|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-338 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 753.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 1 LIMSSSLILVITILMLPLLTTLNPKPRNPEWARTHVKTAVSTSFFISLLPLMIFLDQGMESITTNN--MNTHMFDTNISF 78
Cdd:MTH00137 5 LIMTSSLILIFALLIYPLLTTLSPNPQKPNWALTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWnwMNTLTFDINISF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 79 KFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YG 156
Cdd:MTH00137 85 KFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGwwYG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 157 RADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNFDMTIPLVGLILAATGKSAQFGLHPWLPSAMEG 236
Cdd:MTH00137 165 RADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 237 PTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
Cdd:MTH00137 245 PTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 324
|
330 340
....*....|....*....|..
gi 973693172 317 NQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00137 325 NQPQLAFLHICTHAFFKAMLFL 346
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-338 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 582.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 1 LIMSSSLILVITILMLPLLTTLNPKprNPEWARTHVKTAVSTSFFISLLPLMIFLDQGMESITTNN--MNTHMFDTNISF 78
Cdd:MTH00004 3 LLLNTTTLLTLLILLTPILLPLLSK--NLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWpwIFTTTFNIPISF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 79 KFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YG 156
Cdd:MTH00004 81 KLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGwwSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 157 RADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNFdmTIPLVGLILAATGKSAQFGLHPWLPSAMEG 236
Cdd:MTH00004 161 RAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQTP--TLPLLGLILAATGKSAQFGLHPWLPAAMEG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 237 PTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
Cdd:MTH00004 239 PTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGL 318
|
330 340
....*....|....*....|..
gi 973693172 317 NQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00004 319 NQPQLAFLHISTHAFFKAMLFL 340
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-338 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 580.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 1 LIMSSSLILVITILMLPLLTTLNPkprnpeWARTHVKTAVSTSFFISLLPLMIFLDQGMESITTNN--MNTHMFDTNISF 78
Cdd:MTH00066 5 LIFNSSMILSLLLLILPLLLPKSN------NFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFhwMNIFNFNINSSF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 79 KFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YG 156
Cdd:MTH00066 79 KFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGwwHA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 157 RADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNfdMTIPLVGLILAATGKSAQFGLHPWLPSAMEG 236
Cdd:MTH00066 159 RADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN--STLPLLGLILAAAGKSAQFGLHPWLPAAMEG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 237 PTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
Cdd:MTH00066 237 PTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
|
330 340
....*....|....*....|..
gi 973693172 317 NQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00066 317 NQPQLAFFHICTHAFFKAMLFL 338
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
2-338 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 574.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 2 IMSSSLILVITILMLPLLTTLNPKPRNPEWArTHVKTAVSTSFFISLLPLMIFLDQGMESITTNN--MNTHMFDTNISFK 79
Cdd:MTH00108 3 LFTSSTLLTLLILTLPIIMTLTNPYKTNNYP-LYVKTTISYAFIISLIPTMMFIHSGQEMIISNWhwMTIQTLKLSLSFK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 80 FDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YGR 157
Cdd:MTH00108 82 LDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGwwYGR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 158 ADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNfDMTIPLVGLILAATGKSAQFGLHPWLPSAMEGP 237
Cdd:MTH00108 162 TDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPN-NSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 238 TPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 317
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
|
330 340
....*....|....*....|.
gi 973693172 318 QPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFM 341
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-338 |
1.88e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 476.75 E-value: 1.88e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 1 LIMSSSLILVITILMLPLLTTLNpkprnpeWARTHVKTAVSTSFFISLLPLMIFLDQGMESITTNN--MNTHMFDTNISF 78
Cdd:MTH00211 3 TIFNSGFLLILILLLLPLLLPLN-------NSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWswINLGLFSLNLSF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 79 KFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YG 156
Cdd:MTH00211 76 KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISwwYG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 157 RADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNfdMTIPLVGLILAATGKSAQFGLHPWLPSAMEG 236
Cdd:MTH00211 156 RSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLD--LTLFLLGLLLAAMGKSAQFGFHPWLPSAMEG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 237 PTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
Cdd:MTH00211 234 PTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGL 313
|
330 340
....*....|....*....|..
gi 973693172 317 NQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00211 314 NQPQLAFLHICTHAFFKAMLFM 335
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-338 |
4.86e-131 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 387.40 E-value: 4.86e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 42 TSFFISLLPLMIFLDQGMESIT---TNNMNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKY 118
Cdd:MTH00208 64 TLAFLSLINLLIWILLGCPNINislSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 119 LLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYG--RADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQ 196
Cdd:MTH00208 144 LIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWttRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 197 IFFLSKNFDMTIP--LVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTIC 274
Cdd:MTH00208 224 ILSLNNSNSFLINilLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLC 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 973693172 275 LCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00208 304 LILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFL 367
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
3-338 |
4.87e-100 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 307.08 E-value: 4.87e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 3 MSSSLILVITILMLPLLTTLNPKPRNPEWARTHVKTAVSTSFFISLLPLMIFLDQGMESITTNNMNTHMFDTNISFKFDH 82
Cdd:COG1009 1 LQLLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 83 YSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YGRADA 160
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGfwYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 161 NTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNFD----MTIPLVGLILAATGKSAQFGLHPWLPSAMEG 236
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILssplLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 237 PTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340
....*....|....*....|..
gi 973693172 317 NQPQLAFLHICTHAFFKAMLFL 338
Cdd:COG1009 321 GAYVAALFHLLTHAFFKALLFL 342
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
39-338 |
4.74e-92 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 287.05 E-value: 4.74e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 39 AVSTSFFISLLPLMIFLDQGMESITTNN---MNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRF 115
Cdd:PRK06590 38 LVGLSALLSLVVFFDFLLGGGRAFSQTLwtwISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 116 FKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWE 193
Cdd:PRK06590 118 FAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGfwYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLN 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 194 IQQIFFLSKNF----DMTIPLVGLIL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENN 267
Cdd:PRK06590 198 YDEVFAAAPQFfglgWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELS 277
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 973693172 268 NMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:PRK06590 278 PEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFL 348
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
39-338 |
4.91e-84 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 265.68 E-value: 4.91e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 39 AVSTSFFISLLPLMIFLDQGMESITTNN----MNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNR 114
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQSlfpwISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 115 FFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSW 192
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGfwYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 193 EIQQIFFLSKNFD---MTIPLVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNM 269
Cdd:TIGR01974 196 NFQEVFALAPGAFfsaLTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPT 275
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 973693172 270 ALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFL 344
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
67-338 |
4.03e-77 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 247.68 E-value: 4.03e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 67 MNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVG 146
Cdd:MTH00020 65 LDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 147 IMSFLLIG--YGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIF---FLSKNFDMTIPLVGLILAATGKS 221
Cdd:MTH00020 145 LCSYLLINfwLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFnmvVSAPSSDITLICLFLFIGAVGKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 222 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAF 301
Cdd:MTH00020 225 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAY 304
|
250 260 270
....*....|....*....|....*....|....*..
gi 973693172 302 STSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00020 305 STCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFL 341
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
68-338 |
1.38e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 246.46 E-value: 1.38e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 68 NTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGI 147
Cdd:MTH00210 66 DSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 148 MSFLLIGY--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFL----SKNFDMTIPLVGLILAATGKS 221
Cdd:MTH00210 146 CSYLLINFwlTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLlvtnINKESLTIICLLLFIGAVGKS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 222 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAF 301
Cdd:MTH00210 226 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAY 305
|
250 260 270
....*....|....*....|....*....|....*..
gi 973693172 302 STSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00210 306 STCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFL 342
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
43-338 |
5.54e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 214.71 E-value: 5.54e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 43 SFFISLLPLMIFLDQGMES--ITTNNMNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLL 120
Cdd:MTH00151 13 SYSVFLFPLLGYFGLNGISliFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 121 LFLVAMITLVTANNMFQLFIGWEGVGIMSFLL-IGYGRADANTAALQAVIYNRVGDIGLILSMAWFaMNLNSWeiqQIFF 199
Cdd:MTH00151 93 LFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALvIYYQNKKSLSAGMLTALTNRIGDVLILLSIALL-VLLGHW---SILS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 200 LSKNFDMTIPLVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGA 279
Cdd:MTH00151 169 MWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISL 248
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 973693172 280 LTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00151 249 LTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
67-338 |
2.63e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 210.38 E-value: 2.63e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 67 MNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVG 146
Cdd:MTH00165 39 FSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 147 IMSFLL-IGYGRADANTAALQAVIYNRVGDIGLILSMAWFaMNLNSWE-IQQIFFLSKNFDMTIPLVGLILAATGKSAQF 224
Cdd:MTH00165 119 LVSYCLvIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWM-MNFGSWNfIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 225 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMaLTICLCLGALTTLFTATCALTQNDIKKIVAFSTS 304
Cdd:MTH00165 198 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF-SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTL 276
|
250 260 270
....*....|....*....|....*....|....
gi 973693172 305 SQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00165 277 SQLGLMMSILSLGFPKLAFFHLLTHALFKALLFL 310
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
67-338 |
1.36e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 210.59 E-value: 1.36e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 67 MNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVG 146
Cdd:MTH00032 65 IESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 147 IMSFLLIGY--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQI---FFLSKNFDMTIPLVG--------- 212
Cdd:MTH00032 145 VCSYLLVAFwtTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGayesplapf 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 213 ------LILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTA 286
Cdd:MTH00032 225 aiigilLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAA 304
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 973693172 287 TCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQ-LAFLHICTHAFFKAMLFL 338
Cdd:MTH00032 305 TVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFL 357
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
105-338 |
3.13e-62 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 209.88 E-value: 3.13e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 105 YMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YGRADANTAALQAVIYNRVGDIGLILSM 182
Cdd:PRK07376 114 YMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGfwYDRKGAADAAQKAFVVNRVGDFGLLLGI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 183 AWFAMNLNSWEIQQI---FFLSKNFDMTIPLVGLILA------ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 253
Cdd:PRK07376 194 LGLFWATGSFDFDGIadrLSELVSSGAVSGWLALLLCilvflgPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 254 IFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFK 333
Cdd:PRK07376 274 VFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFK 353
|
....*
gi 973693172 334 AMLFL 338
Cdd:PRK07376 354 AMLFL 358
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
80-338 |
3.23e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 199.49 E-value: 3.23e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 80 FDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLL-IGYGRA 158
Cdd:MTH00209 50 IDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLvIYYQNS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 159 DANTAALQAVIYNRVGDIGLILSMAWFaMNLNSWeiqQIFFLSKNFDMTIPLVGLI-LAATGKSAQFGLHPWLPSAMEGP 237
Cdd:MTH00209 130 KSLSAGMLTALTNRVGDALLILSIAWM-LMHGNW---NIFYLNFNSNLGSVISVLIvLAAMTKSAQIPFSAWLPAAMAAP 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 238 TPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 317
Cdd:MTH00209 206 TPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLN 285
|
250 260
....*....|....*....|.
gi 973693172 318 QPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00209 286 QPELAFFHLITHALFKALLFI 306
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
105-338 |
3.04e-57 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 197.42 E-value: 3.04e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 105 YMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG--YGRADANTAALQAVIYNRVGDIGL---I 179
Cdd:CHL00025 114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGfwFTRPIAANACQKAFVTNRVGDFGLllgI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 180 LSMAWFAmnlNSWEIQQIFFLSKN---------FDMTIPLVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 250
Cdd:CHL00025 194 LGFYWIT---GSFEFRDLFEIFNNliynnevnlLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 251 VAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 330
Cdd:CHL00025 271 AAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHA 350
|
....*...
gi 973693172 331 FFKAMLFL 338
Cdd:CHL00025 351 YSKALLFL 358
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
42-338 |
2.36e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 184.20 E-value: 2.36e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 42 TSFFISLLPLMIFLDQGMESITTNNMNTHMFDTNISFK--FDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYL 119
Cdd:MTH00207 15 WFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTiiLDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 120 LLFLVAMITLVTANNMFQLFIGWEGVGIMSFLL-IGYGRADANTAALQAVIYNRVGDIGLILSMAWfAMNLNSWEIQQIF 198
Cdd:MTH00207 95 LLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILvIYYQNPKSLGAGMITALTNRIGDVMLLLSIGW-TLNQGHWSITNMW 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 199 FlsKNFDMTIPLVgLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLG 278
Cdd:MTH00207 174 Q--TDMNNYIALS-IMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTA 250
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 279 ALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00207 251 SLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFV 310
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
72-338 |
1.41e-52 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 184.74 E-value: 1.41e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 72 FDTNISFKFDHYSLIFtpiALYVT---WSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIM 148
Cdd:PRK12647 54 LGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSIT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 149 SFLLIGY--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLS---KNFDMTIPLVGLILA-ATGKSA 222
Cdd:PRK12647 131 SFLLIGFnhEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGdviREHPLYLAILLLVLGgAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 223 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFS 302
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
250 260 270
....*....|....*....|....*....|....*....
