|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.01e-163 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 460.83 E-value: 1.01e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 1 MNPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 81 TGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTSMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 241 NAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 992329277 321 TNTIIAILTTVSITLLPISPLIPTTI 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
5.84e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 387.74 E-value: 5.84e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 1 MNPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 81 TGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTSMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 241 NAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|..
gi 992329277 321 TNTIIAILTTVSITLLPISPLI 342
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTI 342
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
1.47e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 386.85 E-value: 1.47e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 1 MNPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 81 TGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPAlNPTLLTSMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 241 NAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|...
gi 992329277 321 TNTI-IAILTTVSITLLPISPLI 342
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAI 342
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
1.82e-117 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 343.37 E-value: 1.82e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 1 MNPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 81 TGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTSMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 241 NAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATITLPPhTTNHMK-QWH-TN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQfEN 319
|
330 340
....*....|....*....|....
gi 992329277 319 KSTNTIIAILTTVSITLLPISPLI 342
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPML 343
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
1.39e-100 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 300.35 E-value: 1.39e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 1 MNPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 81 TGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTSMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 241 NAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|..
gi 992329277 321 TNTIIAILTTVSITLLPISPLI 342
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQL 342
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-346 |
1.42e-80 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 249.46 E-value: 1.42e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 1 MNPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 81 TGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTSMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 241 NAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKS 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|....*.
gi 992329277 321 TNTIIAILTTVSITLLPISPLIPTTI 346
Cdd:MTH00041 321 ITVYGVILSILSSISILGLLLIPLFL 346
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
2.09e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 194.27 E-value: 2.09e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 1 MNPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 81 tgqwdITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTspaLNPTLLTSMAIL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 241 NAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATITLPPHTTNHMKQwhTNKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNK 310
|
330 340
....*....|....*....|..
gi 992329277 321 TNTIIAILTTVSITLLPISPLI 342
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
1.63e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 165.83 E-value: 1.63e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 5 AKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 85 DITqlthptscLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLL--FMTSPALNPTLLTsMAILST 162
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsnFLDLYWLAYLLCV-ISVLSA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 163 ALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLmtTWTKAPSLNA 242
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL--GSLKPSYKTG 233
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 992329277 243 MLLLTLLSLAG-LPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYCATI 302
Cdd:MTH00144 234 LSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-337 |
3.59e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 159.95 E-value: 3.59e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 7 LIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSmtnawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 87 TQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTSMAILSTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 167 WMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTLMTTWTKAPSLNAMLLL 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 247 TLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAYcATITLPPHTTNHMKQWHTNKstNTIIA 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSLKSAPYEPK--TKILI 319
|
330
....*....|.
gi 992329277 327 ILTTVSITLLP 337
Cdd:MTH00011 320 SMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-298 |
8.04e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.59 E-value: 8.04e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 8 IFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 88 qLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPalNPTLLTSMAILSTALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 168 MGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLSTlMTTWTKAPSLNAMLLLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQ-QYSNPESMSSNLVFLGL 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 992329277 248 LLSLAG-LPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAY 298
Cdd:MTH00197 232 SFLSLGgLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
3.85e-27 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 110.98 E-value: 3.85e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 14 LLGTTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLF-SSMTNAWhTGQWDITQL-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 90 ---THPTSCLILTTAIAM-------KLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKL----PPITLLFMTSPALNP---T 152
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 153 LLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTI-IISYNPK-LTLLNFYL--YTLMTAAVFLTL--------N 220
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVIlllsrkggE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 992329277 221 STNTSKLSTLmttWTKAPSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEDLAGL---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
2.17e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 107.81 E-value: 2.17e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 13 LLLGTTITISSNHWITAWAGLEINTLAILPLI-SKSHHPRAIEAATKYFLTQAAASALVLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 79 WHTGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNptLLTSMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 159 ILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNP----KLTLLNFYLYTLMTAAVFLTLNSTNTSK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*
gi 992329277 233 TWTKAPSLNAMLLLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
8.00e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 104.70 E-value: 8.00e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 23 SNHWITAWAGLEINTLAILPLI-SKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 91 HPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPT------LLTSMAILSTAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 165 GGWMGLNQTQIRKILAFSSISHLGWMTIIIS----YNPKLTLLNFYLYTLMTAAVFLTLNSTNTSKLST-----LMTTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 992329277 236 KAPSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.22e-23 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 101.05 E-value: 1.22e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 14 LLGTTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVL--------------FSSMTNA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 79 WHTGQWDITQLThpTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKL----PPITLLFMTSPALNPT-- 152
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 153 -LLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTL--LNFYL--YTLMTAAVFLTL-------- 219
Cdd:PRK05777 271 qVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVIsllrrkgg 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 992329277 220 NSTNTSKLSTLMTTwtkAPSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRL 296
Cdd:PRK05777 351 EAESISDFAGLSKR---SPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
3.44e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 99.64 E-value: 3.44e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 14 LLGTTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 93 TSCLILT------------TAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLP---PITLLFMT-----SPALNPT 152
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLYilfgfSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 153 LLTsMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLN--FYL--YTLMTAAVFLTLNSTNTSK-- 226
Cdd:TIGR01770 272 LAI-IAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLSLLRSYKde 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 992329277 227 ----LSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLA 297
Cdd:TIGR01770 351 wieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-267 |
8.22e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 98.55 E-value: 8.22e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 8 IFTISLLLGTTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 87 ----TQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTsmAILST 162
Cdd:MTH00199 181 qginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 163 ALGGWMGLNQTQIRKILAFSSISHLG---WMTIIISYNP-KLTLLNFYLYTLMTAAVFLTLNSTNTSK--LSTLMTTWTK 236
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESiQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRK 338
|
250 260 270
....*....|....*....|....*....|.
gi 992329277 237 APSLNAMLLLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-279 |
8.49e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 86.74 E-value: 8.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 13 LLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 92 ---------PTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIM-KLPP------ITLLFMTSPALNP-TLL 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvLTLLFGADPALFLgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 155 TSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLY----TLMTAAVFLT----LNSTNTSK 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 992329277 227 LSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAA 279
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLA 408
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-267 |
6.29e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 84.91 E-value: 6.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 3 PQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAI---------EAATKYFLTQAAASALVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 74 SMTNAWHTGQ----WDITQLTHPTS----------CLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPI 139
Cdd:MTH00198 267 CALYFGFTGNegmlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVY 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 140 TLLfmTSPALNPTLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLY-------TLMT 212
Cdd:MTH00198 347 ILL--TSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYavtylvsALAS 424
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 992329277 213 AAVFLTLNSTNT------------------SKLSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 425 FTVICTLEEFGTrtptsrqrdgsfgnynlvRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-263 |
1.52e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 71.19 E-value: 1.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 7 LIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHP-RAIEAATKYFLTQAAASALVL--FSSM--TNAWHT 81
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLygLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 82 GQWDI------TQLTHPTSCLI----LTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPP-------ITLLFM 144
Cdd:CHL00049 194 ELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAAsalatriFDIPFY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 145 TSPALNPTLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTI-IISYNPK------LTLLNFYLYTLMTAAVFL 217
Cdd:CHL00049 274 FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNdgyasmITYMLFYIFMNLGTFACI 353
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 992329277 218 TLNS--TNTSKLSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 354 VLFGlrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.46e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.07 E-value: 1.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 50 PRAIEAATKYFLTQAAASALVLF-SSMTNAWHTGQwdiTQL--------THPTSCLILT-----TAIAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALAlvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 116 PEVLQGAPLTTGLLLSTIMKLP----PITLLFMTSPALNP---TLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 189 WMTI--IISYNPKLTLLNFYL--YTLMT----AAVFLTLNSTNTSKLSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FVMIglVAGTEAGYASMVFYLlaYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 992329277 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-198 |
2.20e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 64.72 E-value: 2.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 49 HPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQW--DITQLTH-----PTSCLI---LTTAIAMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplplTAQLLLflaFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 119 LQGAPLTTGLLLSTIM-KLP-------PITLLFMTSPALNPTLLTsMAILSTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:COG1008 236 HVEAPTAGSVLLAGVLlKMGgygllrfALPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
....*....
gi 992329277 191 TI-IISYNP 198
Cdd:COG1008 315 LLgIFALNP 323
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.27e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.42 E-value: 1.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFS---------SMTNAWHTGQWDITQLTHPTSCL-ILTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 102 IAMKLGLVPFHFWFPEVLQGAP--LTTGLLLSTIMKLPPITLLFMT--SPALNPT----LLTSMAILSTALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 174 QIRKILAFSSISHLGWMTI-----IISY-NPKLT----------LLNFYLYTLMTAAVFLT----LNSTNTSKLSTLMTT 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALgDPAMAsygeialaggIYHIVNHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 992329277 234 WTKAPSLNAMLLLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
4.42e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.93 E-value: 4.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 96 LILTTAIAmKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLL------FMTSPALNPTLLTsMAILSTALGGWMG 169
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVLV-LGLATMLLGGWRA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 170 LNQTQIRKILAFSSISHLGWMTIIISYNPK------LTLLnfYLYTLMTAAVFLTL----NSTNTSKLSTLMTTWTKAPS 239
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAML--LAHALFKAALFLVVgiidHSTGTRDIRKLSGLGRRQPV 363
|
170 180
....*....|....*....|....
gi 992329277 240 LNAMLLLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
5.41e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 54.18 E-value: 5.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 50 PRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQW----DITQLTHPTSC-----LILTTAIAMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 121 GAPLTTGLLLSTIM-KLPPITLLFMTSPaLNP-------TLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLlKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 193 -IISYNPKLT---LLNFYLYTLMTAAVFLTL----NSTNTSKLSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 gIFSFNELGIsgaVFQMISHGLITAALFLLVgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
....
gi 992329277 265 LIIQ 268
Cdd:TIGR01972 391 LILL 394
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-275 |
6.05e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 54.23 E-value: 6.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 2 NPQAKLIFTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHpRAIEAATKYFLTQAAASALVLFSSMTNAWHT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 82 GQWDIT-------QLTHPTSCLILTTAIA----MKLGLVPFHFWFPE-----------VLQGAPLTTG-----LLLSTIM 134
Cdd:PRK08668 175 GTFDFAdisqgliNDTSTGFALIVFLFLLafgvAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygflLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 135 --KLPPITLLFMTSPALNPTLLTSMAIlSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLT----LLNFYLY 208
Cdd:PRK08668 255 gtKLFSEFGTYRGVPLFNYILAWLGNI-SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNH 333
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 992329277 209 TLMTAAVFLTLNS----TNTSKLSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSM 275
Cdd:PRK08668 334 ALFKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
1.37e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 47.64 E-value: 1.37e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 992329277 291 FFYLRLAYCATITLPPHTTNHMKQWHTNKSTNT-IIAILTTVSITLLPISP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-219 |
1.59e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.83 E-value: 1.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 13 LLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAA------SALVLFSSMTNAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 87 TQLTHPT----------SCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPT---- 152
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 992329277 153 ----LLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYTLMTAAVFLTL 219
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGL 341
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
5.91e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.97 E-value: 5.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 50 PRAIEAATKYFLTQAAASALVLFSSMTNAWH----TGQWDITQLTHPTSCLILTT--------AIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 118 VLQGAPLTTGLLLSTIM-----------KLPpitlLFMTSPALNPTLLTSMAILSTALGGWMGLNQTQIRKILAFSSISH 186
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlkmgaygllrfSLP----LFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
....*...
gi 992329277 187 LGWMTIII 194
Cdd:PRK05846 313 MGFVTLGI 320
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
6.74e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 50.65 E-value: 6.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 33 LEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFS-SMTNAwHTGQWDITQL--------THPTSCLILTTAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLagalaenpTVVTAFGFVLLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 104 MKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPI-----------TLLFMTSPALNpTLLTSMAILSTALGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVyaliriyftvfGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 173 TQIRKILAFSSISHLGWMTIIISYNPKLTLLN--FYL--YTLMTAAVFL-------TLNSTNTSKLSTLMTtwtKAPSLN 241
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLaagaievTYGTRRLSELSGLGR---RMPLTA 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 992329277 242 AMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQSMTPAALILSILSLLGLFFYLRLAY 298
Cdd:PRK08375 370 AAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-268 |
7.48e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 50.72 E-value: 7.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 92 PTSCLILTTAIAMKLGLVPFhFWFPEVLQGAPLTTGLLLSTIMKLPPI-------TLLFMTSPALNPTLLTSMAILSTAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTKVGIyalirvfTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 165 GGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLN--FYLYTLMT--AAVFLTLNS----TNTSKLSTLMTTWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGaiFYLVHDMVvkTALFLIAGSlvrlTGYRSLQYLGGLYRK 365
|
170 180 190
....*....|....*....|....*....|..
