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Conserved domains on  [gi|981254954|ref|WP_059474236|]
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alpha/beta fold hydrolase [Burkholderia vietnamiensis]

Protein Classification

alpha/beta fold hydrolase( domain architecture ID 11426811)

alpha/beta hydrolase family protein catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

PubMed:  1409539|12369917

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
7-283 8.05e-44

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


:

Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 149.00  E-value: 8.05e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   7 TDGWIVSDGLRLHYVSWGrDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDWdPRREYYAAAYVRDLD 86
Cdd:COG0596    3 TPRFVTVDGVRLHYREAG-PDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDK-PAGGYTLDDLADDLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  87 ALVRALGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVIEDmgpgasvgsqgsarikrellETPDGFATWAdarvfwrrQ 166
Cdd:COG0596   81 ALLDALGLERVVLVGHSMGGMVALELAARHPERVAGLVLVD--------------------EVLAALAEPL--------R 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 167 RPNLPEAALDSRVAHSLREhapgrivwrhdaagiaaarlaatpeqlvDLWPLIRSLRVPTLLLRGGDSDFLSAQVAADMS 246
Cdd:COG0596  133 RPGLAPEALAALLRALART----------------------------DLRERLARITVPTLVIWGEKDPIVPPALARRLA 184
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 981254954 247 AANAVIERVDIAGATHYVHDDRPAAFNGALREWLDRL 283
Cdd:COG0596  185 ELLPNAELVVLPGAGHFPPLEQPEAFAAALRDFLARL 221
 
Name Accession Description Interval E-value
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
7-283 8.05e-44

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 149.00  E-value: 8.05e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   7 TDGWIVSDGLRLHYVSWGrDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDWdPRREYYAAAYVRDLD 86
Cdd:COG0596    3 TPRFVTVDGVRLHYREAG-PDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDK-PAGGYTLDDLADDLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  87 ALVRALGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVIEDmgpgasvgsqgsarikrellETPDGFATWAdarvfwrrQ 166
Cdd:COG0596   81 ALLDALGLERVVLVGHSMGGMVALELAARHPERVAGLVLVD--------------------EVLAALAEPL--------R 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 167 RPNLPEAALDSRVAHSLREhapgrivwrhdaagiaaarlaatpeqlvDLWPLIRSLRVPTLLLRGGDSDFLSAQVAADMS 246
Cdd:COG0596  133 RPGLAPEALAALLRALART----------------------------DLRERLARITVPTLVIWGEKDPIVPPALARRLA 184
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 981254954 247 AANAVIERVDIAGATHYVHDDRPAAFNGALREWLDRL 283
Cdd:COG0596  185 ELLPNAELVVLPGAGHFPPLEQPEAFAAALRDFLARL 221
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
29-269 1.46e-21

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 91.03  E-value: 1.46e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   29 PAVVMLHGLRSYAQTWADVAHAL-TDRYRVVALDQRGRGASD-WDPRREYYAAAYVRDLDALVRALGLRRFVLVGHSMGG 106
Cdd:pfam00561   1 PPVLLLHGLPGSSDLWRKLAPALaRDGFRVIALDLRGFGKSSrPKAQDDYRTDDLAEDLEYILEALGLEKVNLVGHSMGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  107 ANAFVYAGRDPERLAGLViedmgpgaSVGSQGSARIKRELLETPD-GFATWADARVFWRRQRPNLPeaALDSRVAHSLRE 185
Cdd:pfam00561  81 LIALAYAAKYPDRVKALV--------LLGALDPPHELDEADRFILaLFPGFFDGFVADFAPNPLGR--LVAKLLALLLLR 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  186 HAPGRIV-------WRHDAAGIAAARLAATPEQLVDLW----PLIRSLRVPTLLLRGGDSDFLSAQVAADMSAANAVIER 254
Cdd:pfam00561 151 LRLLKALpllnkrfPSGDYALAKSLVTGALLFIETWSTelraKFLGRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARL 230
                         250
                  ....*....|....*
gi 981254954  255 VDIAGATHYVHDDRP 269
Cdd:pfam00561 231 VVIPDAGHFAFLEGP 245
PRK03592 PRK03592
haloalkane dehalogenase; Provisional
15-124 3.17e-15

haloalkane dehalogenase; Provisional


Pssm-ID: 235135  Cd Length: 295  Bit Score: 74.26  E-value: 3.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  15 GLRLHYVSWGrdDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDwDPRREYYAAAYVRDLDALVRALGL 94
Cdd:PRK03592  16 GSRMAYIETG--EGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASD-KPDIDYTFADHARYLDAWFDALGL 92
                         90       100       110
                 ....*....|....*....|....*....|
gi 981254954  95 RRFVLVGHSMGGANAFVYAGRDPERLAGLV 124
Cdd:PRK03592  93 DDVVLVGHDWGSALGFDWAARHPDRVRGIA 122
pro_imino_pep_1 TIGR01249
proline iminopeptidase, Neisseria-type subfamily; This model represents one of two related ...
12-125 2.71e-08

proline iminopeptidase, Neisseria-type subfamily; This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.


Pssm-ID: 130316 [Multi-domain]  Cd Length: 306  Bit Score: 54.07  E-value: 2.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   12 VSDGLRLHYVSWGRDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGasdwdpRREYYAAAY-------VRD 84
Cdd:TIGR01249  11 VSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPGCRRFFDPETYRIVLFDQRGCG------KSTPHACLEenttwdlVAD 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 981254954   85 LDALVRALGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVI 125
Cdd:TIGR01249  85 IEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVL 125
PKS_TE smart00824
Thioesterase; Peptide synthetases are involved in the non-ribosomal synthesis of peptide ...
41-161 9.78e-04

Thioesterase; Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.


Pssm-ID: 214835 [Multi-domain]  Cd Length: 212  Bit Score: 39.52  E-value: 9.78e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954    41 AQTWADVAHALTDRYRVVALDQRGRGASDWDPRREYYAAAYVrdLDALVRALGLRRFVLVGHSMGGANAFVYAGRDPER- 119
Cdd:smart00824  12 PHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQ--AEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARg 89
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 981254954   120 --LAGLVIEDMGPGASVGSQG-SARIKRELLETPDGFATWADARV 161
Cdd:smart00824  90 ipPAAVVLLDTYPPGDPAPEGwLPELLRGVFEREDSFVPMDDARL 134
Esterase_713_like-2 cd12809
Uncharacterized enzymes similar to novel bacterial esterase that cleaves esters on halogenated ...
98-130 6.28e-03

Uncharacterized enzymes similar to novel bacterial esterase that cleaves esters on halogenated cyclic compounds; This family contains uncharacterized proteins similar to a novel bacterial esterase (Alcaligenes esterase 713) with the alpha/beta hydrolase fold but does not contain the GXSXXG pentapeptide around the active site serine residue as commonly seen in other enzymes of this class. Esterase 713 shows negligible sequence homology to other esterase and lipase enzymes. It is active as a dimer and cleaves esters on halogenated cyclic compounds though its natural substrate is unknown.


Pssm-ID: 214008  Cd Length: 280  Bit Score: 37.59  E-value: 6.28e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 981254954  98 VLVGHSMGGANAFVYAGRDPERLAGLV-IEDMGP 130
Cdd:cd12809  174 ILITHSQGGPFGWLAADARPDLVKAIVaIEPSGP 207
 
Name Accession Description Interval E-value
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
7-283 8.05e-44

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 149.00  E-value: 8.05e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   7 TDGWIVSDGLRLHYVSWGrDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDWdPRREYYAAAYVRDLD 86
Cdd:COG0596    3 TPRFVTVDGVRLHYREAG-PDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDK-PAGGYTLDDLADDLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  87 ALVRALGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVIEDmgpgasvgsqgsarikrellETPDGFATWAdarvfwrrQ 166
Cdd:COG0596   81 ALLDALGLERVVLVGHSMGGMVALELAARHPERVAGLVLVD--------------------EVLAALAEPL--------R 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 167 RPNLPEAALDSRVAHSLREhapgrivwrhdaagiaaarlaatpeqlvDLWPLIRSLRVPTLLLRGGDSDFLSAQVAADMS 246
Cdd:COG0596  133 RPGLAPEALAALLRALART----------------------------DLRERLARITVPTLVIWGEKDPIVPPALARRLA 184
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 981254954 247 AANAVIERVDIAGATHYVHDDRPAAFNGALREWLDRL 283
Cdd:COG0596  185 ELLPNAELVVLPGAGHFPPLEQPEAFAAALRDFLARL 221
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
1-169 1.52e-23

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 95.84  E-value: 1.52e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   1 MNRASGTdgWIVSDGLRLHYVSWGRDDAP--AVVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDPRREYY 77
Cdd:COG2267    1 MTRRLVT--LPTRDGLRLRGRRWRPAGSPrgTVVLVHGLGEHSGRYAELAEALAAAgYAVLAFDLRGHGRSDGPRGHVDS 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  78 AAAYVRDLDALVRALGLR---RFVLVGHSMGGANAFVYAGRDPERLAGLV------IEDMGPGASVGSQGSARIKREL-- 146
Cdd:COG2267   79 FDDYVDDLRAALDALRARpglPVVLLGHSMGGLIALLYAARYPDRVAGLVllapayRADPLLGPSARWLRALRLAEALar 158
                        170       180       190
                 ....*....|....*....|....*....|.
gi 981254954 147 LETP--------DGFATWADARVFWRRQRPN 169
Cdd:COG2267  159 IDVPvlvlhggaDRVVPPEAARRLAARLSPD 189
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
29-269 1.46e-21

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 91.03  E-value: 1.46e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   29 PAVVMLHGLRSYAQTWADVAHAL-TDRYRVVALDQRGRGASD-WDPRREYYAAAYVRDLDALVRALGLRRFVLVGHSMGG 106
Cdd:pfam00561   1 PPVLLLHGLPGSSDLWRKLAPALaRDGFRVIALDLRGFGKSSrPKAQDDYRTDDLAEDLEYILEALGLEKVNLVGHSMGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  107 ANAFVYAGRDPERLAGLViedmgpgaSVGSQGSARIKRELLETPD-GFATWADARVFWRRQRPNLPeaALDSRVAHSLRE 185
Cdd:pfam00561  81 LIALAYAAKYPDRVKALV--------LLGALDPPHELDEADRFILaLFPGFFDGFVADFAPNPLGR--LVAKLLALLLLR 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  186 HAPGRIV-------WRHDAAGIAAARLAATPEQLVDLW----PLIRSLRVPTLLLRGGDSDFLSAQVAADMSAANAVIER 254
Cdd:pfam00561 151 LRLLKALpllnkrfPSGDYALAKSLVTGALLFIETWSTelraKFLGRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARL 230
                         250
                  ....*....|....*
gi 981254954  255 VDIAGATHYVHDDRP 269
Cdd:pfam00561 231 VVIPDAGHFAFLEGP 245
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
30-124 5.69e-17

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 78.02  E-value: 5.69e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   30 AVVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDwdPRREYYAA--AYVRDLDALVRAL-----GLRRFVLvG 101
Cdd:pfam12146   6 VVVLVHGLGEHSGRYAHLADALAAQgFAVYAYDHRGHGRSD--GKRGHVPSfdDYVDDLDTFVDKIreehpGLPLFLL-G 82
                          90       100
                  ....*....|....*....|...
gi 981254954  102 HSMGGANAFVYAGRDPERLAGLV 124
Cdd:pfam12146  83 HSMGGLIAALYALRYPDKVDGLI 105
PRK03592 PRK03592
haloalkane dehalogenase; Provisional
15-124 3.17e-15

haloalkane dehalogenase; Provisional


Pssm-ID: 235135  Cd Length: 295  Bit Score: 74.26  E-value: 3.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  15 GLRLHYVSWGrdDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDwDPRREYYAAAYVRDLDALVRALGL 94
Cdd:PRK03592  16 GSRMAYIETG--EGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASD-KPDIDYTFADHARYLDAWFDALGL 92
                         90       100       110
                 ....*....|....*....|....*....|
gi 981254954  95 RRFVLVGHSMGGANAFVYAGRDPERLAGLV 124
Cdd:PRK03592  93 DDVVLVGHDWGSALGFDWAARHPDRVRGIA 122
PRK10673 PRK10673
esterase;
27-281 2.43e-13

esterase;


Pssm-ID: 182637 [Multi-domain]  Cd Length: 255  Bit Score: 68.22  E-value: 2.43e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  27 DAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDWDPRREYYAAAyvRDLDALVRALGLRRFVLVGHSMGG 106
Cdd:PRK10673  15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMA--QDLLDTLDALQIEKATFIGHSMGG 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 107 ANAFVYAGRDPERLAGLVIEDMGPgasVGSQgsARIKRELletpdgFATW---ADARVFWRRQ-----RPNLPEAALDSR 178
Cdd:PRK10673  93 KAVMALTALAPDRIDKLVAIDIAP---VDYH--VRRHDEI------FAAInavSEAGATTRQQaaaimRQHLNEEGVIQF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 179 VAHSLREHApgrivWRHDAAGIAAARLAATPEQLVDLWPlirslrVPTLLLRGGDSDFLSAQ----VAADMSAANAVIer 254
Cdd:PRK10673 162 LLKSFVDGE-----WRFNVPVLWDQYPHIVGWEKIPAWP------HPALFIRGGNSPYVTEAyrddLLAQFPQARAHV-- 228
                        250       260
                 ....*....|....*....|....*..
gi 981254954 255 vdIAGATHYVHDDRPAAFNGALREWLD 281
Cdd:PRK10673 229 --IAGAGHWVHAEKPDAVLRAIRRYLN 253
PRK05855 PRK05855
SDR family oxidoreductase;
7-124 1.24e-12

SDR family oxidoreductase;


Pssm-ID: 235628 [Multi-domain]  Cd Length: 582  Bit Score: 67.70  E-value: 1.24e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   7 TDGWIVSDGLRLHYVSWGRDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDW-DPRREYYAAAYVRDL 85
Cdd:PRK05855   4 RRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSApKRTAAYTLARLADDF 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 981254954  86 DALVRALGLRRFV-LVGHSMGGANAFVYAGRdpERLAGLV 124
Cdd:PRK05855  84 AAVIDAVSPDRPVhLLAHDWGSIQGWEAVTR--PRAAGRI 121
PRK03204 PRK03204
haloalkane dehalogenase; Provisional
10-278 3.18e-12

haloalkane dehalogenase; Provisional


Pssm-ID: 179554 [Multi-domain]  Cd Length: 286  Bit Score: 65.65  E-value: 3.18e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  10 WIVSDGLRLHYVSWGrdDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDWDPRREYYAAAYVRDLDALV 89
Cdd:PRK03204  18 WFDSSRGRIHYIDEG--TGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFV 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  90 RALGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVIEDMgpgasvgsqgsarikreLLETPDGFATWADARVFWRR--QR 167
Cdd:PRK03204  96 DHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNT-----------------WFWPADTLAMKAFSRVMSSPpvQY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 168 PNLPEAALDSRVAHSLREHAPGRIVWRH----DAAGIAAARLAATPEQLVDLWPLIRSLR---------VPTLLLRG-GD 233
Cdd:PRK03204 159 AILRRNFFVERLIPAGTEHRPSSAVMAHyravQPNAAARRGVAEMPKQILAARPLLARLArevpatlgtKPTLLVWGmKD 238
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 981254954 234 SDFLSAQVAADMSAANAVIERVDIAGATHYVHDDRPAAFNGALRE 278
Cdd:PRK03204 239 VAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIE 283
PLN02578 PLN02578
hydrolase
15-280 4.22e-12

hydrolase


Pssm-ID: 215315 [Multi-domain]  Cd Length: 354  Bit Score: 65.63  E-value: 4.22e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  15 GLRLHYVSWGRddAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDwDPRREYYAAAYVRDLDALVRALGL 94
Cdd:PLN02578  75 GHKIHYVVQGE--GLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSD-KALIEYDAMVWRDQVADFVKEVVK 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  95 RRFVLVGHSMGGANAFVYAGRDPERLAGLVIedMGPGASVGSQGSARIKRELLETP-----------DGFATWADARVFW 163
Cdd:PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVAL--LNSAGQFGSESREKEEAIVVEETvltrfvvkplkEWFQRVVLGFLFW 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 164 RRQRPNLPEAAL----------DSRVAHSLREHA----PGRIVWRhdaagiaAARLAATPEQLVDLWPLIRSLRVPTLLL 229
Cdd:PLN02578 230 QAKQPSRIESVLksvykdksnvDDYLVESITEPAadpnAGEVYYR-------LMSRFLFNQSRYTLDSLLSKLSCPLLLL 302
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 981254954 230 rGGDSDFLSAQVAADMSAA---NAVIERVDiagATHYVHDDRPAAFNGALREWL 280
Cdd:PLN02578 303 -WGDLDPWVGPAKAEKIKAfypDTTLVNLQ---AGHCPHDEVPEQVNKALLEWL 352
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
13-282 5.25e-12

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 64.55  E-value: 5.25e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  13 SDGLRLH---YV-SWGRDDAPAVVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDPRreYYAAAYVRDLDA 87
Cdd:COG1073   18 RDGIKLAgdlYLpAGASKKYPAVVVAHGNGGVKEQRALYAQRLAELgFNVLAFDYRGYGESEGEPR--EEGSPERRDARA 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  88 LVRALGLRRFV------LVGHSMGGANAFVYAGRDPeRLAGLVIEdmGPGASVGSQGSARikrelletpdgfatWADARV 161
Cdd:COG1073   96 AVDYLRTLPGVdperigLLGISLGGGYALNAAATDP-RVKAVILD--SPFTSLEDLAAQR--------------AKEARG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 162 FWRRQRPNLPEAALDSRVahslrehapgrivwrhdaagiaaarlaatpEQLVDLWPLIRSLRVPTLLLRGGDSDFlsaqV 241
Cdd:COG1073  159 AYLPGVPYLPNVRLASLL------------------------------NDEFDPLAKIEKISRPLLFIHGEKDEA----V 204
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 981254954 242 AADMS-----AANAVIERVDIAGATHY-VHDDRPAAFNGALREWLDR 282
Cdd:COG1073  205 PFYMSedlyeAAAEPKELLIVPGAGHVdLYDRPEEEYFDKLAEFFKK 251
PRK14875 PRK14875
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
14-278 1.88e-11

acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional


Pssm-ID: 184875 [Multi-domain]  Cd Length: 371  Bit Score: 63.81  E-value: 1.88e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  14 DGLRLHYVSWGRDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDWDPRR---EYYAAAYVRDLDALvr 90
Cdd:PRK14875 117 GGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAgslDELAAAVLAFLDAL-- 194
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  91 alGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVIedMGPgASVGSQgsarIKRELLetpDGFATwADARvfwRRQRPNL 170
Cdd:PRK14875 195 --GIERAHLVGHSMGGAVALRLAARAPQRVASLTL--IAP-AGLGPE----INGDYI---DGFVA-AESR---RELKPVL 258
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 171 PE----AALDSR--VAHSLREHapgRIVWRHDAAGIAAARLAATPEQLVDLWPLIRSLRVPTLLLRGGDSDFLSAQVAAD 244
Cdd:PRK14875 259 ELlfadPALVTRqmVEDLLKYK---RLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG 335
                        250       260       270
                 ....*....|....*....|....*....|....
gi 981254954 245 MsAANAVIERVDIAGatHYVHDDRPAAFNGALRE 278
Cdd:PRK14875 336 L-PDGVAVHVLPGAG--HMPQMEAAADVNRLLAE 366
PLN02894 PLN02894
hydrolase, alpha/beta fold family protein
24-276 3.91e-11

hydrolase, alpha/beta fold family protein


Pssm-ID: 215484 [Multi-domain]  Cd Length: 402  Bit Score: 63.01  E-value: 3.91e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  24 GRDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASDWDP----RREYYAAAYVRDLDALVRALGLRRFVL 99
Cdd:PLN02894 101 SKEDAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDftckSTEETEAWFIDSFEEWRKAKNLSNFIL 180
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 100 VGHSMGGANAFVYAGRDPERLAGLVIedMGP-GASVGSQGSAR------------IKRELLE---TPD----GFATW--- 156
Cdd:PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLIL--VGPaGFSSESDDKSEwltkfratwkgaVLNHLWEsnfTPQkiirGLGPWgpn 258
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954 157 -----ADARVFWRRQRPNLPEAA---LDSRVAHSLREHAPGRIVWRHDAAGIAAARLaatpeqlvdlwPLIRSL---RVP 225
Cdd:PLN02894 259 lvrryTTARFGAHSTGDILSEEEsklLTDYVYHTLAAKASGELCLKYIFSFGAFARK-----------PLLESAsewKVP 327
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 981254954 226 TLLLRGGDsDFLSAQVAADMSAANAV---IERVDIAGatHYVHDDRPAAFNGAL 276
Cdd:PLN02894 328 TTFIYGRH-DWMNYEGAVEARKRMKVpceIIRVPQGG--HFVFLDNPSGFHSAV 378
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
13-124 7.40e-11

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 60.80  E-value: 7.40e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  13 SDGLRLH---YVSWGRDDAPAVVMLHGL-RSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDPRREYyaaayVRDLDA 87
Cdd:COG1506    5 ADGTTLPgwlYLPADGKKYPVVVYVHGGpGSRDDSFLPLAQALASRgYAVLAPDYRGYGESAGDWGGDE-----VDDVLA 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 981254954  88 LVRAL------GLRRFVLVGHSMGGANAFVYAGRDPERLAGLV 124
Cdd:COG1506   80 AIDYLaarpyvDPDRIGIYGHSYGGYMALLAAARHPDRFKAAV 122
EstA COG1075
Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ...
31-124 8.48e-11

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];


Pssm-ID: 440693 [Multi-domain]  Cd Length: 106  Bit Score: 57.92  E-value: 8.48e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  31 VVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDprreyyAAAYVRD-LDALVRALGLRRFVLVGHSMGG-- 106
Cdd:COG1075    8 VVLVHGLGGSAASWAPLAPRLRAAgYPVYALNYPSTNGSIED------SAEQLAAfVDAVLAATGAEKVDLVGHSMGGlv 81
                         90
                 ....*....|....*...
gi 981254954 107 ANAFVYAGRDPERLAGLV 124
Cdd:COG1075   82 ARYYLKRLGGAAKVARVV 99
PRK00870 PRK00870
haloalkane dehalogenase; Provisional
16-175 2.68e-10

haloalkane dehalogenase; Provisional


Pssm-ID: 179147 [Multi-domain]  Cd Length: 302  Bit Score: 59.98  E-value: 2.68e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  16 LRLHYVSWGRDDAPAVVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDPRREYYA-AAYVRDLDALVRALG 93
Cdd:PRK00870  34 LRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAgHRVIAPDLIGFGRSDKPTRREDYTyARHVEWMRSWFEQLD 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  94 LRRFVLVGHSMGGANAFVYAGRDPERLAGLVIedMGPGASVGSQgsarikrellETPDGFATWADArvfwRRQRPNLPEA 173
Cdd:PRK00870 114 LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVV--ANTGLPTGDG----------PMPDAFWAWRAF----SQYSPVLPVG 177

                 ..
gi 981254954 174 AL 175
Cdd:PRK00870 178 RL 179
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
31-275 2.10e-08

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 53.63  E-value: 2.10e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   31 VVMLHGLrsyAQTWADVAHALTDRYRVVALDQRGRGASDwdprREYYAAAYVRDLDALVRALG-LRRFVLVGHSMGGANA 109
Cdd:pfam12697   1 VVLVHGA---GLSAAPLAALLAAGVAVLAPDLPGHGSSS----PPPLDLADLADLAALLDELGaARPVVLVGHSLGGAVA 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  110 fvYAGRDPERLAGLVIEDMGPGASVGsqgsarikrelletpdgfatwADARVFWRRQRPNLPEAALDSRVahSLREHAPG 189
Cdd:pfam12697  74 --LAAAAAALVVGVLVAPLAAPPGLL---------------------AALLALLARLGAALAAPAWLAAE--SLARGFLD 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  190 RIVWRHDAAGIAAARLAATPEQLVDLWPLIRSLRVPTLLLrgGDSDFLSAQVAADMSAANAVIERVDIAGATHYVHDDrP 269
Cdd:pfam12697 129 DLPADAEWAAALARLAALLAALALLPLAAWRDLPVPVLVL--AEEDRLVPELAQRLLAALAGARLVVLPGAGHLPLDD-P 205

                  ....*.
gi 981254954  270 AAFNGA 275
Cdd:pfam12697 206 EEVAEA 211
pro_imino_pep_1 TIGR01249
proline iminopeptidase, Neisseria-type subfamily; This model represents one of two related ...
12-125 2.71e-08

proline iminopeptidase, Neisseria-type subfamily; This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.


Pssm-ID: 130316 [Multi-domain]  Cd Length: 306  Bit Score: 54.07  E-value: 2.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   12 VSDGLRLHYVSWGRDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGasdwdpRREYYAAAY-------VRD 84
Cdd:TIGR01249  11 VSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPGCRRFFDPETYRIVLFDQRGCG------KSTPHACLEenttwdlVAD 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 981254954   85 LDALVRALGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVI 125
Cdd:TIGR01249  85 IEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVL 125
PLN03084 PLN03084
alpha/beta hydrolase fold protein; Provisional
6-125 3.00e-08

alpha/beta hydrolase fold protein; Provisional


Pssm-ID: 178633  Cd Length: 383  Bit Score: 54.12  E-value: 3.00e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954   6 GTDGWIVSDGLRLHYVSWGRDDAPAVVMLHGLRSYAQTWADVAHALTDRYRVVALDQRGRGASD---WDPRREYYAAAYV 82
Cdd:PLN03084 105 GAQSQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDkpqPGYGFNYTLDEYV 184
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 981254954  83 RDLDALVRALGLRRFVLVGHSMGGANAFVYAGRDPERLAGLVI 125
Cdd:PLN03084 185 SSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLIL 227
PRK11126 PRK11126
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
27-131 1.57e-07

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional


Pssm-ID: 236855 [Multi-domain]  Cd Length: 242  Bit Score: 51.38  E-value: 1.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  27 DAPAVVMLHGLRSYAQTWADVAHALTDrYRVVALDQRGRGAS------DWDPRREYyaaayvrdLDALVRALGLRRFVLV 100
Cdd:PRK11126   1 GLPWLVFLHGLLGSGQDWQPVGEALPD-YPRLYIDLPGHGGSaaisvdGFADVSRL--------LSQTLQSYNILPYWLV 71
                         90       100       110
                 ....*....|....*....|....*....|..
gi 981254954 101 GHSMGGANAFVYA-GRDPERLAGLVIEDMGPG 131
Cdd:PRK11126  72 GYSLGGRIAMYYAcQGLAGGLCGLIVEGGNPG 103
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
28-147 2.02e-07

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 50.74  E-value: 2.02e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  28 APAVVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDPRR------EYYAAAYVRDLDALVRALGLR----- 95
Cdd:COG0412   29 RPGVVVLHEIFGLNPHIRDVARRLAAAgYVVLAPDLYGRGGPGDDPDEaralmgALDPELLAADLRAALDWLKAQpevda 108
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 981254954  96 -RFVLVGHSMGGANAFVYAGRDPeRLAGLVIEDMGPGASVGSQGSARIKRELL 147
Cdd:COG0412  109 gRVGVVGFCFGGGLALLAAARGP-DLAAAVSFYGGLPADDLLDLAARIKAPVL 160
YheT COG0429
Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only];
10-123 6.30e-07

Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only];


Pssm-ID: 440198 [Multi-domain]  Cd Length: 323  Bit Score: 49.76  E-value: 6.30e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  10 WIVSDG--LRLHYVSWGRDDAPAVVMLHGL-----RSYAQTWADVAHALtdRYRVVALDQRGRGASDWDPRREYYAAAyV 82
Cdd:COG0429   41 LELPDGdfVDLDWSDPPAPSKPLVVLLHGLegssdSHYARGLARALYAR--GWDVVRLNFRGCGGEPNLLPRLYHSGD-T 117
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 981254954  83 RDLDALVRAL----GLRRFVLVGHSMGGaNAFV-YAGRDPERLAGL 123
Cdd:COG0429  118 EDLVWVLAHLraryPYAPLYAVGFSLGG-NLLLkYLGEQGDDAPPL 162
YpfH COG0400
Predicted esterase [General function prediction only];
24-124 4.26e-06

Predicted esterase [General function prediction only];


Pssm-ID: 440169 [Multi-domain]  Cd Length: 200  Bit Score: 46.44  E-value: 4.26e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  24 GRDDAPAVVMLHGLRSYAQTWADVAHAL-TDRYRVVAL------DQRGR-------GASDWDPRREYYAAAYVRD-LDAL 88
Cdd:COG0400    1 GGPAAPLVVLLHGYGGDEEDLLPLAPELaLPGAAVLAPrapvpeGPGGRawfdlsfLEGREDEEGLAAAAEALAAfIDEL 80
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 981254954  89 VRALGL--RRFVLVGHSMGGANAFVYAGRDPERLAGLV 124
Cdd:COG0400   81 EARYGIdpERIVLAGFSQGAAMALSLALRRPELLAGVV 118
FrmB COG0627
S-formylglutathione hydrolase FrmB [Defense mechanisms];
22-119 4.94e-05

S-formylglutathione hydrolase FrmB [Defense mechanisms];


Pssm-ID: 440392 [Multi-domain]  Cd Length: 249  Bit Score: 43.67  E-value: 4.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  22 SWGRDDAPAVVMLHGLRSYAQTWADVAHA--LTDRYR--VVALDQRGRGA-SDW--DPRREYYAAAYV-RDLDALVRA-L 92
Cdd:COG0627   27 GYDGRPLPVLYLLHGLTGTHENWTRKTGAqrLAAELGviVVMPDGGQASFyVDWtqGPAGHYRWETYLtEELPPLIEAnF 106
                         90       100       110
                 ....*....|....*....|....*....|..
gi 981254954  93 GL-----RRFVlVGHSMGGANAFVYAGRDPER 119
Cdd:COG0627  107 PVsadreRRAI-AGLSMGGHGALTLALRHPDL 137
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
29-124 5.95e-04

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 40.31  E-value: 5.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  29 PAVVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDPRReYYAAAYVRDLDALVRAL--GLRRFVLVGHSMG 105
Cdd:COG1647   16 KGVLLLHGFTGSPAEMRPLAEALAKAgYTVYAPRLPGHGTSPEDLLK-TTWEDWLEDVEEAYEILkaGYDKVIVIGLSMG 94
                         90
                 ....*....|....*....
gi 981254954 106 GANAFVYAGRDPErLAGLV 124
Cdd:COG1647   95 GLLALLLAARYPD-VAGLV 112
LpqC COG3509
Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and ...
28-125 8.01e-04

Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and metabolism];


Pssm-ID: 442732 [Multi-domain]  Cd Length: 284  Bit Score: 40.37  E-value: 8.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  28 APAVVMLHGlrsYAQTWADVA-----HALTDRYR--VVALDQRGRGAS----DWDPRREYYAAAYVRDLDALVRALGLR- 95
Cdd:COG3509   53 LPLVVALHG---CGGSAADFAagtglNALADREGfiVVYPEGTGRAPGrcwnWFDGRDQRRGRDDVAFIAALVDDLAARy 129
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 981254954  96 -----RFVLVGHSMGGANAFVYAGRDPERLAGLVI 125
Cdd:COG3509  130 gidpkRVYVTGLSAGGAMAYRLACEYPDVFAAVAP 164
PKS_TE smart00824
Thioesterase; Peptide synthetases are involved in the non-ribosomal synthesis of peptide ...
41-161 9.78e-04

Thioesterase; Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.


Pssm-ID: 214835 [Multi-domain]  Cd Length: 212  Bit Score: 39.52  E-value: 9.78e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954    41 AQTWADVAHALTDRYRVVALDQRGRGASDWDPRREYYAAAYVrdLDALVRALGLRRFVLVGHSMGGANAFVYAGRDPER- 119
Cdd:smart00824  12 PHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQ--AEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARg 89
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 981254954   120 --LAGLVIEDMGPGASVGSQG-SARIKRELLETPDGFATWADARV 161
Cdd:smart00824  90 ipPAAVVLLDTYPPGDPAPEGwLPELLRGVFEREDSFVPMDDARL 134
COG4188 COG4188
Predicted dienelactone hydrolase [General function prediction only];
29-114 4.38e-03

Predicted dienelactone hydrolase [General function prediction only];


Pssm-ID: 443342 [Multi-domain]  Cd Length: 326  Bit Score: 38.16  E-value: 4.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 981254954  29 PAVVMLHGLRSYAQTWADVAHALTDR-YRVVALDQRGRGASDWDPRREYYAAAY--------VRD----LDALVR----- 90
Cdd:COG4188   63 PLVVLSHGLGGSREGYAYLAEHLASHgYVVAAPDHPGSNAADLSAALDGLADALdpeelwerPLDlsfvLDQLLAlnksd 142
                         90       100
                 ....*....|....*....|....*....
gi 981254954  91 -----ALGLRRFVLVGHSMGGANAFVYAG 114
Cdd:COG4188  143 pplagRLDLDRIGVIGHSLGGYTALALAG 171
Esterase_713_like-2 cd12809
Uncharacterized enzymes similar to novel bacterial esterase that cleaves esters on halogenated ...
98-130 6.28e-03

Uncharacterized enzymes similar to novel bacterial esterase that cleaves esters on halogenated cyclic compounds; This family contains uncharacterized proteins similar to a novel bacterial esterase (Alcaligenes esterase 713) with the alpha/beta hydrolase fold but does not contain the GXSXXG pentapeptide around the active site serine residue as commonly seen in other enzymes of this class. Esterase 713 shows negligible sequence homology to other esterase and lipase enzymes. It is active as a dimer and cleaves esters on halogenated cyclic compounds though its natural substrate is unknown.


Pssm-ID: 214008  Cd Length: 280  Bit Score: 37.59  E-value: 6.28e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 981254954  98 VLVGHSMGGANAFVYAGRDPERLAGLV-IEDMGP 130
Cdd:cd12809  174 ILITHSQGGPFGWLAADARPDLVKAIVaIEPSGP 207
COG4099 COG4099
Predicted peptidase [General function prediction only];
72-125 9.11e-03

Predicted peptidase [General function prediction only];


Pssm-ID: 443275 [Multi-domain]  Cd Length: 235  Bit Score: 36.87  E-value: 9.11e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 981254954  72 PRREYYAAA-YVRDLDALVRALGLRRFV------LVGHSMGGANAFVYAGRDPERLAGLVI 125
Cdd:COG4099   95 PEDDYWSDTkALDAVLALLDDLIAEYRIdpdriyLTGLSMGGYGTWDLAARYPDLFAAAVP 155
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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