|
Name |
Accession |
Description |
Interval |
E-value |
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
1-616 |
0e+00 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 1096.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 1 MIKKVSLMTALSVTAFSGWAQD-SADSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGM 79
Cdd:PRK10641 1 MIKKASLLTALSVTAFSGWAQDtSPDTLVVTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 80 GANASTFIRGTESRHVLVLIDGIPLNNAGISNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITGRDKPGADI 159
Cdd:PRK10641 81 GQLSSLFIRGTNSSHVLVLIDGVRLNQAGISGSADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 160 TASVGSKGYQSYDGSFQQVL-DKTKITMAGNYTYTRGFDIDAQD---APRQPDRDGFMSKSLYGSIEQQINDSLSGFVRG 235
Cdd:PRK10641 161 SAGWGSNGYQNYDGSTQQQLgDNTRVTLAGDYTYTKGFDVVAYGntgTQAQPDRDGFMSKTLWGGLEHQFNDQWSGFVRG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 236 FGYDNRTAYDGYDSYdnnfnFTGTPDTRQLYSQNWDTGLRYKQGIYQTQLVAGYGRSKDQNYDPSKGRYAASSTMDDVKQ 315
Cdd:PRK10641 241 YGYDNRTDYDAYYSP-----GSPLIDTRQLYSQSWDAGLRYNGGIYSSQLIASYSHSKDYNYDPHYGRYDSSATLDDMKQ 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 316 YTTQWMNTFTVGHGNIGAGVDWQKQQTQAGTGLLDQGFKQHNTGVFLSAMQQFDSVTLEAAARHDDNSNFGNHSTWQTSA 395
Cdd:PRK10641 316 YNVQWGNTVQVGHGNISAGVDWQKQTTTPGTGYVPDGYDQRNTGIYLTGQQQIGDVTLEGAARSDDNSQFGWHGTWQTSA 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 396 AWEFVDGYRIIGSYGTAYKAPTMSQIHSAdYGNPDLKPEESEQWEGGFEGLTGPVTWRISAYRNDVDNLIGFGN-RNRPY 474
Cdd:PRK10641 396 GWEFIDGYRFIASYGTAFKAPNLGQLYGF-YGNPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLIDYDDhTLKYY 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 475 NVDKARIEGVEATAQFDTGPVGHQISYDYVDPRNATTNQVLARRSKQQVKYQLDTQVWDFDWNLAYRYLGTRYDvaVDPN 554
Cdd:PRK10641 475 NVGKATIKGVEWTGNFDTGPLTHQVTLDYVDPRNAITDEPLARRAKQQVKYQLDWQLYDFDWGVTYQYLGTRYD--KDYS 552
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 974590318 555 TFTTERVQMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETVYGYETAGREYTLSGSYTF 616
Cdd:PRK10641 553 TYPYQTVKLGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF 614
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
2-616 |
0e+00 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 681.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 2 IKKVSLMTALS--VTAFSGWAQDSA---DSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQS 76
Cdd:TIGR01779 1 MQKSALAPALAslLTLCSALHANEAqplDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 77 GGMGANASTFIRGTESRHVLVLIDGIPLNNAGiSNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITGR--DK 154
Cdd:TIGR01779 81 GGRGQNTSLFLRGTESDHVLVLIDGIRFGSAA-AGAADFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRrsGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 155 PGADITASVGSKGYQSYD-GSFQQVLDKTKITMAGNYTYTRGFDIDAQ-DAPRQPDRDGFMSKSLYGSIEQQINDSLSGF 232
Cdd:TIGR01779 160 QGTTLSAGLGSLDYQEYSiASGVAIGENGWYSVALGTESTKGINVRPGgPGVYDPDRDGFRSDSLLLGGGHRFDESWSLF 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 233 VRGFGYDNRTAYDGYdSYDNNFNftgtpDTRQLYSQNWDTGLRYKQGIYQTQLVAGYGRSKDQNYDPSKGRYaaSSTMDD 312
Cdd:TIGR01779 240 VNALRYENRNDYDNY-SFGTRLY-----KEAEKGDQSFTGGRQRQSERDVSELTLSTGKSKDWDYAYSKGRY--SSTSDT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 313 VKQYTTQWMNTFTVGHGNIGA-GVDWQKQQTQAGTGllDQGFKQHNTGVFLSAMQQFDSVTLEAAARHDDNSNFGNHSTW 391
Cdd:TIGR01779 312 REQRNIQWQNDLLVGDGWVLAgGVDWQKDSIISSTA--DKEDDRSNTAAFAQVLQQWGQQLLEASLRRDDNQQFGSHTTG 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 392 QTSAAWEFVDGYRIIGSYGTAYKAPTMSQIHSADYGNPDLKPEESEQWEGGFEGLTGPVTWRISAYRNDVDNLIGFGNR- 470
Cdd:TIGR01779 390 SIAWGYQFIEELRFTASYGTAFKAPNLNQLYYPSYGNPNLQPETSKSAELGFYGLFSGGKWSISGYRTKINDLIDYDSHp 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 471 -NRPYNVDKARIEGVEATAQFDTGPVGHQISYDYVDPRNATTNQVLARRSKQQVKYQLDTQVWDFDWNLAYRYLGTRYDv 549
Cdd:TIGR01779 470 kGYPNNIGEARIKGVEATAEFATGGWTHQLSVDLLDAQNVNTGNTLPRRARQMYKWNADRAFEQFDWGASYQYVGKRYD- 548
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 974590318 550 aVDPNTFTTERVQMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETVYGYETAGREYTLSGSYTF 616
Cdd:TIGR01779 549 -DDYNTYPTQNVRLGGYSLLDLRVSYYVTDSWTVQGRIANLFDKDYETAYGYPQAGRAYYLSIRYQF 614
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
5-584 |
5.62e-93 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 298.69 E-value: 5.62e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 5 VSLMTALSVTAFSG-WAQDSADSL---VVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMG 80
Cdd:COG4771 4 ASLLLLLALAAQAAdALAEDATELeevVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 81 ANASTFIRGTESRHVLVLIDGIPLNNAGISNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIIT--GRDKPGAD 158
Cdd:COG4771 84 GSSGISIRGLGGDRVLVLIDGVPVNNPALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITkkPTDELEGS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 159 ITASVGSKGYQSYDGSFQ--QVLDKTKITMAGNYTYTRGF-DIDAQDAPRQPDRDgfmSKSLYGSIEQQINDSLSGFVRG 235
Cdd:COG4771 164 VSLGYGSNGNGTYSGSLSlgGPGDKLSFLLSGSYRDRDGYlDYRNGGFVGNSGYE---RYNLNAKLGYRLSDNHRLSLSG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 236 fGYDNRTAYDGYDSYDNNFNFTGTPDTRQLYSQNWDTGLRYKQGI-YQTQLVAGYGRSKDQNYDPSKGRYAASSTMDDVK 314
Cdd:COG4771 241 -GYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRGNYSLRYNGDLgDNLDLSLYYSRTDRDSTNGSLGGSTGSFSDSDDT 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 315 QYTTQWMNTFTVGHG-NIGAGVDWQKQQTQAGTGLLDQGFKQHNTGVFLSAMQQF-DSVTLEAAARHDDNSNFGNHSTWQ 392
Cdd:COG4771 320 TYGLELDLTYPLGGNhTLTLGAEYRYDDLDSSSFLGGADASRDTYGLFAQDEWKLtDKLTLTAGLRYDYYSTFGASNYTA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 393 TS----AAWEFVDGYRIIGSYGTAYKAPTMSQIHSAD--------YGNPDLKPEESEQWEGGFEGLTGPVTWRISA--YR 458
Cdd:COG4771 400 FSprlgLRYDLSDNLTLRASYGRGFRAPSLAELYGSGtgtpgryvLGNPDLKPETSDNYELGLEYRLGNGGLSLSLtgFY 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 459 NDVDNLI-------GFGNRNRPYNVDKARIEGVEATAQFDTGPVGH-QISYDYVDPR--NATTNQVLARRSKQQVKYQLD 528
Cdd:COG4771 480 TDIKDLIvlvpvgpGPGDVLQYENVGKARTYGLELELKYRLGKGLTlTASYTYLDSKidDGDTGEPLPNVPPHKANLGLD 559
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 974590318 529 TQVWDFDWNLAYRYLGTRYDVAVDPNTFTTERvqmGGVSLWDLAVSYPVTSHLTVR 584
Cdd:COG4771 560 YRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYT---PGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
44-616 |
5.44e-89 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 288.97 E-value: 5.44e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 44 PTSVVTREDIERWQAKSVVEVMQRLPGVDIaQSGGMGANASTFIRGTESRHVLVLIDGIPLNNAGISNVADLSQIPTSLI 123
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVDLNTIPPELI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 124 QRIEYIRGPRSALYGSDAIGGVINIITGR--DKPGADITASVGS-KGYQSYDGSFQQVL-----DKTKITMAGNYTYTRG 195
Cdd:cd01347 80 ERVEVLKGPSSALYGSGAIGGVVNIITKRptDEFGGSVTAGYGSdNSGSSGGGGFDVSGaladdGAFGARLYGAYRDGDG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 196 FDIDAqdapRQPDRDGFMSKSLYGSIEQQINDSLSGFVRGFGYDNRTAYDGYDSYDNNF----------NFTGTPD---- 261
Cdd:cd01347 160 TIDGD----GQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTgsslgggpssNTNGDRDwdyr 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 262 --TRQLYSQNWDTGLRYKQGIYQTQLVAGYGRSKDQNY---------DPSKGRYAASSTMdDVKQYTTQWMNTFTVGHGN 330
Cdd:cd01347 236 drYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLilnggnnaaGGDLGRSGYSSER-DTTQLGFDAGLNAPFGTGP 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 331 IG----AGVDWQKQQtqagtglldqgFKQHNTGVFLSA-MQQFDSVTLEAAARHDD--------------NSNFGNHSTW 391
Cdd:cd01347 315 VAhtltLGVEYRREE-----------LDEKQTALYAQDtIELTDDLTLTLGLRYDHydqdskdtiaggttAKKSYSHWSP 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 392 QTSAAWEFVDGYRIIGSYGTAYKAPTMSQIH-------SADYGNPDLKPEESEQWEGGFEGLTGP-VTWRISAYRNDVDN 463
Cdd:cd01347 384 SLGLVYKLTDGLSLYASYSQGFRAPSLGELYgggshggTAAVGNPNLKPEKSKQYELGLKYDPGDgLTLSAALFRIDIKN 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 464 LI-------GFGNRNRPYNVDKARIEGVEATAQFD-TGPVGHQISYDYVDPRN-----ATTNQVLARRSKQQVKYQLD-- 528
Cdd:cd01347 464 EIvstptntGLGLVTVYVNGGKARIRGVELEASYDlTDGLGLTGSYTYTDTEVkrtdgATTGNRLPGIPKHTANLGLDye 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 529 TQVWDFDWNLAYRYLGTRY-DVAVDPNTFTTervqmGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETV--------Y 599
Cdd:cd01347 544 LPDEGLTAGGGVRYRGKQYaDTANGNNTVKV-----PGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSlsvrgsglY 618
|
650
....*....|....*..