gi 973693172 303 TSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:PRK12647 291 TVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFM 329
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
75-338 |
2.16e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 162.01 E-value: 2.16e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 75 NISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLI- 153
Cdd:MTH00095 38 SLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVl 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 154 GYGRADANTAALQAVIYNRVGDIGLIlsmawfaMNLNSWEIQQIFFLSKNFDMTIPLVGLILAATGKSAQFGLHPWLPSA 233
Cdd:MTH00095 118 FYNNWDSNSGAMNTALTNRIGDFFIF-------LFFSGFIFSSYYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 234 MEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMaLTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVT 313
Cdd:MTH00095 191 MSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNV-MKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLT 269
|
250 260
....*....|....*....|....*
gi 973693172 314 IGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00095 270 FGSGLSFVSFIHLLSHALFKSCLFM 294
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-337 |
6.68e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 164.21 E-value: 6.68e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 75 NISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG 154
Cdd:PRK12648 69 NLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 155 Y--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFF---LSKNFDMTIPLVGLIL-AATGKSAQFGLHP 228
Cdd:PRK12648 149 YwhHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAagdLIRAHPLYPPALVLILlGAFTKSAQFPFHF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 229 WLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLG 308
Cdd:PRK12648 229 WLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLG 308
|
250 260 270
....*....|....*....|....*....|..
gi 973693172 309 LMMVTIGLNQPQ---LAFLHICTHAFFKAMLF 337
Cdd:PRK12648 309 LITLLLGLGSPLaavAAIFHIINHATFKASLF 340
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-338 |
1.43e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 160.47 E-value: 1.43e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 75 NISFKFDHYSLIFTPIALYVTWSILEFALWYMHAD-PNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLI 153
Cdd:PRK12644 67 DLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 154 GYG--RADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFflskNFDMTIPLVG----LILA-ATGKSAQFGL 226
Cdd:PRK12644 147 GHYaeRAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL----ADPPTGPAVSvavvLILVgALSKSAIVPF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 227 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQ 306
Cdd:PRK12644 223 HFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQ 302
|
250 260 270
....*....|....*....|....*....|....*
gi 973693172 307 LGLMMVTIGLNQPQ--LAFLH-ICTHAFFKAMLFL 338
Cdd:PRK12644 303 LGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALFL 337
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
69-338 |
8.46e-43 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 157.90 E-value: 8.46e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 69 THMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIM 148
Cdd:PRK12650 66 GNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 149 SFLLIGYGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIF---FLSKNFDMTIPLVGLI-LAATGKSAQF 224
Cdd:PRK12650 146 SFFLIARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILhsdVWAEKPGLTTVVAVLIaVAAFTKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 225 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENN---NMALTIClclGALTTLFTATCALTQNDIKKIVAF 301
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwNWLLIIV---GMITALMGAVFAVQKTDLKKLTAY 302
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 973693172 302 STSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:PRK12650 303 STVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFM 342
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
73-338 |
1.98e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 153.76 E-value: 1.98e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 73 DTNISFKFDHYSLIFTPIALYVTWSILEFALWYM-HADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFL 151
Cdd:PRK12646 69 DINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 152 LIGY--GRADANTAALQAVIYNRVGD----IGLILSMAWFAMNLNSWEIQQIFFLSKNFDMTIPLVGLILAATGKSAQFG 225
Cdd:PRK12646 149 LISYwyNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 226 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSS 305
Cdd:PRK12646 229 FHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTIS 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 973693172 306 QLGLMMVTIGLN-----QPQLAF------------LHICTHAFFKAMLFL 338
Cdd:PRK12646 309 QLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFM 358
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
40-338 |
4.73e-40 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 150.00 E-value: 4.73e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 40 VSTSFFISLLPLMIFLDQGMESITTNNMNTHM--------FDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPN 111
Cdd:TIGR00940 25 IHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHytidwvpeLGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEP 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 112 MNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGY--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNL 189
Cdd:TIGR00940 105 LPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYwhHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKIT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 190 NSWEIQQIFFLS---KNFDMTIPLVGLIL-AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLME 265
Cdd:TIGR00940 185 GSFSIDAVIASAdaiRNSPLFGTAMVLVLlGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFA 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 266 NNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQL----------------AFLHICTH 329
Cdd:TIGR00940 265 GTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINH 344
|
....*....
gi 973693172 330 AFFKAMLFL 338
Cdd:TIGR00940 345 ATFKGSLFM 353
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
9-338 |
6.05e-39 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 142.59 E-value: 6.05e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 9 LVITILMLPLLT--TLNPKPRNPEWARTHVKTAVSTSFFISLLPLMIFLDQGMESITTNNMNTHMfdtNISFKFDHYSLI 86
Cdd:COG0651 4 LLILPVLLPLLAaaLLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPAPF---GIVLVADRLSAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 87 FTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYGRADANT-AAL 165
Cdd:COG0651 81 FLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALrAGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 166 QAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNFDMTIPLVGLILAATG---KSAQFGLHPWLPSAM-EGPTPVS 241
Cdd:COG0651 161 KYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVGfgiKAALFPLHFWLPDAYpAAPSPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 242 ALLhSSTMVVAGIFLLIRLHPLM---ENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQ 318
Cdd:COG0651 241 ALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGT 319
|
330 340
....*....|....*....|...
