|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-716 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1007.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTV 80
Cdd:CHL00025 24 LGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTV 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 81 GIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNR 160
Cdd:CHL00025 104 GILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNR 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 161 VGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISAL 240
Cdd:CHL00025 184 VGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISAL 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 241 IHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSAL 320
Cdd:CHL00025 264 IHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAAL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 321 FHLITHAYSKALLFLGSGSVIHSMEALVGYCPKKS******************************************LND 400
Cdd:CHL00025 344 FHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 401 SWLYSLIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNYSGKRNTPLYSISLWGKEGSKISKKNFRLVTllkMKKNA 480
Cdd:CHL00025 424 SWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKINKLLLLLT---MNNNE 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 481 CPSFFSNKVYKMDENAKNMIQPFLSIpnFGNTKTSLYPYESNNTM*********************************** 560
Cdd:CHL00025 501 RVSFFSKKTYKIDGNVRNMIRSFITI--FGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWL 578
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 561 ******************************************************************************** 640
Cdd:CHL00025 579 TPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIINVIYNWSY 658
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 641 ***---******LTAGMRKLAEFTHFFDRRIIDGIPNGVGVMSFFVAEVIKSVGGGRISSYLFFYFSYVSIFLLIYYFL 716
Cdd:CHL00025 659 NRGyidAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGRISSYLFLYLFYVSIFLLILYFF 737
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-433 |
9.18e-180 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 528.44 E-value: 9.18e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTV 80
Cdd:PRK07376 24 LGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTV 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 81 GIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNR 160
Cdd:PRK07376 104 ALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNR 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 161 VGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISAL 240
Cdd:PRK07376 184 VGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISAL 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 241 IHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSAL 320
Cdd:PRK07376 264 IHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 321 FHLITHAYSKALLFLGSGSVIHSMEALVGYCPKKS******************************************LND 400
Cdd:PRK07376 344 FHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGA 423
|
410 420 430
....*....|....*....|....*....|...
gi 948545852 401 SWLYSLIFAIIAWSTAGLTAFYMCRIYLLTFEG 433
Cdd:PRK07376 424 AFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG 456
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-344 |
2.56e-147 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 442.67 E-value: 2.56e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKSLRRMWAFqsvLLLSIVMIFSMNLSIQ---QINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILI 77
Cdd:COG1009 13 LGALLAGLLGRRLGRRAAG---WLAALAPLAAFVLSLLlfpAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 78 TTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFV 157
Cdd:COG1009 90 TGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 158 TNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISnnevnFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPI 237
Cdd:COG1009 170 VTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILS-----SPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 238 SALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR 317
Cdd:COG1009 245 SALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYV 324
|
330 340
....*....|....*....|....*..
gi 948545852 318 SALFHLITHAYSKALLFLGSGSVIHSM 344
Cdd:COG1009 325 AALFHLLTHAFFKALLFLGAGSVIHAT 351
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
24-344 |
9.49e-147 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 441.90 E-value: 9.49e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 24 LLSIVMIFSMNLSIQQinssSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFA 103
Cdd:PRK06590 44 LLSLVVFFDFLLGGGR----AFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 104 YMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFR 183
Cdd:PRK06590 120 YLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 184 DlfqIFNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIV 263
Cdd:PRK06590 200 E---VFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 264 IPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHS 343
Cdd:PRK06590 277 SPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHA 356
|
.
gi 948545852 344 M 344
Cdd:PRK06590 357 M 357
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
23-345 |
7.76e-125 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 384.71 E-value: 7.76e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 23 LLLSIVMIFSMNLSIQQInssSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFF 102
Cdd:TIGR01974 41 AALSAFVFVDFFLNGEGE---AFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 103 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF 182
Cdd:TIGR01974 118 AYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 183 RDLFQIFNNlisnneVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFI 262
Cdd:TIGR01974 198 QEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 263 VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:TIGR01974 272 LSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 351
|
...
gi 948545852 343 SME 345
Cdd:TIGR01974 352 AMH 354
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
23-344 |
6.81e-95 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 306.62 E-value: 6.81e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 23 LLLSIVMIFSMNLSI-----QQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHG 97
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 98 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVT 177
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 178 GSFEFRDLFQIFNNLISNNevnfvfVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 257
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 258 MPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 337
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
....*..
gi 948545852 338 GSVIHSM 344
Cdd:MTH00020 344 GSVIHAL 350
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
40-342 |
1.63e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 305.78 E-value: 1.63e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 40 INSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSS 119
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 120 NLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVn 199
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 200 fvfvTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITV 279
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 948545852 280 FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIH 349
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
40-344 |
5.04e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 257.96 E-value: 5.04e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 40 INSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSS 119
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 120 NLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDL------FQIFNNLI 193
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 194 SNNEVNFV----FVTLcAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMN 269
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 948545852 270 FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSVIHSM 344
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHST 366
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-344 |
5.38e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 253.34 E-value: 5.38e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKSLRRMWAFQSVLLLSIVMIFsmnLSIQQINSSSVYQyvWSWIINNDFSLEFGYLIDPLTSIMSILITTV 80
Cdd:MTH00211 17 LLPLLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSVALYV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 81 GIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNR 160
Cdd:MTH00211 92 TWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 161 VGDFGLLLGILGFYWVTGSFEFRDLFqifnnlisnneVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISAL 240
Cdd:MTH00211 172 IGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 241 IHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSAL 320
Cdd:MTH00211 241 LHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAF 320
|
330 340
....*....|....*....|....
gi 948545852 321 FHLITHAYSKALLFLGSGSVIHSM 344
Cdd:MTH00211 321 LHICTHAFFKAMLFMCSGSIIHGL 344
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
37-342 |
3.91e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 238.28 E-value: 3.91e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 37 IQQINSSSVYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLV 116
Cdd:PRK12647 35 IPEIAAGETVRGGYAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 117 TSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQiFNNLISNN 196
Cdd:PRK12647 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 197 EvnfvFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGI 276
Cdd:PRK12647 192 P----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGG 267
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 277 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDH 336
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
27-344 |
6.63e-66 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 228.89 E-value: 6.63e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 27 IVMIFSMNLSIQQINSSsvyqyvWSWIINNDFSLEFGYLIDPLtSIMSI---LITTVGIMVliYSDNYMSHDHGYLRFFA 103
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 104 YMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFR 183
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 184 DLFqifnnliSNNEVNfvfvTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIV 263
Cdd:MTH00004 200 QLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 264 IPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHS 343
Cdd:MTH00004 269 NQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHN 348
|
.
gi 948545852 344 M 344
Cdd:MTH00004 349 L 349
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
21-343 |
1.90e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 228.32 E-value: 1.90e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 21 SVLLLSIVMIFSMNLSIQQINSSsvyqyVWSWIINNDFSLEFGYLIDpltsIMSILITTVGIMV----LIYSDNYMSHDH 96
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 97 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWV 176
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 177 TGSFEFrdlfqifNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 256
Cdd:MTH00208 216 FNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 257 LMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 336
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
....*..
gi 948545852 337 SGSVIHS 343
Cdd:MTH00208 369 SGSIIHS 375
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-344 |
1.28e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 225.17 E-value: 1.28e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 29 MIFsMNLSIQQINSSsvyqyvWSWIINNDFSLEFGYLIDpltsIMSILITTVGIMV----LIYSDNYMSHDHGYLRFFAY 104
Cdd:MTH00066 50 MIF-INQGLESITTS------FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKY 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 105 MSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRD 184
Cdd:MTH00066 119 LLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQ 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 185 LFQIFNNlisnnevnfvfVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVI 264
Cdd:MTH00066 199 IFLLNDN-----------STLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENN 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 265 PHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSM 344
Cdd:MTH00066 268 QTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL 347
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
22-343 |
1.26e-62 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 223.65 E-value: 1.26e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 22 VLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINndFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL-R 100
Cdd:PRK12645 34 VLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPS--LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgN 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 101 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSF 180
Cdd:PRK12645 112 FYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 181 EFRDLFQIFNnLISNNEvnfvFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPL 260
Cdd:PRK12645 192 SIREMIANAD-EIQNSP----LFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPI 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 261 FIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS----------------YRSALFHLI 324
Cdd:PRK12645 267 FAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLI 346
|
330
....*....|....*....
gi 948545852 325 THAYSKALLFLGSGSVIHS 343
Cdd:PRK12645 347 NHATFKGSLFMIVGIVDHE 365
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
118-345 |
1.59e-62 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 210.63 E-value: 1.59e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 118 SSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNE 197
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 198 VNFVFvtlcaVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLMPLF-IVIPHIMNFISLIG 275
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 948545852 276 IITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHSME 345
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV 227
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
4-343 |
2.43e-62 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 222.80 E-value: 2.43e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 4 LLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIM 83
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGVL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 84 VLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGD 163
Cdd:TIGR00940 91 VVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 164 FGLLLGILGFYWVTGSFEFRDLFQifnnliSNNEV-NFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIH 242
Cdd:TIGR00940 171 LAMLGGLILLGKITGSFSIDAVIA------SADAIrNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLH 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 243 AATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS------- 315
Cdd:TIGR00940 245 SATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqg 324
|
330 340 350
....*....|....*....|....*....|....*..
gi 948545852 316 ---------YRSALFHLITHAYSKALLFLGSGSVIHS 343
Cdd:TIGR00940 325 ddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE 361
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-343 |
6.34e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 223.65 E-value: 6.34e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 48 YVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 126
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 127 FWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFqifnnlisNNEVNFVFVTLC 206
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 207 AVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLA 286
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 287 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSVIHS 343
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS 345
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
23-341 |
1.23e-60 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 214.77 E-value: 1.23e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 23 LLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFF 102
Cdd:PRK07390 44 LLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 103 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF 182
Cdd:PRK07390 124 ALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNF 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 183 RDLFQifnnLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLMPLFI 262
Cdd:PRK07390 204 SDLAA----WAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLA 278
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 263 VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 341
Cdd:PRK07390 279 LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII 357
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-343 |
5.44e-60 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 209.45 E-value: 5.44e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKslRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWiinNDFSLeFGYLIDPLTSIMSILITTV 80
Cdd:PRK06525 14 GALVVFFLPGR--RAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVVLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 81 GIMVLIYSDNYMS-------HDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTrPVAAKACQ 153
Cdd:PRK06525 88 GLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRSAL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 154 KAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqifnNLISNNEVNFVFvtlcAVLLFAgAIAKSAQFPLHVWLPDAMEG 233
Cdd:PRK06525 167 KALLITHIGSLGLYLAAATLFLQTGTFALSAL-----SGLHGSLKYLVF----LGILFA-AWGKSAQLPFYSWLPDAMEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 234 PTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 312
Cdd:PRK06525 237 PTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLS 316
|
330 340 350
....*....|....*....|....*....|....*..
gi 948545852 313 MGSYRS------ALFHLITHAYSKALLFLGSGSVIHS 343
Cdd:PRK06525 317 LAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYS 353
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
91-343 |
5.64e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 212.77 E-value: 5.64e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 91 YMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLllgI 170
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 171 LGFYWVTGSFEFRDLFQIFnnlISNNEVNfvfVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 250
Cdd:MTH00137 188 LAMAWMATNLNSWEIQQIF---ALSKDFD---LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 251 IFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSK 330
Cdd:MTH00137 262 IFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFK 341
|
250
....*....|...
gi 948545852 331 ALLFLGSGSVIHS 343
Cdd:MTH00137 342 AMLFLCSGSIIHS 354
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
17-342 |
1.79e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 216.59 E-value: 1.79e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 17 WAFQSVLLLSIVMIFSMnlsIQQINSSSVYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDH 96
Cdd:PRK12648 30 WLAGLVALAALVLLALL---YPAVAAGEVIRAEIEWL--PALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPAD 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 97 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWV 176
Cdd:PRK12648 105 PVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHI 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 177 TGSFEFRDLFQIfNNLISNNEvnFVFVTLCAVLLfaGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 256
Cdd:PRK12648 185 VGSYDLDVVLAA-GDLIRAHP--LYPPALVLILL--GAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLAR 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 257 LMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALL 333
Cdd:PRK12648 260 LWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAavaAIFHIINHATFKASL 339
|
....*....
gi 948545852 334 FLGSGSVIH 342
Cdd:PRK12648 340 FMAAGIIDH 348
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-342 |
7.03e-58 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 202.30 E-value: 7.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 3 LLLFPTATKSLRRMWAFQSVLLLSIVMIFSMnlsiQQINSSSVYQYVWSwiinnDFSLEFG--YLIDPLTSIMSILITTV 80
Cdd:COG0651 18 LLLLLGRRRRLQRALSLLASLALLALALALL----LQVLAGGPLVYALG-----GWPAPFGivLVADRLSALFLLLTALV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 81 GIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPvAAKACQKAFVTNR 160
Cdd:COG0651 89 ALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRAGLKYLILNL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 161 VGDFGLLLGILGFYWVTGSFEFRDLFQIFnnlisnNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAM-EGPTPISA 239
Cdd:COG0651 168 VGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 240 LIHAAtMVAAGIFLVARLMPLFI---VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 316
Cdd:COG0651 242 LLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTP 320
|
330 340
....*....|....*....|....*....
