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Conserved domains on  [gi|4504009|ref|NP_000160|]
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alpha-galactosidase A isoform b precursor [Homo sapiens]

Protein Classification

alpha-galactosidase( domain architecture ID 13873254)

alpha-galactosidase hydrolyses the terminal alpha-galactosyl moieties from glycolipids and glycoproteins

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
Melibiase_2 pfam16499
Alpha galactosidase A;
39-322 0e+00

Alpha galactosidase A;


:

Pssm-ID: 374582 [Multi-domain]  Cd Length: 284  Bit Score: 607.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009     39 TPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIR 118
Cdd:pfam16499   1 TPPMGWLHWERFRCNIDCDDDPENCISEQLFMQMADRMAEDGWKDAGYEYVCIDDCWMSKERDKQGRLQADPKRFPSGIK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    119 QLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcDSLENLADGYKHMSLALNRTGRSI 198
Cdd:pfam16499  81 KLADYVHSKGLKLGIYADVGTKTCAGYPGSLGYYDIDAKTFADWGVDLLKFDGCY-SNLEDLVEGYPNMSFALNKTGRPI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    199 VYSCEWPLYM-WPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSW 277
Cdd:pfam16499 160 VYSCEWPLYMgGLPQQVNYTEIRKYCNHWRNYDDIQDSWDSVKSIVDWFADNQDVFVPAAGPGGWNDPDMLIIGNFGLSY 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 4504009    278 NQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 322
Cdd:pfam16499 240 DQQRTQMALWAIMAAPLFMSNDLRSISPEAKAILQNKDVIAINQD 284
Melibiase_2_C pfam17450
Alpha galactosidase A C-terminal beta sandwich domain;
325-411 6.16e-42

Alpha galactosidase A C-terminal beta sandwich domain;


:

Pssm-ID: 407508 [Multi-domain]  Cd Length: 86  Bit Score: 142.87  E-value: 6.16e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    325 GKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKrKLGFYEWTSRLR 404
Cdd:pfam17450   1 GKQGRRLKKKDNIEVWERPLSDNSLAVAVLNRREIGMPYRYTLSLAKLGYGKVCSPACNVTDIFPGK-KLGVFELTSNLV 79

                  ....*..
gi 4504009    405 SHINPTG 411
Cdd:pfam17450  80 VSVNPTG 86
 
Name Accession Description Interval E-value
Melibiase_2 pfam16499
Alpha galactosidase A;
39-322 0e+00

Alpha galactosidase A;


Pssm-ID: 374582 [Multi-domain]  Cd Length: 284  Bit Score: 607.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009     39 TPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIR 118
Cdd:pfam16499   1 TPPMGWLHWERFRCNIDCDDDPENCISEQLFMQMADRMAEDGWKDAGYEYVCIDDCWMSKERDKQGRLQADPKRFPSGIK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    119 QLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcDSLENLADGYKHMSLALNRTGRSI 198
Cdd:pfam16499  81 KLADYVHSKGLKLGIYADVGTKTCAGYPGSLGYYDIDAKTFADWGVDLLKFDGCY-SNLEDLVEGYPNMSFALNKTGRPI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    199 VYSCEWPLYM-WPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSW 277
Cdd:pfam16499 160 VYSCEWPLYMgGLPQQVNYTEIRKYCNHWRNYDDIQDSWDSVKSIVDWFADNQDVFVPAAGPGGWNDPDMLIIGNFGLSY 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 4504009    278 NQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 322
Cdd:pfam16499 240 DQQRTQMALWAIMAAPLFMSNDLRSISPEAKAILQNKDVIAINQD 284
GH27 cd14792
glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and ...
40-322 4.46e-141

glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.