gi 973693172 319 PQL---AFLHICTHAFFKAMLFL 338
Cdd:COG0651 320 PLGlagALFHLLNHALAKALLFL 342
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
113-338 |
2.49e-37 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 139.34 E-value: 2.49e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 113 NRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG-YGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNS 191
Cdd:PRK06525 113 GRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISyYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 192 WEIQQIFFLSKNFDmTIPLVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLhpLMENNNMAL 271
Cdd:PRK06525 193 FALSALSGLHGSLK-YLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIPH 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 973693172 272 TI---CLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN--QPQLAF----LHICTHAFFKAMLFL 338
Cdd:PRK06525 270 VIgyvGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilGSRLALegsiAYIFNHAFAKSLFFL 345
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-338 |
2.92e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 138.81 E-value: 2.92e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 75 NISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG 154
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 155 Y--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLS------KNFDM-TIPLVGLILAATGKSAQFG 225
Cdd:PRK12649 153 YwrHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSelieniKGHPLfLITLILIFIGAAAKSAQGP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 226 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSS 305
Cdd:PRK12649 233 FYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTIS 312
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 973693172 306 QLGLMMVTIGL---NQPQLAF----LHICTHAFFKAMLFL 338
Cdd:PRK12649 313 QLAYLMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFL 352
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
96-338 |
5.34e-36 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 136.37 E-value: 5.34e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 96 WSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGI-MSFLLIGY-GRADANTAALQAVIYNRV 173
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLaLHRLLCFYpDRPFARLAAHKKFIADRL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 174 GDIGLILSMAWFAMNLNSWEIQQIFFLSKNFDMTIPL----VGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 249
Cdd:PRK08168 163 AELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLqaaaLLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 250 VVAGiFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTH 329
Cdd:PRK08168 243 NLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
|
....*....
gi 973693172 330 AFFKAMLFL 338
Cdd:PRK08168 322 SLYKAHAFL 330
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
132-338 |
1.91e-34 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 127.43 E-value: 1.91e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 132 ANNMFQLFIGWEGVGIMSFLLIGYGRADANT--AALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIF----FLSKNFD 205
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSseAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 206 MTIPLVGLILAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRLHPLMEN-NNMALTICLCLGALTTL 283
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 973693172 284 FTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFL 217
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
101-338 |
3.18e-34 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 132.34 E-value: 3.18e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 101 FALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYGRADA--NTAALQAVIYNRVGDIGL 178
Cdd:PRK07390 108 YALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPlvVTAARDAFLTKRVGDLLL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 179 ILSMAWFAMNLNSWEIQQIFFLSKNFDM---TIPLVGLILAA--TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAG 253
Cdd:PRK07390 188 LMGVVALSPLAGTLNFSDLAAWAATANLdplTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATG 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 254 IFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFK 333
Cdd:PRK07390 267 AWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAK 346
|
....*
gi 973693172 334 AMLFL 338
Cdd:PRK07390 347 ALLFM 351
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
72-338 |
7.69e-33 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 128.89 E-value: 7.69e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 72 FDTNISFKFDHYSLIFTPI-----ALYVTWSIlefalWYMHADP-NMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGV 145
Cdd:PRK12645 68 LGINFTLYVDGLSLLFALLitgigSLVVLYSI-----YYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELT 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 146 GIMSFLLIGY--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIF----FLSKNFDMTIPLVGLILAATG 219
Cdd:PRK12645 143 SISSFLLISYwyEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIanadEIQNSPLFIPAMILILLGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 220 KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIV 299
Cdd:PRK12645 223 KSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGIL 302
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 973693172 300 AFSTSSQLGLMMVTIGLNQPQL----------------AFLHICTHAFFKAMLFL 338
Cdd:PRK12645 303 AFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFM 357
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
43-337 |
2.99e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 97.26 E-value: 2.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 43 SFFISLLPLMIFLDQGMESITTNNMNTHMFDTNISFKFDHYS-------LIFTPIALYVTWSilefalwYMHADPNMNRF 115
Cdd:MTH00063 6 SLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTfgvllmlLICFYYSLLYTFH-------YFGGSYASFLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 116 FKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLI-GYGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEI 194
Cdd:MTH00063 79 NKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLIlFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 195 QQIFFLsknfdmtiplvgLILAAtgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTIC 274
Cdd:MTH00063 159 CCLFFF------------LIVFT--KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFS 224
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 973693172 275 LCLgALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLF 337
Cdd:MTH00063 225 VLL-LLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLF 286
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-338 |
8.93e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 92.63 E-value: 8.93e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 2 IMSSSLILVITI-LMLPLLTTLNPKPRNPEWARTHVKTAVSTSFFISLLPLmiFLDQGmesITTNNMNTHMFDTNISFKF 80
Cdd:PRK08375 1 MISHLLPLLVAVpLLAAALIVLLPKRRRLRWALALLVAALTFALAISLLPQ--VLDGG---VIAYVVGGWPPGIGIELRA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 81 DHYSLIFtpiaLYVTWSILEFALWYMHA--DPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYGR- 157
Cdd:PRK08375 76 DSLSALF----LLVTSILAIAALLYAIGygEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGd 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 158 ADANTAALQAVIYNRVGD------IGLILSMAWfamNLNSWEIQQIffLSKNFDMTIPLVGLILAATGKSAQFGLHPWLP 231
Cdd:PRK08375 152 RRALAAARKYLIVGLIGStflligVGLLYGVTG---TLNMADLAGA--LAENPTVVTAFGFVLLALALKAAVFPLHTWLP 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 232 SAMEGPTPVSALLHSSTMVVAGIFLLIRL-----HPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQ 306
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
330 340 350
....*....|....*....|....*....|....*
gi 973693172 307 LGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:PRK08375 307 MGYILLGLALLTPlalAAGLLHLLHHALMKGALFL 341
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-338 |
4.69e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 87.70 E-value: 4.69e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 109 DPNMNRFFKYLLLFLVAMITLV-TANNMFQLFIGWEGVGIMSFLLIGYGRADANTAAlqAVIYnrvgdigLILSMawFAM 187
Cdd:PRK07234 89 ESAKTRFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLLVAYPRTDRAIWV--GLRY-------LFYSN--VAM 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 188 NLNSWEIQQIFFLSKNFDMT----IPLVGLILAATG---KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRL 260
Cdd:PRK07234 158 LFYLIGAVLVYQANGTFAFSglatADPEAFALIALGllvKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC 237
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 973693172 261 HPLMENNNMALTIclcLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTiglnqPQLAFLHICTHAFFKAMLFL 338
Cdd:PRK07234 238 ALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-----PLVGGLYALAHGLVKSTLFL 307
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
84-338 |
4.85e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 84.64 E-value: 4.85e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 84 SLIFTPIALYvtwsilefALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGY--GRADAN 161
Cdd:PRK12667 92 ALVMFLILIY--------SYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYyrDRGDAV 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 162 TAALQ----------------AVIYNRVGDigliLSMAWFAMNLNSweiqQIFFLSKNFDMTIPLVGLILAA------TG 219
Cdd:PRK12667 164 EAAIKyaligavgttlyflalAFLYATFGT----LNMADLSAKIRG----LSFPLTGGLAGNPPLALGVALAlalwafTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 220 KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRL--------HPLMENNNMALTICLCLGALTTLFTATCAL 290
Cdd:PRK12667 236 KAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGALMMV 314
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 973693172 291 TQNDIKKIVAFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:PRK12667 315 VQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFL 365
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-338 |
2.40e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 79.48 E-value: 2.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 76 ISFKFDHYSLIFTPIALYVTWSILEFALWYMHAD--PNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLI 153
Cdd:PRK06589 77 IGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 154 GYGRADANTAALQAVIynrvgDIGLILSMAWF--AMNLNSWEIQQIFFLSKN---FDMTIPLVGLILAATGKSAQFGLHP 228
Cdd:PRK06589 157 GHTRNNISLSGGYKYL-----KILMISALLLFlpAVILIYTKTGNLDFVSGGlfsKNQSIILLLMFIYGIAKTAIFPVHS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 229 WLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALTI-----CLCLGALTTLFTATC-ALTQNDIKKIVAFS 302
Cdd:PRK06589 232 WLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSLkALKTDNIKKILAYS 311
|
250 260 270
....*....|....*....|....*....|....*....