gi 992329277 237 APSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-192 |
2.16e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 49.38 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 48 HHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTSCLI---LTTAIAM--------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILsspLLTLILLllllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 117 EVLQGAPLTTGLLLSTIMKLPPITLLFMTSP--ALNPTLLTSMAI--LSTAL-GGWMGLNQTQIRKILAFSSISHLGWMT 191
Cdd:COG1009 236 DAMEGPTPVSALLHAATMVKAGVYLLARLSPlfALSPVWLTVVAIigAITALfAALIALAQTDIKRVLAYSTVSQLGYMF 315
|
.
gi 992329277 192 I 192
Cdd:COG1009 316 L 316
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-192 |
2.63e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.77 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 8 IFTISLLLgttiTISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSS----------MTN 77
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 78 AWHTGQW-DITQLTHPTSCLILTTAIAM-------KLGLVPFHFWFPEVLQGAP-----LTTGLLLST----IMKLPPIT 140
Cdd:PRK06458 192 GEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPspvsaLLSGVLLNValyaVLRYYILI 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 992329277 141 LLFMTSPALNPtLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTI 192
Cdd:PRK06458 272 DAAIGSDFPGR-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
5.60e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.81 E-value: 5.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 33 LEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFS-----SMTNAWHTGqwDITQLTHP--------TSCLILT 99
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMG--DMFLIIQDlptnraiqIGVLFIM 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 100 TAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITL------------LFMTSPALNpTLLTSMAILSTALGGW 167
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLiirivydvfkanFVFTTLPFN-NVFMILAALAIVFGSV 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 168 MGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLY----TLMTAAVFLTLNST----NTSKLSTLMTTWTKAPS 239
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPK 375
|
250 260
....*....|....*....|....*...
gi 992329277 240 LNAMLLLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
7.35e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 7.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 98 LTTAIAM--------KLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPAL--NPT---LLTSMAILSTAL 164
Cdd:PRK12650 206 LTTVVAVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 165 GGWMGLNQTQIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYT----LMTAAVFLTL----NSTNTSKLSTLMTTWTK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 992329277 237 APSLNAMLLLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-196 |
9.18e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.52 E-value: 9.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 48 HHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTSC--------LILTTAIAMKLGLV------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 114 WFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPT-----LLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
....*...
gi 992329277 189 WMTIIISY 196
Cdd:PRK12649 316 YLMTMYGY 323
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-195 |
1.43e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.48 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 55 AATKYFLTQAAASALVLFSSMTNAWHTGQ--WDITQLTH---PTSCLILT-----TAIAMKLGLVPFHFWFPE------- 117
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 118 ----VLQGAPLTTG---LLLSTIMKLPPITLLFmtSPALnptllTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK12561 218 pvsmILAGVLLKMGgyaLIRFNVQMLPDAHVYF--APAL-----AILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
....*
gi 992329277 191 TIIIS 195
Cdd:PRK12561 291 LLGIA 295
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-194 |
1.71e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.37 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 101 AIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTI-MKLPPITLLFMTSPALN------PTLLTSMAILSTALGGWMGLNQT 173
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPILPlgaqnlAPAVIAMGIVGIVYGSFATCRQI 318
|
90 100
....*....|....*....|.
gi 992329277 174 QIRKILAFSSISHLGWMTIII 194
Cdd:MTH00226 319 DVKRLVAYSSVAHMGLVSITL 339
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-203 |
1.74e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.15 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 55 AATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTSCLILTTAI----------AMKLGLVPFHFWFPEVLQGAPL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLlllapilvgfGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 125 TTGLLLSTIM-KLPPITLL------FMTSPALNPTLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYN 197
Cdd:PRK06473 238 PVSVLLAGVLlKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
....*.