gi 948545852 317 RS---ALFHLITHAYSKALLFLGSGSVIH 342
Cdd:COG0651 321 LGlagALFHLLNHALAKALLFLAAGAIER 349
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
50-344 |
9.13e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 206.63 E-value: 9.13e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 50 WSWIINNDFSLEFGYLIDpLTSIMSI---LITTVGIMVliYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYI 126
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 127 FWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRdlfQIFnnLISNNEVNFVFVTLc 206
Cdd:MTH00108 143 GWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQ---QIF--MLNPNNSNLPLMGL- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 207 avlLFAgAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLA 286
Cdd:MTH00108 217 ---LLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICA 292
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 948545852 287 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSM 344
Cdd:MTH00108 293 LTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL 350
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
60-342 |
1.71e-57 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 209.30 E-value: 1.71e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 60 LEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLI 139
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 140 GFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQifNNLISNNEVNFVFVTLCAVLLFAGAIAKSA 219
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 220 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYS 299
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 948545852 300 TMSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH 359
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
52-342 |
8.91e-53 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 195.74 E-value: 8.91e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 52 WIINNDFSLEFgyLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWEL 130
Cdd:PRK12646 64 WMKTLDINLDL--RLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 131 VGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLisNNEVNFVFVTLCAVLl 210
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 211 faGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQK 290
Cdd:PRK12646 219 --GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQW 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 291 DIKRGLAYSTMSQLGYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK12646 297 DLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDH 365
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
425-525 |
7.35e-46 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 163.55 E-value: 7.35e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 425 RIYLLTFEGHLNVHFQNYSGKRNTPLYSISLWGKEGSKISKKNFRLVTLLKMKKNACPSFFSNKVYKMDENAKNMIQPFL 504
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100
....*....|....*....|.
gi 948545852 505 SIPNFGNTKTSLYPYESNNTM 525
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTM 101
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
19-344 |
6.73e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 169.55 E-value: 6.73e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 19 FQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGY 98
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 99 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIgFWFTRPVAAKACQKAFVTNRVGDFGLLLGIlGFYWVTG 178
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 179 SFEFrdlfQIFNNLISNNEVNFVFVtlcaVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLM 258
Cdd:MTH00165 163 SWNF----IFYLDFMKNSFEMLLIG----LLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 259 PLFIvIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 338
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
....*.
gi 948545852 339 SVIHSM 344
Cdd:MTH00165 314 SIIHNM 319
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
22-343 |
1.77e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 165.20 E-value: 1.77e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 22 VLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRF 101
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 102 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAkACQKAFVTNRVGDFGLLLGILGFYwvtgsfe 181
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLS-AGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 182 frdLFQIFNNLISNNEVNFVFVTLCAVLLfaGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLF 261
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 262 IVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 341
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
..
gi 948545852 342 HS 343
Cdd:MTH00209 313 HS 314
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
21-343 |
3.63e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 164.63 E-value: 3.63e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 21 SVLLLSIVMIFSMNLSIQQINSSSvyqYVWSWIINNDFSLEFGY--LIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGY 98
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 99 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWftrpVAAKACQKAFVT---NRVGDFGLLLGILGFYw 175
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYY----QNKKSLSAGMLTaltNRIGDVLILLSIALLV- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 176 VTGSFefrdlfqifnNLISNNEVNFVFvtLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 255
Cdd:MTH00151 160 LLGHW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 256 RLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 335
Cdd:MTH00151 228 RFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307
|
....*...
gi 948545852 336 GSGSVIHS 343
Cdd:MTH00151 308 CAGSIIHS 315
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
52-342 |
4.71e-42 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 164.83 E-value: 4.71e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 52 WI---INNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFW 128
Cdd:PRK12650 60 WIpdlLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 129 ELVGICSYLLIGFwfTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqIFNNLISNNEVnfvFVTLCAV 208
Cdd:PRK12650 140 ELVSLASFFLIAR--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI--LHSDVWAEKPG---LTTVVAV 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 209 LLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLF--IVIPHIMNFIslIGIITVFLGATLA 286
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVWNWLLII--VGMITALMGAVFA 290
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 287 LAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK12650 291 VQKTDLKKLTAYSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH 349
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-342 |
1.35e-39 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 152.54 E-value: 1.35e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKSLRRMWAFQS---VLLLSIVMIFSMNlsiqqiNSSSVYQYV--WSWIinNDFSLEFGYLIDPLTSIMSI 75
Cdd:COG1008 18 LLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFD------PGTGGFQFVesYPWI--PSLGISYHLGVDGISLPLVL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 76 LITTVGIMVLIYSDNYMSHDHGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFW--FTRPVAAKacq 153
Cdd:COG1008 90 LTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI--- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 154 KAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNNLISNNEVNFVFVtlcavLLFAGAIAKSAQFPLHVWLPDA-ME 232
Cdd:COG1008 165 KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWLPDAhVE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 233 GPTPISAlIHAATMVAAGIFLVARL-MPLFiviP----HIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM 307
Cdd:COG1008 239 APTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
330 340 350
....*....|....*....|....*....|....*...
gi 948545852 308 MLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIH 342
Cdd:COG1008 315 LLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYD 352
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
3-343 |
1.44e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 154.15 E-value: 1.44e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 3 LLLFPTATKSLRRMWAFqsvlllsIVMIFSMNLSIQQINSSSVYQyvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGI 82
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 83 MVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIgFWFTRPVAAKACQKAFVTNRVG 162
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 163 DFGLLLGIlgfywvtgSFEFRDLFQIFNNLISNNEVNFVfvTLCAVLlfaGAIAKSAQFPLHVWLPDAMEGPTPISALIH 242
Cdd:MTH00207 151 DVMLLLSI--------GWTLNQGHWSITNMWQTDMNNYI--ALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSALVH 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 243 AATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFH 322
Cdd:MTH00207 218 SSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFH 297
|
330 340
....*....|....*....|.
gi 948545852 323 LITHAYSKALLFLGSGSVIHS 343
Cdd:MTH00207 298 LITHALFKALLFVCAGSLIHS 318
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-341 |
3.02e-39 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 152.16 E-value: 3.02e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSvyqyvwSWIINndfslefgyliDPLTSIMSILITTV 80
Cdd:PRK08168 19 GGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV-----------SGLGLVMAALVQLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 81 GIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNR 160
Cdd:PRK08168 82 GWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 161 VGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNnevnfVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISAL 240
Cdd:PRK08168 162 LAELLLLAAAALAYLEVGSLSLSALWAHLAAQGAS-----PSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSAL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 241 IHAAtMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSAL 320
Cdd:PRK08168 237 LHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELAL 315
|
330 340
....*....|....*....|.
gi 948545852 321 FHLITHAYSKALLFLGSGSVI 341
Cdd:PRK08168 316 LHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-340 |
1.99e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 149.26 E-value: 1.99e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 2 GLLLFPTATKSLRRMWAFqSVLLLSIVMIFSMnlsIQQINSSSVYQYV---WSWIInndfSLEFGylIDPLTSIMSILIT 78
Cdd:PRK08375 18 ALIVLLPKRRRLRWALAL-LVAALTFALAISL---LPQVLDGGVIAYVvggWPPGI----GIELR--ADSLSALFLLVTS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 79 TVGIMVLIYSdnYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRpVAAKACQKAFVT 158
Cdd:PRK08375 88 ILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 159 NRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNnlisnnEVNFVFVTLcAVLLFAGAIaKSAQFPLHVWLPDAMEGPTPIS 238
Cdd:PRK08375 165 GLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPLHTWLPRAYPAAPPVV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 239 ALIHAATMVAAGIFLVARLM-----PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 313
Cdd:PRK08375 237 TALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLAL 316
|
330 340 350
....*....|....*....|....*....|
gi 948545852 314 GSYRS---ALFHLITHAYSKALLFLGSGSV 340
Cdd:PRK08375 317 LTPLAlaaGLLHLLHHALMKGALFLAAGAI 346
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-342 |
4.24e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 146.01 E-value: 4.24e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 66 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTR 145
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 146 PVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqifNNLISNNEVNFVFVTLcaVLLFAGAIAKSAQFPLHV 225
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL----AVKMSENPTVVAKIAL--ALFIAGLAMKSGAVPVHM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 226 WLPDAM-EGPTPISALIHAATmvAAGIFLVARLmpLFIVIPHIMN------FISLIGIITVFLGATLALAQKDIKRGLAY 298
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINlatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 299 STMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIY 376
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
64-335 |
3.13e-36 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 142.56 E-value: 3.13e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 64 YLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGICSYLLIGFW 142
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 143 FTRPVAAKACQKAFVTnrvGDFG---LLLGILGFYWVTGSFEFRDLFQIfnnlISNNEVNFVFVTLCAVLLFAGAIAKSA 219
Cdd:COG1007 146 RDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLLGLVLVLAGLAFKLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 220 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLM--PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGL 296
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 948545852 297 AYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFL 335
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA 339
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
64-343 |
6.40e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 139.72 E-value: 6.40e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 64 YLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWF 143
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 144 TRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVNFvFVTLCAVLLFAGAIA------K 217
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGL-AGNPPLALGVALALAlwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 218 SAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLM--------PLFIVIPHIMNFISLIGIITVFLGATLALA 288
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 948545852 289 QKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHS 343
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA 373
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
64-345 |
3.32e-32 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 130.71 E-value: 3.32e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 64 YLIDPLTSIMSILITTVGIMVLIYSDNYMShDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWF 143
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 144 TRPVAAKACQKAFVtnrVGDFG---LLLGILGFYWVTGSFEFRDLFQIFNNLISNNevnfVFVTLCAVLLFAGAIAKSAQ 220
Cdd:PRK05777 148 DRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNS----LLLLFGLVFLLVGLAFKLSA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 221 FPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAY 298
Cdd:PRK05777 221 VPFHMWTPDVYEGaPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 948545852 299 STMSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSVIHSME 345
Cdd:PRK05777 301 SSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLR 346
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
58-344 |
1.12e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 130.04 E-value: 1.12e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 58 FSLEFGYLIDPLtsIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYL 137
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 138 LIGFWFTRPVAAKACQKAFvTNRVGDFGLLLGILGFYWVTGSFEfrdLFQIFNNLISnnevnfvfvtlcaVLLFAGAIAK 217
Cdd:MTH00095 115 LVLFYNNWDSNSGAMNTAL-TNRIGDFFIFLFFSGFIFSSYYFF---SFSFFSSSMI-------------LMLLLTSFTK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 218 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIpHIMNFISLIGIITVFLGATLALAQKDIKRGLA 297
Cdd:MTH00095 178 SAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 948545852 298 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSM 344
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN 303
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
51-342 |
2.41e-30 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 126.65 E-value: 2.41e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 51 SWIINNDFSLEFGYLIdpLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFfsTSMLGLVTSSNLIQIYIFWEL 130
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 131 VGICSYLLIGFWFTRpvAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVNFVFVtlcavLL 210
Cdd:PRK08668 130 MTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFL-----FL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 211 FAGAIAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLMP---LFIVIPHIMN------FISLIGIIT 278
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtkLFSEFGTYRGvplfnyILAWLGNIS 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 948545852 279 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-343 |
4.84e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 121.21 E-value: 4.84e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 65 LIDPLTSIMSILITTVGIMVLIYSdnymsHDHGYLRFFAymsFFSTSMLGLV----TSSNLIQIYIFWELVGICSYLLIG 140
Cdd:PRK07234 64 RADALSGYFILTNALVTLAVIFYC-----WESAKTRFFY---AQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVA 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 141 FWFTRPVAAKACQKAFVTNRVGDFgLLLGILGFYWVTGSFEFRDLFQIFNNLISnnevnfvfvtlcavLLFAGAIAKSAQ 220
Cdd:PRK07234 136 YPRTDRAIWVGLRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATADPEAFA--------------LIALGLLVKGGI 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 221 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHImnfISLIGIITVFLGATLALAQKDIKRGLAYST 300
Cdd:PRK07234 201 FVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFST 277
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 948545852 301 MSQLGYMMLALGMGsyrsALFHLiTHAYSKALLFLGSGsVIHS 343
Cdd:PRK07234 278 ISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPS 314
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
66-341 |
1.73e-28 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 120.14 E-value: 1.73e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 66 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGICSYLLIG--- 140
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 141 FWFTRPVAAKACQKAFVtnrVGDFGLLLGILGFYWVTGSFefrdlfQIFNNLISNNEVNFVFV--TLCAVLLFAGAIAKS 218
Cdd:PRK08601 148 GWKVAREAAKISGMLFL---ISWLALALAIVWLFIATGEW------QLTSVLSNENLAQLGTWekTGINLLLILAVMIPA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 219 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLMPLFI-VIPHIMNFIslIGIITVFLGATLALAQKDIKRGLA 297
Cdd:PRK08601 219 AQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLV 295
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 948545852 298 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 341
Cdd:PRK08601 296 GSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
66-344 |
1.98e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 121.15 E-value: 1.98e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 66 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL--RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWF 143
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKGpgAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 144 TRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDlfqifnnlISNNEVNFVFVTLCAVLLFAGAIAKSAQFPL 223
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLVPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 224 HVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLMPLFIVIPHIMNFISL--IGIITVFLGATLALAQKDIKRGLAYST 300
Cdd:PRK06521 230 HVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWGVLVlaLGAISAVLGVLYALAEHDLKRLLAYST 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 948545852 301 MSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSVIHSM 344
Cdd:PRK06521 309 IENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHAT 366
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
22-335 |
1.21e-27 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 117.23 E-value: 1.21e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 22 VLLLSIVMIFSMNlsiqqiNSSSVYQYVW--SWIINNDFSLEFGylIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGyl 99
Cdd:PRK05846 42 TLLLSLVLWIGFD------SSNAGFQFVEkhPWIPRFGISYHLG--VDGISLLLVVLTALLTPLAVLASWEEIKKRVK-- 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 100 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFW--FTRPVAAkacQKAFVTNRVGDFGLLLGILGFYWV- 176
Cdd:PRK05846 112 FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKNRIYAA---TKFFLYTLLGSLLMLVAIIYLVVVy 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 177 ---TGSFEFRDLFQifnNLISNNEVNFVFVTLcavlLFAGAIaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF- 252
Cdd:PRK05846 189 ynaTGTFDIADLLN---LPLPPGVQYWLFLAF----FIAFAV-KMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYg 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 253 LVARLMPLFIVIPHIMN-FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAY 328
Cdd:PRK05846 261 LLRFSLPLFPDASHEFApIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGL 340
|
....*..