gi 973693172 303 TSSQLGLMMVTIGLNQPQ---LAFLHICTHAFFKAMLFL 338
Cdd:PRK06589 312 TISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFY 350
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
117-338 |
2.49e-16 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 79.43 E-value: 2.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 117 KYLLLFLVAMIT---LVTANNMFQLFIGWEGVGIMSFLLIGYGR-ADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSW 192
Cdd:PRK08377 109 KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKtGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 193 EIQQIFFLSKNFDMTIPLVGLILAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRLHPLMENNN 268
Cdd:PRK08377 189 NMAHIAQLAGTIDPTVAQVGLALLIFGlavEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNAN 267
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 973693172 269 ---MALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:PRK08377 268 gwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFL 343
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
78-338 |
1.83e-15 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 77.00 E-value: 1.83e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 78 FKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKyLLLFLVAMITLVTANNMFQLF-IGWEGVGIMSFLLIGYG 156
Cdd:PRK08601 68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFA-LFTFTTGFASLAWLSGDLRLMaLCWGATLLGLTLLIGLN 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 157 RA--DANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFF------LSKNFDMTIPLVgLILAATGKSAQFGLHP 228
Cdd:PRK08601 147 KGwkVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSnenlaqLGTWEKTGINLL-LILAVMIPAAQWPFQR 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 229 WLPSAMEGPTPVSALLHSStMVVAGIFLLIRLHPLMeNNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLG 308
Cdd:PRK08601 226 WLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMG 303
|
250 260 270
....*....|....*....|....*....|
gi 973693172 309 LMMVTIGLNQPQLAFLHICTHAFFKAMLFL 338
Cdd:PRK08601 304 FMLVQCALGAYSAAIIHLILHGLFKATLFL 333
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
31-338 |
1.87e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.96 E-value: 1.87e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 31 WARTHVKTAVSTSFFISLLPLMIFLDQGMESITTNNMNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADP 110
Cdd:PRK08668 18 YLLKKINEKIGVIGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKND 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 111 NMnrFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYGRADANTAALQ----------------AVIYNRVG 174
Cdd:PRK08668 98 AY--FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKyfvlsaigayamlyaiFLIYAKTG 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 175 DIgLILSMAWFAMNLNSWEIQQIFFLSknfdmtiplvgLILAATGKSAQFGLHPWLPSAM-EGPTPVSALLHS--STMVV 251
Cdd:PRK08668 176 TF-DFADISQGLINDTSTGFALIVFLF-----------LLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGqlSKLGA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 252 AGIFLLIRLHPLMENNNMALT---------ICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP--- 319
Cdd:PRK08668 244 YGFLLVLYVLPGTKLFSEFGTyrgvplfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgf 323
|
330
....*....|....*....
gi 973693172 320 QLAFLHICTHAFFKAMLFL 338
Cdd:PRK08668 324 AGGLFHVFNHALFKGLFFL 342
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
121-338 |
2.92e-14 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 73.77 E-value: 2.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 121 LFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGY--GRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQif 198
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIAnhREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA-- 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 199 FLSKNFDMTIPLVGLILAATGKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-----LHPLMENNNM 269
Cdd:PRK06521 199 MRAAHLSPFWASLVFLLALFGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvfdlLGAPGWWWGV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 270 ALticLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL-------NQPQLAFL-------HICTHAFFKAM 335
Cdd:PRK06521 278 LV---LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSL 354
|
...
gi 973693172 336 LFL 338
Cdd:PRK06521 355 LFL 357
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
76-338 |
3.72e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 73.23 E-value: 3.72e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 76 ISFKFDHYSLIFTPIALYVTWSILEFALWY---MHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLL 152
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 153 I--GYGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKnfDMTIPLVGLILAATGKSAQFGLHPWL 230
Cdd:PRK08667 151 VmnDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAG--ILSLVFLLLFLGFGIKAGIIPFHKWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 231 PSAMEG-PTPVSALLhSSTMVVAGIFLLIRLHPLMENNNMAL-TICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLG 308
Cdd:PRK08667 229 PYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG 307
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 973693172 309 LMMVTIGL-------NQPQLAFL-------HICTHAFFKAMLFL 338
Cdd:PRK08667 308 IILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFL 351
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
7-312 |
2.32e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 70.53 E-value: 2.32e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 7 LILVITILMLPLLTTLNPKPRNPEWArthvktAVSTSFFISLLPLMIFLDQGMESITTNNMnthmfdtnisFKFDHYSLI 86
Cdd:COG1007 11 IILLLGALVLLLLDLFLPRRSRRLLA------GLALLGLLLALALLLLALGGGTGTAFGGM----------FVVDGFALF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 87 FTPIALYVTWSILEFALWYMhADPNMNRF-FKYLLLF-LVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYGRAD--ANT 162
Cdd:COG1007 75 FKLLILLAALLVLLLSRDYL-ERRGLLRGeFYALLLFaTLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDrrSSE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 163 AALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQI--FFLSKNFDMTIPLVGLILAATG---KSAQFGLHPWLPSAMEG- 236
Cdd:COG1007 154 AALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaALAAGGANSPLLLLGLVLVLAGlafKLSAVPFHMWTPDVYEGa 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 237 PTPVSALLhSSTMVVAGIFLLIRL-----HPLMENNNMALTIclcLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMM 311
Cdd:COG1007 234 PTPVTAFL-ATAPKIAAFAALLRLlveafPGLAADWQLLLAV---LAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLL 309
|
.
