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Conserved domains on  [gi|943490854|dbj|BAT23340|]
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glycosyl transferase [Klebsiella sp. Mich. 61]

Protein Classification

glycosyltransferase family protein( domain architecture ID 27718)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_tranf_GTA_type super family cl11394
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
 8-269 5.52e-52

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


The actual alignment was detected with superfamily member PRK10018:

Pssm-ID: 472172 [Multi-domain]  Cd Length: 279  Bit Score: 172.10  E-value: 5.52e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   8 EKPLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSS--DNTADYLVDLasRDHRVKFIRNNEPKGACFSRNRC 85
Cdd:PRK10018   3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTswEQLQQYVTAL--NDPRITYIHNDINSGACAVRNQA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  86 IELAKGEFITGLDDDDEFVENRLQLFMesfqSHGWNIISsnRVFRGNNgDYI--GEVY----------EGIVTKEMLGSR 153
Cdd:PRK10018  81 IMLAQGEYITGIDDDDEWTPNRLSVFL----AHKQQLVT--HAFLYAN-DYVcqGEVYsqpaslplypKSPYSRRLFYKR 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854 154 NIIGNQVFTKTKYFIEVgGFDTSFPAWQDYDMWFRVVQKFGPSHRISNASYIFYVDEDRPRITTGSRAYHGYQLFIEKHK 233
Cdd:PRK10018 154 NIIGNQVFTWAWRFKEC-LFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHK 232

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 943490854 234 NELSSKQLNSLFFQDLLNRNQKIKLKYVIDYFTLTN 269
Cdd:PRK10018 233 DKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRN 268
 
Name Accession Description Interval E-value
PRK10018 PRK10018
colanic acid biosynthesis glycosyltransferase WcaA;
8-269 5.52e-52

colanic acid biosynthesis glycosyltransferase WcaA;


Pssm-ID: 182197 [Multi-domain]  Cd Length: 279  Bit Score: 172.10  E-value: 5.52e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   8 EKPLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSS--DNTADYLVDLasRDHRVKFIRNNEPKGACFSRNRC 85
Cdd:PRK10018   3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTswEQLQQYVTAL--NDPRITYIHNDINSGACAVRNQA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  86 IELAKGEFITGLDDDDEFVENRLQLFMesfqSHGWNIISsnRVFRGNNgDYI--GEVY----------EGIVTKEMLGSR 153
Cdd:PRK10018  81 IMLAQGEYITGIDDDDEWTPNRLSVFL----AHKQQLVT--HAFLYAN-DYVcqGEVYsqpaslplypKSPYSRRLFYKR 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854 154 NIIGNQVFTKTKYFIEVgGFDTSFPAWQDYDMWFRVVQKFGPSHRISNASYIFYVDEDRPRITTGSRAYHGYQLFIEKHK 233
Cdd:PRK10018 154 NIIGNQVFTWAWRFKEC-LFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHK 232

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 943490854 234 NELSSKQLNSLFFQDLLNRNQKIKLKYVIDYFTLTN 269
Cdd:PRK10018 233 DKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRN 268
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 9-192 5.69e-37

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 130.98  E-value: 5.69e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   9 KPLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIEL 88
Cdd:COG0463    1 MPLVSVVIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKDPRIRVIRLERNRGKGAARNAGLAA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  89 AKGEFITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRGNNGDYIGEVYEGIVTKEMLG--SRNIIGNQVFTKTky 166
Cdd:COG0463   81 ARGDYIAFLDADDQLDPEKLEELVAALEEGPADLVYGSRLIREGESDLRRLGSRLFNLVRLLTnlPDSTSGFRLFRRE-- 158

                        170       180
                 ....*....|....*....|....*.
gi 943490854 167 FIEVGGFDTSFpaWQDYDMwFRVVQK 192
Cdd:COG0463  159 VLEELGFDEGF--LEDTEL-LRALRH 181
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
 14-199 5.46e-33

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 118.76  E-value: 5.46e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIELAKGEF 93
Cdd:cd00761    1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAARGEY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  94 ITGLDDDDEFVENRLQLFMESFQSHgwniissnrvfrgNNGDYIGevyegivtkemlgsrnIIGNQVFtKTKYFIEVGGF 173
Cdd:cd00761   81 ILFLDADDLLLPDWLERLVAELLAD-------------PEADAVG----------------GPGNLLF-RRELLEEIGGF 130

                        170       180
                 ....*....|....*....|....*.
gi 943490854 174 DTSFPAWQDYDMWFRVVQKFGPSHRI 199
Cdd:cd00761  131 DEALLSGEEDDDFLLRLLRGGKVAFR 156
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
 13-135 1.65e-30

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 112.49  E-value: 1.65e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   13 TVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIELAKGE 92
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKDPRVRVIRLPENRGKAGARNAGLRAATGD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 943490854   93 FITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRGNNGD 135
Cdd:pfam00535  81 YIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETG 123
EPS_HpsE NF038302
hormogonium polysaccharide biosynthesis glycosyltransferase HpsE;
12-100 6.75e-10

hormogonium polysaccharide biosynthesis glycosyltransferase HpsE;


Pssm-ID: 439602 [Multi-domain]  Cd Length: 307  Bit Score: 58.65  E-value: 6.75e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  12 ITVYIPTHNRSILLKRAVDSVLRQTY-ENF--EIIICDDGSSDNTADYLVDLA---SRDHRVKFIRnnEPK-GACFSRNR 84
Cdd:NF038302   3 FTVAIPTYNGANRLPEVLERLRSQIGtESLswEIIVVDNNSTDNTAQVVQEYQknwPSPYPLRYCF--EPQqGAAFARQR 80

                         90
                 ....*....|....*.
gi 943490854  85 CIELAKGEFITGLDDD 100
Cdd:NF038302  81 AIQEAKGELIGFLDDD 96
 
Name Accession Description Interval E-value
PRK10018 PRK10018
colanic acid biosynthesis glycosyltransferase WcaA;
8-269 5.52e-52

colanic acid biosynthesis glycosyltransferase WcaA;


Pssm-ID: 182197 [Multi-domain]  Cd Length: 279  Bit Score: 172.10  E-value: 5.52e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   8 EKPLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSS--DNTADYLVDLasRDHRVKFIRNNEPKGACFSRNRC 85
Cdd:PRK10018   3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTswEQLQQYVTAL--NDPRITYIHNDINSGACAVRNQA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  86 IELAKGEFITGLDDDDEFVENRLQLFMesfqSHGWNIISsnRVFRGNNgDYI--GEVY----------EGIVTKEMLGSR 153
Cdd:PRK10018  81 IMLAQGEYITGIDDDDEWTPNRLSVFL----AHKQQLVT--HAFLYAN-DYVcqGEVYsqpaslplypKSPYSRRLFYKR 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854 154 NIIGNQVFTKTKYFIEVgGFDTSFPAWQDYDMWFRVVQKFGPSHRISNASYIFYVDEDRPRITTGSRAYHGYQLFIEKHK 233
Cdd:PRK10018 154 NIIGNQVFTWAWRFKEC-LFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHK 232

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 943490854 234 NELSSKQLNSLFFQDLLNRNQKIKLKYVIDYFTLTN 269
Cdd:PRK10018 233 DKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRN 268
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 9-192 5.69e-37

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 130.98  E-value: 5.69e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   9 KPLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIEL 88
Cdd:COG0463    1 MPLVSVVIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKDPRIRVIRLERNRGKGAARNAGLAA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  89 AKGEFITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRGNNGDYIGEVYEGIVTKEMLG--SRNIIGNQVFTKTky 166
Cdd:COG0463   81 ARGDYIAFLDADDQLDPEKLEELVAALEEGPADLVYGSRLIREGESDLRRLGSRLFNLVRLLTnlPDSTSGFRLFRRE-- 158

                        170       180
                 ....*....|....*....|....*.
gi 943490854 167 FIEVGGFDTSFpaWQDYDMwFRVVQK 192
Cdd:COG0463  159 VLEELGFDEGF--LEDTEL-LRALRH 181
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
 14-199 5.46e-33

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 118.76  E-value: 5.46e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIELAKGEF 93
Cdd:cd00761    1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAARGEY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  94 ITGLDDDDEFVENRLQLFMESFQSHgwniissnrvfrgNNGDYIGevyegivtkemlgsrnIIGNQVFtKTKYFIEVGGF 173
Cdd:cd00761   81 ILFLDADDLLLPDWLERLVAELLAD-------------PEADAVG----------------GPGNLLF-RRELLEEIGGF 130

                        170       180
                 ....*....|....*....|....*.
gi 943490854 174 DTSFPAWQDYDMWFRVVQKFGPSHRI 199
Cdd:cd00761  131 DEALLSGEEDDDFLLRLLRGGKVAFR 156
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
 2-250 8.01e-32

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 119.85  E-value: 8.01e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   2 KNIEIQEKPLITVYIPTHNRSILLKRAVDSVLRQTY--ENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGAC 79
Cdd:COG1215   21 RRRAPADLPRVSVIIPAYNEEAVIEETLRSLLAQDYpkEKLEVIVVDDGSTDETAEIARELAAEYPRVRVIERPENGGKA 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  80 FSRNRCIELAKGEFITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRgnngdyigevyegivtkemlgsrniignq 159
Cdd:COG1215  101 AALNAGLKAARGDIVVFLDADTVLDPDWLRRLVAAFADPGVGASGANLAFR----------------------------- 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854 160 vftkTKYFIEVGGFDTSFPAwQDYDMWFRVVQKfGpsHRISNASYIFYVDEDRPRITTGSR-----AYHGYQLFIeKHKN 234
Cdd:COG1215  152 ----REALEEVGGFDEDTLG-EDLDLSLRLLRA-G--YRIVYVPDAVVYEEAPETLRALFRqrrrwARGGLQLLL-KHRP 222

                        250
                 ....*....|....*.
gi 943490854 235 ELSSKQLNSLFFQDLL 250
Cdd:COG1215  223 LLRPRRLLLFLLLLLL 238
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
 13-135 1.65e-30

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 112.49  E-value: 1.65e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   13 TVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIELAKGE 92
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKDPRVRVIRLPENRGKAGARNAGLRAATGD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 943490854   93 FITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRGNNGD 135
Cdd:pfam00535  81 YIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETG 123
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
9-232 4.75e-27

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 104.69  E-value: 4.75e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   9 KPLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRdhRVKFIRNNEPKGACFSRNRCIEL 88
Cdd:COG1216    2 RPKVSVVIPTYNRPELLRRCLESLLAQTYPPFEVIVVDNGSTDGTAELLAALAFP--RVRVIRNPENLGFAAARNLGLRA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  89 AKGEFITGLDDDDEFVENRLQlfmesfqshgwniissnrvfrgnngdyigevyegivtkEMLGSRNiignqVFTKTKYFI 168
Cdd:COG1216   80 AGGDYLLFLDDDTVVEPDWLE--------------------------------------RLLAAAC-----LLIRREVFE 116

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 943490854 169 EVGGFDTSFPA-WQDYDMWFRVVQKfGPSHRISNASYIFYVdeDRPRITTGSRAYHGY---QLFIEKH 232
Cdd:COG1216  117 EVGGFDERFFLyGEDVDLCLRLRKA-GYRIVYVPDAVVYHL--GGASSGPLLRAYYLGrnrLLFLRKH 181
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
 13-200 2.68e-26

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 102.62  E-value: 2.68e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  13 TVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLvdLASRDHRVKFIRnnEP-KG---ACfsrNRCIEL 88
Cdd:cd06433    1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDII--KKYEDKITYWIS--EPdKGiydAM---NKGIAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  89 AKGEFITGLDDDDEFVENRLQLFMESFQSH-GWNIISSNRVFRGNNGDYIGEVYEGIVTKEMLGSRNIIGNQ-VFTKTKY 166
Cdd:cd06433   74 ATGDIIGFLNSDDTLLPGALLAVVAAFAEHpEVDVVYGDVLLVDENGRVIGRRRPPPFLDKFLLYGMPICHQaTFFRRSL 153

                        170       180       190
                 ....*....|....*....|....*....|....
gi 943490854 167 FIEVGGFDTSFPAWQDYDMWFRVVQKFGPSHRIS 200
Cdd:cd06433  154 FEKYGGFDESYRIAADYDLLLRLLLAGKIFKYLP 187
GT2_RfbC_Mx_like cd04184
Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene ...
 10-207 4.34e-26

Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133027 [Multi-domain]  Cd Length: 202  Bit Score: 101.90  E-value: 4.34e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  10 PLITVYIPTHNRSIL-LKRAVDSVLRQTYENFEIIICDDGSSDN-TADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIE 87
Cdd:cd04184    1 PLISIVMPVYNTPEKyLREAIESVRAQTYPNWELCIADDASTDPeVKRVLKKYAAQDPRIKVVFREENGGISAATNSALE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  88 LAKGEFITGLDDDDEFVENRL----QLFMESFQShgwNIISSNRvfrgnngDYI---GEVYEgIVTK-----EMLGSRNI 155
Cdd:cd04184   81 LATGEFVALLDHDDELAPHALyevvKALNEHPDA---DLIYSDE-------DKIdegGKRSE-PFFKpdwspDLLLSQNY 149

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 943490854 156 IGNQVFTKTKYFIEVGGFDTSFPAWQDYDMWFRVVQKfgpSHRISNASYIFY 207
Cdd:cd04184  150 IGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRVSEH---TDRIAHIPRVLY 198
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 16-192 9.94e-20

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 84.15  E-value: 9.94e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  16 IPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASrdhRVKFIRNNEPKGacFSR--NRCIELAKGEF 93
Cdd:cd04186    3 IVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFP---EVRLIRNGENLG--FGAgnNQGIREAKGDY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  94 ITGLDDDDEFVENRLQLFMESFQSHGWniissnrvfrgnngdyIGevyegivtkeMLGSRnIIGNQVFTKTKYFIEVGGF 173
Cdd:cd04186   78 VLLLNPDTVVEPGALLELLDAAEQDPD----------------VG----------IVGPK-VSGAFLLVRREVFEEVGGF 130

                        170       180
                 ....*....|....*....|
gi 943490854 174 DTS-FPAWQDYDMWFRVVQK 192
Cdd:cd04186  131 DEDfFLYYEDVDLCLRARLA 150
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
 11-246 2.63e-18

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 82.28  E-value: 2.63e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  11 LITVYIPTHNRSILLKRAVDSVLRQTY--ENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRN---NEPKGacfsRNRC 85
Cdd:cd02525    1 FVSIIIPVRNEEKYIEELLESLLNQSYpkDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNpkrIQSAG----LNIG 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  86 IELAKGEFITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRGNNGdyiGEVYEGIVTKEMLGS-----RNIIGNQV 160
Cdd:cd02525   77 IRNSRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESK---FQKAIAVAQSSPLGSggsayRGGAVKIG 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854 161 FTKTKY--------FIEVGGFDTSFPAWQDYDMwfrvvqkfgpSHRISNASYIFYVDED-----RPRITTGS--RAYHGY 225
Cdd:cd02525  154 YVDTVHhgayrrevFEKVGGFDESLVRNEDAEL----------NYRLRKAGYKIWLSPDirvyyYPRSTLKKlaRQYFRY 223

                        250       260
                 ....*....|....*....|....*
gi 943490854 226 QLFI----EKHKNELSSKQLNSLFF 246
Cdd:cd02525  224 GKWRartlRKHRKSLSLRHLLPLAF 248
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
 14-176 3.58e-17

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 77.65  E-value: 3.58e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLA-SRDHRVKFIRNNEPKG---ACfsrNRCIELA 89
Cdd:cd06423    1 IIVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAaLYIRRVLVVRDKENGGkagAL---NAGLRHA 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  90 KGEFITGLDDDDEFVENRLQ-LFMESFQSHGWNIISSN-RVFRGNNG--------DYIGEVYEGIVTKEMLGSRNIIG-- 157
Cdd:cd06423   78 KGDIVVVLDADTILEPDALKrLVVPFFADPKVGAVQGRvRVRNGSENlltrlqaiEYLSIFRLGRRAQSALGGVLVLSga 157

                        170
                 ....*....|....*....
gi 943490854 158 NQVFtKTKYFIEVGGFDTS 176
Cdd:cd06423  158 FGAF-RREALREVGGWDED 175
GT_2_like_d cd04196
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 13-126 4.81e-15

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133039 [Multi-domain]  Cd Length: 214  Bit Score: 72.28  E-value: 4.81e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  13 TVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGAcFSRN--RCIELAK 90
Cdd:cd04196    1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLG-VARNfeSLLQAAD 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 943490854  91 GEFITGLDDDDEFVENRLQLFMESFQS-HGWNIISSN 126
Cdd:cd04196   80 GDYVFFCDQDDIWLPDKLERLLKAFLKdDKPLLVYSD 116
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
 16-100 1.05e-13

