase in both phosphatidylinositol-3-phosphate (PI3P)-dependent and PI3P-independent manner. The PX domain is a phospholipid-binding module involved in the membrane targeting of proteins. The p40phox PX domain binds to PI3P, an abundant lipid in phagosomal membranes, playing an important role in the localization of NADPH oxidase. The PX domain of p40phox is also involved in protein-protein interaction.


Pssm-ID: 132792  Cd Length: 123  Bit Score: 38.96  E-value: 3.66e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124  20 HTVFRVDV-LFNGRRHTLDRRYSEFHALHKLLK-----------KTCKVPDFPPKRVPNWMPKVQEQRRQGLEAYIQGVL 87
Cdd:cd06882  20 YYVFVIEVkTKGGSKYLIYRRYRQFFALQSKLEerfgpeagssaYDCTLPTLPGKIYVGRKAEIAERRIPLLNRYMKELL 99
PX_Grd19 cd07295
The phosphoinositide binding Phox Homology domain of fungal Grd19; The PX domain is a ...
29-86 3.72e-04

The phosphoinositide binding Phox Homology domain of fungal Grd19; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Grd19 is involved in the localization of late Golgi membrane proteins in yeast. Grp19 associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, and functions as a cargo-specific adaptor for the retromer.


Pssm-ID: 132828  Cd Length: 116  Bit Score: 38.63  E-value: 3.72e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 62860124  29 FNGRRHTLDRRYSEFHALHKLLKKT---CKVPDFPPKRVPN-WMPKVQEQRRQGLEAYIQGV 86
Cdd:cd07295  33 FKLRVSSVRRRYSDFEYFRDILEREsprVMIPPLPGKIFTNrFSDEVIEERRQGLETFLQSV 94
PX_SNX4 cd06864
The phosphoinositide binding Phox Homology domain of Sorting Nexin 4; The PX domain is a ...
34-86 4.27e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 4; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX4 is involved in recycling traffic from the sorting endosome (post-Golgi endosome) back to the late Golgi. It shows a similar domain architecture as SNX1-2, among others, containing a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain. SNX4 is implicated in the regulation of plasma membrane receptor trafficking and interacts with receptors for EGF, insulin, platelet-derived growth factor and the long form of the leptin receptor.


Pssm-ID: 132774  Cd Length: 129  Bit Score: 38.50  E-value: 4.27e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62860124  34 HTLDRRYSEFHALHKLLKKT---CKVPDFPPKRVP---------NWMPKVQEQRRQGLEAYIQGV 86
Cdd:cd06864  46 SSLWRRYSEFELLRNYLVVTypyVIVPPLPEKRAMfmwqklssdTFDPDFVERRRAGLENFLLRV 110
PX_SNX10 cd06898
The phosphoinositide binding Phox Homology domain of Sorting Nexin 10; The PX domain is a ...
35-87 7.64e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 10; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX10 may be involved in the regulation of endosome homeostasis. Its expression induces the formation of giant vacuoles in mammalian cells.


Pssm-ID: 132808  Cd Length: 113  Bit Score: 37.70  E-value: 7.64e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 62860124  35 TLDRRYSEFHALHKLLKKTC---KVPDFPPKRVPNWM--PKVQEQRRQGLEAYIQGVL 87
Cdd:cd06898  38 CVRRRYSEFVWLRNRLQKNAlliQLPSLPPKNLFGRFnnEGFIEERQQGLQDFLEKVL 95
PX_MONaKA cd06871
The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase; The PX domain ...
38-87 1.23e-03

The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. MONaKA (Modulator of Na,K-ATPase) binds the plasma membrane ion transporter, Na,K-ATPase, and modulates its enzymatic and ion pump activities. It modulates brain Na,K-ATPase and may be involved in regulating electrical excitability and synaptic transmission. MONaKA contains an N-terminal PX domain and a C-terminal catalytic kinase domain. The PX domain interacts with PIs and plays a role in targeting proteins to PI-enriched membranes.


Pssm-ID: 132781  Cd Length: 120  Bit Score: 37.34  E-value: 1.23e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|.
gi 62860124  38 RRYSEFHALHKLLKKTCKVPDFPPKRV-PNWMPKVQEQRRQGLEAYIQGVL 87
Cdd:cd06871  42 RRYNDFDLLNASLQISGISLPLPPKKLiGNMDREFIAERQQGLQNYLNVIL 92
PX_SNX41_42 cd06867
The phosphoinositide binding Phox Homology domain of fungal Sorting Nexins 41 and 42; The PX ...
34-62 1.42e-03

The phosphoinositide binding Phox Homology domain of fungal Sorting Nexins 41 and 42; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX41 and SNX42 (also called Atg20p) form dimers with SNX4, and are required in protein recycling from the sorting endosome (post-Golgi endosome) back to the late Golgi in yeast.


Pssm-ID: 132777  Cd Length: 112  Bit Score: 36.84  E-value: 1.42e-03
                        10        20        30
                ....*....|....*....|....*....|..
gi 62860124  34 HTLDRRYSEFHALHKLLKK---TCKVPDFPPK 62
Cdd:cd06867  28 SEVKRRYSEFESLRKNLTRlypTLIIPPIPEK 59
PX_SNX25 cd06878
The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a ...
38-87 2.17e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. The function of SNX25 is not yet known. It has been found in exosomes from human malignant pleural effusions. SNX25 shows the same domain architecture as SNX13 and SNX14, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs.


Pssm-ID: 132788  Cd Length: 127  Bit Score: 36.58  E-value: 2.17e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 62860124  38 RRYSEFHALHKLLK------KTCKVPDFPPKRVPNWMPKVQEQRRQGLEAYIQGVL 87
Cdd:cd06878  54 RKLSEFHDLHRKLKecsswlKKVELPSLSKKWFKSIDKKFLDKSKNQLQKYLQFIL 109
PX_SNX8_Mvp1p_like cd06866
The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p; The PX ...
20-83 2.40e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX8 and the yeast counterpart Mvp1p are involved in sorting and delivery of late-Golgi proteins, such as carboxypeptidase Y, to vacuoles.


Pssm-ID: 132776  Cd Length: 105  Bit Score: 36.05  E-value: 2.40e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 62860124  20 HTVFRV-DVLFNGrrhTLDRRYSEFHALHK-LLKKTC--KVPDFPPKRVPNWM-PKVQEQRRQGLEAYI 83
Cdd:cd06866  18 HVEYEVsSKRFKS---TVYRRYSDFVWLHEyLLKRYPyrMVPALPPKRIGGSAdREFLEARRRGLSRFL 83
PX_SNX14 cd06877
The phosphoinositide binding Phox Homology domain of Sorting Nexin 14; The PX domain is a ...
4-87 3.45e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 14; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX14 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. It is expressed in the embryonic nervous system of mice, and is co-expressed in the motoneurons and the anterior pituary with Islet-1. SNX14 shows a similar domain architecture as SNX13, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs.


Pssm-ID: 132787  Cd Length: 119  Bit Score: 35.82  E-value: 3.45e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124   4 VYIPSVGHQVYKS-DKTHTVF-----RVDVLFNG---RRHTLDRRYSEFHALH-KLLKKTCKVPD--FPPKRVPNWMPKV 71
Cdd:cd06877   5 VSIPYVEMRRDPSnGERIYVFcieveRNDRRAKGhepQHWSVLRRYNEFYVLEsKLTEFHGEFPDapLPSRRIFGPKSYE 84
                        90
                ....*....|....*..
gi 62860124  72 Q-EQRRQGLEAYIQGVL 87
Cdd:cd06877  85 FlESKREIFEEFLQKLL 101
PX_UP2_fungi cd06869
The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins; The PX ...
38-102 3.68e-03

The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized fungal proteins containing a PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction.


Pssm-ID: 132779  Cd Length: 119  Bit Score: 35.72  E-value: 3.68e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62860124  38 RRYSEFHALHKLLKKtckvpDFPPKRVPNWMPK---VQEQRRQGLEAYIQGVLwYNTDV--PKELLDFLK 102
Cdd:cd06869  54 RRYSDFKKLHHDLKK-----EFPGKKLPKLPHKdklPREKLRLSLRQYLRSLL-KDPEVahSSILQEFLT 117
PX_UP1_plant cd06879
The phosphoinositide binding Phox Homology domain of uncharacterized plant proteins; The PX ...
38-87 7.59e-03

The phosphoinositide binding Phox Homology domain of uncharacterized plant proteins; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized fungal proteins containing a PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction.


Pssm-ID: 132789  Cd Length: 138  Bit Score: 35.38  E-value: 7.59e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 62860124  38 RRYSEFHALHKLLKKTckvpdFPPKRVPNWMPK---------VQEQRRQGLEAYIQGVL 87
Cdd:cd06879  67 RRFNDFLKLHTDLKKL-----FPKKKLPAAPPKgllrmknraLLEERRHSLEEWMGKLL 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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