gi 973693172 312 V 312
Cdd:COG1007 310 L 310
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
5-337 |
3.32e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.88 E-value: 3.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 5 SSLILVITILMLPLLTT-LNPKPRNPEWARTHVKTAVSTSFFISLLPLMIFLDQGmesittnnmntHMFDTNISFKFDHY 83
Cdd:PRK06458 2 SYSILFALLLLIPLLASlLLFALRKRRLVATLNVLGITLTLILALWLVFTVPDAG-----------EIFAAGLWFFIDDL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 84 SLIFTPIALYVTWSILEFALWYM-------HADPNMNRFFKYLL-LFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIG- 154
Cdd:PRK06458 71 NVFFLALIGVVGFLTSLYSIGYMrhevehgELSPVTLRLYYGMYqLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGi 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 155 YGRADANTAALQAVIYNRVGD----IGLILSMAWFAMNLNSWEIQQIFFL----SKNFDMTIPLVGLILAATG---KSAQ 223
Cdd:PRK06458 151 YRTRASLEAAWKYIIICSVGVafalFGTILVYANAATVMGDGEMAILWTEllkhASLLDPTLMKLAFVFLLIGfgtKVGL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 224 FGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRLHPLMENNNMAL---TICLCLGALTTLFTATCALTQNDIKKIV 299
Cdd:PRK06458 231 FPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLF 309
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 973693172 300 AFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLF 337
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIF 350
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
130-337 |
2.91e-11 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 64.15 E-value: 2.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 130 VTANNMFQLFIGWEGVGIMSFLLI-GYGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNFDMti 208
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLVwARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAW-- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 209 plvgLILAATG-KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMEnnnmaltICLCLGALTTLFTAT 287
Cdd:PRK12668 188 ----LILIGFGvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVF 256
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 973693172 288 CALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQL---AFLHICTHAFFKAMLF 337
Cdd:PRK12668 257 FALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLF 309
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-116 |
9.09e-11 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 56.28 E-value: 9.09e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 973693172 67 MNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFF 116
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
86-338 |
5.46e-10 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 60.22 E-value: 5.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 86 IFTPIALYVTWSILEfalwymhadpNMNRFFKYLLLFLVA-MITLVTANNMFQLFIGWEGVGIMSFLLIG-YGRADANTA 163
Cdd:PRK05846 93 LLTPLAVLASWEEIK----------KRVKFYMAALLWLEGgVIGVFAALDLLLFYVFFEAMLIPMYFLIGvWGGKNRIYA 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 164 ALQAVIYNRVGdiGLILSMAWFAM------NLNSWEIQQIFFLSKNFDMTIPLVGLILAATG-KSAQFGLHPWLPSAM-E 235
Cdd:PRK05846 163 ATKFFLYTLLG--SLLMLVAIIYLvvvyynATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAvKMPMFPLHTWLPDAHvQ 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 236 GPTPVSALLhsstmvvAGIFL------LIR-LHPLMEN-NNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQL 307
Cdd:PRK05846 241 APTAGSVLL-------AGILLkmgaygLLRfSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHM 313
|
250 260 270
....*....|....*....|....*....|....
gi 973693172 308 GLMMVTIG-LNQP--QLAFLHICTHAFFKAMLFL 338
Cdd:PRK05846 314 GFVTLGIFaGNQLgiQGAIFQMISHGLSSAALFL 347
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
76-320 |
1.85e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.81 E-value: 1.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 76 ISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGY 155
Cdd:PRK12663 71 IQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 156 G-RADANTAALQAVIYNRVGD------IGLI------LSMAWFAMNLNSWEIQQIFflsknfdMTIPLVgLILAATGKSA 222
Cdd:PRK12663 151 GqEREQLRGAIKYVVLNLIGSwlfllgIGLLygtfgtLNMAHIAMRLNDMGDTATL-------TTIALL-FLLAFGMKAA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 223 QFGLHpWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALT--ICLCLGALTTLFTATCALTQNDIKKIVA 300
Cdd:PRK12663 223 LFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLhpLLATMAAITMVIGALGALAYKDIRRIAG 301
|
250 260
....*....|....*....|
gi 973693172 301 FSTSSQLGLMMVTIGLNQPQ 320
Cdd:PRK12663 302 YQVISSIGFILLGLALGTPA 321
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
220-337 |
1.80e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 55.53 E-value: 1.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 220 KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRLHPLMENNNMALT---ICLCLGALTTLFTATCALTQNDI 295
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQfsnVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 973693172 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAF---LHICTHAFFKAMLF 337
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLF 342
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-338 |
3.78e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 54.57 E-value: 3.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 76 ISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGY 155
Cdd:PRK07691 71 IVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 156 GRADAN-TAALQAVIYNRVGDIGLILSMAWF-----AMNLN--SWEIQQIFFLSKNFDMTIPLVGLILAATgKSAQFGLH 227
Cdd:PRK07691 151 GGTKIQlRESIKYVLINVVSSAFFVVAVAILysvvgTLNMAdiSVKIAELSAGQTGLITVVAILFLFVFAT-KAGLFPLY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 228 PWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNMALT--ICLCLGALTTLFTATCALTQNDIKKIVAFSTSS 305
Cdd:PRK07691 230 FWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKKIIIYNIMI 309
|
250 260 270
....*....|....*....|....*....|....*.
gi 973693172 306 QLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:PRK07691 310 AVGVILVGVAMMTEsgmIGAIYYLIHDMIVKAALFL 345
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
77-312 |
6.30e-08 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 53.67 E-value: 6.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 77 SFKFDHYSLIFTPIALYVTWSILEFALWYMhADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYG 156
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 157 R--ADANTAALQAVIynrVGDIG---LILSMAWFAMNLNSWEIQQIFFLSKNFDMTIPL----VGLILAATG-KSAQFGL 226
Cdd:PRK05777 147 RdrRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAfKLSAVPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 227 HPWLPSAMEG-PTPVSALLHSSTMVvAGIFLLIRL-----HPLMENNNMALTIclcLGALTTLFTATCALTQNDIKKIVA 300
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLRLlvvafGGLSEDWQQVLAI---IAIASMLVGNLAALSQTNIKRLLA 299
|
250
....*....|..
