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Conserved domains on  [gi|992320536|gb|AMH85350|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Drosophila unipunctata]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 1.08e-37

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.96  E-value: 1.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  15 SFIVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSV 94
Cdd:MTH00161  13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                         90       100
                 ....*....|....*....|.
gi 992320536  95 IFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161  93 FFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 1.08e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.96  E-value: 1.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  15 SFIVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSV 94
Cdd:MTH00161  13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                         90       100
                 ....*....|....*....|.
gi 992320536  95 IFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161  93 FFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-82 3.09e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 73.23  E-value: 3.09e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 992320536   19 MILASILSKKTIvDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFK 82
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR 63
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 16-115 8.68e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 64.76  E-value: 8.68e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  16 FIVMILASILSKKTiVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVI 95
Cdd:COG0838   20 LAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGLIEMLVF 98

                         90       100
                 ....*....|....*....|
gi 992320536  96 FILILLIGLYhEWNQGMLNW 115
Cdd:COG0838   99 IAILLVGLIY-AWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 1.08e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.96  E-value: 1.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  15 SFIVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSV 94
Cdd:MTH00161  13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                         90       100
                 ....*....|....*....|.
gi 992320536  95 IFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161  93 FFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.07e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 106.87  E-value: 3.07e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536   1 MFSIILIALIIMMISFIVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILI 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 992320536  81 FKFSNLLVWTSTSVIFILILLIGLYHEWNQGMLNWS 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 1.57e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 100.07  E-value: 1.57e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536   1 MFSIILIALIIMMISFIVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILI 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 992320536  81 FKFSNLLVWTSTSVIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 17-116 5.40e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 91.07  E-value: 5.40e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  17 IVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIF 96
Cdd:MTH00012  17 LVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILF 96

                         90       100
                 ....*....|....*....|
gi 992320536  97 ILILLIGLYHEWNQGMLNWS 116
Cdd:MTH00012  97 LLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-116 4.98e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 83.45  E-value: 4.98e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  34 EKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIFILILLIGLYHEWNQGML 113
Cdd:MTH00106  32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                 ...
gi 992320536 114 NWS 116
Cdd:MTH00106 112 EWT 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-77 2.46e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 81.50  E-value: 2.46e-21
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 992320536  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPM 77
Cdd:MTH00136  31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPL 76
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 17-115 1.19e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 80.04  E-value: 1.19e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  17 IVMILASILSKKTIV----------DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPM---ILIFKF 83
Cdd:MTH00069   4 LMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNTP 83

                         90       100       110
                 ....*....|....*....|....*....|..
gi 992320536  84 SNLLVWTSTSVIFILILLIglyHEWNQGMLNW 115
Cdd:MTH00069  84 TNTLFWSTLILILLTLGLI---YEWIQGGLEW 112
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 15-115 4.65e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 78.40  E-value: 4.65e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  15 SFIVMILASILSK--KTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIlifkFSNLLVWTST 92
Cdd:MTH00203  12 LLLSLILLFIAFWlpKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLP----WSNQLSSLSL 87

                         90       100
                 ....*....|....*....|....*
gi 992320536  93 --SVIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00203  88 llAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 17-115 5.29e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 78.38  E-value: 5.29e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  17 IVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIF 96
Cdd:MTH00113  15 TILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATII 94

                         90
                 ....*....|....*....
gi 992320536  97 ILILLIGLYHEWNQGMLNW 115
Cdd:MTH00113  95 LTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 6.46e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 78.10  E-value: 6.46e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536   1 MFSIILIALIIMMISFIVMILASILSKKTIvDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILI 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 992320536  81 FKFSNLLVWTSTSVIFILILLIGLYHEWNQGMLNWSN 117
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-82 3.09e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 73.23  E-value: 3.09e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 992320536   19 MILASILSKKTIvDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFK 82
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR 63
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 16-115 8.68e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 64.76  E-value: 8.68e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  16 FIVMILASILSKKTiVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVI 95
Cdd:COG0838   20 LAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGLIEMLVF 98

                         90       100
                 ....*....|....*....|
gi 992320536  96 FILILLIGLYhEWNQGMLNW 115
Cdd:COG0838   99 IAILLVGLIY-AWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 17-116 3.01e-14

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 63.73  E-value: 3.01e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  17 IVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIF 96
Cdd:PRK06602  23 ILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFVEAMIFI 102

                         90       100
                 ....*....|....*....|
gi 992320536  97 ILILLIGLYhEWNQGMLNWS 116
Cdd:PRK06602 103 LVLLVGLVY-LWRKGALDWE 121
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 2.61e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 61.26  E-value: 2.61e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIFILILLIGLYhEWNQG 111
Cdd:MTH00055  35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLIILTIGLIY-EWVKG 113


                 ....
gi 992320536 112 MLNW 115
Cdd:MTH00055 114 GLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 17-115 2.54e-12

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 58.53  E-value: 2.54e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  17 IVMILASILSKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIF 96
Cdd:MTH00018  15 ALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWTMVGFL 94

                         90
                 ....*....|....*....
gi 992320536  97 ILILLIGLYhEWNQGMLNW 115
Cdd:MTH00018  95 FILTLGLIY-EWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 7.53e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 54.94  E-value: 7.53e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIFILILLIGLYhEWNQG 111
Cdd:MTH00030  40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYTFLIVLAIGLAY-EWIKG 118


                 ....
gi 992320536 112 MLNW 115
Cdd:MTH00030 119 GLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
16-82 2.63e-04

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 37.72  E-value: 2.63e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 992320536  16 FIVMILASILSKKTI---VDREKSSPFECGFDP-KSSSRLpfSLRFFLITIIFLIFDVEIALILPMILIFK 82
Cdd:PRK08489  25 FLTTRLARFISRKLAqknTEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFK 93
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 3.27e-04

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 37.41  E-value: 3.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  32 DREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIFILILLIGLYhEWNQG 111
Cdd:PRK07756  39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEMLIFVVMLLVGLAY-AWKKK 117


                 ....
gi 992320536 112 MLNW 115
Cdd:PRK07756 118 VLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 3.40e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 37.34  E-value: 3.40e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  19 MILASILSKKTIvDREKSSPFECGFDPKSSSRLP--FSLRFFLITIIFLIFDVEIALILPMILifKFSNLLVWTSTSVIF 96
Cdd:PRK07928  22 VVVASLVGPKRY-NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAV--SFDALGVFGLVEMAL 98

                         90       100
                 ....*....|....*....|
gi 992320536  97 ILILLIGLY-HEWNQGMLNW 115
Cdd:PRK07928  99 FMLTVFVAYaYVWRRGGLEW 118
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 26-77 1.04e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.03  E-value: 1.04e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 992320536  26 SKKTIVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPM 77
Cdd:MTH00060  28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNM 79
ndhC CHL00022
NADH dehydrogenase subunit 3
 34-116 1.20e-03

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 35.73  E-value: 1.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 992320536  34 EKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMILIFKFSNLLVWTSTSVIFILIlLIGLYHEWNQGML 113
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAFIEALIFVLIL-IVGLVYAWRKGAL 117


                 ...
gi 992320536 114 NWS 116
Cdd:CHL00022 118 EWS 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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