Pssm-ID: 269893 [Multi-domain]  Cd Length: 271  Bit Score: 403.86  E-value: 4.46e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   40 PTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQ 119
Cdd:cd14792   1 PPMGWNSWNAFGCN----------INEKLIKATADAMVSSGLRDAGYEYVNIDDGWQAKRRDADGRLVPDPTRFPSGMKA 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  120 LANYVHSKGLKLGIYADVGNKTCA--GFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSL-ENLADGYKHMSLALNRTGR 196
Cdd:cd14792  71 LADYVHSKGLKFGIYSDAGTPTCAdgGYPGSLGHEDSDAATFASWGVDYLKYDGCGAPSGrLDAQERYTAMSDALNATGR 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  197 SIVYSCEWPLYMwpfqkPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVdVAGPGGWNDPDMLVIGNFGL- 275
Cdd:cd14792 151 PIVLSLSWWGYP-----DPWGWAAEIANSWRTTGDIWDSWTSVLSIIDQFADLAEYAA-PAGPGHWNDPDMLEVGNGGLg 224
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4504009  276 SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 322
Cdd:cd14792 225 TDDEQRTHFSLWAIMASPLILGNDLRNLDDETLALLTNPEVIAVNQD 271
PLN02808 PLN02808
alpha-galactosidase
32-356 3.30e-97

alpha-galactosidase


Pssm-ID: 166449 [Multi-domain]  Cd Length: 386  Bit Score: 296.49  E-value: 3.30e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    32 LDNGLARTPTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 111
Cdd:PLN02808  24 LDNGLGLTPQMGWNSWNHFQCN----------INETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKAS 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   112 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENlADGYKHMSLA 190
Cdd:PLN02808  94 TFPSGIKALADYVHSKGLKLGIYSDAGTLTCSKtMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSP-QERYPKMSKA 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   191 LNRTGRSIVYS-CEWPlymwpfQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILD----WTSFnqerivdvAGPGGWNDP 265
Cdd:PLN02808 173 LLNSGRPIFFSlCEWG------QEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADqndrWASY--------ARPGGWNDP 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   266 DMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLS 345
Cdd:PLN02808 239 DMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGDLEVWAGPLS 318
                        330
                 ....*....|.
gi 4504009   346 GLAWAVAMINR 356
Cdd:PLN02808 319 KKRVAVVLWNR 329
Melibiase_2_C pfam17450
Alpha galactosidase A C-terminal beta sandwich domain;
325-411 6.16e-42

Alpha galactosidase A C-terminal beta sandwich domain;


Pssm-ID: 407508 [Multi-domain]  Cd Length: 86  Bit Score: 142.87  E-value: 6.16e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    325 GKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKrKLGFYEWTSRLR 404
Cdd:pfam17450   1 GKQGRRLKKKDNIEVWERPLSDNSLAVAVLNRREIGMPYRYTLSLAKLGYGKVCSPACNVTDIFPGK-KLGVFELTSNLV 79

                  ....*..
gi 4504009    405 SHINPTG 411
Cdd:pfam17450  80 VSVNPTG 86
GalA COG3345
Alpha-galactosidase [Carbohydrate transport and metabolism];
29-134 1.56e-13

Alpha-galactosidase [Carbohydrate transport and metabolism];


Pssm-ID: 442574 [Multi-domain]  Cd Length: 219  Bit Score: 69.62  E-value: 1.56e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   29 ARALDNGLARTPTMGWLHWERFmcnldcqeEPDscISEKLFMEMAELMvsegwKDAGYEYLCIDDCWMAPQRD---SEGR 105
Cdd:COG3345  23 ARLAPGPPDKPRPVGWNSWEAY--------YFD--FTEEKLLALADAA-----AELGVELFVLDDGWFGGRRDdtaGLGD 87
                        90       100
                ....*....|....*....|....*....
gi 4504009  106 LQADPQRFPHGIRQLANYVHSKGLKLGIY 134
Cdd:COG3345  88 WLVDPEKFPNGLKPLADRIHALGMKFGLW 116
 
Name Accession Description Interval E-value
Melibiase_2 pfam16499
Alpha galactosidase A;
39-322 0e+00

Alpha galactosidase A;


Pssm-ID: 374582 [Multi-domain]  Cd Length: 284  Bit Score: 607.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009     39 TPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIR 118
Cdd:pfam16499   1 TPPMGWLHWERFRCNIDCDDDPENCISEQLFMQMADRMAEDGWKDAGYEYVCIDDCWMSKERDKQGRLQADPKRFPSGIK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    119 QLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcDSLENLADGYKHMSLALNRTGRSI 198
Cdd:pfam16499  81 KLADYVHSKGLKLGIYADVGTKTCAGYPGSLGYYDIDAKTFADWGVDLLKFDGCY-SNLEDLVEGYPNMSFALNKTGRPI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    199 VYSCEWPLYM-WPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSW 277
Cdd:pfam16499 160 VYSCEWPLYMgGLPQQVNYTEIRKYCNHWRNYDDIQDSWDSVKSIVDWFADNQDVFVPAAGPGGWNDPDMLIIGNFGLSY 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 4504009    278 NQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 322
Cdd:pfam16499 240 DQQRTQMALWAIMAAPLFMSNDLRSISPEAKAILQNKDVIAINQD 284
GH27 cd14792
glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and ...
40-322 4.46e-141

glycosyl hydrolase family 27 (GH27); GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.


Pssm-ID: 269893 [Multi-domain]  Cd Length: 271  Bit Score: 403.86  E-value: 4.46e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   40 PTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQ 119
Cdd:cd14792   1 PPMGWNSWNAFGCN----------INEKLIKATADAMVSSGLRDAGYEYVNIDDGWQAKRRDADGRLVPDPTRFPSGMKA 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  120 LANYVHSKGLKLGIYADVGNKTCA--GFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSL-ENLADGYKHMSLALNRTGR 196
Cdd:cd14792  71 LADYVHSKGLKFGIYSDAGTPTCAdgGYPGSLGHEDSDAATFASWGVDYLKYDGCGAPSGrLDAQERYTAMSDALNATGR 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  197 SIVYSCEWPLYMwpfqkPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVdVAGPGGWNDPDMLVIGNFGL- 275
Cdd:cd14792 151 PIVLSLSWWGYP-----DPWGWAAEIANSWRTTGDIWDSWTSVLSIIDQFADLAEYAA-PAGPGHWNDPDMLEVGNGGLg 224
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4504009  276 SWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQD 322
Cdd:cd14792 225 TDDEQRTHFSLWAIMASPLILGNDLRNLDDETLALLTNPEVIAVNQD 271
PLN02808 PLN02808
alpha-galactosidase
32-356 3.30e-97

alpha-galactosidase


Pssm-ID: 166449 [Multi-domain]  Cd Length: 386  Bit Score: 296.49  E-value: 3.30e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    32 LDNGLARTPTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 111
Cdd:PLN02808  24 LDNGLGLTPQMGWNSWNHFQCN----------INETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKAS 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   112 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENlADGYKHMSLA 190
Cdd:PLN02808  94 TFPSGIKALADYVHSKGLKLGIYSDAGTLTCSKtMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSP-QERYPKMSKA 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   191 LNRTGRSIVYS-CEWPlymwpfQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILD----WTSFnqerivdvAGPGGWNDP 265
Cdd:PLN02808 173 LLNSGRPIFFSlCEWG------QEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADqndrWASY--------ARPGGWNDP 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   266 DMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLS 345
Cdd:PLN02808 239 DMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGDLEVWAGPLS 318
                        330
                 ....*....|.
gi 4504009   346 GLAWAVAMINR 356
Cdd:PLN02808 319 KKRVAVVLWNR 329
PLN02229 PLN02229
alpha-galactosidase
28-356 2.75e-95

alpha-galactosidase


Pssm-ID: 177874 [Multi-domain]  Cd Length: 427  Bit Score: 292.61  E-value: 2.75e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    28 GARALDNGLARTPTMGWLHWERFMCNldcqeepdscISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQ 107
Cdd:PLN02229  51 GRLQLNNGLARTPQMGWNSWNFFACN----------INETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLV 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   108 ADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYcdsleNLA----DG 183
Cdd:PLN02229 121 PDPKTFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDNCY-----NLGikpiER 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   184 YKHMSLALNRTGRSIVYS-CEWPL---YMWPfqkpnyteiRQYCNHWRNFADIDDSWKSIKSILD----WTSFnqerivd 255
Cdd:PLN02229 196 YPPMRDALNATGRSIFYSlCEWGVddpALWA---------GKVGNSWRTTDDINDTWASMTTIADlnnkWAAY------- 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   256 vAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLR-QG 334
Cdd:PLN02229 260 -AGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETMEILSNKEVIAVNQDPLGVQGRKIQaNG 338
                        330       340
                 ....*....|....*....|....
gi 4504009   335 DN--FEVWERPLSGLAWAVAMINR 356
Cdd:PLN02229 339 KNgcQQVWAGPLSGDRLVVALWNR 362
PLN02692 PLN02692
alpha-galactosidase
32-368 4.58e-92

