|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
8.66e-66 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 202.32 E-value: 8.66e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
2.01e-29 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 108.72 E-value: 2.01e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFH-LLFPFIILAMVIIHLLFLHQTGSTNPLG----LHSNTDKIPFHPYFSFKDITGFIIMISLLTI 75
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 962093883 76 *CFSSP*Ll*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:COG1290 258 LAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
2.79e-23 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 87.32 E-value: 2.79e-23
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 962093883 41 NPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSSP*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-87 |
3.38e-15 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 67.27 E-value: 3.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFH-LLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFS 79
Cdd:pfam13631 82 GPFPGTATIPRFYALHiLLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQI 161
|
....*...
gi 962093883 80 SP*LL*DP 87
Cdd:pfam13631 162 NPIWLGGP 169
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-115 |
8.66e-66 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 202.32 E-value: 8.66e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00156 157 GFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLIN 236
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00156 237 PYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAIL 271
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-115 |
1.14e-59 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 187.42 E-value: 1.14e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00145 168 GFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00145 248 PNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-115 |
2.29e-59 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 186.40 E-value: 2.29e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00131 167 GFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00131 247 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-115 |
4.65e-58 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 182.81 E-value: 4.65e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00191 164 GFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFS 243
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00191 244 PNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAIL 278
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-115 |
5.62e-57 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 180.48 E-value: 5.62e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00119 168 GFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00119 248 PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-115 |
8.88e-57 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 179.88 E-value: 8.88e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00074 168 GFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFS 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00074 248 PNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-115 |
3.87e-54 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 172.94 E-value: 3.87e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00016 168 GFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLW 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00016 248 PNILGDPENFIPANPLVTPTHIKPEWYFLWAYAIL 282
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-115 |
7.67e-53 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 169.82 E-value: 7.67e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00100 167 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFS 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00100 247 PDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-115 |
1.82e-52 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 168.73 E-value: 1.82e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00034 167 GFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLF 246
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00034 247 PTALNDPENFIPANPLVTPPHIQPEWYFLFAYAIL 281
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-115 |
1.21e-43 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 145.83 E-value: 1.21e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00224 168 GFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFE 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00224 248 PNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAIL 282
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-115 |
1.67e-41 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 140.22 E-value: 1.67e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00022 166 GFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFA 245
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00022 246 PNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAIL 280
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-115 |
3.21e-40 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 137.14 E-value: 3.21e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00053 168 GFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLF 247
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00053 248 PYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAIL 282
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-115 |
1.70e-34 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 121.59 E-value: 1.70e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGfIIMISLLTI*CFSS 80
Cdd:MTH00086 156 GFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFY 234
|
90 100 110
....*....|....*....|....*....|....*
gi 962093883 81 P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00086 235 PFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAIL 269
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-115 |
1.79e-32 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 116.58 E-value: 1.79e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSS 80
Cdd:MTH00033 164 GFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEP 243
|
90 100 110
....*....|....*....|....*....|....*..
gi 962093883 81 --P*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00033 244 riETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAIL 280
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-115 |
2.01e-29 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 108.72 E-value: 2.01e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFH-LLFPFIILAMVIIHLLFLHQTGSTNPLG----LHSNTDKIPFHPYFSFKDITGFIIMISLLTI 75
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 962093883 76 *CFSSP*Ll*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:COG1290 258 LAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGIL 295
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-115 |
5.58e-28 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 104.29 E-value: 5.58e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGSTNPLGLHSN-TDKIPFHPYFSFKDITGFIIMISLLTI*CFS 79
Cdd:MTH00046 158 GFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFV 237
|
90 100 110
....*....|....*....|....*....|....*.
gi 962093883 80 SP*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:MTH00046 238 SPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAML 273
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
41-115 |
2.79e-23 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 87.32 E-value: 2.79e-23
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 962093883 41 NPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFSSP*LL*DPDNFIPANPLVTPVHIQPEWYFLFADAIL 115
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAIL 75
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-87 |
3.38e-15 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 67.27 E-value: 3.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFH-LLFPFIILAMVIIHLLFLHQTGSTNPLGLHSNTDKIPFHPYFSFKDITGFIIMISLLTI*CFS 79
Cdd:pfam13631 82 GPFPGTATIPRFYALHiLLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQI 161
|
....*...
gi 962093883 80 SP*LL*DP 87
Cdd:pfam13631 162 NPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
92-115 |
8.92e-09 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 49.01 E-value: 8.92e-09
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-40 |
9.69e-09 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 50.83 E-value: 9.69e-09
10 20 30 40
....*....|....*....|....*....|....*....|
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTGST 40
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-38 |
1.64e-06 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 44.30 E-value: 1.64e-06
10 20 30
....*....|....*....|....*....|....*...
gi 962093883 1 GFAVDN*TLT**FTFHLLFPFIILAMVIIHLLFLHQTG 38
Cdd:pfam00033 152 SFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
|