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Conserved domains on  [gi|940328420|gb|ALJ98957|]
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xanthine dehydrogenase [Acinetobacter phage Ab105-3phi]

Protein Classification

xanthine dehydrogenase small subunit( domain architecture ID 11468536)

xanthine dehydrogenase small subunit is part of the (alphabeta)(2) heterotetrameric cytoplasmic enzyme that functions in the oxidative metabolism of purines such as xanthine and hypoxanthine

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
 6-490 0e+00

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


:

Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 766.61  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   6 ITFFFRGGQQQVENIVPTMTVLQFLREytqtgKTRQTGTKEGCAEGDCGACTVVIGELVNDNLQLRSVNACIQFLPTLDG 85
Cdd:COG4630    1 IRFLLNGELVELSDVPPTTTLLDWLRE-----DRGLTGTKEGCAEGDCGACTVVVGELDDGGLRYRAVNACILFLPQLDG 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  86 KALFTVEDLHSllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQsLSKDKISDYLSGNLCRCTGYRPIL 165
Cdd:COG4630   76 KALVTVEGLAG----PDGALHPVQQAMVDHHGSQCGFCTPGFVMSLFALYERGPA-PDRADIEDALSGNLCRCTGYRPII 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 166 DAAQKAYDYP---RVVLERQKVIDVLKEIRTLPALYLNDQKQQFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQG 242
Cdd:COG4630  151 DAARAMAEAPapdPFAADRAAVAAALRALADGETVELGAGGSRFLAPATLDELAALLAAHPDARLVAGATDVGLWVTKQL 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 243 RDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIKISDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMP 322
Cdd:COG4630  231 RDLPPVIFLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAAHFPELAELLRRFASRQIRNAGTLGGNIANGSPIGDSPP 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 323 ALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGEFVEAIVIPLREGQTRFKFasYKIAKRFEQDISAVCAAISCEL 402
Cdd:COG4630  311 ALIALGAELVLRSGDGRRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPAAGQRLRA--YKVSKRFDDDISAVCAAFALTL 388

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 403 DNDDVTHnVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKRFYLEKI 482
Cdd:COG4630  389 DDGTVTE-ARIAFGGMAATPKRARAAEAALLGQPWTEATVAAAAAALAQDFTPLSDMRASAEYRLAVAANLLRRFFLETQ 467


                 ....*...
gi 940328420 483 LSQTLTRV 490
Cdd:COG4630  468 GEAPATRV 475
 
Name Accession Description Interval E-value
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
 6-490 0e+00

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 766.61  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   6 ITFFFRGGQQQVENIVPTMTVLQFLREytqtgKTRQTGTKEGCAEGDCGACTVVIGELVNDNLQLRSVNACIQFLPTLDG 85
Cdd:COG4630    1 IRFLLNGELVELSDVPPTTTLLDWLRE-----DRGLTGTKEGCAEGDCGACTVVVGELDDGGLRYRAVNACILFLPQLDG 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  86 KALFTVEDLHSllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQsLSKDKISDYLSGNLCRCTGYRPIL 165
Cdd:COG4630   76 KALVTVEGLAG----PDGALHPVQQAMVDHHGSQCGFCTPGFVMSLFALYERGPA-PDRADIEDALSGNLCRCTGYRPII 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 166 DAAQKAYDYP---RVVLERQKVIDVLKEIRTLPALYLNDQKQQFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQG 242
Cdd:COG4630  151 DAARAMAEAPapdPFAADRAAVAAALRALADGETVELGAGGSRFLAPATLDELAALLAAHPDARLVAGATDVGLWVTKQL 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 243 RDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIKISDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMP 322
Cdd:COG4630  231 RDLPPVIFLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAAHFPELAELLRRFASRQIRNAGTLGGNIANGSPIGDSPP 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 323 ALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGEFVEAIVIPLREGQTRFKFasYKIAKRFEQDISAVCAAISCEL 402
Cdd:COG4630  311 ALIALGAELVLRSGDGRRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPAAGQRLRA--YKVSKRFDDDISAVCAAFALTL 388