gi 973693172 301 FSTSSQLGLMMV 312
Cdd:PRK05777 300 YSSIAHAGYLLV 311
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-338 |
1.57e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.81 E-value: 1.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 114 RFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGYGR-ADANTAALQAVIYNRVG------DIGLILSMAWFA 186
Cdd:PRK12662 111 SFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRdKKALVAAFEYLIIGTIGatfyliGIGFLYAITGTL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 187 MNLNSWEIQQIffLSKNFDMTIPLVGLILAATGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRLHPLME 265
Cdd:PRK12662 191 NMGDMFLIIQD--LPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYDVF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 266 NNNMALT------ICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQ---LAFLHICTHAFFKAML 336
Cdd:PRK12662 268 KANFVFTtlpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSAL 347
|
..
gi 973693172 337 FL 338
Cdd:PRK12662 348 FM 349
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
186-338 |
5.39e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 50.59 E-value: 5.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 186 AMNLNSWEIQQiffLSKNFDMTIplvgLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirlhpLME 265
Cdd:MTH00112 78 AWNTGQWDITQ---LTNPTSCTL----LTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMT 145
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 973693172 266 NNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQLAFLHICTHAFFKAMLFL 338
Cdd:MTH00112 146 SNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL 217
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
125-316 |
9.95e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.17 E-value: 9.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 125 AMITLVTANNMFQLFIGWEGVGIMSFLLIGYGRADANTaalqAVIYNRVGDIGLILSMAWFAMNLnsweiqqIFFLSKNF 204
Cdd:PRK06459 84 GMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRP----AFVFMAFGELSTVLILAGFAWAF-------IISGTTNF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 205 DMTIPLVGLILAATGKSAQFGLHP-----WLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRLHPLMEN---NNMALTIcL 275
Cdd:PRK06459 153 SYLPSPVPLILASFGFIIKMGMMPflvseWLPIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTipiGYFGLTI-L 230
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 973693172 276 CLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
Cdd:PRK06459 231 AIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGL 271
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
3-338 |
2.35e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 48.93 E-value: 2.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 3 MSSSLILVItiLMLPLLTTLNPKPRNPEWARTHVKTAVSTSFFISLLPLMIF--------LDQGMESITTNNMNTHMFDT 74
Cdd:PRK06473 1 MLSALIWIP--LLGAILIGFWPSGINGKLARSVALVIASVLLLLSLVLAFQFdpgnpnqqFTEFIPWIDSLGLSYHLGVD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 75 NISFKFDHYSLIFTPIALYVTwsilefalwymhaDPNMNR--FFKYLLLFLVAMIT-LVTANNMFQLFIGWEGVGIMSFL 151
Cdd:PRK06473 79 GLSLPLLVLNSLLTLIAIYSS-------------DESIQRprFYYSLLLLLNAGVSgAFLAQDLLLFFLFYELELIPLYL 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 152 LIG-YGRADANTAALQAVIYNRVGDIGLILS---MAWFAmNLNSWEIQQIFFLSKNFDMTIPLVGLILAATG-KSAQFGL 226
Cdd:PRK06473 146 LIAiWGGQRRGYAATKFLLYTAISGILILVSflgLVWLS-GASSFDYEPLRSHTLPLSTQLLLLAPILVGFGiKIPLVPF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 227 HPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIR--LHPLMENNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFST 303
Cdd:PRK06473 225 HTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
330 340 350
....*....|....*....|....*....|....*...
gi 973693172 304 SSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFL 338
Cdd:PRK06473 304 IGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFL 341
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
118-314 |
2.95e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 48.85 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 118 YLLLFLVAMI---TLVTANNMFQLFIGWEGVGIMSFLLIGYGRAD--ANTAALQAVIYNRVGDIGLILSMAW-FAMNLNS 191
Cdd:CHL00049 113 FLLFVLTATLggmFLCGANDLITIFVALECLSLCSYLLSGYTKKDvrSNEATMKYLLMGGASSSILVYGFSWlYGLSGGE 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 192 WEIQQIFFLSKNFDMTIPL---VGLILAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR----L 260
Cdd:CHL00049 193 IELQEIVNGLINTQMYNSPgisIALIFITVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdiP 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 973693172 261 HPLMENN-NMALTIclcLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTI 314
Cdd:CHL00049 272 FYFSSNEwHLLLEI---LAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 323
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
77-337 |
7.00e-06 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 47.74 E-value: 7.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 77 SFKFDHYSLIFTP-IALYVTWSILEFALWYMHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGY 155
Cdd:PRK02504 73 SFNADNLSIAFRAiIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 156 GRADA--NTAALQaviYNRVGD---------IGLILSMAWFAMNLNswEIQQIFFLSKNFDMTIPLVGLILAATGKSAQF 224
Cdd:PRK02504 153 MKRDPrsNEAALK---YLLIGAassaiflygSSLLYGLSGGSTQLS--AIALALITSPSLGLALALVFVIAGIAFKISAV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 225 GLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRLhplmennnmaltICLCLGALTT----LFTA----------TCA 289
Cdd:PRK02504 228 PFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTAlailsmvlgnVVA 294
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 973693172 290 LTQNDIKKIVAFSTSSQLGLMMvtIGLnqpqlaflhIC-THAFFKAMLF 337
Cdd:PRK02504 295 LAQTSMKRMLAYSSIGQAGFVM--IGL---------VAgTEAGYASMVF 332
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
114-315 |
1.34e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 43.54 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 114 RFFKYLLLFLVA-MITLVTANNMFQLFIGWEGVGIMSFLLIG-YGRADANTAALQAVIYNRVGDIGLI---LSMAWFAmN 188
Cdd:PRK02546 115 KLFYFLMLAMYGgQIAVFAVQDMLLFFLAWELELIPVYLLLAiWGGKKRQYAATKFILYTAGSSLFILlaaLAMAFYG-D 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 189 LNSWEIQQIffLSKNFDMTIPLV---GLILAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFLLIRLHPLM 264
Cdd:PRK02546 194 TPTFDMTAL--AAKDFGLGFQLLcyaGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLKMGGYALL 264
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 973693172 265 ENNNMAL--------TICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIG 315
Cdd:PRK02546 265 RMNAGMLpdahaqfaPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG 323
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
41-310 |
1.92e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 43.00 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 41 STSFFISLLPLMIFLDQGMesittnNMNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHADPnMNRFFKYLL 120
Cdd:MTH00206 24 STTFFSFLIALLFLLWFKW------SSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEP-INRQRIYIT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 121 LFLVAMITLV---TANNMFQLFIGWEGVGIMSFLLIGY-----GRADANTAALqavIYNRVGDIGLILSMAWFAMNLNSW 192
Cdd:MTH00206 97 LLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRwgnqkERLNAGYYFL---FYTLIGSLPLLIALLFLQNSLGSL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 193 EIQQIFFLSKNFDMTIPL-VGLILAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRLHPLM 264
Cdd:MTH00206 174 SLYILYFSKLTTWNNNLWwLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILIL 246
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 973693172 265 EN-NNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLM 310
Cdd:MTH00206 247 GPsTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLV 293
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
3-318 |
2.43e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 42.81 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 3 MSSSLILVITILMLPLLTTLNPkprnpeWARThvktaVSTSFFISLLPLMifldqgmeSITTNNMNTHMFDTNISFKFDH 82
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWS------WALT-----FSTLLLLSLFTLL--------NLYPMSAPYSMFTESLSSDMLS 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 83 YSLIFTPIALYVTWSILEFALWYMHADPNMnrFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMS-FLLIGYG-RADA 160
Cdd:MTH00014 62 APLITLTLWITALMILASFKIFQNNKAPKT--FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTlFLILGWGyQPER 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 161 NTAALQAVIYNRVGDIGLILSMAWFAMNLNSWeiqQIFFLSKNFDMTIPL----VGLILAATGKSAQFGLHPWLPSA-ME 235
Cdd:MTH00014 140 LQASFYLMIYTVTASLPLLMSILLIFYTNNSL---SMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAhVE 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 236 GPTpvsallhSSTMVVAGIFL------LIRLHPLMENNNMALT-----ICLCLGALTTLFtatcALTQNDIKKIVAFSTS 304
Cdd:MTH00014 217 APV-------AGSMILAGILLklggygLLRMSSLFMHINKSLSapfssISLVGAVITSLI----CIRQPDLKSLIAYSSV 285
|
330
....*....|....
