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MULTISPECIES: Sec-independent protein translocase protein TatB [Pseudoalteromonas]
Sec-independent protein translocase family protein( domain architecture ID 241)
Sec-independent protein translocase family protein such as Sec-independent protein translocase proteins TatA and TatB, which are part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
TatA_B_E super family | cl00788 | mttA/Hcf106 family; Members of this protein family are involved in a sec independent ... |
19-78 | 7.33e-19 | ||
mttA/Hcf106 family; Members of this protein family are involved in a sec independent translocation mechanism. This pathway has been called the DeltapH pathway in chloroplasts. Members of this family in E.coli are involved in export of redox proteins with a "twin arginine" leader motif. The actual alignment was detected with superfamily member TIGR01410: Pssm-ID: 445098 [Multi-domain] Cd Length: 80 Bit Score: 73.89 E-value: 7.33e-19
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Name | Accession | Description | Interval | E-value | ||
tatB | TIGR01410 | twin arginine-targeting protein translocase TatB; This model represents the TatB protein of a ... |
19-78 | 7.33e-19 | ||
twin arginine-targeting protein translocase TatB; This model represents the TatB protein of a Sec-independent system for transporting folded proteins, often with a bound redox cofactor, across the bacterial inner membrane. TatC is the multiple membrane spanning component. TatB, like the related TatA/E proteins, appears to span the membrane one time. The tat system recognizes proteins with an elongated signal sequence containing a conserved R-R in a motif approximated by RRxFLK N-terminal to the transmembrane helix. TIGRFAMs model TIGR01409 describes this twin-Arg signal sequence. A similar system, termed Delta-pH-dependent transport, operates on chloroplast-encoded proteins. [Protein fate, Protein and peptide secretion and trafficking] Pssm-ID: 130477 [Multi-domain] Cd Length: 80 Bit Score: 73.89 E-value: 7.33e-19
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TatA | COG1826 | Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, ... |
19-66 | 1.12e-08 | ||
Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, secretion, and vesicular transport]; Pssm-ID: 441431 [Multi-domain] Cd Length: 72 Bit Score: 48.01 E-value: 1.12e-08
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PRK04654 | PRK04654 | sec-independent translocase; Provisional |
19-89 | 1.19e-06 | ||
sec-independent translocase; Provisional Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 44.80 E-value: 1.19e-06
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Name | Accession | Description | Interval | E-value | ||
tatB | TIGR01410 | twin arginine-targeting protein translocase TatB; This model represents the TatB protein of a ... |
19-78 | 7.33e-19 | ||
twin arginine-targeting protein translocase TatB; This model represents the TatB protein of a Sec-independent system for transporting folded proteins, often with a bound redox cofactor, across the bacterial inner membrane. TatC is the multiple membrane spanning component. TatB, like the related TatA/E proteins, appears to span the membrane one time. The tat system recognizes proteins with an elongated signal sequence containing a conserved R-R in a motif approximated by RRxFLK N-terminal to the transmembrane helix. TIGRFAMs model TIGR01409 describes this twin-Arg signal sequence. A similar system, termed Delta-pH-dependent transport, operates on chloroplast-encoded proteins. [Protein fate, Protein and peptide secretion and trafficking] Pssm-ID: 130477 [Multi-domain] Cd Length: 80 Bit Score: 73.89 E-value: 7.33e-19
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TatA | COG1826 | Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, ... |
19-66 | 1.12e-08 | ||
Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, secretion, and vesicular transport]; Pssm-ID: 441431 [Multi-domain] Cd Length: 72 Bit Score: 48.01 E-value: 1.12e-08
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PRK04654 | PRK04654 | sec-independent translocase; Provisional |
19-89 | 1.19e-06 | ||
sec-independent translocase; Provisional Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 44.80 E-value: 1.19e-06
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PRK01371 | PRK01371 | Sec-independent protein translocase protein TatB; |
19-51 | 1.35e-03 | ||
Sec-independent protein translocase protein TatB; Pssm-ID: 179287 [Multi-domain] Cd Length: 137 Bit Score: 35.84 E-value: 1.35e-03
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Blast search parameters | ||||
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