gi 992329277 198 PKLTLL 203
Cdd:PRK06473 318 TPLSIL 323
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-266 |
2.07e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.98 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 109 VPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPT-----LLTSMAILSTALGGWMGLNQTQIRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 184 ISHLGWMTIIISYNPKLTLLNFYLY----TLMTAAVFLTL----NSTNTSKLSTLMTTWTKAPSLNAMLLLTLLSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAgiidHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170
....*....|.
gi 992329277 256 PLTGFLPKWLI 266
Cdd:PRK12647 372 PLFGFLAKELI 382
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-271 |
2.80e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.64 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 105 KLGLvpfHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPTLLTSMAI-----LSTALGGWMGLNQTQIRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgaLTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 180 AFSSISHLGWMTIIISY--NPKLTLLNFYLYTLMTAAVFLT----LNSTNTS-----KLSTLMTTwtkAPSLNAMLLLTL 248
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSagsvIHSTTVDeqdmrKMGGLIHS---IPFTYTMMLIGS 394
|
170 180
....*....|....*....|...
gi 992329277 249 LSLAGLPPLTGFLPKWLIIqELT 271
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLIL-ELT 416
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
3.17e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.33 E-value: 3.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 34 EINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQ-----LTHPTSCLILTtAIAMKL-- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYG-GLLLLIfg 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 107 -----GLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITL------LFMTSPALNP--TLLTSMAILSTALGGWMGLNQT 173
Cdd:PRK06277 209 llygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSaqGVLIALSVLAMVFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 174 QIRKILAFSSISHLGWMTIIISYNPKLTL-------LNFYLYTlmtAAVFL----TLNSTNTSKLSTLMTTWTKAPSLNA 242
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYK---SALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAF 365
|
250 260
....*....|....*....|....*.
gi 992329277 243 MLLLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-188 |
3.66e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 42.41 E-value: 3.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 55 AATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPT-----SCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 992329277 130 LSTIM-KLPPITLLFMTSPALNPTLLTSMAIL-----STALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPELWWGVLILlagsiSALLGVIYALKEHDLKGLLAYSSIENIG 307
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.52e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.08 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 55 AATKYFLTQAAASALVLFSSMTNAWHTGQWD------ITQLTHPTSCLILTTAI----AMKLGLVPFHFWFPEV-LQGAP 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 124 LTTGLLLSTIMKLPPITL------LFMTSPALNPTLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 198 PKLTLLN---------------FYLYTLMTAAVfltlNSTNTSKLSTLMTTWTKAPSLNAMLLLTLLSLAGLPPLTGFLP 262
Cdd:PRK07363 318 TQLSLLGavaqmishglilallFHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVA 393
|
....*.
gi 992329277 263 KWLIIQ 268
Cdd:PRK07363 394 EFIVFQ 399
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
101-192 |
1.78e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 40.05 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 101 AIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTI-MKLPPITLLFMTSPAL-------NPTLLTsMAILSTALGGWMGLNQ 172
Cdd:MTH00204 218 SLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGIlLKLGGYGFLRFSWPLFpaaseyfAPLIVM-LSVIAVIYGSLTTCRQ 296
|
90 100
....*....|....*....|
gi 992329277 173 TQIRKILAFSSISHLGWMTI 192
Cdd:MTH00204 297 VDFKRLIAYSSVAHMGLVPL 316
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
1.80e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 39.93 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 103 AMKLGLVPFHFWFPEVLQGAP---------LTTGLLLSTIMKLppITLLFMTSPALNPTLLTSMAILSTALGGWMGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPiaiaalfgaLLTKVGVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 174 QIRKILAFSSISHLGWMTIIISYNPKLTLLNFYLYT----LMTAAVFL----TLNSTNTS---KLSTLMTTWtkaPSLNA 242
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLligiMIKITGTTdlkKMGGLIKRY---PVLGW 374
|
170 180
....*....|....*....|....*.