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 403 DNDDVTHnVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKRFYLEKI 482
Cdd:COG4630  389 DDGTVTE-ARIAFGGMAATPKRARAAEAALLGQPWTEATVAAAAAALAQDFTPLSDMRASAEYRLAVAANLLRRFFLETQ 467


                 ....*...
gi 940328420 483 LSQTLTRV 490
Cdd:COG4630  468 GEAPATRV 475
xanthine_xdhA TIGR02963
xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit ...
 6-480 0e+00

xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 274365 [Multi-domain]  Cd Length: 467  Bit Score: 722.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420    6 ITFFFRGGQQQVENIVPTMTVLQFLREytqtgKTRQTGTKEGCAEGDCGACTVVIGELVNDN-LQLRSVNACIQFLPTLD 84
Cdd:TIGR02963   1 IRFFLNGETVTLSDVDPTRTLLDYLRE-----DAGLTGTKEGCAEGDCGACTVVVGELVDGGkLRYRSVNACIQFLPSLD 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   85 GKALFTVEDLHSllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSlSKDKISDYLSGNLCRCTGYRPI 164
Cdd:TIGR02963  76 GKAVVTVEDLRQ----PDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAP-SRADIEDALQGNLCRCTGYRPI 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  165 LDAAQKAYDYP---RVVLERQKVIDVLKEIRTLPALYLNDQKQQFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQ 241
Cdd:TIGR02963 151 LDAAEAAFDYPcsdPLDADRAPIIERLRALRAGETVELNFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQ 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  242 GRDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIKISDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSM 321
Cdd:TIGR02963 231 MRDLPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKRYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSP 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  322 PALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGEFVEAIVIPLREGQTRfkFASYKIAKRFEQDISAVCAAISCE 401
Cdd:TIGR02963 311 PALIALGARLTLRKGEGRRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGER--FRAYKISKRFDDDISAVCAAFNLE 388

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940328420  402 LDNDDVTHnVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKRFYLE 480
Cdd:TIGR02963 389 LDGGVVAE-IRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFFLE 466
PLN02906 PLN02906
xanthine dehydrogenase
 24-479 3.03e-81

xanthine dehydrogenase


Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 275.04  E-value: 3.03e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   24 MTVLQFLREytqtgkTRQTGTKEGCAEGDCGACTVVIG--ELVNDNLQLRSVNACIQFLPTLDGKALFTVEDLHSllpVQ 101
Cdd:PLN02906    2 QTLLEYLRD------LGLTGTKLGCGEGGCGACTVMVShyDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGN---RR 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  102 DGtLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSLSKDKISDYLSGNLCRCTGYRPILDAAQ---KAYD---YP 175
Cdd:PLN02906   73 DG-LHPVQEALASMHGSQCGFCTPGFIMSMYALLRSSKTPPTEEQIEECLAGNLCRCTGYRPILDAFRvfaKTDDalyTG 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  176 RVVLERQK--------------------VIDVLKEIRTLPALYLN------DQKQQFFAPK------------------- 210
Cdd:PLN02906  152 VSSLSLQDgepicpstgkpcscgskttsAAGTCKSDRFQPISYSEidgswyTEKELIFPPElllrkltplkllgnggltw 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  211 ----TLQDFATLRLQLPQARIVAGSTDVGLWVTkqgrdLGDMLY-----IGQVEELKKIVVTDLALTIGANVSLS----- 276
Cdd:PLN02906  232 yrptSLQHLLELKAEYPDAKLVVGNTEVGIEMR-----FKNAQYpvlisPTHVPELNAIKVKDDGLEIGAAVRLSelqnl 306

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  277 -DALIKISDFYPD-----FQELQRRFASMPIKNAGTLGGNIANGSPIGDSMPALITLGTRL-ILRVGKQTREIALEDFYL 349
Cdd:PLN02906  307 fRKVVKERPAHETsackaFIEQLKWFAGTQIRNVASIGGNICTASPISDLNPLWMAAGATFvIISCDGDIRSVPASDFFL 386

