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Conserved domains on  [gi|9630000|ref|NP_046218|]
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hypothetical protein OpmnVgp062 [Orgyia pseudotsugata multiple nucleopolyhedrovirus]

Protein Classification

ChaB family protein( domain architecture ID 10533031)

ChaB family protein similar to putative cation transport regulator ChaB that is a putative regulator of ChaA, a Na+/H+ antiporter that also has Ca+/H+ activity

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ChaB pfam06150
ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ...
 4-63 5.74e-08

ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ChaB in E. coli and is found next to ChaA which is a cation transporter protein. ChaB may be regulate ChaA function in some way.


:

Pssm-ID: 428792  Cd Length: 60  Bit Score: 47.25  E-value: 5.74e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 9630000      4 LPDTLyeQEKMPRRAKRLFVDTF--SQHHKLNAGDEEAAMQKARQALEERYVRVNDLQWIPR 63
Cdd:pfam06150   1 LPETV--RRHLPEHAQRIFIEAFnsALEEYGDGSDEERAHRVAWAAVKHKYEKDEGGKWEPK 60
 
Name Accession Description Interval E-value
ChaB pfam06150
ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ...
 4-63 5.74e-08

ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ChaB in E. coli and is found next to ChaA which is a cation transporter protein. ChaB may be regulate ChaA function in some way.


Pssm-ID: 428792  Cd Length: 60  Bit Score: 47.25  E-value: 5.74e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 9630000      4 LPDTLyeQEKMPRRAKRLFVDTF--SQHHKLNAGDEEAAMQKARQALEERYVRVNDLQWIPR 63
Cdd:pfam06150   1 LPETV--RRHLPEHAQRIFIEAFnsALEEYGDGSDEERAHRVAWAAVKHKYEKDEGGKWEPK 60
 
Name Accession Description Interval E-value
ChaB pfam06150
ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ...
 4-63 5.74e-08

ChaB; This family of proteins contain a conserved 60 residue region. This protein is known as ChaB in E. coli and is found next to ChaA which is a cation transporter protein. ChaB may be regulate ChaA function in some way.


Pssm-ID: 428792  Cd Length: 60  Bit Score: 47.25  E-value: 5.74e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 9630000      4 LPDTLyeQEKMPRRAKRLFVDTF--SQHHKLNAGDEEAAMQKARQALEERYVRVNDLQWIPR 63
Cdd:pfam06150   1 LPETV--RRHLPEHAQRIFIEAFnsALEEYGDGSDEERAHRVAWAAVKHKYEKDEGGKWEPK 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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