gi 992329277 243 MLLLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
75-197 |
2.41e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 39.51 E-value: 2.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 75 MTNAW---HTGQWDITQ---LTHPTSCLIL--TTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTS 146
Cdd:MTH00066 182 LSMAWlamNTNSWELQQiflLNDNSTLPLLglILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFH 261
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 992329277 147 PAL--NPTLLT---SMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYN 197
Cdd:MTH00066 262 PLLenNQTALTiclCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLN 317
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
2.71e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.74 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 110 PFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPT-----LLTSMAILSTALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 185 SHLGW-MTII-----ISYNPKLTLLNFY-------LYTLMTAAVF---------LTLNSTNTSKLSTLMTTWTKAPSLNA 242
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 992329277 243 MLLLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
13-190 |
3.44e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.30 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 13 LLLGTTITISSNHW---ITAWA--GLEINTLailpLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDIT 87
Cdd:PRK08168 109 VLAAVHLLVLSDHLlvlIAAWAaiSLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 88 QL-----THPTS------CLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMT-----SPALNp 151
Cdd:PRK08168 185 ALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLIRFAplleqAPPAR- 263
|
170 180 190
....*....|....*....|....*....|....*....
gi 992329277 152 TLLTSMAILSTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK08168 264 WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
68-203 |
3.74e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.16 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 68 ALVLFSSMTNAWHTGQWDITQLTHPTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSP 147
Cdd:MTH00211 180 SMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 992329277 148 ALNPTLLTSMAIL-----STALGGWMGLNQTQIRKILAFSSISHLGWMTIIISYN-PKLTLL 203
Cdd:MTH00211 260 LFQNNQLILGAVLllgalTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFL 321
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-190 |
4.30e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.85 E-value: 4.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 52 AIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTSCLILTTAIAMKLGLV----------------PFHFWF 115
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 116 PEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALN--PTLLTSMAILSTA---LGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK07376 251 PDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEqfPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYM 330
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-276 |
4.48e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 4.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 15 LGTTITISSNHWITAWAGLEINTLA---ILPLISKSHHPRAIEAATKYFLTqaaasALVLFSSMTNAWHTGQWDITQLTH 91
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFVFMAFGELST-----VLILAGFAWAFIISGTTNFSYLPS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 92 PTSCLILTTAIAMKLGLVPFHF--WFPEVLQGAPLTTGLLLSTIMKLP------PITLLFMTSPALNPTL-LTSMAILST 162
Cdd:PRK06459 158 PVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMgvygilKMTILTQTIPIGYFGLtILAIGAFSI 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 163 ALGGWMGLNQTQIRKILAFSSISHLGWM-----TIIISYNPKLTLLNFYLYTLMTAA---------VFLTLNSTNTSKLS 228
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSIT 317
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 992329277 229 TLMTTWTKAPSLNAMLLLTLLSLAglPPLTGFLPKWLIIQELTKQSMT 276
Cdd:PRK06459 318 YSKKIRNRWIELGLTLLASSLSGL--LPNIGGVASWLLLESLFMFAYV 363
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-271 |
7.29e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 38.01 E-value: 7.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 9 FTISLLLGTTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQ 88
Cdd:PRK07234 99 QLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSG 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 89 LTH--PTSCLILTTAIAMKLGLVPFHFWFPEVLQGAPLTTGLLLSTIMKLPPITLLFMTSPALNPT--LLTSMAILSTAL 164
Cdd:PRK07234 179 LATadPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992329277 165 GGWMGLNQTQIRKILAFSSISHLGWmtIIISynPKLTLLNFYLYTLMTAAVFL---TLNSTNTSKLSTLMTTWTKAPSLn 241
Cdd:PRK07234 259 GVLFALLEKDLKRMLAFSTISQLGF--ILAA--PLVGGLYALAHGLVKSTLFLcagALPSRNFTELISQMLGIGKWIPL- 333
|
250 260 270
....*....|....*....|....*....|
gi 992329277 242 amlLLTLLSLAGLPPLTGFLPKWLIIQELT 271
Cdd:PRK07234 334 ---TMASFSIAGFPLLAGFVSKVLTLKNLL 360
|
|
| |