alpha-galactosidase


Pssm-ID: 178295 [Multi-domain]  Cd Length: 412  Bit Score: 283.85  E-value: 4.58e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    32 LDNGLARTPTMGWLHWERFMCNLDcqeepdscisEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 111
Cdd:PLN02692  48 LANGLGITPPMGWNSWNHFSCKID----------EKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPKKS 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   112 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAG-FPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENlADGYKHMSLA 190
Cdd:PLN02692 118 TFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKtMPGSLGHEEQDAKTFASWGIDYLKYDNCNNDGSKP-TVRYPVMTRA 196
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   191 LNRTGRSIVYS-CEW----PLyMWPfqkpnyteiRQYCNHWRNFADIDDSWKSIKSILDWtsfnQERIVDVAGPGGWNDP 265
Cdd:PLN02692 197 LMKAGRPIFFSlCEWgdmhPA-LWG---------SKVGNSWRTTNDISDTWDSMISRADM----NEVYAELARPGGWNDP 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   266 DMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLS 345
Cdd:PLN02692 263 DMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIVANKEVIAVNQDPLGVQAKKVRMEGDLEIWAGPLS 342
                        330       340
                 ....*....|....*....|...
gi 4504009   346 GLAWAVAMINRqeigGPRSYTIA 368
Cdd:PLN02692 343 GYRVALLLLNR----GPWRNSIT 361
GH_D cd14790
Glycoside hydrolases, clan D; This group of glycosyl hydrolase families is comprised of ...
40-317 1.32e-48

Glycoside hydrolases, clan D; This group of glycosyl hydrolase families is comprised of glycosyl hydrolase family 31 (GH31), family 36 (GH36), and family 27 (GH27). These structurally and mechanistically related protein families are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. They have a wide range of functions including alpha-glucosidase, alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase, alpha-N-acetylgalactosaminidase, stachyose synthase, raffinose synthase, and alpha-1,4-glucan lyase.


Pssm-ID: 269891 [Multi-domain]  Cd Length: 253  Bit Score: 166.26  E-value: 1.32e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   40 PTMGWLHWERFMcnldcqeepdSCISEKLFMEMAELMVSEGWkdaGYEYLCIDDCWMApqRDSEGRLQADPQRFPHGiRQ 119
Cdd:cd14790   1 PPMGWLTWERYR----------QDIDEMLFMEMADRIAEDEL---PYKVFNIDDCWAK--KDAEGDFVPDPERFPRG-EA 64
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  120 LANYVHSKGLKLGIYADvgnktcagfPGSFGYYDIDAQTFADWGVDLLKFDGCYC-----------DSLENLADGYKHMS 188
Cdd:cd14790  65 MARRLHARGLKLGIWGD---------PFRLDWVEDDLQTLAEWGVDMFKLDFGESsgtpvqwfpqkMPNKEQAQGYEQMA 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  189 LALNRTGRSIVYSCEWPLYMWPFQKpnyteirqyCNHWRNFADIDDSWKSIKSILDWTSFNQerIVDVAGPGGWNDPDML 268
Cdd:cd14790 136 RALNATGEPIVYSGSWSAYQGGGEI---------CNLWRNYDDIQDSWDAVLSIVDWFFTNQ--DVLQAGGFHFNDPDML 204
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 4504009  269 VIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVI 317
Cdd:cd14790 205 IIGNFGLSAEQSRSQMALWTIMDAPLLMSTDLSTISPSDKKILVNRLMI 253
Melibiase_2_C pfam17450
Alpha galactosidase A C-terminal beta sandwich domain;
325-411 6.16e-42

Alpha galactosidase A C-terminal beta sandwich domain;


Pssm-ID: 407508 [Multi-domain]  Cd Length: 86  Bit Score: 142.87  E-value: 6.16e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    325 GKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKrKLGFYEWTSRLR 404
Cdd:pfam17450   1 GKQGRRLKKKDNIEVWERPLSDNSLAVAVLNRREIGMPYRYTLSLAKLGYGKVCSPACNVTDIFPGK-KLGVFELTSNLV 79

                  ....*..
gi 4504009    405 SHINPTG 411
Cdd:pfam17450  80 VSVNPTG 86
PLN03231 PLN03231
putative alpha-galactosidase; Provisional
64-330 6.44e-24

putative alpha-galactosidase; Provisional


Pssm-ID: 178770 [Multi-domain]  Cd Length: 357  Bit Score: 101.98  E-value: 6.44e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    64 ISEKLFMEMAELmVSEGWKDAGYEYLCIDDCWMAPQR----------------DSEGRLQADPQRFP-----HGIRQLAN 122
Cdd:PLN03231  15 ISEEQFLENAKI-VSETLKPHGYEYVVIDYLWYRKLKhgwfktsakspgydliDKWGRPLPDPKRWPsttggKGFAPIAA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   123 YVHSKGLKLGIY-------ADVGNKT------------------------CAGFPGSFGYYDIDAQ-----------TFA 160
Cdd:PLN03231  94 KVHALGLKLGIHvmrgistTAVKKKTpilgafksnghawnakdialmdqaCPWMQQCFVGVNTSSEggklfiqslydQYA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   161 DWGVDLLKFDGCYCDSLENLaDGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKpnyTEIRQYCNHWRNFADIDDSWKSIK 240
Cdd:PLN03231 174 SWGIDFIKHDCVFGAENPQL-DEILTVSKAIRNSGRPMIYSLSPGDGATPGLA---ARVAQLVNMYRVTGDDWDDWKYLV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   241 SILDWT-SFNQERIVDVAGPGG---WNDPDMLVIG-------------NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHI 303
Cdd:PLN03231 250 KHFDVArDFAAAGLIAIPSVVGgksWVDLDMLPFGrltdpaaaygpyrNSRLSLEEKKTQMTLWAVAKSPLMFGGDLRRL 329
                        330       340
                 ....*....|....*....|....*..
gi 4504009   304 SPQAKALLQDKDVIAINQDPLGKQGYQ 330
Cdd:PLN03231 330 DNETLSLLTNPTVLEVNSHSTGNRNAQ 356
PLN02899 PLN02899
alpha-galactosidase
18-320 9.46e-24

alpha-galactosidase


Pssm-ID: 178487 [Multi-domain]  Cd Length: 633  Bit Score: 103.72  E-value: 9.46e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    18 FLALVSWDIPGARAldnGLARTPTMGWLHWERFmcnldcqeepdsC--ISEKLFMEMAELmVSEGWKDAGYEYLCIDDCW 95
Cdd:PLN02899  12 LLSLSLWIGASSQQ---QLASFPPRGWNSYDSF------------SwiVSEEEFLQNAEI-VSQRLLPFGYEYVVVDYLW 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009    96 MAPQR-------------DSEGRLQADPQRFP-----HGIRQLANYVHSKGLKLGIY----------------------- 134
Cdd:PLN02899  76 YRKKVegayvdslgfdviDEWGRPIPDPGRWPssrggKGFTEVAEKVHAMGLKFGIHvmrgistqavnantpildavkgg 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   135 -----------ADVG--NKTCAGFPGSFGYYDIDA-----------QTFADWGVDLLKFDGCYCDSLEnlADGYKHMSLA 190
Cdd:PLN02899 156 ayeesgrqwraKDIAlkERACAWMSHGFMSVNTKLgagkaflrslyDQYAEWGVDFVKHDCVFGDDFD--LEEITYVSEV 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   191 LNRTGRSIVYSCEWPLYMWPFQKpnyTEIRQYCNHWRNFADIDDSWKSIKSILDWT-SFNQERIVDVAGPGG--WNDPDM 267
Cdd:PLN02899 234 LKELDRPIVYSLSPGTSATPTMA---KEVSGLVNMYRITGDDWDTWGDVAAHFDVSrDFAAAGLIGAKGLRGrsWPDLDM 310
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 4504009   268 LVIG-------NFG------LSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAIN 320
Cdd:PLN02899 311 LPLGwltdpgsNVGphracnLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLITNPTLLEIN 376
GalA COG3345
Alpha-galactosidase [Carbohydrate transport and metabolism];
29-134 1.56e-13

Alpha-galactosidase [Carbohydrate transport and metabolism];


Pssm-ID: 442574 [Multi-domain]  Cd Length: 219  Bit Score: 69.62  E-value: 1.56e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   29 ARALDNGLARTPTMGWLHWERFmcnldcqeEPDscISEKLFMEMAELMvsegwKDAGYEYLCIDDCWMAPQRD---SEGR 105
Cdd:COG3345  23 ARLAPGPPDKPRPVGWNSWEAY--------YFD--FTEEKLLALADAA-----AELGVELFVLDDGWFGGRRDdtaGLGD 87
                        90       100
                ....*....|....*....|....*....
gi 4504009  106 LQADPQRFPHGIRQLANYVHSKGLKLGIY 134
Cdd:COG3345  88 WLVDPEKFPNGLKPLADRIHALGMKFGLW 116
GH36 cd14791
glycosyl hydrolase family 36 (GH36); GH36 enzymes occur in prokaryotes, eukaryotes, and ...
43-313 8.24e-13

glycosyl hydrolase family 36 (GH36); GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.


Pssm-ID: 269892 [Multi-domain]  Cd Length: 299  Bit Score: 68.79  E-value: 8.24e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009   43 GWLHWERFMCNldcqeepdscISEKLFMEMAELMvsegwKDAGYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQ 119
Cdd:cd14791   5 GWNSWYAYYFD----------ITEEKLLELADAA-----AELGVELFVIDDGWFGARNDDYAGLgdwLVDPEKFPDGLKA 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  120 LANYVHSKGLKLGI-----YADVGNKTCAGFP------------GSFGYY--DI---DAQTF---------ADWGVDLLK 168
Cdd:cd14791  70 LADRIHALGMKFGLwlepeMVGPDSELYREHPdwllkdpggppvTGRNQYvlDLsnpEVRDYlrevidrllREWGIDYLK 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  169 FDGCY------CDSLENLADGYKHMSLAL--------NRTGRSIVYSC--EWPLYMWPfqkpnyteIRQYCNHWRnFADI 232
Cdd:cd14791 150 WDFNRagaeggSRALDSQGEGLHRYVEALyrlldrlrEAFPDVLIEGCssGGGRPDLG--------MLGYVDQFR-ISDN 220
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4504009  233 DDSwKSIKSILDWTSFnqerivdvAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQ 312
Cdd:cd14791 221 TDA-LERLRIQAGRSL--------LYPPEAMDPDVVLLPNHQTGRLEPLETRAAVAMLGGRLGLSDDLTKLSEEELELLK 291

                .
gi 4504009  313 D 313
Cdd:cd14791 292 E 292
Melibiase pfam02065
Melibiase; Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan ...
82-134 1.77e-05

Melibiase; Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27.


Pssm-ID: 307952  Cd Length: 347  Bit Score: 46.62  E-value: 1.77e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 4504009     82 KDAGYEYLCIDDCWMAPQRDSEGRL---QADPQRFPHGIRQLANYVHSKGLKLGIY 134
Cdd:pfam02065  68 ADLGIELFVLDDGWFGHRNDDNSSLgdwFVNPRKFPNGLDPLAKQVHALGMQFGLW 123
Melibiase_C pfam17801
Alpha galactosidase C-terminal beta sandwich domain; This domain is found at the C-terminus of ...
334-373 2.58e-03

Alpha galactosidase C-terminal beta sandwich domain; This domain is found at the C-terminus of alpha galactosidase enzymes.


Pssm-ID: 465512 [Multi-domain]  Cd Length: 74  Bit Score: 36.46  E-value: 2.58e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 4504009    334 GDNFEVWERPLSGLAWAVAMINRqeiGGPRSYTIAVASLG 373
Cdd:pfam17801   1 DGDLQVWAKPLSNGDVAVALFNR---GGPSTVTVDLSDLG 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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