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Conserved domains on  [gi|959123947|ref|YP_009184446|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Euphractus sexcinctus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.21e-63

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 188.61  E-value: 1.21e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 959123947  81 AKNLTPMLITALFLISLLALGLAYEWLQKGLEWTE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.21e-63

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 188.61  E-value: 1.21e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 959123947  81 AKNLTPMLITALFLISLLALGLAYEWLQKGLEWTE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 1.80e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.03  E-value: 1.80e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   18 IIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IAllLPLPWAAQAKNL-TPMLITALFLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVV--FLFPWAVSFRELgWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 959123947   97 LLALGLAYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 13-113 3.35e-19

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 76.31  E-value: 3.35e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947  13 LASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IAllLPLPWAAQAKNLTPM-LITA 91
Cdd:COG0838   18 LALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVV--FLFPWAVVFRELGWFgLIEM 95

                         90       100
                 ....*....|....*....|..
gi 959123947  92 LFLISLLALGLAYEWLQKGLEW 113
Cdd:COG0838   96 LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.21e-63

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 188.61  E-value: 1.21e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 959123947  81 AKNLTPMLITALFLISLLALGLAYEWLQKGLEWTE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 9.86e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 135.82  E-value: 9.86e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLT-LTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAA 79
Cdd:MTH00136   1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 959123947  80 QAKNLTPMLITALFLISLLALGLAYEWLQKGLEWTE 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 1.71e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 130.11  E-value: 1.71e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   3 LMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQAK 82
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 959123947  83 NLTPMLITALFLISLLALGLAYEWLQKGLEWTE 115
Cdd:MTH00069  82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 2.84e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 124.61  E-value: 2.84e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 959123947  81 AKNLTPMLITALFLISLLALGLAYEWLQKGLEWT 114
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.91e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 109.69  E-value: 1.91e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 959123947  81 AKNLTPMLITALFLISLLALGLAYEWLQKGLEWTE 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-113 3.49e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 98.82  E-value: 3.49e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   3 LMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQAk 82
Cdd:MTH00203   4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQL- 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 959123947  83 nLTPMLITALFLISLLALGLAYEWLQKGLEW 113
Cdd:MTH00203  83 -SSLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 1.80e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.03  E-value: 1.80e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   18 IIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IAllLPLPWAAQAKNL-TPMLITALFLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVV--FLFPWAVSFRELgWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 959123947   97 LLALGLAYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 1.36e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 84.91  E-value: 1.36e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYM-EKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAA 79
Cdd:MTH00148   2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 959123947  80 QAKNLTPMLITALFLISLLALGLAYEWLQKGLEWTE 115
Cdd:MTH00148  82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 2-113 1.08e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 79.82  E-value: 1.08e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   2 NLMLTLTINATLASLLIIIAFWL-PQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQ 80
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 959123947  81 AKNLTPMLITALFLISLLALGLAYEWLQKGLEW 113
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 3.49e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 78.88  E-value: 3.49e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYM--EKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWA 78
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMdrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 959123947  79 AQAKNLTPMLITALFLISLLALGLAYEWLQKGLEW 113
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 13-113 3.35e-19

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 76.31  E-value: 3.35e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947  13 LASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IAllLPLPWAAQAKNLTPM-LITA 91
Cdd:COG0838   18 LALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVV--FLFPWAVVFRELGWFgLIEM 95

                         90       100
                 ....*....|....*....|..
gi 959123947  92 LFLISLLALGLAYEWLQKGLEW 113
Cdd:COG0838   96 LVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-113 1.24e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 74.75  E-value: 1.24e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947  32 EKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQAKNLTPMLITALFLIsLLALGLAYEWLQKGL 111
Cdd:MTH00055  37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGGL 115


                 ..
gi 959123947 112 EW 113
Cdd:MTH00055 116 EW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 2.25e-17

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 71.25  E-value: 2.25e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IAllLPLPWAAQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEIS--FLFPWCVL 78

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 959123947  81 AKNLTPM--LITALFLIsLLALGLAYEWLQKGLEW 113
Cdd:MTH00018  79 YNQIAPFgfWTMVGFLF-ILTLGLIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-114 1.03e-16

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 69.89  E-value: 1.03e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   7 LTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IAllLPLPWAAQAKNLT- 85
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAA--FLFPWAVSFREIGw 92

                         90       100
                 ....*....|....*....|....*....
gi 959123947  86 PMLITALFLISLLALGLAYEWLQKGLEWT 114
Cdd:PRK06602  93 LGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-113 1.90e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.19  E-value: 1.90e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947  32 EKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQAKNLTPMLITALFLIsLLALGLAYEWLQKGL 111
Cdd:MTH00030  42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYTFLI-VLAIGLAYEWIKGGL 120


                 ..
gi 959123947 112 EW 113
Cdd:MTH00030 121 EW 122
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-114 4.15e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 68.35  E-value: 4.15e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWL--PQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWA 78
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 959123947  79 AQAKNLTPMLITALFLISLLALGLAYEWLQKGLEWT 114
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ndhC CHL00022
NADH dehydrogenase subunit 3
 13-114 3.90e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 53.07  E-value: 3.90e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947  13 LASLLIIIAFWLPQL----NVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQAKNL-TPM 87
Cdd:CHL00022  16 ISSLIPILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFD--VETVFLYPWAMSFDVLgVSA 93

                         90       100
                 ....*....|....*....|....*..
gi 959123947  88 LITALFLISLLALGLAYEWLQKGLEWT 114
Cdd:CHL00022  94 FIEALIFVLILIVGLVYAWRKGALEWS 120
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-113 2.56e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 48.20  E-value: 2.56e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947  32 EKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPWAAQAKNLTPM-LITALFLISLLALGLAYEWLQKG 110
Cdd:PRK07756  41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFD--VETLFLYPWAVAYDKLGLFaLIEMLIFVVMLLVGLAYAWKKKV 118


                 ...
gi 959123947 111 LEW 113
Cdd:PRK07756 119 LQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 2.05e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 40.43  E-value: 2.05e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947  33 KSSPYECGFDPMGSARLP--FSMKFFLVAITFLLFD**IALLLPLPWAAQAKNL-TPMLITALFLISLLALGLAYEWLQK 109
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFD--IEIVFLYPWAVSFDALgVFGLVEMALFMLTVFVAYAYVWRRG 114


                 ....*
gi 959123947 110 GLEWT 114
Cdd:PRK07928 115 GLEWD 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-113 1.02e-04

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 38.88  E-value: 1.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   3 LMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARlPFSMKFFLVAITFLLFD**IalLLPLPWAAQAK 82
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEI--VFMFPWAVDFK 93

                         90       100       110
                 ....*....|....*....|....*....|..
gi 959123947  83 NLTPM-LITALFLISLLALGLAYEWLQKGLEW 113
Cdd:PRK08489  94 LLGLFgLIEMLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-114 3.28e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 34.48  E-value: 3.28e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 959123947   1 MNLMLTLTINATLASLLIIIAFWLPQLNVYMEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFD**IALLLPLPwaaq 80
Cdd:MTH00092   2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLL---- 77

                         90       100       110
                 ....*....|....*....|....*....|....
gi 959123947  81 aKNLTPMLITALFLISLLALGLAYEWLQKGLEWT 114
Cdd:MTH00092  78 -VSDFSSLISFFMLMIFIFFGFYMEWWYGKLIWV 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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