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 67.89  E-value: 1.05e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  16 IPTHN--RSI-LLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRnnepkgacFSRN-------RC 85
Cdd:cd04187    3 VPVYNeeENLpELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIR--------LSRNfgqqaalLA 74

                         90
                 ....*....|....*.
gi 943490854  86 -IELAKGEFITGLDDD 100
Cdd:cd04187   75 gLDHARGDAVITMDAD 90
GT_2_like_b cd04185
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 18-223 1.15e-13

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133028 [Multi-domain]  Cd Length: 202  Bit Score: 68.43  E-value: 1.15e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  18 THNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDhRVKFIRNNEPKGACFSRNRCIELA---KGEFI 94
Cdd:cd04185    5 TYNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLTSLGDLD-NIVYLRLPENLGGAGGFYEGVRRAyelGYDWI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  95 TGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFrgNNGDYIGevyegivtkeMLGSRNIIgNQV-FTKTKYFIevggf 173
Cdd:cd04185   84 WLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLD--PDGSFVG----------VLISRRVV-EKIgLPDKEFFI----- 145

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 943490854 174 dtsfpaWQDyDMWFRVvqkfgpshRISNASYIFYVdedrpritTGSRAYH 223
Cdd:cd04185  146 ------WGD-DTEYTL--------RASKAGPGIYV--------PDAVVVH 172
GT2_Chondriotin_Pol_N cd06420
N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin ...
 14-180 9.52e-13

N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.


Pssm-ID: 133042 [Multi-domain]  Cd Length: 182  Bit Score: 65.29  E-value: 9.52e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDH-RVKFIRnNEPKG--ACFSRNRCIELAK 90
Cdd:cd06420    1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFPiPIKHVW-QEDEGfrKAKIRNKAIAAAK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  91 GEFITGLDDD----DEFVENRLQLfMESfqshGWnIISSNRVfrgnngdyigevyegIVTKEMLgSRNIIG-NQVFTKtK 165
Cdd:cd06420   80 GDYLIFIDGDciphPDFIADHIEL-AEP----GV-FLSGSRV---------------LLNEKLT-ERGIRGcNMSFWK-K 136

                        170
                 ....*....|....*
gi 943490854 166 YFIEVGGFDTSFPAW 180
Cdd:cd06420  137 DLLAVNGFDEEFTGW 151
PRK10073 PRK10073
putative glycosyl transferase; Provisional
 1-103 9.94e-13

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 67.38  E-value: 9.94e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   1 MKNIEiqekPLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIrNNEPKGACF 80
Cdd:PRK10073   1 MMNST----PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLL-HQANAGVSV 75

                         90       100
                 ....*....|....*....|...
gi 943490854  81 SRNRCIELAKGEFITGLDDDDEF 103
Cdd:PRK10073  76 ARNTGLAVATGKYVAFPDADDVV 98
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
 10-191 3.98e-11

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 61.62  E-value: 3.98e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   10 PLITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASR--DHRVKFIRN---NEPKGACFSRNR 84
Cdd:pfam13641   2 PDVSVVVPAFNEDSVLGRVLEAILAQPYPPVEVVVVVNPSDAETLDVAEEIAARfpDVRLRVIRNarlLGPTGKSRGLNH 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   85 CIELAKGEFITGLDDDD----EFVENRLQLfmesFQSHGWNIISSNRvfRGNNGDY----IGEVYEGIVTKEMLGSRNII 156
Cdd:pfam13641  82 GFRAVKSDLVVLHDDDSvlhpGTLKKYVQY----FDSPKVGAVGTPV--FSLNRSTmlsaLGALEFALRHLRMMSLRLAL 155

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 943490854  157 ------GNQVFTKTKYFIEVGGFDTSFPAWQDYDMWFRVVQ 191
Cdd:pfam13641 156 gvlplsGAGSAIRREVLKELGLFDPFFLLGDDKSLGRRLRR 196
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 14-175 2.19e-10

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 59.61  E-value: 2.19e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRSILLKRAVDSVLRQTY--ENFEIIICDDGSSDNTADYLVDLASRDH-RVKFIRNNEP--KGACFSRNRCIEL 88
Cdd:cd04192    1 VVIAARNEAENLPRLLQSLSALDYpkEKFEVILVDDHSTDGTVQILEFAAAKPNfQLKILNNSRVsiSGKKNALTTAIKA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  89 AKGEFITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRGNNG--------D--YIGEVYEGIVTKEM--LGSRNii 156
Cdd:cd04192   81 AKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSllakfqrlDwlSLLGLIAGSFGLGKpfMCNGA-- 158

                        170
                 ....*....|....*....
gi 943490854 157 gNQVFTKTKYFiEVGGFDT 175
Cdd:cd04192  159 -NMAYRKEAFF-EVGGFEG 175
DPM_DPG-synthase_like cd04179
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ...
 16-136 3.68e-10

DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133022 [Multi-domain]  Cd Length: 185  Bit Score: 57.97  E-value: 3.68e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  16 IPTHN--RSI--LLKRAVDsVLRQTYEnFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKG---ACFsrnRCIEL 88
Cdd:cd04179    3 IPAYNeeENIpeLVERLLA-VLEEGYD-YEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGkgaAVR---AGFKA 77

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 943490854  89 AKGEFITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRVFRGNNGDY 136
Cdd:cd04179   78 ARGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFVRGGGAGM 125
beta3GnTL1_like cd06913
Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of ...
 14-123 6.49e-10

Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine ; This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.


Pssm-ID: 133063 [Multi-domain]  Cd Length: 219  Bit Score: 57.85  E-value: 6.49e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRSILLKRAVDSVLRQTYEN-FEIIICDDGSSDNTADYLVDLASR--DHRVKFI----RNNEPKGACFSRNRCI 86
Cdd:cd06913    1 IILPVHNGEQWLDECLESVLQQDFEGtLELSVFNDASTDKSAEIIEKWRKKleDSGVIVLvgshNSPSPKGVGYAKNQAI 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 943490854  87 ELAKGEFITGLDDDDEFVENRLQLFMESFQSHGWNII 123
Cdd:cd06913   81 AQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPNSII 117
EPS_HpsE NF038302
hormogonium polysaccharide biosynthesis glycosyltransferase HpsE;
12-100 6.75e-10

hormogonium polysaccharide biosynthesis glycosyltransferase HpsE;


Pssm-ID: 439602 [Multi-domain]  Cd Length: 307  Bit Score: 58.65  E-value: 6.75e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  12 ITVYIPTHNRSILLKRAVDSVLRQTY-ENF--EIIICDDGSSDNTADYLVDLA---SRDHRVKFIRnnEPK-GACFSRNR 84
Cdd:NF038302   3 FTVAIPTYNGANRLPEVLERLRSQIGtESLswEIIVVDNNSTDNTAQVVQEYQknwPSPYPLRYCF--EPQqGAAFARQR 80

                         90
                 ....*....|....*.
gi 943490854  85 CIELAKGEFITGLDDD 100
Cdd:NF038302  81 AIQEAKGELIGFLDDD 96
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
 8-94 2.45e-08

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 53.74  E-value: 2.45e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   8 EKPLITVYIPTHNRSILLKRAVDSVLRQTY--ENFEIIICDDGSSDNTADYLVDLAsrDHRVKFIRNNEPKGACFSRNRC 85
Cdd:cd06439   27 YLPTVTIIIPAYNEEAVIEAKLENLLALDYprDRLEIIVVSDGSTDGTAEIAREYA--DKGVKLLRFPERRGKAAALNRA 104


                 ....*....
gi 943490854  86 IELAKGEFI 94
Cdd:cd06439  105 LALATGEIV 113
pp-GalNAc-T cd02510
pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide ...
 13-109 5.85e-08

pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.


Pssm-ID: 133004 [Multi-domain]  Cd Length: 299  Bit Score: 52.98  E-value: 5.85e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  13 TVYIPTHN--RSILLkRAVDSVLRQTYENF--EIIICDDGSSDntaDYLVDLASRDHR-----VKFIRNNEPKGACFSRN 83
Cdd:cd02510    1 SVIIIFHNeaLSTLL-RTVHSVINRTPPELlkEIILVDDFSDK---PELKLLLEEYYKkylpkVKVLRLKKREGLIRARI 76

                         90       100
                 ....*....|....*....|....*.
gi 943490854  84 RCIELAKGEFITGLDDDDEFVENRLQ 109
Cdd:cd02510   77 AGARAATGDVLVFLDSHCEVNVGWLE 102
Beta4Glucosyltransferase cd02511
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of ...
 12-148 3.16e-07

UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.


Pssm-ID: 133005 [Multi-domain]  Cd Length: 229  Bit Score: 50.36  E-value: 3.16e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  12 ITVYIPTHNRSILLKRAVDSVLRQTYEnfeIIICDDGSSDNTadylVDLAsRDHRVKFIRnNEPKGacFS--RNRCIELA 89
Cdd:cd02511    2 LSVVIITKNEERNIERCLESVKWAVDE---IIVVDSGSTDRT----VEIA-KEYGAKVYQ-RWWDG--FGaqRNFALELA 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  90 KGEFITGLDDDDEFVE--------------------NRLQLFMESFQSHGWNIISSN-RVFRGNNGDY-IGEVYEGIVTK 147
Cdd:cd02511   71 TNDWVLSLDADERLTPeladeilallatddydgyyvPRRNFFLGRWIRHGGWYPDRQlRLFRRGKARFeDGRVHEQVVVD 150


                 .
gi 943490854 148 E 148
Cdd:cd02511  151 G 151
GT2_AmsE_like cd04195
GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a ...
 11-192 9.59e-07

GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133038 [Multi-domain]  Cd Length: 201  Bit Score: 48.47  E-value: 9.59e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  11 LITVYIpthNRSIL-LKRAVDSVLRQTYENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKGACFSRNRCIELA 89
Cdd:cd04195    3 LMSVYI---KEKPEfLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLPLKVVPLEKNRGLGKALNEGLKHC 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  90 KGEFITGLDDDDEFVENRLQLFMESFQSHGWNIISSNRV--FRGNNGDYIGevyegivTKEMLGSRNII----------- 156
Cdd:cd04195   80 TYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVleFDSDGNDIGK-------RRLPTSHDDILkfarrrspfnh 152

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 943490854 157 GNQVFTKTKyFIEVGGFDTsFPAWQDYDMWFRVVQK 192
Cdd:cd04195  153 PTVMFRKSK-VLAVGGYQD-LPLVEDYALWARMLAN 186
GT_2_like_a cd02522
GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; ...
 12-94 1.21e-06

GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133013 [Multi-domain]  Cd Length: 221  Bit Score: 48.34  E-value: 1.21e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  12 ITVYIPTHNRSILLKRAVDSVLRQTYENFEIIICDDGSSDNTAdylvdLASRDHRVKFIRnnEPKGacfsR----NRCIE 87
Cdd:cd02522    1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGTV-----AIARSAGVVVIS--SPKG----RarqmNAGAA 69


                 ....*..
gi 943490854  88 LAKGEFI 94
Cdd:cd02522   70 AARGDWL 76
Glyco_tranf_2_2 pfam10111
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
 30-189 1.64e-06

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 313356 [Multi-domain]  Cd Length: 276  Bit Score: 48.43  E-value: 1.64e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854   30 DSVLRQTY---ENFEIIICDDGSSDNTADYLVDLasRDHRVKFIRNNEPK---GACFSRNRCIELAKGEFITGLDDDDEF 103
Cdd:pfam10111  17 ERILNQTFqydPEFELIIINDGSTDKTLEEVSSI--KDHNLQVYYPNAPDttySLAASRNRGTSHAIGEYISFIDGDCLW 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  104 VENRLQLFMESFQSHG---------------WNIISSNRVFRGNNGDYIGEVYEGIVTKEMLGSRNII--GNQVFTKTKY 166
Cdd:pfam10111  95 SPDKFEKQLKIATSLAlqeniqaavvlpvtdLNDESSNFLRRGGDLTASGDVLRDLLVFYSPLAIFFApnSSNALINRQA 174

                         170       180
                  ....*....|....*....|....*
gi 943490854  167 FIEVGGFDTSF--PAWQDYDMWFRV 189
Cdd:pfam10111 175 FIEVGGFDESFrgHGAEDFDIFLRL 199
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
 14-100 2.27e-05

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 44.45  E-value: 2.27e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRS---ILLKRAVDSVLRQtyENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPKG---ACFsrnRCIE 87
Cdd:cd06442    1 IIIPTYNEReniPELIERLDAALKG--IDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGlgsAYI---EGFK 75

                         90
                 ....*....|...
gi 943490854  88 LAKGEFITGLDDD 100
Cdd:cd06442   76 AARGDVIVVMDAD 88
GlcNAc-1-P_transferase cd06436
N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1, ...
 14-75 2.18e-04

N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine; N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.


Pssm-ID: 133058 [Multi-domain]  Cd Length: 191  Bit Score: 41.22  E-value: 2.18e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 943490854  14 VYIPTHNRSILLKRAVDSVLRQTyENFEIIICDDGSSDNTADyLVDLASRDHRVKFIRNNEP 75
Cdd:cd06436    1 VLVPCLNEEAVIQRTLASLLRNK-PNFLVLVIDDASDDDTAG-IVRLAITDSRVHLLRRHLP 60
PTZ00260 PTZ00260
dolichyl-phosphate beta-glucosyltransferase; Provisional
 39-127 9.75e-04

dolichyl-phosphate beta-glucosyltransferase; Provisional


Pssm-ID: 240336 [Multi-domain]  Cd Length: 333  Bit Score: 40.14  E-value: 9.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  39 NFEIIICDDGSSDNTA----DYLVDLASRDHRVKFIRNNEPKGACFSRNRCIELAKGEFITGLDDD-----DEFveNRLQ 109
Cdd:PTZ00260 107 KYEIIIVNDGSKDKTLkvakDFWRQNINPNIDIRLLSLLRNKGKGGAVRIGMLASRGKYILMVDADgatdiDDF--DKLE 184

                         90
                 ....*....|....*...
gi 943490854 110 LFMESFQSHGWNIISSNR 127
Cdd:PTZ00260 185 DIMLKIEQNGLGIVFGSR 202
PRK10714 PRK10714
undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
 12-62 1.59e-03

undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional


Pssm-ID: 182669 [Multi-domain]  Cd Length: 325  Bit Score: 39.72  E-value: 1.59e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 943490854  12 ITVYIPTHNRS----ILLKRAvDSVLRQTYENFEIIICDDGSSDNTADYLVDLAS 62
Cdd:PRK10714   8 VSVVIPVYNEQeslpELIRRT-TAACESLGKEYEILLIDDGSSDNSAEMLVEAAQ 61
PLN02726 PLN02726
dolichyl-phosphate beta-D-mannosyltransferase
 8-55 2.14e-03

dolichyl-phosphate beta-D-mannosyltransferase


Pssm-ID: 215385 [Multi-domain]  Cd Length: 243  Bit Score: 38.91  E-value: 2.14e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 943490854   8 EKPLITVYIPTHNRSI-------LLKRAVDSVlrqtyENFEIIICDDGSSDNTAD 55
Cdd:PLN02726   7 GAMKYSIIVPTYNERLnialivyLIFKALQDV-----KDFEIIVVDDGSPDGTQD 56
CESA_CelA_like cd06421
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of ...
 10-100 2.43e-03

CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.


Pssm-ID: 133043 [Multi-domain]  Cd Length: 234  Bit Score: 38.71  E-value: 2.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  10 PLITVYIPTHNRSI-LLKRAVDSVLRQTY--ENFEIIICDDGSSDNTADYLVDLASRDHRVKFIRNNEPK---GACfsrN 83
Cdd:cd06421    1 PTVDVFIPTYNEPLeIVRKTLRAALAIDYphDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNRHakaGNL---N 77

                         90
                 ....*....|....*..
gi 943490854  84 RCIELAKGEFITGLDDD 100
Cdd:cd06421   78 NALAHTTGDFVAILDAD 94
DPG_synthase cd04188
DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate ...
 14-100 3.59e-03

DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.


Pssm-ID: 133031 [Multi-domain]  Cd Length: 211  Bit Score: 37.93  E-value: 3.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 943490854  14 VYIPTHNRSILLKRAVDSVL-----RQTYEnFEIIICDDGSSDNTADYLVDLA-SRDHRVKFIRNNEPKGACFSRNRCIE 87
Cdd:cd04188    1 VVIPAYNEEKRLPPTLEEAVeyleeRPSFS-YEIIVVDDGSKDGTAEVARKLArKNPALIRVLTLPKNRGKGGAVRAGML 79

                         90
                 ....*....|...
gi 943490854  88 LAKGEFITGLDDD 100
Cdd:cd04188   80 AARGDYILFADAD 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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