gi 973693172 305 SQLGLMMVTIGLNQ 318
Cdd:MTH00014 286 GHMGLMTAGIMSNT 299
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
226-338 |
3.09e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.51 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 226 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHplMENNNMAL---TICLCLGALTTLFTATCALTQNDIKKIVAFS 302
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS--LLGGNAPLwwgVALLVLGMITAFVGGLYALMEHNIQRLLAYH 276
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 973693172 303 TSSQLGLMMVTIG-------LNQPQLAFL-------HICTHAFFKAMLFL 338
Cdd:PRK08042 277 TLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFL 326
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
3-310 |
5.27e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 41.50 E-value: 5.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 3 MSSSLILVITILMLPLLTtlnpkPRNPEWArthvkTAVSTSFFISLLPlmIFLDQGMESITTNNMNTHMFDTNISFKFDH 82
Cdd:MTH00044 1 MITLILLSLGIAITSWIV-----PKNKLWP-----ISISQSSLISLLS--LFLLNNHWSSSWHNLSLSLATDSLSSPLII 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 83 YSLIFTPIALYVTWSILEFalwymHADPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGygRADANT 162
Cdd:MTH00044 69 LSCWLAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILIT--RWGAQK 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 163 AALQA----VIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSK----NFDMTIPLVGLILAATGKSAQFGLHPWLPSA- 233
Cdd:MTH00044 142 ERIQAglyfLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLtslsSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAh 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 234 MEGPTPVSallhsstMVVAGIFL------LIRL-----HPLMENNNMALTICLCLGALttlFTATCALTQNDIKKIVAFS 302
Cdd:MTH00044 222 VEAPVAGS-------MILAAILLklggygLIRLinlfsLPSANNISFILIVFCCWGAL---ITSIICLRQTDLKALIAYS 291
|
....*...
gi 973693172 303 TSSQLGLM 310
Cdd:MTH00044 292 SVGHMSLV 299
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
111-314 |
1.01e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 40.52 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 111 NMNRFFKYLLLFLVAMITLV-TANNMFQLFIGWEGVGIMSFLLI---GYG--RadantaaLQA----VIYNRVGDIGLIL 180
Cdd:MTH00163 84 NYSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLIlgwGYQpeR-------LQAgiylLFYTLFASLPLLV 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 181 SMAWFAMNLNSWeiqQIFFLSKNFDMTIPL-VGLILAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL-- 256
Cdd:MTH00163 157 GIFYLYNNSGSL---SFFLLNFFGSLNFLWyLSMILAFLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLkl 226
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 973693172 257 ----LIRLHPLMENNNMAL-TICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTI 314
Cdd:MTH00163 227 ggygLLRVMSFFSKLGLKFnYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
76-314 |
2.42e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.52 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 76 ISFKFDHYSLIFTPIALYVTWSILEFAlwymhadpnMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGY 155
Cdd:MTH00226 103 ISIYFIILTGFIVPCSILISWHSVKYL---------TKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 156 --GRADANTAALQAVIYNRVGDIGLILSMawFAMNLNSWEIQQIFFLSKNFDMTIPL-----VGLILAATGKSAQFGLHP 228
Cdd:MTH00226 174 wgSREEKMQAAYYFFFYTLIGSVLMLLCL--FSLYNIHGTTDYLTLASCSHVVSEQTqkwifLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 229 WLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRLH----PLMENNNMALTICLCLGALTTLFTATCalTQNDIKKIVAFST 303
Cdd:MTH00226 252 WLPKAhVEAPVAGSVLL-AGILLKLGGYGLVRLSwpilPLGAQNLAPAVIAMGIVGIVYGSFATC--RQIDVKRLVAYSS 328
|
250
....*....|.
gi 973693172 304 SSQLGLMMVTI 314
Cdd:MTH00226 329 VAHMGLVSITL 339
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
114-312 |
2.89e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 39.31 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 114 RFFKYLLLFLVAMIT-LVTANNMFQLFIGWEGVGIMSFLLIG-YGRADANTAALQAVIYNRVGD---IGLILSMAWFAMN 188
Cdd:PRK07363 107 RLYYSLILLINGGIAgALLAQNLLLFFLFYELELIPFYLLIAiWGGEKRGYASIKFLIYTAVSGllvLAAFLGIVWLSGS 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 973693172 189 LN-SWEIQQIFFLSKNFDMtIPLVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIR--LHPLME 265
Cdd:PRK07363 187 TSfDYDAISTQNLSLNTQL-ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRfgLQLFPQ 265
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 973693172 266 NNNMALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMV 312
Cdd:PRK07363 266 TWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILV 312
|
|
| |