gi 948545852 329 SKALLFL 335
Cdd:PRK05846 341 SSAALFL 347
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-341 |
2.29e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 116.45 E-value: 2.29e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 52 WIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL--RFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 129
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 130 LVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDlfqifNNLISNNEVNFVFvtlcavL 209
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILL------L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 210 LFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIM------NFISLIGIITVFLGA 283
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSS 295
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 948545852 284 TLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSVI 341
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSIY 356
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
2-343 |
2.37e-27 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 117.91 E-value: 2.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 2 GLLLFPTATKSL---RRMWAFQSVL-LLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEfgylIDPLTSIMSILI 77
Cdd:PRK08667 11 LLLLAAAVIPLVfrhKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAFFIILI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 78 TTVGIMVLIYSDNYMSHDHGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQK 154
Cdd:PRK08667 87 GLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 155 AFVTNRVGDFGLLLGILGFYWVTGSFEFrdlfqifnnliSNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG- 233
Cdd:PRK08667 167 YFVMTQLSTVFLMLGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAs 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 234 PTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALG- 312
Cdd:PRK08667 236 PSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGl 315
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 948545852 313 -------------MGSYRSALFHLITHAYSKALLFLGSGSVIHS 343
Cdd:PRK08667 316 yvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHA 359
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
65-341 |
5.70e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 112.33 E-value: 5.70e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 65 LIDPLTSIMSILITTVGIMVLIYSDNYMSH--DHG-----YLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGICSY 136
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHevEHGelspvTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 137 LLIGFWFTRpVAAKACQKAFVTNRVG-DFGLLLGILGFYWVTGSFEFRDLFQIFNNLIS-NNEVNFVFVTLCAVLLFAGA 214
Cdd:PRK06458 146 LLVGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLKhASLLDPTLMKLAFVFLLIGF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 215 IAKSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLMPLFIVIphimnfisliGIITVFL 281
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLLSVLV 294
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 948545852 282 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVI 341
Cdd:PRK06458 295 AAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVL 357
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
22-338 |
4.50e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 106.18 E-value: 4.50e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 22 VLLLSIVMIFSMNLSiqqinsSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYlrF 101
Cdd:TIGR01972 37 TLLLSLLLLFQFDPT------GSGFQFTEDIPWIPALGISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKE--F 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 102 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWfTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGsfe 181
Cdd:TIGR01972 109 YALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG--- 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 182 frDLFQIfnNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLMPL 260
Cdd:TIGR01972 185 --GTFDL--LELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPL 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 261 FiviPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALL 333
Cdd:TIGR01972 261 F---PDASLyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAAL 337
|
....*
gi 948545852 334 FLGSG 338
Cdd:TIGR01972 338 FLLVG 342
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
21-341 |
2.00e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 104.58 E-value: 2.00e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 21 SVLLLSIVMIFSMNLSIQQINSSSVYqyvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLR 100
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVS---LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 101 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTrPVAAKACQKAFVTNRVGDFGLLLgILGFYWVTGSF 180
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 181 EFrdlfqifnnlisnnevnfvfvtLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlMPL 260
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 261 FIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSV 340
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
.
gi 948545852 341 I 341
Cdd:MTH00063 293 M 293
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
114-341 |
4.42e-23 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 103.31 E-value: 4.42e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 114 GLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPvAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNli 193
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 194 snneVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLMPLFIVIPHIMNFIS 272
Cdd:PRK08377 200 ----IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLK 274
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 948545852 273 LI---GIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVI 341
Cdd:PRK08377 275 LViimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVG 349
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
57-342 |
1.16e-22 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 102.67 E-value: 1.16e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 57 DFSLEFgYLIDPLTSIMSILITTVGIMVLIYSdnymSHDHGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGICSY 136
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTST 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 137 LLIgfWFTR-PVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNnlisnnevnfvfvTLCAVLLFAGAI 215
Cdd:PRK12668 131 FLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 216 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIphimnfISLIGIITVFlGATLALAQKDIKRG 295
Cdd:PRK12668 195 VNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIGAAMAVY-GVFFALLENDLRRL 267
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 948545852 296 LAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK12668 268 LSYHIVSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLY 317
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
55-334 |
1.43e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 101.56 E-value: 1.43e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 55 NNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDH-GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGI 133
Cdd:TIGR01770 57 AYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 134 CSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNlISNNEVNFVFvtlcAVLLFAG 213
Cdd:TIGR01770 137 CFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLLL----GIVLILV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 214 AIA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVaRLMPLFIV--IPHIMNFISLIGIITVFLGATLALAQ 289
Cdd:TIGR01770 212 GLLfKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIFAVFL-RLFLYILFgfSEAWQIFLAIIAFLSMLIGNFGALAQ 290
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 948545852 290 KDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLF 334
Cdd:TIGR01770 291 KKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF 338
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-340 |
2.86e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 88.64 E-value: 2.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 14 RRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEfgylIDPLTSIMSILITTVGIMVLIYSdNYMS 93
Cdd:PRK12662 26 RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATMLVLVNFIAVMSVLYG-IYPN 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 94 HD----HGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRpvaaKACQKAF---VTNRVGDFGL 166
Cdd:PRK12662 101 RKeisvNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDK----KALVAAFeylIIGTIGATFY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 167 LLGILGFYWVTGSFEFRDLFQIFNNLISNNEVNfvfvtLCAVLLFAGAIAKSAQFPLHVWLPDAM-EGPTPISALIhAAT 245
Cdd:PRK12662 177 LIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGT 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 246 MVAAGIFLVARLM------PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR-- 317
Cdd:PRK12662 251 STKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYgl 330
|
330 340
....*....|....*....|....
