NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|941160955|gb|JAL09117|]
View 

Phosphatase and actin regulator [Daphnia magna]

Protein Classification

RPEL repeat-containing protein( domain architecture ID 10499653)

RPEL repeat-containing protein such as Phactrs 1-4, a family of protein phosphatase 1 and actin regulatory proteins

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
920-945 1.32e-07

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


:

Pssm-ID: 128947  Cd Length: 26  Bit Score: 48.24  E-value: 1.32e-07
                            10        20
                    ....*....|....*....|....*.
gi 941160955    920 ARLTRRLSLRPTQEELEERNILKRTS 945
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 883-906 6.80e-07

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


:

Pssm-ID: 460677  Cd Length: 24  Bit Score: 46.11  E-value: 6.80e-07
                           10        20
                   ....*....|....*....|....
gi 941160955   883 SLALKLAMRPDRQELIERGILHAQ 906
Cdd:pfam02755    1 SLERKLSHRPTREELVERNILPED 24
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
959-983 1.36e-05

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


:

Pssm-ID: 128947  Cd Length: 26  Bit Score: 42.46  E-value: 1.36e-05
                            10        20
                    ....*....|....*....|....*
gi 941160955    959 TLFRKLSFRPTVEELKARKIIRFND 983
Cdd:smart00707    2 VLNRKLSQRPTREELEERNILKELS 26
 
Name Accession Description Interval E-value
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
920-945 1.32e-07

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 48.24  E-value: 1.32e-07
                            10        20
                    ....*....|....*....|....*.
gi 941160955    920 ARLTRRLSLRPTQEELEERNILKRTS 945
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 883-906 6.80e-07

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 46.11  E-value: 6.80e-07
                           10        20
                   ....*....|....*....|....
gi 941160955   883 SLALKLAMRPDRQELIERGILHAQ 906
Cdd:pfam02755    1 SLERKLSHRPTREELVERNILPED 24
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 921-944 7.55e-06

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 43.42  E-value: 7.55e-06
                           10        20
                   ....*....|....*....|....
gi 941160955   921 RLTRRLSLRPTQEELEERNILKRT 944
Cdd:pfam02755    1 SLERKLSHRPTREELVERNILPED 24
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
959-983 1.36e-05

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 42.46  E-value: 1.36e-05
                            10        20
                    ....*....|....*....|....*
gi 941160955    959 TLFRKLSFRPTVEELKARKIIRFND 983
Cdd:smart00707    2 VLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
882-904 2.24e-05

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 42.08  E-value: 2.24e-05
                            10        20
                    ....*....|....*....|...
gi 941160955    882 DSLALKLAMRPDRQELIERGILH 904
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILK 23
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 962-982 1.62e-03

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 36.87  E-value: 1.62e-03
                           10        20
                   ....*....|....*....|.
gi 941160955   962 RKLSFRPTVEELKARKIIRFN 982
Cdd:pfam02755    4 RKLSHRPTREELVERNILPED 24
 
Name Accession Description Interval E-value
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
920-945 1.32e-07

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 48.24  E-value: 1.32e-07
                            10        20
                    ....*....|....*....|....*.
gi 941160955    920 ARLTRRLSLRPTQEELEERNILKRTS 945
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 883-906 6.80e-07

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 46.11  E-value: 6.80e-07
                           10        20
                   ....*....|....*....|....
gi 941160955   883 SLALKLAMRPDRQELIERGILHAQ 906
Cdd:pfam02755    1 SLERKLSHRPTREELVERNILPED 24
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 921-944 7.55e-06

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 43.42  E-value: 7.55e-06
                           10        20
                   ....*....|....*....|....
gi 941160955   921 RLTRRLSLRPTQEELEERNILKRT 944
Cdd:pfam02755    1 SLERKLSHRPTREELVERNILPED 24
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
959-983 1.36e-05

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 42.46  E-value: 1.36e-05
                            10        20
                    ....*....|....*....|....*
gi 941160955    959 TLFRKLSFRPTVEELKARKIIRFND 983
Cdd:smart00707    2 VLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
882-904 2.24e-05

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 42.08  E-value: 2.24e-05
                            10        20
                    ....*....|....*....|...
gi 941160955    882 DSLALKLAMRPDRQELIERGILH 904
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILK 23
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 962-982 1.62e-03

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 36.87  E-value: 1.62e-03
                           10        20
                   ....*....|....*....|.
gi 941160955   962 RKLSFRPTVEELKARKIIRFN 982
Cdd:pfam02755    4 RKLSHRPTREELVERNILPED 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH