NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|951551617|ref|XP_014475538|]
View 

PREDICTED: O-glucosyltransferase rumi homolog [Dinoponera quadriceps]

Protein Classification

glycosyltransferase family protein( domain architecture ID 581341)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Glyco_transf_90 super family cl23835
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 75-394 7.86e-111

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


The actual alignment was detected with superfamily member pfam05686:

Pssm-ID: 329112  Cd Length: 396  Bit Score: 330.59  E-value: 7.86e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   75 ECFKY--VILRDLRPFKKKGINEEMINAAKTR-GTFYQLIKGTLYREK-DCMFPSR----CAGIEHFLLKVIANLSDMDL 146
Cdd:pfam05686   5 TCPDYfrWIHEDLEPWRETGITREMVERAKRKaHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRLPDLEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  147 VINTRDYPQ--SSEYFG---NPLPIFSFSKTPQYYDIMYPAWAFWeGGPAIslyprGLGRWDQHRKSLNKANMETPWERK 221
Cdd:pfam05686  85 MFNCGDWPVvkKRDYRGpnaNPPPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  222 ESKGFFRGSRTSSE-RDNLILLSRNKSYLVDAQYTKNqawksNEDTLHREPASVVSLESHCAYKYLFNFRGVAASFRHKH 300
Cdd:pfam05686 159 EPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKY 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  301 LFLCRSLVFHVGDEWTEFYYDAMKPWIHYIPVSRHADQKELEDLITFVIDNDDLAKKIADRGRDFIWNNLRMSDVTYYWK 380
Cdd:pfam05686 234 ILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMF 313

                         330
                  ....*....|....
gi 951551617  381 QLLKSYSKLFEYKP 394
Cdd:pfam05686 314 HLLTEYAKLLKYKP 327
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 75-394 7.86e-111

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 330.59  E-value: 7.86e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   75 ECFKY--VILRDLRPFKKKGINEEMINAAKTR-GTFYQLIKGTLYREK-DCMFPSR----CAGIEHFLLKVIANLSDMDL 146
Cdd:pfam05686   5 TCPDYfrWIHEDLEPWRETGITREMVERAKRKaHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRLPDLEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  147 VINTRDYPQ--SSEYFG---NPLPIFSFSKTPQYYDIMYPAWAFWeGGPAIslyprGLGRWDQHRKSLNKANMETPWERK 221
Cdd:pfam05686  85 MFNCGDWPVvkKRDYRGpnaNPPPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  222 ESKGFFRGSRTSSE-RDNLILLSRNKSYLVDAQYTKNqawksNEDTLHREPASVVSLESHCAYKYLFNFRGVAASFRHKH 300
Cdd:pfam05686 159 EPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKY 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  301 LFLCRSLVFHVGDEWTEFYYDAMKPWIHYIPVSRHADQKELEDLITFVIDNDDLAKKIADRGRDFIWNNLRMSDVTYYWK 380
Cdd:pfam05686 234 ILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMF 313

                         330
                  ....*....|....
gi 951551617  381 QLLKSYSKLFEYKP 394
Cdd:pfam05686 314 HLLTEYAKLLKYKP 327
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
141-393 9.34e-90

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 271.60  E-value: 9.34e-90
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   141 LSDMDLVINTRDYPQ------SSEYFGNPLPIFSFSKTPQYYDIMYPAWAFWEGgpaislYPRGLGR-WDQHRKSLNKAN 213
Cdd:smart00672   2 VPDLELMFNCRDWPLinkksfASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG------WPEVNGRpWDKDLMELEEGN 75

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   214 METPWERKESKGFFRGSRTS-SERDNLILLSRNKSYLVDAQYTKNQAWKSNEDTLHREPASVVSLESHCAYKYLFNFRGV 292
Cdd:smart00672  76 KRTKWSDKNAYAYWRGNPTVaSERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGV 155

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   293 AASFRHKHLFLCRSLVFHVGDEWTEFYYDAMKPWIHYIPVSRHADQKELEDLITFVIDNDDLAKKIADRGRDFIWNNLRM 372
Cdd:smart00672 156 AWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSM 235

                          250       260
                   ....*....|....*....|.
gi 951551617   373 SDVTYYWKQLLKSYSKLFEYK 393
Cdd:smart00672 236 EDVYDYMFHLLQEYAKLLKYK 256
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 75-394 7.86e-111

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 330.59  E-value: 7.86e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   75 ECFKY--VILRDLRPFKKKGINEEMINAAKTR-GTFYQLIKGTLYREK-DCMFPSR----CAGIEHFLLKVIANLSDMDL 146
Cdd:pfam05686   5 TCPDYfrWIHEDLEPWRETGITREMVERAKRKaHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPGRLPDLEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  147 VINTRDYPQ--SSEYFG---NPLPIFSFSKTPQYYDIMYPAWAFWeGGPAIslyprGLGRWDQHRKSLNKANMETPWERK 221
Cdd:pfam05686  85 MFNCGDWPVvkKRDYRGpnaNPPPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  222 ESKGFFRGSRTSSE-RDNLILLSRNKSYLVDAQYTKNqawksNEDTLHREPASVVSLESHCAYKYLFNFRGVAASFRHKH 300
Cdd:pfam05686 159 EPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKY 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617  301 LFLCRSLVFHVGDEWTEFYYDAMKPWIHYIPVSRHADQKELEDLITFVIDNDDLAKKIADRGRDFIWNNLRMSDVTYYWK 380
Cdd:pfam05686 234 ILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMF 313

                         330
                  ....*....|....
gi 951551617  381 QLLKSYSKLFEYKP 394
Cdd:pfam05686 314 HLLTEYAKLLKYKP 327
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
141-393 9.34e-90

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 271.60  E-value: 9.34e-90
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   141 LSDMDLVINTRDYPQ------SSEYFGNPLPIFSFSKTPQYYDIMYPAWAFWEGgpaislYPRGLGR-WDQHRKSLNKAN 213
Cdd:smart00672   2 VPDLELMFNCRDWPLinkksfASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG------WPEVNGRpWDKDLMELEEGN 75

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   214 METPWERKESKGFFRGSRTS-SERDNLILLSRNKSYLVDAQYTKNQAWKSNEDTLHREPASVVSLESHCAYKYLFNFRGV 292
Cdd:smart00672  76 KRTKWSDKNAYAYWRGNPTVaSERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGV 155

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 951551617   293 AASFRHKHLFLCRSLVFHVGDEWTEFYYDAMKPWIHYIPVSRHADQKELEDLITFVIDNDDLAKKIADRGRDFIWNNLRM 372
Cdd:smart00672 156 AWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSM 235

                          250       260
                   ....*....|....*....|.
gi 951551617   373 SDVTYYWKQLLKSYSKLFEYK 393
Cdd:smart00672 236 EDVYDYMFHLLQEYAKLLKYK 256
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH