fumarate hydratase isoform 4 [Homo sapiens]
lyase family protein( domain architecture ID 97)
lyase family protein belongs to a superfamily of enzymes that catalyze beta-elimination reactions in which a C-N or C-O bond is cleaved and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits
List of domain hits
Name | Accession | Description | Interval | E-value | |||
FumC super family | cl43028 | Fumarate hydratase class II [Energy production and conversion]; Fumarate hydratase class II is ... |
49-161 | 3.97e-72 | |||
Fumarate hydratase class II [Energy production and conversion]; Fumarate hydratase class II is part of the Pathway/BioSystem: TCA cycle The actual alignment was detected with superfamily member COG0114: Pssm-ID: 439884 [Multi-domain] Cd Length: 461 Bit Score: 223.75 E-value: 3.97e-72
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Name | Accession | Description | Interval | E-value | |||
FumC | COG0114 | Fumarate hydratase class II [Energy production and conversion]; Fumarate hydratase class II is ... |
49-161 | 3.97e-72 | |||
Fumarate hydratase class II [Energy production and conversion]; Fumarate hydratase class II is part of the Pathway/BioSystem: TCA cycle Pssm-ID: 439884 [Multi-domain] Cd Length: 461 Bit Score: 223.75 E-value: 3.97e-72
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Fumarase_classII | cd01362 | Class II fumarases; This subgroup contains Escherichia coli fumarase C, human mitochondrial ... |
51-161 | 5.63e-72 | |||
Class II fumarases; This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. Pssm-ID: 176465 [Multi-domain] Cd Length: 455 Bit Score: 223.15 E-value: 5.63e-72
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fumC | PRK00485 | fumarate hydratase; Reviewed |
49-161 | 2.61e-70 | |||
fumarate hydratase; Reviewed Pssm-ID: 234779 [Multi-domain] Cd Length: 464 Bit Score: 219.19 E-value: 2.61e-70
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fumC_II | TIGR00979 | fumarate hydratase, class II; Putative fumarases from several species (Mycobacterium ... |
50-162 | 1.25e-63 | |||
fumarate hydratase, class II; Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs. [Energy metabolism, TCA cycle] Pssm-ID: 130052 [Multi-domain] Cd Length: 458 Bit Score: 201.88 E-value: 1.25e-63
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Lyase_1 | pfam00206 | Lyase; |
58-158 | 6.69e-34 | |||
Lyase; Pssm-ID: 425524 [Multi-domain] Cd Length: 312 Bit Score: 120.94 E-value: 6.69e-34
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Name | Accession | Description | Interval | E-value | |||
FumC | COG0114 | Fumarate hydratase class II [Energy production and conversion]; Fumarate hydratase class II is ... |
49-161 | 3.97e-72 | |||
Fumarate hydratase class II [Energy production and conversion]; Fumarate hydratase class II is part of the Pathway/BioSystem: TCA cycle Pssm-ID: 439884 [Multi-domain] Cd Length: 461 Bit Score: 223.75 E-value: 3.97e-72
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Fumarase_classII | cd01362 | Class II fumarases; This subgroup contains Escherichia coli fumarase C, human mitochondrial ... |
51-161 | 5.63e-72 | |||
Class II fumarases; This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. Pssm-ID: 176465 [Multi-domain] Cd Length: 455 Bit Score: 223.15 E-value: 5.63e-72
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fumC | PRK00485 | fumarate hydratase; Reviewed |
49-161 | 2.61e-70 | |||
fumarate hydratase; Reviewed Pssm-ID: 234779 [Multi-domain] Cd Length: 464 Bit Score: 219.19 E-value: 2.61e-70
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Aspartase_like | cd01596 | aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes; This group contains ... |
51-161 | 3.62e-68 | |||
aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes; This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle. Pssm-ID: 176468 [Multi-domain] Cd Length: 450 Bit Score: 213.05 E-value: 3.62e-68
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PLN00134 | PLN00134 | fumarate hydratase; Provisional |
57-161 | 4.94e-64 | |||
fumarate hydratase; Provisional Pssm-ID: 215069 [Multi-domain] Cd Length: 458 Bit Score: 202.61 E-value: 4.94e-64
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fumC_II | TIGR00979 | fumarate hydratase, class II; Putative fumarases from several species (Mycobacterium ... |
50-162 | 1.25e-63 | |||
fumarate hydratase, class II; Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs. [Energy metabolism, TCA cycle] Pssm-ID: 130052 [Multi-domain] Cd Length: 458 Bit Score: 201.88 E-value: 1.25e-63
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AspA | COG1027 | Aspartate ammonia-lyase [Amino acid transport and metabolism]; |
51-161 | 3.28e-45 | |||
Aspartate ammonia-lyase [Amino acid transport and metabolism]; Pssm-ID: 440650 [Multi-domain] Cd Length: 460 Bit Score: 153.67 E-value: 3.28e-45
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aspA | PRK12273 | aspartate ammonia-lyase; Provisional |
48-161 | 3.70e-45 | |||
aspartate ammonia-lyase; Provisional Pssm-ID: 237031 [Multi-domain] Cd Length: 472 Bit Score: 153.74 E-value: 3.70e-45
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Aspartase | cd01357 | Aspartase; This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), ... |
51-161 | 5.86e-44 | |||
Aspartase; This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Pssm-ID: 176462 [Multi-domain] Cd Length: 450 Bit Score: 150.37 E-value: 5.86e-44
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PRK12425 | PRK12425 | class II fumarate hydratase; |
51-161 | 1.45e-42 | |||
class II fumarate hydratase; Pssm-ID: 171490 [Multi-domain] Cd Length: 464 Bit Score: 146.99 E-value: 1.45e-42
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PRK13353 | PRK13353 | aspartate ammonia-lyase; Provisional |
47-161 | 4.51e-42 | |||
aspartate ammonia-lyase; Provisional Pssm-ID: 183992 [Multi-domain] Cd Length: 473 Bit Score: 145.51 E-value: 4.51e-42
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Lyase_1 | pfam00206 | Lyase; |
58-158 | 6.69e-34 | |||
Lyase; Pssm-ID: 425524 [Multi-domain] Cd Length: 312 Bit Score: 120.94 E-value: 6.69e-34
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PRK14515 | PRK14515 | aspartate ammonia-lyase; Provisional |
47-162 | 3.84e-31 | |||
aspartate ammonia-lyase; Provisional Pssm-ID: 237743 [Multi-domain] Cd Length: 479 Bit Score: 116.64 E-value: 3.84e-31
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Blast search parameters | ||||
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