|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 688.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 12 FKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 92 FICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 172 DNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLTLLTLIKPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 252 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPINQILFWIMTS 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 944541642 332 IIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-365 |
6.08e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 355.25 E-value: 6.08e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 10 PIFKIVNNaLIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGAS 89
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 90 IFFICLYLHVGRGLYYGSFNY--HYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWG 167
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 168 GFAVDNATLTRFFTFH-FILPFIVSAMVLIHLLFLHQTGSNNPLG----TNSNIDKIPFHPYFSLKDIFGMMLMLTMLTL 242
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 243 LTLIKPylLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:COG1290 258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPveDPYILTGQMLTVMYFSYYLI 365
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
6.29e-90 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 269.24 E-value: 6.29e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 10 PIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 90 IFFICLYLHVGRGLYYGSFN--YHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 944541642 168 GFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
5.35e-81 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 246.14 E-value: 5.35e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 19 LIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIFFICLYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 99 VGRGLYYGSFNYHY--TWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 944541642 177 TRFFTFHFILPFIVSAMVLIHLLFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-345 |
2.30e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 58.66 E-value: 2.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 259 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMP-LYNKNNFRSLQFYPINQILFWIMTSIIIMLT 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPfIENVNKFQNPFRRPVATTVFLFGTVVALWLG 144
|
....*...
gi 944541642 338 WIGARPVE 345
Cdd:TIGR01156 145 IGATLPID 152
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 688.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 12 FKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 92 FICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 172 DNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLTLLTLIKPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 252 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPINQILFWIMTS 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 944541642 332 IIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 619.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 1 MTKPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLM 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 81 RTIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGIN 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 161 LVQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTML 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 241 TLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITPIIHKWWDNLL 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 614.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 1 MTKPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLM 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 81 RTIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGIN 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 161 LVQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTML 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 241 TLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLI-TPIIHKWWDNLLN 378
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLIlFPLLGALENKMLN 379
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 603.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 1 MTKPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLM 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 81 RTIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGIN 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 161 LVQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTML 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 241 TLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITPIIHKWWDNLL 377
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLL 377
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 602.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 5 LRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 85 ANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 165 VWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLTLLT 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 245 LIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPINQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 944541642 325 LFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITPIIHKWWDN 375
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLEN 374
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 602.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 1 MTkPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLM 80
Cdd:MTH00100 1 MT-NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWII 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 81 RTIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGIN 160
Cdd:MTH00100 80 RYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 161 LVQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTML 240
Cdd:MTH00100 160 LVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 241 TLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:MTH00100 240 MLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRP 319
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLI 365
Cdd:MTH00100 320 LSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 601.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 1 MTKPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLM 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 81 RTIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGIN 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 161 LVQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTML 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 241 TLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITPIIHKWWDNLL 377
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKL 377
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 594.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 5 LRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 85 ANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 165 VWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLTLLT 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 245 LIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPINQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 944541642 325 LFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLI 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 557.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 2 TKPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMR 81
Cdd:MTH00034 1 TGPLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 82 TIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINL 161
Cdd:MTH00034 81 NIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 162 VQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLT 241
Cdd:MTH00034 161 VQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 242 LLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPI 321
Cdd:MTH00034 241 SLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPL 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 944541642 322 NQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLI 365
Cdd:MTH00034 321 SQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 520.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 1 MTKPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLM 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 81 RTIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGIN 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 161 LVQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTML 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 241 TLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITPIIHKWWDNLLN 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-378 |
1.50e-175 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 493.45 E-value: 1.50e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 4 PLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTI 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 84 HANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 164 WVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLTLL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 244 TLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPINQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 944541642 324 ILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLI-TPIIHKWWDNLLN 378
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVlIPLLGELENQLLF 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-377 |
1.83e-175 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 493.45 E-value: 1.83e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 1 MTKPLRLTHPIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLM 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 81 RTIHANGASIFFICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGIN 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 161 LVQWVWGGFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTML 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 241 TLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPVEDPYILTGQMLTVMYFSYYLITPIIHKWWDNLL 377
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKL 377
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-377 |
2.23e-135 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 391.61 E-value: 2.23e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 17 NALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIFFICLY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 97 LHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAVDNATL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 177 TRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGmMLMLTMLTLLTLIKPY---LLGD 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILG-FLILFGVFVIIGIEPRietLLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 254 PDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPINQILFWIMTSII 333
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 944541642 334 IMLTWIGARPV-EDPYILTGQMLTVMYFSYYLITPIIHKWWDNLL 377
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLF 376
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
2.64e-126 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 367.73 E-value: 2.64e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 13 KIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 93 ICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 173 NATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGmMLMLTMLTLLTLIKPYLLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 253 DPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYnkNNFRSLqFYPINQILFWIMTSI 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV--NNYTSC-LNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 944541642 333 IIMLTWIGARPVEDPYILTGQMLTVMYFSYYLI 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-365 |
6.08e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 355.25 E-value: 6.08e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 10 PIFKIVNNaLIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGAS 89
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 90 IFFICLYLHVGRGLYYGSFNY--HYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWG 167
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 168 GFAVDNATLTRFFTFH-FILPFIVSAMVLIHLLFLHQTGSNNPLG----TNSNIDKIPFHPYFSLKDIFGMMLMLTMLTL 242
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 243 LTLIKPylLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYP 320
Cdd:COG1290 258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 944541642 321 INQILFWIMTSIIIMLTWIGARPveDPYILTGQMLTVMYFSYYLI 365
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
6.29e-90 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 269.24 E-value: 6.29e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 10 PIFKIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 90 IFFICLYLHVGRGLYYGSFN--YHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 944541642 168 GFAVDNATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-358 |
6.25e-84 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 259.53 E-value: 6.25e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 13 KIVNNALIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIFF 92
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 93 ICLYLHVGRGLYYGSFNYHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAVD 172
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 173 NATLTRFFTFHFILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNI-DKIPFHPYFSLKDIFGMMLMLTMLTLLTLIKPYLL 251
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 252 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIaLVLSIAILMIMPLYNKNNFRSLqfypINQILFWIMTS 331
Cdd:MTH00046 243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVS 317
|
330 340
....*....|....*....|....*..
gi 944541642 332 IIIMLTWIGARPVEDPYILTGQMLTVM 358
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
5.35e-81 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 246.14 E-value: 5.35e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 19 LIDLPTPSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIFFICLYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 99 VGRGLYYGSFNYHY--TWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 944541642 177 TRFFTFHFILPFIVSAMVLIHLLFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
5.21e-48 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 159.73 E-value: 5.21e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 208 NPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLTLLTLIKPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 944541642 288 KLGGVIALVLSIAILMIMPLYNKNNFRSlQFYPINQILFWIMTSIIIMLTWIGARPVEDPYILTGQM 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
4.48e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 152.78 E-value: 4.48e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 89 SIFFICLYLHVGRGLYYGSFNY--HYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 167 GGFAVDNATLTRFFTFHF-ILPFIVSAMVLIHLLFLHQTGSNNPLGTNSNIDKIPFHPYFSLKDIFGMMLMLTMLTLLTL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 944541642 246 IKPYLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
1.11e-40 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 139.15 E-value: 1.11e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 259 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMPLYNKNNFRSLQFYPINQILFWIMTSIIIMLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 944541642 339 IGARPVEDPYILTGQMLTVMY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
1.80e-37 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 134.84 E-value: 1.80e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 34 FGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIFFICLYLHVGRGLYYGSFN--YH 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKkpRE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 112 YTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAVDNATLTRFFTFH-FILPFIV 190
Cdd:PRK03735 124 LNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 944541642 191 SAMVLIHLLFLHQTGSNNPL 210
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
6.66e-34 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 125.22 E-value: 6.66e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 25 PSNISAWWNFGSLLGVCLMTQILTGLFLAMHYTAHIDLAFSSITHICRDVNYGWLMRTIHANGASIFFICLYLHVGRGLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 105 YGSFN--YHYTWMTGVIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGINLVQWVWGGFAVDNATLTRFFTF 182
Cdd:CHL00070 107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 944541642 183 H-FILPFIVSAMVLIHLLFLHQTGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
248-341 |
2.00e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 61.56 E-value: 2.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 248 PYLLGDPdnfipANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMP-LYNKNNFRSLQFYPINQILF 326
Cdd:CHL00058 59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPfLENVNKFQNPFRRPVATTVF 133
|
90
....*....|....*
gi 944541642 327 WIMTSIIIMLTwIGA 341
Cdd:CHL00058 134 LIGTAVALWLG-IGA 147
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
259-350 |
1.23e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 59.42 E-value: 1.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 259 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMP-LYNKNNFRSLQFYPINQILFWIMTSIIIMLT 337
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPfIENVNKFQNPFRRPVATAVFLFGTLVTLWLG 145
|
90
....*....|...
gi 944541642 338 WIGARPVEDPYIL 350
Cdd:COG5679 146 IGAALPIDKSLTL 158
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-345 |
2.30e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 58.66 E-value: 2.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 944541642 259 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMIMP-LYNKNNFRSLQFYPINQILFWIMTSIIIMLT 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPfIENVNKFQNPFRRPVATTVFLFGTVVALWLG 144
|
....*...
gi 944541642 338 WIGARPVE 345
Cdd:TIGR01156 145 IGATLPID 152
|
|
|