gi 974590318 600 GYETAGREYTLSGSYTF 616
Cdd:cd01347 619 GYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
25-606 |
2.99e-67 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 231.26 E-value: 2.99e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 25 DSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGmgANASTFIRG--TESRHVLVLIDGI 102
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGG--GAGQISIRGfgGGGNRVLVLVDGV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 103 PLNNAGiSNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIIT--GRDKPGADITASVGSKGYQSYDGSFQQVLD 180
Cdd:COG1629 80 PLNDPS-GGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTkkPKDGKGGEVSASYGSYGTYRASLSLSGGNG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 181 KTKITMAGNYTYTRGFdidaqdaprqPDRDGFMSKSLYGSIEQQINDSLSGFVRGFGYDNRTAYDGYDSYDNNFNFTGTP 260
Cdd:COG1629 159 KLAYRLSASYRDSDGY----------RDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 261 DTRQLYSQNWDTGLRYKQGI---YQT-------QLVAGY---GRSKDQNYDPSKGRYA-ASSTMDDVKQYTTQWMNTFTV 326
Cdd:COG1629 229 DGTNPYSNDTDDNTRDRYSLsleYEHlgdglklSASAYYrydDTDLDSDFTPTPADGGtLEQTDFDNRTYGLELRLTYDL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 327 GHG---NIGAGVDWQKQQTQA--------------GTGLLDQGFKQHNTGVFLSAMQQF-DSVTLEAAARHDDNSNFGNH 388
Cdd:COG1629 309 GFGgkhTLLVGLDYQRQDLDGsgypldlgsgslptLTSGADDDGTTTSLALYAQDTYKLtDKLTLTAGLRYDYVSYDVDD 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 389 STWQT----------------SAAWEFVDGYRIIGSYGTAYKAPTM-----SQIHSADYGNPDLKPEESEQWEGGFEG-- 445
Cdd:COG1629 389 TVTGTdsasgsrsysafspslGLTYQLSPNLSLYASYSRGFRAPTFgelyaNGTDPYSVGNPDLKPETSTNYELGLRYrl 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 446 LTGPVTWRISAYRNDVDNLI-------GFGNRNRPYNVDKARIEGVEATAQFDTGPVGH-QISYDYVDPRN--------A 509
Cdd:COG1629 469 LDGRLSLSLALFYSDVDNEIlsvplpnDSGFSTYYTNAGKARSYGVELELSYQLTPGLSlNASYSYTDAKFdddtdgsaD 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 510 TTNQVLARRSKQQVKYQLDTQVWD-FDWNLAYRYLGTRYDVAVDPNTFttervqMGGVSLWDLAVSYPVTSHLTVRGKIA 588
Cdd:COG1629 549 LDGNRLPGVPPLTANLGLTYEFPGgWSLGLGVRYVGDRYLDDANTQGA------PGGYTLVDLGAGYRFGDNLTLSLGVD 622
|
650
....*....|....*...
gi 974590318 589 NLFDKDYETVYGYETAGR 606
Cdd:COG1629 623 NLFDKKYATSLSVRASNV 640
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
28-298 |
4.32e-64 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 212.42 E-value: 4.32e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 28 VVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGANASTFIRGTESRHVLVLIDGIPLNNA 107
Cdd:COG4206 2 VVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQTLVLIDGVPLNDP 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 108 GISNVaDLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIIT--GRDKPGADITASVGSKGYQSYDGSFQQVLDKTKIT 185
Cdd:COG4206 82 SLGGV-DLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTkkGKKGFKGSVSASYGSFGTRRLSASLSGGAGKFSYS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 186 MAGNYTYTRGFDIdaqDAPRQPDRDGFMSKSLYGSIEQQINDSLSGFVRGFGYDNRTAYDGYDSYDNNFNFTGTPDTRql 265
Cdd:COG4206 161 LSASYRRSDGYRY---NDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRLSLSLEYK-- 235
|
250 260 270
....*....|....*....|....*....|...
gi 974590318 266 YSQNWDTGLRYKQGIYQTQLVAGYGRSKDQNYD 298
Cdd:COG4206 236 LSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTD 268
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
6-616 |
1.02e-60 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 213.98 E-value: 1.02e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 6 SLMTALSVTAfsgwAQDSADSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVdiaQSGGMGANAST 85
Cdd:PRK10064 16 AISCAWPVLA----VDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGV---QLTNEGDNRKG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 86 F-IRGTESRHVLVLIDGIPLNNAGI---SNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITgrDKPGADITA 161
Cdd:PRK10064 89 VsIRGLDSSYTLILIDGKRVNSRNAvfrHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIIT--KKIGQKWHG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 162 SVgskgyqSYDGSFQQVLDKTKiTMAGNYtYTRGfdidaqdaprqPDRDGFMSKSLYGSI------EQQINDSLSGfvrg 235
Cdd:PRK10064 167 TV------TVDTTIQEHRDRGD-TYNGQF-FTSG-----------PLIDGVLGMKAYGSLakrekdDPQNSTTTDT---- 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 236 fGYDNRTayDGYDSYDNNFNFTGTP----------------------DTRQLYSQNWDTGLRYKQGIYQTQLVAgYGrSK 293
Cdd:PRK10064 224 -GETPRI--EGFTSRDGNVEFAWTPnqnhdftagygfdrqdrdsdslDKNRLERQNYSLSHNGRWDYGNSELKY-YG-EK 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 294 DQNYDP--SKGRYAASSTMDDvkQYT---TQWMNTFTVGHgnigagvDWQKQQTQAGTGLldQGFKQHNTgvflSAMQQ- 367
Cdd:PRK10064 299 VENKNPgnSSPITSESNSIDG--KYTlplTAINQFLTFGG-------EWRHDKLSDAVNL--TGGTSSKT----SASQYa 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 368 ---------FDSVTLEAAARHDDNSNFGNHSTWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQIhSADY------------ 426
Cdd:PRK10064 364 lfvedewriFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQL-SPDWtsnscrgackiv 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 427 GNPDLKPEESEQWEGGF-----EGLTGPVTWRISAYRNDVD------------------NLIGF---GNRNRP-----YN 475
Cdd:PRK10064 443 GSPDLKPETSESWELGLyymgeEGWLEGVESSVTVFRNDVDdrisisrtsdvnaapgyqNFVGFetnGRGRRVpvfryYN 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 476 VDKARIEGVEATAQFdtgPVGHQ----ISYDYVDPRNATT--NQVLARRSKQQVKYQLD---TQVWDFDWNLAYRYLGTR 546
Cdd:PRK10064 523 VNKARIQGVETELKI---PFNDEwklsLNYTYNDGRDVSNgeNKPLSDLPFHTANGTLDwkpLALEDWSFYVSGNYTGQK 599
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 974590318 547 YDVAVDPNTfttervqMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYE-TVYGYETAGREYTLSGSYTF 616
Cdd:PRK10064 600 RADSATAKT-------PGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSrDDYSYNEDGRRYFMAVDYRF 663
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
24-616 |
2.35e-56 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 201.85 E-value: 2.35e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 24 ADSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIaQSGGMGANASTFIRGTESRHVLVLIDGIP 103
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDV-TGGGRPPGQSINIRGLQDNRVLVVVDGAR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 104 LNNAGISNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIIT--GRD--KPGADITASVgSKGYQSYDGSFQQ-- 177
Cdd:TIGR01785 80 QNYQRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTkdAADllRPGQLFGGLA-KLSYGSNNNSFGGsv 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 178 ---VLDKTKITMAGNYTYTRGFDIDaQDAPRQPDRDGFMSKSLYGSIEQQINDSLSGfvrGFGYdnRTAYDGYDSYDNNF 254
Cdd:TIGR01785 159 avaGRLDDNLDALVAATYRDGGNYR-NGNKEEATNSAYVQKNLLAKLGWQLDDAQRL---EFSY--FTTEGSLDEAQNSG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 255 nftgtPDTRQLYSQNW----------DTGLRY----KQGIYQTQLVAGYGRSKDQNYDPSKGRYAASSTMDDvKQYTTQW 320
Cdd:TIGR01785 233 -----PGTEYVLGSSStllasstrdrSATLTYnwtpEDNPWLDATASLYYNRTENDNDRSARGVGREEGYQY-TTYGATL 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 321 MNTFTVGHGN---IGAGVDW--QKQQTQAGTGLLDQGF-------KQHNTGVFLSAMQQF--DSVTLEAAARHD-----D 381
Cdd:TIGR01785 307 QNTSRFDVASwstLTYGVDWmkDKRRTESFDPNSVTTIvpnppsaKEYFFGLFLQDNIPLldDRLTLSAGLRYDhyklsP 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 382 NSNFG------NHSTWQTSAA--WEFVDGYRIIGSYGTAYKAPTMSQI-----HSAD------YGNPDLKPEESEQWEGG 442
Cdd:TIGR01785 387 KTTADteavdrSYSRWSPSLGlsYKPVDWLTLYASYSQGFRAPSIDELygtgdHPGTpggytfAPNPNLKPETSKTWELG 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 443 FeGLTGPVTW--------RISAYRNDVDNLI--GFGNRNRPY----------NVDKARIEGVEATAQFDTGPVGHQISYD 502
Cdd:TIGR01785 467 A-NLSFDNLLldndqlqfKVAYFYNDVKDFIdlTIGVTDNVTagmnnitqyvNIDGARIRGIEASASYDAGLWATGLSYG 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 503 YVDPRNATTNQVLARRSKQQVKYQLDTQV--WDFDWNLAYRYLGTRYDVAVDPNTFTTERVQMGGVSLWDLAVSYPVT-- 578
Cdd:TIGR01785 546 YTIGKDQNTNQWLSNIPPLKLVVTVGYRFpdRRLDLGAKAAYYERQSESPTTEDVAANGLLTTPGYTVVDLYATYQPNav 625
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 974590318 579 SHLTVRGKIANLFDKDYETVYGY--ETAGREYTLSGSYTF 616
Cdd:TIGR01785 626 KGLTVRFGVNNLTDRKYTPAQSVpgAGPGRNFKGSVKYQF 665
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
25-616 |
3.77e-55 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 199.18 E-value: 3.77e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 25 DSLVVTANRFEQPANT----VLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGANaSTFIRGTESRHVLVLID 100
Cdd:TIGR01786 1 DTITVTATRTADPQRRdlsvTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEGGRGGSQ-GINIRGLDKNRVAVLVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 101 GIPLN----NAGISNVADLSqIPTSLIQRIEYIRGPRSALYGSDAIGGVINIIT--GRD--KPGADItaSVGSK-GYQSY 171
Cdd:TIGR01786 80 GIRQNtsygGQGSTFYAINS-IDPELIKSIEIVKGASSSLYGSGALGGVVAFRTkdAADllKPGKDL--GGLSKlGYSSA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 172 DGSFQQVL----DKTKITMAGNYTYTRGFDIDA--------QDAPRQPDRDGFMSKSLYGSIEQQINDS--LSGFVRGFG 237
Cdd:TIGR01786 157 NNRFTQSVaaagRNDDVDALVQATYRRGHELKNgnkanignESKRSKPNPSDYKSQSFLAKLGWQLNDAhrLGLSLEYTQ 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 238 YDNRTAYDGYDSYDNNFNFTGTPDTRQLY--SQNWD--TGLRY-----------KQGIYQTQLVAGYGR-----SKDQNY 297
Cdd:TIGR01786 237 TDYDEPEMTNTSYLTKPLGAPLLSSTVVLgdSKTRDrrTGLDYelnpdnswldtVKLALDKQYIQLYNYlnatsASDYPG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 298 DPSKGRYaasstmDDVKQYTTQWMNT-----FTVGHGNIGAGVDWQKQQTQAG--------TGLLDQGF-------KQHN 357
Cdd:TIGR01786 317 VDKNGRY------KDKYDYYTLGFDTnnkieFSVHSLSLTYGLDRFKDKVSTGdsrrnlptAAYNLYGYegenrpvKGSN 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 358 TGVFLSAMQQF-DSVTLEAAARHDDNSN----------------FGNHStWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQ 420
Cdd:TIGR01786 391 FGLFLQDNIKLgDWLSLSAGLRYDHYKTdpkadeskdygaisktYSRWS-PSLGLTYKPTPWLTLYYSYSQGFRAPSFDE 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 421 I-----HSAD-----YGNPDLKPEESEQWEGGFEGLTGPVTWRISAYRNDVDNLI-------GFGNRNRPY--------N 475
Cdd:TIGR01786 470 LygtgaHPGGgpytfLPNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIdlgigvtAKGNMAQVGsntitnyvN 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 476 VDKARIEGVEATAQFDTGPVGHQI-------SYDYVDPRNATTNQVLA----RRSKQQVKYQLDTQVWDFDWNLAY---- 540
Cdd:TIGR01786 550 IDNARIRGIELSGRYDLGSFFSGPdgwtttlKYGYTKGKDSDTNPWLNaitpLKVVLGLGYDHPDEKWGVGLTLTFsgak 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 541 RYLGTRYDVAVDPNTFTTERVQMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDY----------ETVYGYETAGREYTL 610
Cdd:TIGR01786 630 DAVDAYATYYENGEAAKAGPLRTPSYTVVDLYGYYKPNKNLTLRFGVYNLLDRKYttwesarqagPLATGYTAPGRNYKA 709
|
....*.
gi 974590318 611 SGSYTF 616
Cdd:TIGR01786 710 SVEYKF 715
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
2-616 |
2.70e-52 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 190.91 E-value: 2.70e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 2 IKKVSLMTALSVTAFSGWAQDSADSLVVTANRF-EQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMG 80
Cdd:COG4772 1 MRRALAAALLLAAAAAAEAATTLETVVVTGSRAaEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 81 ANASTFIRGT---ESRHVLVLIDGIPLNNAGIS-NVADLSQIPTSlIQRIEYIRGPRSALYGSDAIGGVINIIT--GRDK 154
Cdd:COG4772 81 LRPNIGIRGLgprRSRGITLLEDGIPIAPAPYGdPAAYYFPDLER-MERIEVLRGAAALRYGPQTVGGAINFVTrtIPTA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 155 PGADITASVGSKGYQSYDGSFQQVLDKTKITMAGNYTYTRGFdidaqdaprqpdRD--GFMSKSLYGSIEQQIND--SLS 230
Cdd:COG4772 160 FGGELRVTGGSFGYRRTHASVGGTVGNFGYLVEYSRKRGDGF------------RDnsGFDINDFNAKLGYRLSDrqELT 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 231 GFVRGFGYDNRTAY---------DGYDSYDNNFNFtgtpDTRQlysqnWDTGLRYKQGIY-QTQL-VAGYG--RSKDQNY 297
Cdd:COG4772 228 LKFQYYDEDANTPGgltdaqfdaDPRQSYRPADQF----DTRR-----TQLSLRYEHQLSdNTTLtTTAYYndFSRNWYI 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 298 DPSKGRYAASSTMDDVK--QYTTQ-----WMNTFTVG--HGNIGAGVDWQK-----QQTQAGTGLLDQGFKQ-------- 355
Cdd:COG4772 299 RQNTADPNTPGLGLRGNprGYRSYgieprLTHRFELGgvPHTLEVGLRYHReeedrKQYVNTYGQGRSGAGLrrdrrfsa 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 356 HNTGVFLSAMQQF-DSVTLEAAARHD----DNSNFGNHSTWQT--------------SAAWEFVDGYRIIGSYGTAYKAP 416
Cdd:COG4772 379 DALAAYAQNRFELtGRLTLTPGLRYEhirrDRTDRYSTRTGGDdsgsnsyseflpglGLLYQLTDNLQLYANVSRGFEPP 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 417 TMSQIHSADYGNPDLKPEESEQWEGGFEG-LTGPVTWRISAYRNDVDNLIGF-----GNRNRPYNVDKARIEGVEATAQF 490
Cdd:COG4772 459 TFGDLAYGNGGNPDLKPEKSWNYELGTRGrIGNGLSAEVALFYIDYDNELGScsaagGDRSTFTNAGETRHQGLELALDY 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 491 DTGPVGHQ-----ISYDYVDPR--NATTNQVLARR----SKQQVKYQLDTQVWDFDWNLAYRYLGTRYdvAVDPNTFTTE 559
Cdd:COG4772 539 DLLKGGGLglplfAAYTYTDAEftSDFGPVFAGNRlpyvPRHQLTAGLGYEHGGWTANLNGRYVSEQF--TDAANTVADG 616
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 974590318 560 RV-QMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYET------VYGYETA-GREYTLSGSYTF 616
Cdd:COG4772 617 SFgKIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIAsrapnyAAGIRPGpPRTVYAGLRLKF 681
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
10-616 |
2.95e-44 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 168.15 E-value: 2.95e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 10 ALSVTAFSGWAQDSADSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGANaSTFIRG 89
Cdd:COG4773 34 EVTVTGTAEGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGGRD-SFSIRG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 90 TESRHVLvlIDGIPLNNAGisnvadLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITGR--DKPGADITASVGSKG 167
Cdd:COG4773 113 FSIDNYL--RDGLPLGGFG------GGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRptAEPQGEVSLSAGSWD 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 168 YQSYDGSFQQVLDKTKiTMAGnytytRgFDIDAQDAPRQPDRDGFMSKSLYGSIEQQINDSLS------------GFVRG 235
Cdd:COG4773 185 TYRATADVGGPLNEDG-TLRY-----R-LNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTltlgaeyqdddsTGDRG 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 236 F--------GYDNRTAYDGYDSYDNNFNFTGTPDTRQLYSQNW--DTGLRYKQGIYQTQLVAGYGrskdqNYDPSKGRYA 305
Cdd:COG4773 258 FlpldgtllDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWslRANARYSDSDRDGRSAYAYG-----APDAATGTLT 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 306 --ASSTMDDVKQYTTQWM-----NTFTVGHgNIGAGVDWQKQ---QTQAGTGLLD------------------QGFKQHN 357
Cdd:COG4773 333 ryASARDGDSRSDSLDANlngkfETGGLEH-TLLVGADYSRYdsdSDSATAGTINiynpvygnlpepdfdasdTDTTTRQ 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 358 TGVFLSA-MQQFDSVTLEAAARHDDNSNFGNHS-------------TWQTSAAWEFVDGYRIIGSYGTAYKAPTmsqihS 423
Cdd:COG4773 412 TGLYAQDqISLTDRLSLLLGGRYDWYETDSTNRlggsttsyddsafTPRAGLVYDLTPGLSLYASYSESFEPQS-----G 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 424 ADYGNPDLKPEESEQWEGG--FEGLTGPVTWRISAYRNDVDNLIGFGNRNRPYNV--DKARIEGVEATAqfdTGPVGHQI 499
Cdd:COG4773 487 ADNNGNPLDPETGKQYEAGvkGELFDGRLNATLAVFDITQKNVATTDPDNPNFYVqvGEVRSRGVELEL---SGELTPGL 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 500 ----SYDYVDPR-----NATTNQVLARRSKQQVK----YQLDTQVWD-FDWNLAYRYLGTRYdvAVDPNTFTtervqMGG 565
Cdd:COG4773 564 nliaGYTYTDAKitkdaDALEGKRLTNVPRHTASlwttYRFPSGALKgLGLGGGVRYVGERY--GDAANTFT-----LPS 636
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 974590318 566 VSLWDLAVSYPVTSHLTVRGKIANLFDKDYETVYGYET-----AGREYTLSGSYTF 616
Cdd:COG4773 637 YTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGyvyygAPRNVRLSLSYKF 692
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
46-616 |
3.68e-44 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 166.98 E-value: 3.68e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 46 SVVTREDIERWQAKSVVEVMQRLPGVdIAQSGGMGANASTFIRGTESRhVLVLIDGIPLNNAgisnvadlSQIPTSLIQR 125
Cdd:COG4774 14 TVVTRELIEDQGATSLADALRNVPGV-TFGAGEGGNGDSFSIRGFSAS-GDIYVDGLRDPGQ--------YRRDTFNLER 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 126 IEYIRGPRSALYGSDAIGGVINIITGR--DKPGADITASVGSKGYQS---------------------------YDGSFQ 176
Cdd:COG4774 84 VEVLKGPASVLYGRGSPGGVINLVTKRptDEPFTEVTLTYGSDGQRRatldvngplgddlayrlngmyrdsdsyRDGVDN 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 177 -----------QVLDKTKITMAGNY-----TYTRGFDIDAQDAPRQPDRDGFM----------SKSLYGSIEQQINDSLS 230
Cdd:COG4774 164 drwgiapsltwRLGDRTRLTLDYEYqdddrTPDYGVPAVANGRPVDVDRSTFYgqpddysdseTDSATLRLEHDFNDNWT 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 231 GFvrgfgydNRTAYDGYDSYDNNFNFTGTPDTRQLYSQNWDTGLRYKQGIYQTQLVAgygrskDQNYDPSKGRYAASSTM 310
Cdd:COG4774 244 LR-------NALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTG------KFDTGGVKHTLLAGVEY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 311 DDVKQYTTQWMNTFTVGHGNIGAGVDWQKQQTQAGTGLlDQGFKQHNTGVFLSAMQQF-DSVTLEAAARHD------DNS 383
Cdd:COG4774 311 SREDSDNARYSGGGTAPTVNLYNPVYGAPVTGPTLGGA-DNDSRTDTTGLYLQDTISLtDRWSLLAGLRYDrfdtdyTDR 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 384 NFGNHS--------TWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQihSADYGNPDLKPEESEQWEGG--FEGLTGPVTWR 453
Cdd:COG4774 390 TTGATTssyddsafSPRAGLVYKPTPNLSLYASYSTSFNPGGGAP--SLSNAGQALDPEKSRQYEVGvkWDLLDGRLSLT 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 454 ISAYRNDVDNLI--GFGNRNRPYNVDKARIEGVEATAqfdTGPVGHQIS----YDYVDPR------NATTNQVLARRSKQ 521
Cdd:COG4774 468 AALFRIEKTNVRttDPANPGVYVQTGEQRSRGVELEA---TGELTPGWSvlagYTYLDAEitksanAANVGNRLPNVPRH 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 522 Q----VKYQLDTQVWDFdwNLAYRYLGTRYdvAVDPNTFTtervqMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDY-E 596
Cdd:COG4774 545 SaslwTTYDLPLPGLTL--GGGVRYVGSRY--ADAANTVK-----LPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYyA 615
|
650 660
....*....|....*....|....
gi 974590318 597 TVYGYET----AGREYTLSGSYTF 616
Cdd:COG4774 616 SAYGSGYvtpgAPRTVLLSASYRF 639
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
10-614 |
7.08e-44 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 167.12 E-value: 7.08e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 10 ALSVTAFSGWAQDSA-DSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGANASTFIR 88
Cdd:PRK13486 10 VIPCLGFSASSIAAAeDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIR 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 89 GTESRHVLVLIDGIPLNNA------GISNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITGR--DKPGADIT 160
Cdd:PRK13486 90 GMPASYTLILIDGVRQGGSsdvtpnGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKnaDKWLSSVN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 161 ASVGSKGYQSYDGSFQqvldktkitmaGNYtYTRGfdidaqdaprqPDRDGFMSKSLYGSIEQQINDSLSGFVrgfgyDN 240
Cdd:PRK13486 170 AGLNLQESNKWGNSSQ-----------FNF-WSSG-----------PLVDDSVSLQVRGSTQQRQGSSVTSLS-----DT 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 241 RTAYDGYDSYDNNFNFTGTPD---------------TRQLYSQN----------WDTGLRYKQGI----YQTQLVAGYGR 291
Cdd:PRK13486 222 AATRIPYPTESQNYNLGARLDwkaseqdvlwfdmdtTRQRYDNRdgqlgsltggYDRTLRYERNKisagYDHTFTFGTWK 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 292 SK-DQNYDPSKGRYAASSTMDDVK----------QYTTQWMNTF---TVGHGN-IGAGVDWQKQQTQAGTGLLDQG--FK 354
Cdd:PRK13486 302 SYlNWNETENKGRELVRSVLKRDKwglagqprelKESNLILNSLlltPLGESHlVTVGGEFQSSSMKDGVVLASTGetFR 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 355 QHNTGVFLSAMQQF-DSVTLEAAARHDDNSNFGNHSTWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQIHSA--------- 424
Cdd:PRK13486 382 QKSWSVFAEDEWHLtDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGisgvsgqgk 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 425 --DYGNPDLKPEESEQWEGGF-----EGLTGPVTWRISAYRNDVDNLIGFGNRNRPYNVDKARIEGVEATAQFD--TGPV 495
Cdd:PRK13486 462 tnLLGNPDLKPEESVSYEAGVyydnpAGLNANVTGFMTDFSNKIVSYSINDNTNSYVNSGKARLHGVEFAGTLPlwSEDV 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 496 GHQISYDYVDPRNATTNQV---LARRSKQQVKYQLDTQVWD--FDWnLAYRYLG------TRYD--VAVDPNTFTTERVQ 562
Cdd:PRK13486 542 TLSLNYTWTRSEQRDGDNKgapLSYTPEHMVNAKLNWQITEevASW-LGARYRGktprftQNYSslSAVQKKVYDEKGEY 620
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 974590318 563 MGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETVYGYEtAGREYTLSGSY 614
Cdd:PRK13486 621 LKAWTVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYS-AGKSTLYAGDY 671
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
226-615 |
9.48e-40 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 151.85 E-value: 9.48e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 226 NDSLSGFVRGFGYDNRTAYDGYDSYDNNFNFTGTPDTRQLYSQNWDTGLRYkQGIYQTQLVAGYGRSKDQNYDpSKGRYA 305
Cdd:pfam00593 37 YGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRY-SSLDGDYTSNSSGLSGAGDYL-SDDRLY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 306 ASSTMDDVKQYTTQWMNTFTVGHGNIGAGVDWQKQQTQ--------AGTGLLDQGFKQHNTGVFLSAMQQF-DSVTLEAA 376
Cdd:pfam00593 115 GLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDaydpydpaNPSSSSYSDTTTDSYGLYLQDNIKLtDRLTLTLG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 377 ARHDDNSNFG--------------NHSTWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQIHS---------ADYGNPDLKP 433
Cdd:pfam00593 195 LRYDHYSTDGddgngggdnfsrsySAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGsgsgggggaVAGGNPDLKP 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 434 EESEQWEGGFEGLTGPVTWRISAYRNDVDNLI--------GFGNRNRPYNVDKARIEGVEATAQ---FDTGPVGHQISY- 501
Cdd:pfam00593 275 ETSDNYELGLKYDDGRLSLSLALFYIDIKNLItsdpdgpgLGGTVYTYTNVGKARIRGVELELSgrlWGLGLSGGGYTYt 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 502 -DYVDPRNATTNQVLARRSKQQ----VKYQLDTQVWDFDWNLAYRYLGTRYDVAVDPNTFTtervqmGGVSLWDLAVSYP 576
Cdd:pfam00593 355 dADDDADADDTGNPLPNVPRHTanlgLTYDFPLGGWGARLGARYVGSGERRYGDAANTFKT------PGYTLVDLSAGYR 428
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 974590318 577 VTSHLTVRGKIANLFDKDYETVY--------GYETAGREYTLSGSYT 615
Cdd:pfam00593 429 LNKNLTLRLGVNNLFDKYYKRYYssgggnlgGYPGPGRTFYLGLSYK 475
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
9-616 |
4.41e-39 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 152.61 E-value: 4.41e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 9 TALSVTAFSGWAQDSA---DSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIaqSGGmGANAST 85
Cdd:PRK13513 17 AAISSQAYAAEKTNTAtptDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVV--TGG-GSTSDI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 86 FIRGTESRHVLVLIDGIPLNNAGISNVADLSQI------PTSLIQRIEYIRGPRSALYGSDAIGGVINIITGRdkpgadi 159
Cdd:PRK13513 94 SIRGMAAKYTLILVDGKRVDTRSTRPNSDGSGIeqgwlpPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRK------- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 160 tASVGSKGYQSYDGSFQQvlDKTKITMAGNYTYTRGfdidaqdaprqPDRDGFMSKSLYGSIEQQINDSLSGfvrgfGYD 239
Cdd:PRK13513 167 -VQKEWHGSLRADATLQE--DSKSGDIFQTNAYASG-----------PLIDGLLGLKVSGLLSHRSEDKIID-----GYN 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 240 NRTAYDGydsydnNFNFTGTPDTRQLYsqNWDTGlRYKQGIYQTQlvagyGRSKDQNYDPSKGRYAASS----------- 308
Cdd:PRK13513 228 EQRMRNG------TATFSLTPDDNNEF--DFEIG-RYVQDRNSTP-----GRTLALNGTNSDTQYDRNNyaithngyydf 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 309 -TMD-------------DVKQYTTQWMN--TFTVG-HG-NIGAGVDWQK---QQTQAGTGLLDQGFKQHNTGVFLS-AMQ 366
Cdd:PRK13513 294 gNSTsyiqrdetrnpsrQMKSVDTIFNTqtSFLLDdHTlSLGGQYRYEElydKGNQLPSASDLNKLTRWSWALFAEdEWQ 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 367 QFDSVTLEAAARHDDNSNFGNHSTWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQIhSAD--------------YGNPDLK 432
Cdd:PRK13513 374 MTNDFALTGGIRMDQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQA-TDNwgqltgggglpaliLGNSDLK 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 433 PEESEQWEGGF-----EGLTGPVTW-------RISAYRN----DVDNLIGFGNRNRPY-----NVDKARIEGVEATAqfd 491
Cdd:PRK13513 453 PEKSISQEIGIlwdnqENLNASVTLfntdfkdKITEVRNcdttNTDGQCVFNGINYDFisdriNVDKANMRGVEATF--- 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 492 tgpvGHQIS--------YDYVDPRNATTN---QVLARRSKQQVKYQLDTQVW-DFD-WN-LAYRYLGTRYdvavdpntft 557
Cdd:PRK13513 530 ----NWDINqawslatnYTFTQSEQKSGAfagQPLNQMPKHMANATLNWQTTeDFAtWIrINYRGKTSEY---------- 595
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 974590318 558 TERVQMG----GVSLWDLAVSYPVTSHLTVRGKIANLFDK--DYETvYGYETAGREYTLSGSYTF 616
Cdd:PRK13513 596 LNRTSMGsgtpSYTFVDLGASYQLTKELRLMGGVYNLLDKrvDIDV-NDKVLDGRRYMVGASYDF 659
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
5-616 |
1.18e-38 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 151.47 E-value: 1.18e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 5 VSLMTALS-VTAFSGWAQDSADS----LVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVdIAQSGGM 79
Cdd:PRK13483 9 ISALCLLPaVFVTHALAQAAPDKtmetVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGV-VVTGGGD 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 80 GANAStfIRGTESRHVLVLIDGIPLN------NAGISNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITgRD 153
Cdd:PRK13483 88 RTDIS--LRGMGSQYTLILVDGKRQSsretrpNSDGPGVEQAWTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIIT-RK 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 154 KPG-------ADITASVGSKGYQSYDGSFqqvldktkitmagnytYTRGfdidaqdaprqPDRDGFMSKSLYGSIEQQIN 226
Cdd:PRK13483 165 VPNewqgevrLDTTLQENSDSGNVYQANF----------------FVNG-----------PLIKDLLGLQLYGQYTQREE 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 227 DSLSGfvrgfGYDNRTAydgyDSYDNNFNFTGTPD---------TRQLYSQNWDTGLRyKQGIYQTQLVAGYGRSKDQNY 297
Cdd:PRK13483 218 DDIEG-----GYRDKDA----RSLTAKLALTPNEDhdimlevgtSNQERDSTVGKTVA-PLAPGESCGRRGCPESSTTEY 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 298 DPSK------GRYAASSTMDDVKQ----------------YTTQWMNTFTVGHgNIGAGVDWQKQQtqagtgLLDQGFKQ 355
Cdd:PRK13483 288 ERSTvslshtGRWDFGTSDTYIQHeefdnksremkikntdFQSSLVAPLGQEH-TLTFGAAYNHQD------LTDETSNQ 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 356 HNTGVFLSAMQQ----------FDSVTLEAAARHDDNSNFGNHSTWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQIhSAD 425
Cdd:PRK13483 361 ISDLTDISRTQWavfsedewriADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQT-TPD 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 426 ----------YGNPDLKPEESEQWEGGF-----EGLTGPVTwrisAYRNDVDNLIG---------------FGNRNRPY- 474
Cdd:PRK13483 440 wgqvsrggniYGNPDLKPETSLNKELGLyydlgSGLTASLT----VFYNEFKDKITrvacpatqctdgpnqFGADPTTYv 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 475 NVDKARIEGVEATAQFD-TGPVGHQISYDYVDPRNATTN---QVLARRSKQQVKYQLDTQVWDfDWNLAYR--YLGTRYD 548
Cdd:PRK13483 516 NIDEAVTQGVEASLSYPiTSTLSLSGNYTYTDSEQKSGAykgSPLNQLPKHLFQASLNWEPTD-RLNSWARvnYRGEESQ 594
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 974590318 549 VAVDP--NTFTTErvqmgGVSLWDLAVSYPVTSHLTVRGKIANLFDKDY-ETVYGYETAGREYTLSGSYTF 616
Cdd:PRK13483 595 PTTGPssSSFIAP-----SYTFLDLGANYQLTDNLKLSAGIYNLFDKEInYEEYGYVEDGRRYWLGMTYSF 660
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
1-616 |
5.77e-38 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 149.79 E-value: 5.77e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 1 MIKKVSLMTALSVT-----AFSGWAQDSA---------DSLVVTANRfeqpaNTVLAP-TSVVTREDIE-RWQAKSVVEV 64
Cdd:PRK13524 1 MNKKIHSLALLVNLgiygvAQAAEAEDAKtddtpasheDTIVVTAAE-----QNLQAPgVSTITAEDIRkRPPANDVSEI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 65 MQRLPGVDI---AQSGGMGANASTFIRGTESRHVLVLIDGIPLN--NA------GISNV-ADLSQIPTSLIQRIEYIRGP 132
Cdd:PRK13524 76 IRTMPGVNLtgnSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSsrNSvrygwrGERDTrGDTNWVPPEMIERIEVLRGP 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 133 RSALYGSDAIGGVINIITgrDKPGADITASVGSKGYQ---SYDGSFQQV--------LDKTKITMAGNYTYTrgfDIDAQ 201
Cdd:PRK13524 156 AAARYGNGAAGGVVNIIT--KKPTGEWHGSWNTYFNApehKAEGATKRTnfslsgplGDELSFRLYGNLNKT---QADAW 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 202 D--APRQPDRDGFMSKSLYGSIEQQINDSLSGFVR-GFGYDNRTAYD-GYDSYDNNF-----NFTGTPDTRQLYSQ---- 268
Cdd:PRK13524 231 DinQGHQSARTGSYAGTLPAGREGVINKDINGLLRwDFAPLQSLELEaGYSRQGNLYagdtqNTNSDALVKSLYGKetnr 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 269 ------------NWDTGLR---YKQ--GIYQTQLVAGYGRSKDQNYDPSKGRYaASSTMDDVkQYTTQWMNTFTVG-HGN 330
Cdd:PRK13524 311 myrqnyalthrgGWDNGVStsnYAQyeHTRNSRLPEGLAGGTEGIFNEKATQF-STIDLDDV-MLHSEVNLPFDLLvNQT 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 331 IGAGVDWQKQ---------QTQAGTGLLDqGF---------KQHNTGVFL-SAMQQFDSVTLEAAARHDDNSNFGNHstW 391
Cdd:PRK13524 389 LTLGTEWNQQrmkdpssntQALTSGGAIP-GVsatgrspysKAEIFSLFAeDNMELTDSTMLTPGLRFDHHSIVGNN--W 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 392 QTS--AAWEFVDGYRIIGSYGTAYKAPTMSQIHSaDY--------------------GNPDLKPEESEQWEGGFE----G 445
Cdd:PRK13524 466 SPSlnLSQGLGDDFTLKMGIARAYKAPNLYQTNP-NYilyskgqgcyasagngcylqGNDDLKAETSVNKEIGLEfkrdG 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 446 LTGPVTWrisaYRNDVDNLIGFGN---------RNRPY---NVDKARIEGVEATAQFdtgPVGHQISYD-----YVDPRN 508
Cdd:PRK13524 545 WLAGLTW----FRNDYRNKIEAGYvpvgtnsvgKTDIYqweNVPKAVVEGLEGTLNV---PVSETVNWTnnltyMLQSKN 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 509 ATTNQVLARRSKQQVKYQLDTQVWDfDWNL--AYRYLG----TRYDVAVDPNTfTTERVQMGGVSLWDLAVSYPVTSHLT 582
Cdd:PRK13524 618 KTTGDPLSIIPEYTLNSTLSWQATE-DLSLqsTFTWYGkqkpKKYNYKGQPVT-GSATKEVSPYSIVGLSATYDVTKNVS 695
|
730 740 750
....*....|....*....|....*....|....
gi 974590318 583 VRGKIANLFDKDYETVYGYETAGREYTLSGSYTF 616
Cdd:PRK13524 696 LTGGVDNLFDKRLWREGNAQTTGDLIAGAGAYTY 729
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
5-616 |
1.05e-37 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 149.14 E-value: 1.05e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 5 VSLMTALSVTAFSGWAQDSADSLVV--TANRF--EQPAntvlapTSVVTREDIE-RWQAKSVVEVMQRLPGVDI---AQS 76
Cdd:PRK13528 15 LLVGLNSPVSAAESSDDDNGETMVVeaTAEQElkQQPG------VSIITAEDIKkRPPVNDLSDIIRKMPGVNLtgnSAS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 77 GGMGANASTFIRGTESRHVLVLIDGIPLN--NA------GISNV-ADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVIN 147
Cdd:PRK13528 89 GTRGNNRQIDIRGMGPENTLILIDGVPVTsrNSvryswrGERDTrGDTNWVPPEMVERIEVIRGPAAARYGSGAAGGVVN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 148 IITGRdkPGADITASVGSKGYQ---SYDGSFQQV-------LDKTKITMA--GNYTYTRG--FDID-AQDAPRQPDRDGF 212
Cdd:PRK13528 169 IITKR--PTNDWHGSLSLYTNQpesSKEGATRRAnfslsgpLAGDALTMRlyGNLNKTDAdsWDINsSAGTKNAAGREGV 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 213 MSKSLYGSIE-----QQINDSLSGFVR-GFGYDNRTAYDGYDSYDNNFNFTGTpDTRQLYSQNWdtGLRYKqGIY---QT 283
Cdd:PRK13528 247 RNKDINGVLSwkmtpQQILDFEAGYSRqGNIYAGDTQNSNSSAVTESLAKSGK-ETNRLYRQNY--GLTHN-GIWdwgQS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 284 QLVAGYgrSKDQNYDPSKGRYAASSTM--DDVKQYTTQWMNTFTVGHGNI----------GAGVDWQK---------QQT 342
Cdd:PRK13528 323 RLGFYY--EKTNNTRMNEGLAGGGEGRitADQTFTTSRLESYRTSGELNVplnwlfeqtlTVGAEWNRdelndpsstSLT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 343 QAGTGL---------LDQGFKQHNTGVFLSA-MQQFDSVTLEAAARHDDNSNFGNHSTWQTSAAWEFVDGYRIIGSYGTA 412
Cdd:PRK13528 401 VKDGDIggisgsaadRSSKNKSEISALYVEDnIEPVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARA 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 413 YKAPTMSQiHSADY---------------------GNPDLKPEESEQWEGGFE----GLTGPVTWRISAYRNDV---DNL 464
Cdd:PRK13528 481 FKAPNLYQ-SSEGYllysrgngcpkditsggcylvGNKNLDPEISVNKEIGLEftvdDYHASVTYFRNDYQNKIvagDDV 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 465 IGF-GNRNRPY---NVDKARIEGVEATAQFdtgPV-GHQISYD-----YVDPRNATTNQVLARRSKQQVKYQLD---TQV 531
Cdd:PRK13528 560 IGRtASGAYILqwqNGGKAVVEGLEGNLLV---PLmKDRLNWNtnatyMITSEQKDTGNPLSVIPKYTINSTLDwqiTQA 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 532 WDFDWNLAY--RYLGTRYDVAVDPNTFTTERVQMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKD-YETVYG---YETAG 605
Cdd:PRK13528 637 LSANVNWTLygKQKPRTHAESRSEETGGLSGKELGAYSLVGVNVNYDINKNLRLNVGVSNLFDKQiYREGEGantYNEPG 716
|
730
....*....|.
gi 974590318 606 REYTLSGSYTF 616
Cdd:PRK13528 717 RAYYAGVTASF 727
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
45-616 |
1.62e-36 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 144.86 E-value: 1.62e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 45 TSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGANASTFIRGtesRHVLVLIDGIPLNnaGISNVA--DLSQIPTSL 122
Cdd:TIGR01783 6 VSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRG---FGLEVDIDNVYLD--GVPLLSrgNLAIVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 123 IQRIEYIRGPRSALYGSDAIGGVINIITGR--DKPGADITASVGSKGYQSYDGSFQ-QVLDKTKITMAGNYTYTRG--FD 197
Cdd:TIGR01783 81 VERVEVLRGPASLLYGGSAPGGVINIVTKRpqDEPKGSVTFGAGTRSGYRTAFDLGgPLGADGTFRGRLNGARQDGdsFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 198 IDAQDAPR----------------------QPDRDGFMSKSLYGSIEQQINDSLSGFVRGFG----YDNRTAYDGYDSYD 251
Cdd:TIGR01783 161 DGAGEETRlgatatdwqlddrtllrlgayyQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSsnrnYDDREYLSYGLSLE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 252 NNFNFTGTpDTRQLYSQNWDTGLRYKQ--GIYQTQLVAGYGRSkdqNYDPSKGRYAASSTMD-----------------D 312
Cdd:TIGR01783 241 YQFNDVWT-GKQNLRYSYFDTDSNQVQasGYSSDGGLFGRSLT---VVNVKQDRVQIDAGLDgefetgpiehdlllgvsY 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 313 VKQYTTQWMNTFTVGHgNIGAGVDWQKQQTQAG----TGLLDQGFKQHNtGVFLSAMQQFDSVTLEAAARHD----DNSN 384
Cdd:TIGR01783 317 GQRTTNRFNNTGYPSD-NIYSLTATSSARTDIGdspkDRALSSTTKALN-GVALQRILLADKWTLTLGGRYDsvdvKSNN 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 385 FGNHST---------WQTSAAWEFVDGYRIIGSYGTAYKAPTMSQIhSADYGNPDLKPEESEQWEGGFEG-LTGPVTWRI 454
Cdd:TIGR01783 395 GVAGSTgkrddsqftPSLGVAYKPTDDWSLYASYAESFKPGGYYPK-GAGNSGDILEPEKGKNYELGVRYdLGDSLLATA 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 455 SAYRNDVDNLIGFGNRNRPY--NVDKARIEGVEATAQFDTGP-VGHQISYDYVDPRNATTNQV------LARRSKQQVKY 525
Cdd:TIGR01783 474 ALFRITKDNQLVQDPVNGTFsvNAGKTRNRGVELEARGYLTPgLSLSAGYTYTDAEFTEDTNGdtqgntVPFVPKHTASL 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 526 QLDTQVWDFDWNLAY----RYLGTRYDVAvdpntftTERVQMGGVSLWDLAVSYPVTS--HLTVRGKIANLFDKDYETVY 599
Cdd:TIGR01783 554 WASYAPPVGDNGLTLgggvQYTGKAYVDG-------GNTGKVPSYTVVDLSVRYDLTKkkNLTLALNVNNLFDRDYYTSG 626
|
650 660
....*....|....*....|....*
gi 974590318 600 GYET--------AGREYTLSGSYTF 616
Cdd:TIGR01783 627 YRWGpsayiypgAPRTVGLSVSYDF 651
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
5-598 |
1.04e-30 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 127.82 E-value: 1.04e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 5 VSLMTALSVTAFSGWAQDSADSLVVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIaqSGGMGANAS 84
Cdd:PRK13484 11 IAVMCSAVISSGYASSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISI--TGGNEKPDI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 85 TfIRGTESRHVLVLIDGIPLNNA-----GISNVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITgrdKPGADI 159
Cdd:PRK13484 89 S-IRGLSGDYTLILVDGRRQSGResrpnGSGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIIT---KPVNNQ 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 160 T--ASVGSKGYQSYDGSFQQ------------VLDKTKITMAGNyTYTRGFDIDAQDAPRQpDRDGFMSKSLYGSIEQQI 225
Cdd:PRK13484 165 TwdGVLGLGGIIQEHGKFGNsttndfylsgplIKDKLGLQLYGG-MNYRKEDSISQGTPAK-DNKNITATLQFTPTESQK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 226 ndslsgFVRGFGYDN--RTAYDG--YDSYDNNFNFTG------TPDTRQLYSQNWDTG---LRYKQGIYQTQLV-----A 287
Cdd:PRK13484 243 ------FVFEYGKNNqvHTLTPGesLDAWTMRGNLKQpnskreTHNSRSHWVAAWNAQgeiLHPEIAVYQEKVIrevksG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 288 GYGRSKDQNYDPSKGRYAASSTMDDVKQYTTQWMNTFTVG----HGNIGAGVDWQKQQTQAGTGLLDQgfkqhnTGVFL- 362
Cdd:PRK13484 317 KKDKYNHWDLNYESRKPEITNTIIDAKVTAFLPENVLTIGgqfqHAELRDDSATGKKTTETQSVSIKQ------KAVFIe 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 363 SAMQQFDSVTLEAAARHDDNSNFGNHSTWQTSAAWEFVDGYRIIGSYGTAYKAPTMSQI-----------HSADYGNPDL 431
Cdd:PRK13484 391 NEYAATDSLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVspgfgtltqggASIMYGNRDL 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 432 KPEESEQWEGGF-----EGLTGPVTWRISAYRNDVDNL-IG-----FGNRNRPY-NVDKARIEGVEATAQFDTGPVGH-Q 498
Cdd:PRK13484 471 KPETSVTEEIGIiysndSGFSASATLFNTDFKNKLTSYdIGtkdpvTGLNTFIYdNVGEANIRGVELATQIPVYDKWHvS 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 499 ISYDYVDPRNATTNQVLARRS------KQQVKYQLDTQV-WDFDWNLAYrYLGTRYD----VAVDPNTFTTERVQMGGVS 567
Cdd:PRK13484 551 ANYTFTDSRRKSDDESLNGKSlkgeplERTPRHAANAKLeWDYTQDITF-YSSLNYTgkqiWAAQRNGAKVPRVRNGFTS 629
|
650 660 670
....*....|....*....|....*....|.
gi 974590318 568 LwDLAVSYPVTSHLTVRGKIANLFDKDYETV 598
Cdd:PRK13484 630 M-DIGLNYQILPDTLINFAVLNVTDRKSEDI 659
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
37-145 |
3.10e-30 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 114.29 E-value: 3.10e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 37 PANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGmGANASTFIRGTESRHVLVLIDGIPLNNAGISNVaDLS 116
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGG-GGGSSISIRGFGSNRVLVLVDGVPLNSGGGGSV-DLN 78
|
90 100
....*....|....*....|....*....
gi 974590318 117 QIPTSLIQRIEYIRGPRSALYGSDAIGGV 145
Cdd:pfam07715 79 SIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
45-279 |
2.81e-12 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 69.67 E-value: 2.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 45 TSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGANAStfIRGTESRHVLVLIDGIPLNNAGISN-VADLSQIPTSLI 123
Cdd:TIGR01782 27 VDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVS--VRGLGPSYNRTTLNGRTIASTDSGGrAFSLDLLPSELV 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 124 QRIEYIRGPRSALYGsDAIGGVINIITGR--DKPGADITASVGskgyqsydGSFQQVLDKTKITMAGNYTYTRGFdidaq 201
Cdd:TIGR01782 105 SGVEVYKTPTADMDE-GGIGGTVDLRTRSpfDYDGRTLSGSAQ--------GGYNDLAGKDKPGPRGAASYSWTF----- 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 974590318 202 daprqpDRDGFmskslygsieqqindslsGFVRGFGYDNRTAYDGYDSYDNNFNFTGTPDTRQLYSQNWDTGLRYKQG 279
Cdd:TIGR01782 171 ------GDGQF------------------GVLLSASYQKRDFAEDNVETENWGTYTSADGGAQGLYFPRGVRYRSYRN 224
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
45-258 |
2.92e-10 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 63.38 E-value: 2.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 45 TSVVTREDIERWQAKSVVEVMQ-RLPGVDIAQ-SGGMGANASTFIRG----TESRHVLVLIDGIPLNNagisnvaDLSQI 118
Cdd:TIGR04056 98 VSTVKAKELKKVPVSNLSNALQgKVAGVIITQsSGEPGGDAEIWIRGissfGGNNSPLYVIDGVPRDN-------GLSDL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 119 PTSLIQRIEYIRGPRS-ALYGSDAIGGVINIITgrdKPGADITASVgskgyqSYDGSFQ-QVLDKtKITMAGNYTYtrgf 196
Cdd:TIGR04056 171 NPEDIESISVLKDASAtAIYGSRGANGVILITT---KRGKEGKPKI------SYNAEFGfSTPTR-LPEMLNAYEY---- 236
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 197 dIDAQDAPRQPDRDGfmSKSLYGSIEQQINDSLSGfvrGFGYDNrtaYDGYD--------SYDNNFNFTG 258
Cdd:TIGR04056 237 -AELYNEALLNRGSS--PPDIYTDEEIEAYRNGLD---PDLYPN---TDWQDeifkrtafNQRHNLSVSG 297
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
2-595 |
6.40e-09 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 59.00 E-value: 6.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 2 IKKVSLMTALSVTAFSGWAQDSA----DSLVVTANRFEQ-----PANTVLA------------------PTSVVTREDIE 54
Cdd:PRK10044 13 LRKIAVVVATAVSGMSVYAQAAVepkeETITVTAAPAPQesawgPAATIAAkrsatgtktdtpiektpqSISVVTAEEMA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 55 RWQAKSVVEVMQRLPGVDIAQSGGMGANASTFIRGTESRHVLV--LIDGIPLNNAGISNVadlsQIPTSLIQRIEYIRGP 132
Cdd:PRK10044 93 LHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQSQnnYLDGLKLQGNFYNDA----VIDPYMLERAELMRGP 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 133 RSALYGSDAIGGVINIITGRDKP------------------GADITASVGSKGYQSY-------DGSFQQVLDKTK-ITM 186
Cdd:PRK10044 169 VSVLYGKSNPGGLLNMVSKRPTTeplkevqfkmgtdnlfqtGFDFSDALDDDGVYSYrltglarSANAQQKGSEEQrYAI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 187 A----------GNYTYTRGFdidaQDAPrQPDRDGFMSKSlyGSIEQQIN-DSLS-GFVRGFG---YDNRTAYDGYdSYD 251
Cdd:PRK10044 249 ApsftwrpddkTNFTFLSYF----QNEP-ETGYYGWLPKE--GTVEPLPNgKRLPtDFNEGAKnntYSRNEKMVGY-SFD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 252 NNFNFTGTpdTRQlysqnwdtGLRYKQGIYQTQLVAGYGRSKDQNYDPSKGrYAASStmDDVKQYT--TQWMNTFTVG-- 327
Cdd:PRK10044 321 HEFNDTFT--VRQ--------NLRYAENKTSQRSVYGYGVCSDKGHYLNRG-YVVDD--EKLQNFSvdTQLQSKFATGdv 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 328 -HgNIGAGVDWQKQQ----TQAGTG----LLDQ--------GF-----------KQHNTGVFLSAMQQFDSVTLEAAARH 379
Cdd:PRK10044 388 dH-TLLTGVDFMRMRndinAWFGYAdsvpLLNLygpvntdfDFnansgpyqilnKQKQTGLYVQDQAEWDKWLVTLGGRY 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 380 D------DNSNFGNHS-------TWQTSAAWEFVDGYRIIGSYGTAYKaPTmSQihsADYGNPDLKPEESEQWEGGFEGL 446
Cdd:PRK10044 467 DwadqssLNRVNGTTDkrddkqfTWRGGVNYLFDNGITPYFSYSESFE-PS-SG---TGKDGNIFAPSKGKQYEAGVKYV 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 447 TG--PVTWRISAYRNDVDNLIGFGNRNRPYNVDKARI--EGVEATAQFD-TGPVGHQISYDYVDPRNATTNQVLARRSKQ 521
Cdd:PRK10044 542 PKdrPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIraRGVELEAKAAlSANVNVTGSYTYTDAEYTTDTTYKGNTPAQ 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 522 QVKYQldTQVW-DFDWN----------LAYRYLGTRY-DVAvdpNTFttervQMGGVSLWDLAVSYPVT------SHLTV 583
Cdd:PRK10044 622 VPKHM--ASLWaDYTFFdgplsgltlgTGGRYTGSSYgDPA---NSF-----KVGSYTVVDALVKYDLArfgmagSSVAL 691
|
730
....*....|..
gi 974590318 584 rgKIANLFDKDY 595
Cdd:PRK10044 692 --NVNNLFDREY 701
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
30-610 |
6.49e-09 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 59.04 E-value: 6.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 30 TANRFEQPANTVLAPTSVVTREDIE-RWQAKSVVEVMQRLPGVDIAQSGGMGANASTFIRGTESRHVLVLIDGIPLNNAG 108
Cdd:PRK14050 68 TGSKTDTPITEIPQSVSVVGRQEMDdRGVTNKVDEALRYTPGVLSQPFGTDGDTDWFYIRGFDATQTGVFLDGLNLFSYG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 109 ISNVadlsQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITGR--------------------------DKPGADITAS 162
Cdd:PRK14050 148 FGGF----QIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRpldeplyyteiginsygnaftgfdvgDKLSDDGTVR 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 163 -------VGSKGYQSYDGSFQQVL---------DKTKITMAGNYTY------TRGFDI---DAQDAP-RQPDRDGFMSK- 215
Cdd:PRK14050 224 yrvtgkvAGGDNYSDYSEDLRGFImpqityapdDATSLTVYGYLSGldqvhvGNGFLPyvgTVVDAPfGKIDRDAFYGEp 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 216 -SLYGSIEQQIndslsgfvrgfgydnrTAYDGYDSYDNNFNFtgtpdtrqlySQNWDTGLRYKQGIYqtQLVAGYGRSKD 294
Cdd:PRK14050 304 dIDNGSYAQQM----------------LGYEFSHEFDNGWTF----------SQNARYGHLHKHEKG--PYTYGYVGGAT 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 295 QNYDPSKGRY-------AASSTMDDVkQYTTQWMNTFTVG---HgNIGAGVDW---QKQQTQAGTG-------------- 347
Cdd:PRK14050 356 GLPDPTGPDYmlnrigfEHRSKVDSF-SIDNRLEGEFDTGaltH-NLLFGLDYkyyRLDQVQACCGatpisatnpvygtt 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 348 ------LLDQGFKQHNTGVFLSAMQQF------------DSVTLEAAARHDDN--SNFGNHSTwQTSAAWEFVDGYRIIG 407
Cdd:PRK14050 434 qganfvYLDQILTQQQIGIYAQDQIRFgdgwlvtlngryDYVDTDSDARIGTSyeSNDGALSG-RAGLAYEFDNGLTPYV 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 408 SYGTAYKaptmSQIHSADYGNPdLKPEESEQWEGG-------FEGLTGPVTWRISAYRNDVDNLIGFGNRnrpyNVDKAR 480
Cdd:PRK14050 513 SAATFFN----PLVGTLASGPP-LKPEEGEQYEAGikyepsfIDGLITASVFQITKKNVTVTDPLTFAST----QLGEVR 583
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 481 IEGVEATAQFDTGPVGHQI-SYDYVDPR-NATTNQVLARRS-----KQQVKYQLDTQVWD--FD---WNLAYRYLGTRY- 547
Cdd:PRK14050 584 SRGFELEGKVNLDDNWKALaSFTYTDLEiTEDANPSLIGNSpylvpETQASLWLDYAVTDgaFEgvsLGAGVRYQGESWa 663
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 974590318 548 DVAvdpntfTTERVQmgGVSLWDLAVSYPvTSHLTVRGKIANLFDKDY------ETVYGYeTAGREYTL 610
Cdd:PRK14050 664 DEA------NTLKVP--AATLFDAAIRYE-KNDWGASLNVANLFDKEYvagcqgLLVCGY-GESRTITL 722
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
556-616 |
2.08e-05 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 47.55 E-value: 2.08e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 974590318 556 FTTERVQMGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYET------VYGyetAGREYTLSGSYTF 616
Cdd:PRK10003 666 YGTFRAEQGSYALVDLFTRYQVTKNFSVQGNVNNLFDKTYDTnvegsiVYG---APRNFSITATYQF 729
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
6-593 |
1.28e-04 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 45.28 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 6 SLMTALSVTAFSGWAQDsADSLVVTANRFEQPANTVLAPT----SVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGA 81
Cdd:PRK14049 41 TALETLVVNGGSGGVIT-ADGYVATSSATGAKVDTPFLETpqsiSSVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPR 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 82 NASTFIRGTESRHVLVLIDGIPLNNAgisnVADLSQIPTSLIQRIEYIRGPRSALYGSDAIGGVINIITGRDKPGADITA 161
Cdd:PRK14049 120 FDAFFVRGFDVTYTGVFRDNLRQPGA----SSSIFKTEPYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREV 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 162 SVGSKGYQSYDGSFqqvlDKTKITMAGNYTYTR----GFDIDAQD----------APR---QPDRD------GFMSKSLY 218
Cdd:PRK14049 196 QVQYGTNNRYQGQF----DFSGPVNETDPVYYRltglLRDADTEQvgvpddrayiAPAftwKPDEDtrltvlGEYSRTKT 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 219 GSIEQQINDSLSG-----FVRGFGYDNRTAYDGYDSYDNNFNFTGTPDTRQ-LYSQNWDTGLRYkQGIYQTQLVagygrs 292
Cdd:PRK14049 272 GGTAAYYNDPLTGevtdiFAGNPAFNDSVQKQGRIGYEFEHRLNDTFVFRQnARVSTLNIDADW-AFAYAPNAA------ 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 293 kdqnyDPSKGRYAASSTMDDVKQYTTQWMNTFTVGHGNIG----AGVDWQKQQTQA--GTGL-----------------L 349
Cdd:PRK14049 345 -----DPTLLDSSAGTYDERLTAFVIDNQLEAKFDTGAFEhtllAGVDYTKLRFRAlnGRGVsppldtknptqgrpvaaI 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 350 DQGFK----QHNTGVFLSAMQQFDSVTLEAAARHD------DNSNFGNHS-----------TWQTSAAWEFVDGYRIIGS 408
Cdd:PRK14049 420 DFSTRtvqdQWQLGTYLQDQIRYDAWTLTAGGRYDwvstdtDTTDLATDSlttvsqkdkefSGRIGLTYETDFGLAPYIS 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 409 YGTAYkAPTMSqiHSADYGNPdLKPEESEQWEGGFEGLTGPVTWRISAYRNDVDNLIGF---------GNRNRPYNVDKA 479
Cdd:PRK14049 500 YSTAF-SPNAG--FNRATNQP-FKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLyyevvflaaGPTNIQVQRGKL 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 480 RIEG--VEATAQFDTGpVGHQISYDYVD------PRNATTNQVLA---RRSKQQVKYQL--DTQVWDFDWNLAYRYLGTR 546
Cdd:PRK14049 576 RSRGfeLEANTSLDNG-LSLIASYTYTDvkiiqgPEGTIGNEVSSvpnHMASAWAHYTLpeGGPLYGLGLGAGARFVGSS 654
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 974590318 547 YdvAVDPNTF-TTERVQMGGVSLWDLAVSYPVTSHLTVRGKIANLFDK 593
Cdd:PRK14049 655 Y--GNDQNTFkNSSRVLFDASVGYDFAAIDKKYEGLMLQVNATNLFDR 700
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
23-182 |
1.37e-04 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 45.18 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 23 SADSlvVTANRFEQPANTVLAPTSVVTREDIERWQAKSVVEVMQRLPGVDIAQSGGMGaNAST----FIRGTESRHVlVL 98
Cdd:PRK09840 55 APDQ--SADPKFSQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGVGTFFAGENG-NTTTgdaiYMRGFDTSNS-IY 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974590318 99 IDGiplnnagisnVADLSQIPTSL--IQRIEYIRGPRSALYGSDAIGGVINIIT--GRDKPGADITASVGSKGYQSYDGS 174
Cdd:PRK09840 131 VDG----------IRDIGSISRDTfnTEQVEVIKGPSGTDYGRSAPTGSINMISkqPRNDSGIDASASIGSAWFRRGTLD 200
|
....*...
gi 974590318 175 FQQVLDKT 182
Cdd:PRK09840 201 VNQVIGDT 208
|
|
| |
