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Conserved domains on  [gi|984709214|gb|AMB82781|]
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sugar ABC transporter permease [Streptococcus salivarius]

Protein Classification

carbohydrate ABC transporter permease( domain architecture ID 10003067)

carbohydrate ABC transporter permease is the transmembrane (TM) subunit of a periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter responsible for the translocation across the membrane of one or more from a variety of carbohydrate substrates including trehalose, lactose, arabinose, and maltodextrin

Gene Ontology:  GO:0042626|GO:0140359|GO:0008643|GO:0055085
PubMed:  25750732|24638992|30626703
TCDB:  3.A.1.1.-

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
156-438 1.22e-57

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


:

Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 191.89  E-value: 1.22e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVPLIGVLLFTILPLIYMICLAFTNFDHNHPAPKslfdWVGFSSFGEVLQGRmagTFFPLLTWTLIWAVAATATTFFF 235
Cdd:COG1175   23 FLLPALLLLLVFVLYPLLYTLYLSFTDWNLLGPPPE----FVGLDNYARLFTDP---RFWNALGNTLLFTVVSVPLQLVL 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 236 GIVLALLLNtKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLN-DHGPLNGLLQTLHITngPIPFLTDPLWAKFSIIFVN 314
Cdd:COG1175   96 GLLLALLLN-RKLRGRGFFRTLFFLPWVISPVVVALIWKWLFNpDYGLLNALLGALGLE--PINWLGDPSLALPAVIIVT 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 315 MWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGGPknse 394
Cdd:COG1175  173 VWKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLTGGGP---- 248

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 984709214 395 yyqAGSTDLLVTWLYKLTVSAKDYNLASVIGILIFAISATFSLL 438
Cdd:COG1175  249 ---GNSTTTLVLYIYQTAFQQFDFGYASAIAVVLFLIILVLTLL 289
 
Name Accession Description Interval E-value
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
156-438 1.22e-57

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 191.89  E-value: 1.22e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVPLIGVLLFTILPLIYMICLAFTNFDHNHPAPKslfdWVGFSSFGEVLQGRmagTFFPLLTWTLIWAVAATATTFFF 235
Cdd:COG1175   23 FLLPALLLLLVFVLYPLLYTLYLSFTDWNLLGPPPE----FVGLDNYARLFTDP---RFWNALGNTLLFTVVSVPLQLVL 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 236 GIVLALLLNtKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLN-DHGPLNGLLQTLHITngPIPFLTDPLWAKFSIIFVN 314
Cdd:COG1175   96 GLLLALLLN-RKLRGRGFFRTLFFLPWVISPVVVALIWKWLFNpDYGLLNALLGALGLE--PINWLGDPSLALPAVIIVT 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 315 MWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGGPknse 394
Cdd:COG1175  173 VWKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLTGGGP---- 248

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 984709214 395 yyqAGSTDLLVTWLYKLTVSAKDYNLASVIGILIFAISATFSLL 438
Cdd:COG1175  249 ---GNSTTTLVLYIYQTAFQQFDFGYASAIAVVLFLIILVLTLL 289
malF PRK10999
maltose ABC transporter permease MalF;
196-438 7.45e-39

maltose ABC transporter permease MalF;


Pssm-ID: 236816 [Multi-domain]  Cd Length: 520  Bit Score: 147.03  E-value: 7.45e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 196 WVGFSSFGEVLQG-RMAGTFFPLLTWTLIWAVAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMR 274
Cdd:PRK10999 264 TIGWKNFTRVFTDeGIQKPFIAIFIWTVVFSLLTVVLTVAVGMVLACLVQWEALKGKAVYRVLLILPYAVPSFISILIFK 343

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 275 NFLNDH-GPLNGLLQTLHitnGPIP-FLTDPLWAKFSIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIF 352
Cdd:PRK10999 344 GLFNQSfGEINMMLSALF---GIKPaWFSDPTLAKTMILIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNF 420

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 353 KSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGGPK---NSEyyQAGSTDLLVTWLYKLTV---SAKDYNLASVIGI 426
Cdd:PRK10999 421 FKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDmigTTT--PAGYTDLLVSYTYRIAFeggGGQDFGLAAAIAT 498

                        250
                 ....*....|..
gi 984709214 427 LIFAISATFSLL 438
Cdd:PRK10999 499 LIFLLVGALAIL 510
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 218-391 4.81e-16

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 76.16  E-value: 4.81e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 218 LTWTLIWAVAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMrnflndhgplngllqtLHITNGPI 297
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLL----------------VLLFGVLL 64

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 298 PFLTDPLWAKFSIIFVNMWIgIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNIN 377
Cdd:cd06261   65 GWGILPGLGLPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALG 143

                        170
                 ....*....|....
gi 984709214 378 NFNVIYFLTGGGPK 391
Cdd:cd06261  144 EFALVSFLGGGEAP 157
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 233-440 2.35e-11

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 62.32  E-value: 2.35e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  233 FFFGIVLALLLNTKglkFKKVWRTLFVITIAVPQFVSLLLMRNflndhgplngllqtlhitngpIPFLTDPLWAKFSIIF 312
Cdd:pfam00528   2 IPLGIIAALRRGRR---LDRLLRPLIDLLQALPSFVLAILLVV---------------------IAILSILGHGILPAII 57

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  313 VNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGGPkn 392
Cdd:pfam00528  58 LALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPG-- 135

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 984709214  393 seyyqAGSTDLLVTWLYkltvsakDYNLASVIGILIFAISATFSLLAY 440
Cdd:pfam00528 136 -----LGLLLIEAILGY-------DYPEIQGPVLAAALILLLLNLLVD 171
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 151-440 1.97e-04

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 43.90  E-value: 1.97e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  151 RFHMGLMTVPLIGVLLFTILPLIYMICLAFTNFDHnhpapkslfDWVGFSSFGEVLQgrmAGTFFPLLTWTLIWAVAATA 230
Cdd:TIGR03262   1 LIARLLLAGMILALLLFLLLPLLALLTKSVYDSDG---------DFIGLANFAEYFA---TPGLLQSLGNSLTVSAIVTA 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  231 TTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLlqtlhitngpipFLTDPLWAKFSI 310
Cdd:TIGR03262  69 IVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGL------------LGGFSIYGFWGI 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  311 IFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFnviyfltgGGP 390
Cdd:TIGR03262 137 VIGEVFYTFPHALMILVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDF--------GVP 208

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 984709214  391 KnseyYQAGSTDLLVTWLYKLTVSAKDYNLASVIGILIFaISATFSLLAY 440
Cdd:TIGR03262 209 K----VIGGDYNVLATDIYKQVIGQQNFPMGAVVGVLLL-LPALLAFGID 253
 
Name Accession Description Interval E-value
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
156-438 1.22e-57

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 191.89  E-value: 1.22e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVPLIGVLLFTILPLIYMICLAFTNFDHNHPAPKslfdWVGFSSFGEVLQGRmagTFFPLLTWTLIWAVAATATTFFF 235
Cdd:COG1175   23 FLLPALLLLLVFVLYPLLYTLYLSFTDWNLLGPPPE----FVGLDNYARLFTDP---RFWNALGNTLLFTVVSVPLQLVL 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 236 GIVLALLLNtKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLN-DHGPLNGLLQTLHITngPIPFLTDPLWAKFSIIFVN 314
Cdd:COG1175   96 GLLLALLLN-RKLRGRGFFRTLFFLPWVISPVVVALIWKWLFNpDYGLLNALLGALGLE--PINWLGDPSLALPAVIIVT 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 315 MWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGGPknse 394
Cdd:COG1175  173 VWKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLTGGGP---- 248

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 984709214 395 yyqAGSTDLLVTWLYKLTVSAKDYNLASVIGILIFAISATFSLL 438
Cdd:COG1175  249 ---GNSTTTLVLYIYQTAFQQFDFGYASAIAVVLFLIILVLTLL 289
malF PRK10999
maltose ABC transporter permease MalF;
196-438 7.45e-39

maltose ABC transporter permease MalF;


Pssm-ID: 236816 [Multi-domain]  Cd Length: 520  Bit Score: 147.03  E-value: 7.45e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 196 WVGFSSFGEVLQG-RMAGTFFPLLTWTLIWAVAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMR 274
Cdd:PRK10999 264 TIGWKNFTRVFTDeGIQKPFIAIFIWTVVFSLLTVVLTVAVGMVLACLVQWEALKGKAVYRVLLILPYAVPSFISILIFK 343

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 275 NFLNDH-GPLNGLLQTLHitnGPIP-FLTDPLWAKFSIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIF 352
Cdd:PRK10999 344 GLFNQSfGEINMMLSALF---GIKPaWFSDPTLAKTMILIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNF 420

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 353 KSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGGPK---NSEyyQAGSTDLLVTWLYKLTV---SAKDYNLASVIGI 426
Cdd:PRK10999 421 FKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDmigTTT--PAGYTDLLVSYTYRIAFeggGGQDFGLAAAIAT 498

                        250
                 ....*....|..
gi 984709214 427 LIFAISATFSLL 438
Cdd:PRK10999 499 LIFLLVGALAIL 510
LplB COG4209
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ...
 156-427 1.03e-28

ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 443357 [Multi-domain]  Cd Length: 316  Bit Score: 114.80  E-value: 1.03e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVP-LIGVLLFTILPLIYMIcLAFTNFDhnhpAPKSLFD--WVGFSSFGEVLQGRMagtFFPLLTWTLIWAVAATATT 232
Cdd:COG4209   31 LMLLPgLIYLLIFSYLPMYGIV-IAFKDYN----PFKGIFGspWVGLKNFKFLFSSPD---FWRVLRNTLLISLLKLVFG 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 233 FFFGIVLALLLNT-KGLKFKKvwrtlFVITIA-VPQFVSLL----LMRNFLN-DHGPLNGLLQTLHITngPIPFLTDPLW 305
Cdd:COG4209  103 FPLPIILALLLNElRSKRFKK-----TVQTISyLPHFLSWVvvagIVYQFLSpDTGLVNQLLRALGGE--PINFLTEPKY 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 306 AKFSIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQI------LLIMApsliqqfIGNI--N 377
Cdd:COG4209  176 FRPIYVFSGIWKEAGWGSIIYLAAITGIDPELYEAAAIDGAGRWQQIWHITLPGIrptiviLLILN-------IGNIlnV 248

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 984709214 378 NFNVIYFLtgggpKNSEYYQAgsTDLLVTWLYKLTVSAKDYNLASVIGIL 427
Cdd:COG4209  249 GFEQIYLL-----YNPLNYST--SDVIDTYVYRIGLQNGDYSYATAVGLF 291
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 156-452 8.85e-24

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 100.61  E-value: 8.85e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVPLIGVLLFTILPLIYMICLAFTNFDhnhpAPKSLFDWVGFSSFGEVLQgrmAGTFFPLLTWTLIWAVAATATTFFF 235
Cdd:COG1176   14 LLLPALLWLLLFFVLPLLLLLVYSFTTRD----PYGGVVPGFTLENYARLFT---DPLYLKVLLRTLWIALLTTLICLLL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 236 GIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLLQTLHITNGPIPFLTDPlwakFSIIFVNM 315
Cdd:COG1176   87 GYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLALGLIDEPLRLLYTE----FAVVIGLV 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 316 WIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILL-IMAPSLIqQFIGNINNFnVIYFLTGGgpknse 394
Cdd:COG1176  163 YVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPgIIAGSLL-VFIPALGAF-VTPALLGG------ 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 984709214 395 yyqaGSTDLLVTWLYKLTVSAKDYNLASVIGILIFAISATFsLLAYTRSSSFKEGAAK 452
Cdd:COG1176  235 ----GKVLMIGNLIYQQFLSALNWPLAAALAVVLLLIVLLV-LLLYLRLLRRRRLLGG 287
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
146-438 3.26e-20

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 92.92  E-value: 3.26e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 146 TLADGRFHMGLMTVPLIGVLLFTILPLIYMICLAFTnfdhnhpapkslfdwVGFSSFGEVLQgrmAGTFFPLLTWTLIWA 225
Cdd:COG1178    2 STRPRRRPRLLLLLLALLLALLVLLPLLALLLRAFT---------------DGLANFWALLS---DPYLWRALGNTLLLA 63

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 226 VAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLLQTLHitnGPIPFLTDPLW 305
Cdd:COG1178   64 LLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALF---GLEPPDIYGLG 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 306 AkfsIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFL 385
Cdd:COG1178  141 G---IILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVL 217

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 984709214 386 tgggpknseyyqAGSTDLLVTWLYKLTVSAKDYNLASVIGILIFAISATFSLL 438
Cdd:COG1178  218 ------------GGGYTTLTTAIYQAWLGDFDLGAAAALALVLLLLVLLLLLL 258
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 156-379 1.05e-17

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 82.84  E-value: 1.05e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVPLIGVLLFTILPLIYMICLAF-TNFDHNHPAPKSLFDWVGFSSFGEVLQgrmAGTFFPLLTWTLIWAVAATATTFF 234
Cdd:COG0395   16 LLYLLLILLALLFLFPLYWMVVTSFkPPAEIFSGPPSLLPSEFTLENYRAAFT---DGPFGRYLLNSLIVAVVSTVLSLL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 235 FGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLlmrnflndhgPLNGLLQTLHitngpipfLTDPLWAkfsIIFVN 314
Cdd:COG0395   93 LSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLI----------PLYLLFRQLG--------LLNTYWG---LILPY 151

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 984709214 315 MWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNF 379
Cdd:COG0395  152 LAFGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDF 216
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 218-391 4.81e-16

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 76.16  E-value: 4.81e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 218 LTWTLIWAVAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMrnflndhgplngllqtLHITNGPI 297
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLL----------------VLLFGVLL 64

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 298 PFLTDPLWAKFSIIFVNMWIgIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNIN 377
Cdd:cd06261   65 GWGILPGLGLPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALG 143

                        170
                 ....*....|....
gi 984709214 378 NFNVIYFLTGGGPK 391
Cdd:cd06261  144 EFALVSFLGGGEAP 157
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 156-440 8.56e-15

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 73.99  E-value: 8.56e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVPLIGVLLFTILPLIYMICLAFTnfdhnhpAPKSL-FDWVGFS--SFGEVLQGRmagTFFPLLTWTLIWAVAATATT 232
Cdd:COG1177    8 LLRLFLALVLLFLYLPILVLVLYSFN-------DSWFLtFPPEGFTlrWYAELFSDP---RLLDALLNSLLIALLSTLLA 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 233 FFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFV---SLLLmrnflndhgplngLLQTLHITNGPipfltdplwakFS 309
Cdd:COG1177   78 TVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVlgvALLL-------------LFSALGLSGGL-----------WG 133

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 310 IIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGG 389
Cdd:COG1177  134 LILAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPG 213

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 984709214 390 PKNseyyqagstdlLVTWLYKLTVSAKDYnLASVIGILIFAISATFSLLAY 440
Cdd:COG1177  214 VTT-----------LPVYIYSMIRRGISP-EINALSTLLILLSLLLLLLAE 252
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 233-440 2.35e-11

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 62.32  E-value: 2.35e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  233 FFFGIVLALLLNTKglkFKKVWRTLFVITIAVPQFVSLLLMRNflndhgplngllqtlhitngpIPFLTDPLWAKFSIIF 312
Cdd:pfam00528   2 IPLGIIAALRRGRR---LDRLLRPLIDLLQALPSFVLAILLVV---------------------IAILSILGHGILPAII 57

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  313 VNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFLTGGGPkn 392
Cdd:pfam00528  58 LALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPG-- 135

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 984709214  393 seyyqAGSTDLLVTWLYkltvsakDYNLASVIGILIFAISATFSLLAY 440
Cdd:pfam00528 136 -----LGLLLIEAILGY-------DYPEIQGPVLAAALILLLLNLLVD 171
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
107-439 1.02e-10

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 63.64  E-value: 1.02e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 107 LIFCAVFAYIYWCNLKSARHLMALKQSGRKVPnfiedfktLADGRFHMGLMTVPLIGVLLFTILPLIYMICLAFTNFDHN 186
Cdd:COG1178  249 LLLVLLLLLLERRLRRRRRYATVGGRARRPRR--------VKLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTKALDD 320

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 187 HPapkslfdwvGFSSFGEVLqgrMAGTFFPLLTWTLIWAVAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQ 266
Cdd:COG1178  321 NL---------TLDNYRFVL---LDPSLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPG 388

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 267 FV---SLLLmrnFLNDHGPLNgllqtlhitngpipfLTDPLWAkfsIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEI 343
Cdd:COG1178  389 IVlglGLLL---LFNRPLPLL---------------LYGTLAI---LVLAYVVRFLPFALRSLEAALAQIDPSLEEAARS 447

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 344 DGASKFQIFKSITFPqillIMAPSLIQQ----FIGNINNFNVIYFLTGGGpknseyyqagsTDLLVTWLYKLTvSAKDYN 419
Cdd:COG1178  448 LGASPLRTLRRVTLP----LLRPGLLAAallvFVTSMKELSATLLLRPPG-----------FETLAVLIYQLA-SSGRYG 511

                        330       340
                 ....*....|....*....|
gi 984709214 420 LASVIGILIFAISATFSLLA 439
Cdd:COG1178  512 EAAALALLLVLVSLLPVLLL 531
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 156-361 6.35e-10

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 59.76  E-value: 6.35e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 156 LMTVPLIGVLLFTILPLIYMICLAFTnfdhnhpapkslfdwVGFSSFGEVLQGRmagTFFPLLTWTLIWAVAATATTFFF 235
Cdd:COG0555   12 TLGLTLLYLSLIVLLPLAALVLKAAG---------------LGWAEFWAVLTSP---RVLAALKLSLGTALIAALINLVF 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 236 GIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLLQTLHITngpIPFltdplwAKFSIIFVNM 315
Cdd:COG0555   74 GLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIK---VAF------TPLGIVLAQT 144

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 984709214 316 WIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQIL 361
Cdd:COG0555  145 FVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLL 190
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 161-379 1.55e-07

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 52.46  E-value: 1.55e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 161 LIGVLLFTILPLIYMICLAFTNFdhNHPAPKSLF-DWVGFSSFGEVLQGrmagtfFPLLTW---TLIWAVAATATTFFFG 236
Cdd:COG3833   22 LIILAIIALFPILWVVSASFNPG--GSLYSSSLIpENFTLENYKKLFTE------TPFLRWflnSLIVAVVTAIISVFLA 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 237 IVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLlmrnflndhgPLNGLLQTLHITNGPIpfltdplwakfSIIFVNMW 316
Cdd:COG3833   94 ALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALV----------ALYLLLSALGLLNTLL-----------GLILVYLG 152

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 984709214 317 IGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNF 379
Cdd:COG3833  153 GAIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDF 215
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 160-385 2.15e-05

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 46.15  E-value: 2.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 160 PLIGVLLFTILPLIYMICLAFTNfDHNhpapkslfdwVGFSSFGEVLQgrmAGTFFPLLTWTLIWAVAATATTFFFGIVL 239
Cdd:PRK15050  31 PLLVLAPLVVYPLVRVVLQSLTG-EHG----------LGLATYRAVLG---SPDFRGALLTTLQIAFASTAGCLVLGVLL 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 240 ALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLLQTL-HITNGPIPFLTDPlwakFSIIFVNMWIG 318
Cdd:PRK15050  97 ALVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALQRLfGLEAPPLDFLYSP----GGVILAEITFY 172

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 984709214 319 IPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFNVIYFL 385
Cdd:PRK15050 173 TPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFT 239
cysT CHL00187
sulfate transport protein; Provisional
 221-369 4.77e-05

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 44.62  E-value: 4.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 221 TLIWAVAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLLQTLHITngpIPFl 300
Cdd:CHL00187  60 TLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLGIQ---IVF- 135

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 984709214 301 tdplwAKFSIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPqillIMAPSLI 369
Cdd:CHL00187 136 -----TKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFP----PLIPALL 195
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 151-440 1.97e-04

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 43.90  E-value: 1.97e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  151 RFHMGLMTVPLIGVLLFTILPLIYMICLAFTNFDHnhpapkslfDWVGFSSFGEVLQgrmAGTFFPLLTWTLIWAVAATA 230
Cdd:TIGR03262   1 LIARLLLAGMILALLLFLLLPLLALLTKSVYDSDG---------DFIGLANFAEYFA---TPGLLQSLGNSLTVSAIVTA 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  231 TTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLlqtlhitngpipFLTDPLWAKFSI 310
Cdd:TIGR03262  69 IVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGL------------LGGFSIYGFWGI 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214  311 IFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNINNFnviyfltgGGP 390
Cdd:TIGR03262 137 VIGEVFYTFPHALMILVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDF--------GVP 208

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 984709214  391 KnseyYQAGSTDLLVTWLYKLTVSAKDYNLASVIGILIFaISATFSLLAY 440
Cdd:TIGR03262 209 K----VIGGDYNVLATDIYKQVIGQQNFPMGAVVGVLLL-LPALLAFGID 253
HisM COG0765
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ...
 194-376 2.01e-03

ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440528 [Multi-domain]  Cd Length: 218  Bit Score: 39.67  E-value: 2.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 194 FDW-VGFSSFGEVLQGrmagtffplLTWTLIWAVAATATTFFFGIVLALLLNTKglkfKKVWRTLFVItiavpqFVSLll 272
Cdd:COG0765    3 FDFsVLLDYLPLLLEG---------LLVTLLLTVLAIVLGLVLGLLLALARLSP----NPVLRWLATA------YVEF-- 61

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 273 MRNflndhgplngllqtlhitngpIPFLTDPLWAKFSIIFVNMWIGIPFTMLVATGI-------------IMNLPTEQIE 339
Cdd:COG0765   62 FRG---------------------TPLLVQLFFIYFGLPLLGIDLSPFVAAVIALTLnsaaylaeivragIQSVPKGQWE 120

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 984709214 340 AAEIDGASKFQIFKSITFPQILLIMAPSLIQQFIGNI 376
Cdd:COG0765  121 AARALGLSRWQTMRRIILPQALRIILPPLGNEFISLL 157
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
221-360 7.63e-03

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 38.19  E-value: 7.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 221 TLIWAVAATATTFFFGIVLALLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLLQTLHItngpipfl 300
Cdd:PRK11602  69 TVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNL-------- 140

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 984709214 301 tDPLWAKFSIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQI 360
Cdd:PRK11602 141 -QLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNI 199
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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