gi 948545852 318 -SALFHLITHAYSKALLFLGSGSV 340
Cdd:PRK12662 331 aAAVAYIVNHSIVKSALFMVSGSI 354
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-342 |
2.21e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 85.77 E-value: 2.21e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 67 DPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRp 146
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 147 VAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVnfvFVTLCAVLLFAGAIAKSAQFPLHVW 226
Cdd:PRK07691 155 IQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 227 LPDAMEGP-TPISALIhAATMVAAGIFLVARLMPLFIviPHIMNF----ISLIGIITVFLGATLALAQKDIKRGLAYSTM 301
Cdd:PRK07691 232 LPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFF--SHDTSFthylILILALLTIIFGVIGAVAYFDIKKIIIYNIM 308
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 948545852 302 SQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK07691 309 IAVGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK 352
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
62-341 |
2.36e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 85.77 E-value: 2.36e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 62 FG--YLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLI 139
Cdd:PRK12663 69 FGiqFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 140 GFWFTRpVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVnfvfVTLCAVLLFAGAIaKSA 219
Cdd:PRK12663 149 TLGQER-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 220 QFPLHvWLPDAMEGPTPISALIHAATMVAAGIFLVARLMP-LFIVIPHIMNF-ISLIGIITVFLGATLALAQKDIKRGLA 297
Cdd:PRK12663 223 LFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAG 301
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 948545852 298 YSTMSQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSVI 341
Cdd:PRK12663 302 YQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLV 348
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-334 |
4.17e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 81.68 E-value: 4.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 1 LGLLLFPTATKSLRRMWAFQSVLLL--SIVMIFSMNLSiqqiNSSSVYQYVWSWIINNDFSLEFGylIDPLtSIMSILIT 78
Cdd:PRK07363 16 IGFFPGNLPSARLRQITLVFAVLVLawSLFLLTQFDLS----DPGMQFQEYLPWNEPLGLSYSLG--VDGL-SLPLLVLN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 79 TVGIMVLIYSDNYMSHDHGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPvAAKACQKAFVT 158
Cdd:PRK07363 89 SLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFLIY 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 159 NRVGDFGLLLGILGFYWVTGSFEFRdlfqiFNNLISNNEVNFVFVTLCAVLLFAGAIaKSAQFPLHVWLPDAMEGPTPIS 238
Cdd:PRK07363 166 TAVSGLLVLAAFLGIVWLSGSTSFD-----YDAISTQNLSLNTQLILLTGLLLGFGI-KIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 239 ALIHAATMVAAGIFLVARL-MPLFiviPHIMNFIS----LIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 313
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
330 340
....*....|....*....|....
gi 948545852 314 GSYRS---ALFHLITHAYSKALLF 334
Cdd:PRK07363 317 GTQLSllgAVAQMISHGLILALLF 340
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
23-340 |
1.42e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 80.13 E-value: 1.42e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 23 LLLSIVMIFSMNLSIQQINSSSVYqyvwSWIINNDFSLEFGylIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYlrfF 102
Cdd:PRK06473 40 LLLSLVLAFQFDPGNPNQQFTEFI----PWIDSLGLSYHLG--VDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFY---Y 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 103 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWfTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF 182
Cdd:PRK06473 111 SLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 183 RdlfqiFNNLISNNEVNFVFVTLCAVLLFAGAIaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-MPL 260
Cdd:PRK06473 190 D-----YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 261 FI-VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLG 336
Cdd:PRK06473 263 FPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFLL 342
|
....
gi 948545852 337 SGSV 340
Cdd:PRK06473 343 VGVV 346
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
104-311 |
6.19e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.12 E-value: 6.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 104 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGICSYLLIGFwftrpvaakaCQKAFVTNRVGDFGLLLG-----IL--GF 173
Cdd:CHL00049 113 FLLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGgasssILvyGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 174 YWVTG-SFEFRDLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGI 251
Cdd:CHL00049 183 SWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAAS 261
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 948545852 252 FLVARLMPlfIVIPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 311
Cdd:CHL00049 262 ALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 323
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
52-102 |
3.43e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 67.07 E-value: 3.43e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 948545852 52 WIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFF 102
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
61-338 |
1.12e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 74.02 E-value: 1.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 61 EFGYLIDPLTSIMSILITTVG-IMVLIYSDNYMSH-------DHGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIF 127
Cdd:PRK08676 55 ESRYLFIDHLGIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIF 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 128 WELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWV-----TGSFEFRDLFQIFNNLISNnevnfvF 202
Cdd:PRK08676 131 AELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgTGTLNWTELAAHASLLSPS------V 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 203 VTLCAVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLMPLFI---VIPHIMNFISLIGIIT 278
Cdd:PRK08676 205 LGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFS 283
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 948545852 279 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSG 338
Cdd:PRK08676 284 IAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG 346
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
167-338 |
2.95e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.69 E-value: 2.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 167 LLGILGFYWVTGSFEFRDLFQIFNNLISNnevnfVFVTLCAVLLFAGAIaKSAQFPLHVWLPDAM-EGPTPISAlIHAAT 245
Cdd:PRK12665 178 LIGIALVYAATGTLNMADLAVRLDELPSG-----TRTALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 246 MVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFH 322
Cdd:PRK12665 251 LTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYY 330
|
170
....*....|....*.
gi 948545852 323 LITHAYSKALLFLGSG 338
Cdd:PRK12665 331 VAHHITVQTTLFLVVG 346
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
20-324 |
1.10e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 70.82 E-value: 1.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 20 QSVLLLSIVMIFSMNLsIQQINSSSVYQYVWSWIINNDFSLEFGYLIdpltsIMSILITTVGIMVLIYSDNYMSHDHGYL 99
Cdd:MTH00199 24 LSTLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 100 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGS 179
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 180 FEFRDlfqifNNLISNNEVNFVFVTLCavLLFagaiaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarlm 258
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 948545852 259 PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLI 324
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLI 303
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
66-342 |
2.29e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 70.24 E-value: 2.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 66 IDPLTSIMSILITTVGIMVLIYsdNYMSHDHGYLRFF-AYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGfwft 144
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLF--NIDWHRHAQVKANgLLINLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG---- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 145 rpvAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVNFVFVTlcAVLLFAGAIaksaqfPLH 224
Cdd:PRK08042 132 ---NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVI--GFGLLAGII------PLH 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 225 VWLPDAMEGPTPISALIHAATMVAAGIF--LVARLM----PLFIVIphimnFISLIGIITVFLGATLALAQKDIKRGLAY 298
Cdd:PRK08042 201 GWVPQAHANASAPAAALFSTVVMKIGLLgiLTLSLLggnaPLWWGV-----ALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 948545852 299 STMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSVIH 342
Cdd:PRK08042 276 HTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWF 333
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
104-326 |
1.00e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 67.77 E-value: 1.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 104 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSF 180
Cdd:PRK02504 112 FAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 181 EfrDLFQIFNNLISNNEVNFVfvtLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLM- 258
Cdd:PRK02504 192 T--QLSAIALALITSPSLGLA---LALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLv 265
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 948545852 259 ---PLFIVIPHIMnfISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITH 326
Cdd:PRK02504 266 tafPSFDEQWKLL--FTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY 337
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
111-318 |
3.17e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 65.44 E-value: 3.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 111 SMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRdlfqiFN 190
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 191 NLISNNEVNF--VFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarlmpLFIVIPHI 267
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 948545852 268 MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS 318
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFES 202
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
64-340 |
4.11e-11 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 65.82 E-value: 4.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 64 YLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGICSyllIGFWF 143
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 144 TRPV--AAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqifNNLISNNEVNFVFVTLCAVLLFaGAIAKSAQF 221
Cdd:PRK06277 142 ASGTeeAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGLP 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 222 PLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLMPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLA 297
Cdd:PRK06277 217 PFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLA 295
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 948545852 298 YSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSV 340
Cdd:PRK06277 296 YHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV 341
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
101-339 |
5.34e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 65.44 E-value: 5.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 101 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGI-LGFYWVTGS 179
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLaLALSGDTFT 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 180 FEFRDLfqifnnliSNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV---- 254
Cdd:PRK12561 169 FDLAEL--------GAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggy 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 255 --------------ARLMPLFIVIphimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-- 318
Cdd:PRK12561 234 alirfnvqmlpdahVYFAPALAIL----------GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlg 301
|
250 260
....*....|....*....|....
gi 948545852 319 ---ALFHLITHAYSKALLFLGSGS 339
Cdd:PRK12561 302 isgAMLQMISHGLIAAALFFLTGV 325
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-336 |
6.31e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 62.00 E-value: 6.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 51 SWIINNDFSLEFGYLIDPL--TSIMSILITTVGIMVLIYSdNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFW 128
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVdgVSLFFILLTTLLIPICILI-SWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 129 ELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSfefRDLFQIFNNLISNNEVNFVFVTlcav 208
Cdd:MTH00204 142 EGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGT---TDYQILLNIKLPLSIQKWLLVG---- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 209 lLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMN-FISLIGIITVFLGATLA 286
Cdd:MTH00204 215 -FFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTT 293
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 948545852 287 LAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLG 336
Cdd:MTH00204 294 CRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIA 346
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
71-340 |
1.27e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 61.34 E-value: 1.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 71 SIMSILITTVGIMVLIYSDNYmSHDHGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWftrpvaAK 150
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 151 ACQKAFVTNRVGDFGLLLGILGFYWVtgsfefrdlfqifnnLISNNEVNFVFVTLCAVLLFA--GAIAKSAQFPLHV--W 226
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWA---------------FIISGTTNFSYLPSPVPLILAsfGFIIKMGMMPFLVseW 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 227 LPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIP--HIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQL 304
Cdd:PRK06459 183 LPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENN 262
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 948545852 305 GYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSV 340
Cdd:PRK06459 263 GAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
125-334 |
2.03e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 60.49 E-value: 2.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 125 YIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGI-LGFYWVTGSFEFRDLfqifnnliSNNEVNFVFV 203
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPTFDMTAL--------AAKDFGLGFQ 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 204 TLC-AVLLFAGAIaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV------------------ARLMPLFIVI 264
Cdd:PRK02546 213 LLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnagmlpdahAQFAPLLIVL 285
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 948545852 265 phimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLF 334
Cdd:PRK02546 286 ----------GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLF 348
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
120-335 |
2.41e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 60.32 E-value: 2.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 120 NLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIfNNLISNNEVN 199
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 200 FVFVTlcavlLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLMPLF-IVIPHIMNFISLIGII 277
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 948545852 278 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFL 335
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI 366
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
112-330 |
1.39e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 54.67 E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 112 MLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqiFNN 191
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQAL---CCL 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 192 LISNNEVNFVFvtlcaVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLMPLF-IVIPHIMN 269
Cdd:MTH00217 199 KIEKELQYFIF-----LGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSP 273
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 270 FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG------------------YMMLALGMGSyrSALFHLITHAYSK 330
Cdd:MTH00217 274 LIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvtlgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
23-334 |
1.44e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 54.36 E-value: 1.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 23 LLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYL-IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRF 101
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 102 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFE 181
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 182 FrdlfqifnnLISNNEVNFVFVT-LCAVLLFAGAIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------ 253
Cdd:MTH00014 173 M---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggyg 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 254 VARLMPLFIVIPHIM-NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYS 329
Cdd:MTH00014 237 LLRMSSLFMHINKSLsAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLC 316
|
....*
gi 948545852 330 KALLF 334
Cdd:MTH00014 317 SSALF 321
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
64-309 |
2.49e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 53.63 E-value: 2.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 64 YLIDPLTSIMSILITTVGIMVLIYSDN--------YMSHDHGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICS 135
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 136 YLLIgfwfTRPVAAKACQKAFVTNRVGDFG--LLLGILGFYW-VTGSFEFRDLFQIFNNlisnnEVNFVFVTLCAVLLFA 212
Cdd:PRK06591 152 YVLI----ASGNNPKSLIGAFDYLIMGSIGatLILIAIGFLLsITGSLNMTDIAAYLQE-----HTNSRIITIAIGFFLI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 213 GAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHI----MNFISLIGIITVFLGATLALA 288
Cdd:PRK06591 223 GAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTNFIRPIALATLIIAPYFAYQ 302
|
250 260
....*....|....*....|.
gi 948545852 289 QKDIKRGLAYSTMSQLGYMML 309
Cdd:PRK06591 303 AKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
217-345 |
9.11e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 52.17 E-value: 9.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 217 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLMPLFIVIPhimnfislIGIITVFLGATLALAQKDIKRG 295
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVITSKLLLS--------VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 948545852 296 LAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSVIHSME 345
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLE 432
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
113-338 |
1.93e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 47.63 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 113 LGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTnRVGDFGLLLGIL--GFYwvtGSFEFRDLFQIFN 190
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY---GSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 191 NLISNNEVNFVFVTlcaVLLFAGAIaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFL------VARL-MPLFi 262
Cdd:CHL00011 202 NQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRInMELL- 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 263 viPHIMNFIS----LIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALL 333
Cdd:CHL00011 270 --PHAHSIFSpwlvIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAAL 345
|
....*
gi 948545852 334 FLGSG 338
Cdd:CHL00011 346 FFLAG 350
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-335 |
3.58e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 47.15 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 67 DPLTSIMSILITTVGIMVLIYSdnyMSHDHGYLRFF-AYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSY--LLIGFWF 143
Cdd:PRK12666 79 DRLSALMLLLTALLALAALLYA---LAGWDRAGPHFhALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYglLLHGSGR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 144 TRpvaAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVnfVFVTLCAVLLFAGAIaKSAQFPL 223
Cdd:PRK12666 156 AR---VRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRA--LLEAGAALLLVVFLI-KAAMWPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 224 HVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLMPLF--------------IVIPhimnfislIGIITVFLGATLALA 288
Cdd:PRK12666 230 NFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagfgqdWLLP--------GGLATLAFGAIGVLA 299
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 948545852 289 QKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL 335
Cdd:PRK12666 300 AQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFL 349
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
21-307 |
1.34e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 44.97 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 21 SVLLLSIVMIFSMNLSIQqINSSSVYQYVWSWIINNDFSLEFGYL-----IDPLTSIMSILITTVGIMVLIYSDNYMS-H 94
Cdd:MTH00044 10 GIAITSWIVPKNKLWPIS-ISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASINHLSnN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 95 DHGYLRFFAYMSFFSTSMLGLVTSS-NLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGF 173
Cdd:MTH00044 89 SPNNQRTFISLIIIILTALIITFSSlELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 174 YWVTGSfefrdLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 252
Cdd:MTH00044 169 YSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 253 LVARLMPLFIVIphIMNFISLIGIITVFLGATLA----LAQKDIKRGLAYSTMSQLGYM 307
Cdd:MTH00044 243 GLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLV 299
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
204-313 |
1.49e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 44.43 E-value: 1.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 204 TLCAVLLFAGAIaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlmpLFIVIPHI-MNFISLIGIITVFLG 282
Cdd:MTH00112 93 TSCTLLTLALAM-KLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIG 165
|
90 100 110
....*....|....*....|....*....|.
gi 948545852 283 ATLALAQKDIKRGLAYSTMSQLGYMMLALGM 313
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITY 196
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
199-316 |
3.84e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 43.34 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 199 NFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFIVIPHIMnfisLIGIIT 278
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110
....*....|....*....|....*....|....*...
gi 948545852 279 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 316
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSW 192
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
65-335 |
5.37e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 42.98 E-value: 5.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 65 LIDPLTSIMSILITTVGIMVLIYSDNYMSHD-HGYLRFFAYMSFF-STSMLGLVTSSNLIQIYIFWELVGICSYLLIGFW 142
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKNEpINRQRTYISMLIIlQLTLILAFSATELILFYIFFEATLIPTLIIITRW 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 143 FTRPVAAKACQK-AFVTnRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNNLISNNEVNFVFVTLCaVLLFagaIAKSAQF 221
Cdd:MTH00068 137 GNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAF---MVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 222 PLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLMPLF--IVIPHIMNFI--SLIGIItvfLGATLALAQK 290
Cdd:MTH00068 211 GLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLtpLSKELSYPFIilALWGVL---MTSLICLRQT 280
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 948545852 291 DIKRGLAYSTMSQLG------------------YMMLALGMGSyrSALFHLITHAY----SKALLFL 335
Cdd:MTH00068 281 DLKSLIAYSSVSHMGlviaaaliqtpwsfsgaiILMISHGLTS--SALFCLANTNYerthSRTLLLL 345
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
19-330 |
8.27e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 42.45 E-value: 8.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 19 FQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGY 98
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 99 LRFFAYMSFFSTSMLGLV-TSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVT 177
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 178 GSFefrdlfqiFNNLISNNEVNFVFVTLCAVLLFagaIAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFLVAR 256
Cdd:MTH00163 166 GSL--------SFFLLNFFGSLNFLWYLSMILAF---LVKMPMFFVHLWLPKAhVEAPVSGS-MILAGVLLKLGGYGLLR 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 257 LMPLFIVIPHIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYS-------------TMSQLGY-----MMLALGMGSyr 317
Cdd:MTH00163 234 VMSFFSKLGLKFNYIwISISLVGGVIVSLICLRQVDLKSLIAYSsvahmglvlgglmTFSYWGLmgsllMMIGHGLCS-- 311
|
330
....*....|...
gi 948545852 318 SALFHLITHAYSK 330
Cdd:MTH00163 312 SGLFCLANIIYER 324
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
46-334 |
1.03e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 42.13 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 46 YQYVWSWIINNDFslefgYLIDPLTSIMSILITTVGIMVLIYSdNYMshdhgyLRFFAYMSFFSTSMLGLV-------TS 118
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-QKS------VKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 119 SNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrdlfqIFNNLISNNEV 198
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 199 NFVFVTLCAVLLFagaIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLMPLFIVIPhiMNFI 271
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS--SSFS 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 948545852 272 SLIGIITV---FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLF 334
Cdd:MTH00150 218 IFLISLSLwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF 286
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
66-334 |
1.18e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 41.85 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 66 IDPLTSIMSILITTVGIMVLIYSDNYMsHDHGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGICSYLLIGFW 142
Cdd:MTH00206 57 YDPLSSPLVILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 143 FTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNNLISNNEVNFVFVTLcavllfaGAIAKSAQFP 222
Cdd:MTH00206 136 GNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYG 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 223 LHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLMPLFIVIPHIMN----FISLIGIITVFLGATLALAQKDIKR 294
Cdd:MTH00206 208 VHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKlssyFFIILGLWGSIMTSSICLRQTDLKS 280
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 948545852 295 GLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLF 334
Cdd:MTH00206 281 LIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLVSSALF 323
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
59-334 |
1.58e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 41.50 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 59 SLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLL 138
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 139 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNevnfvfvTLCAVLLFAgAIAKS 218
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLA-FLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 219 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-MPLFIVIPHIMNFISLIGIITVFLGATLALAQK 290
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQV 272
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 948545852 291 DIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLF 334
Cdd:MTH00205 273 DLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLCSSGMF 319
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
198-343 |
4.16e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 40.48 E-value: 4.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948545852 198 VNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLMPLFIVIPHIMnfISLIGII 277
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFFSGEEI--LLFLGII 210
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 948545852 278 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSVIHS 343
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINR 281
|
|
| |