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  350 DYQKTALQLGEFVEAIVIPLregqTR-FKFA-SYKIAKRFEQDISAVCAAISCEL---DNDDVTHNVRIAFGGMAAIPKR 424
Cdd:PLN02906  387 GYRKVDLKPDEILLSVFLPW----TRpFEYVkEFKQAHRRDDDIAIVNAGMRVKLeekDGEWIVSDASIAYGGVAPLSVS 462

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 940328420  425 AKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRAS-SAYRLHVAKNCLKRFYL 479
Cdd:PLN02906  463 ARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGmVEFRKSLALSFFFKFFL 518
FAD_binding_5 pfam00941
FAD binding domain in molybdopterin dehydrogenase;
205-369 6.85e-61

FAD binding domain in molybdopterin dehydrogenase;


Pssm-ID: 460007 [Multi-domain]  Cd Length: 170  Bit Score: 197.00  E-value: 6.85e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  205 QFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQGRDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIK-IS 283
Cdd:pfam00941   4 GYYRPASLAEALELLAAGPDAKLVAGGTSLGPLMKLRLARPDHLIDINGIPELRGIEETDGGLEIGAAVTLSEIAEPlLR 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  284 DFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMPALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGEFVE 363
Cdd:pfam00941  84 EAYPALSEALRKIASPQIRNVGTIGGNIANASPISDLPPALLALDAKVELRSGEGERTVPLEDFFLGYGKTALEPGELIT 163


                  ....*.
gi 940328420  364 AIVIPL 369
Cdd:pfam00941 164 AVIIPL 169
CO_deh_flav_C smart01092
CO dehydrogenase flavoprotein C-terminal domain;
380-480 7.42e-32

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 215021 [Multi-domain]  Cd Length: 102  Bit Score: 117.72  E-value: 7.42e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   380 SYKIAKRFEQDISAVCAAISCELDNDDVThNVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQ-AQQALSQDYQPLDD 458
Cdd:smart01092   1 AYKKSRRRDGDIALVSAAVALTLDGGRVT-EARIALGGVAPTPKRAAEAEAALVGKPLTDEALARaAAAALAQDFTPLSD 79

                           90       100
                   ....*....|....*....|..
gi 940328420   459 GRASSAYRLHVAKNCLKRFYLE 480
Cdd:smart01092  80 MRASAEYRRQLAANLLRRALLE 101
fer2 cd00207
2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in ...
 6-77 1.94e-03

2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.


Pssm-ID: 238126 [Multi-domain]  Cd Length: 84  Bit Score: 37.37  E-value: 1.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   6 ITFFFRGGQQQVEnIVPTMTVLQFLREytqTGKTrqtgTKEGCAEGDCGACTV-VIGELVNDNLQL---------RSVNA 75
Cdd:cd00207    1 VTINVPGSGVEVE-VPEGETLLDAARE---AGID----IPYSCRAGACGTCKVeVVEGEVDQSDPSlldeeeaegGYVLA 72


                 ..
gi 940328420  76 CI 77
Cdd:cd00207   73 CQ 74
 
Name Accession Description Interval E-value
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
 6-490 0e+00

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 766.61  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   6 ITFFFRGGQQQVENIVPTMTVLQFLREytqtgKTRQTGTKEGCAEGDCGACTVVIGELVNDNLQLRSVNACIQFLPTLDG 85
Cdd:COG4630    1 IRFLLNGELVELSDVPPTTTLLDWLRE-----DRGLTGTKEGCAEGDCGACTVVVGELDDGGLRYRAVNACILFLPQLDG 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  86 KALFTVEDLHSllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQsLSKDKISDYLSGNLCRCTGYRPIL 165
Cdd:COG4630   76 KALVTVEGLAG----PDGALHPVQQAMVDHHGSQCGFCTPGFVMSLFALYERGPA-PDRADIEDALSGNLCRCTGYRPII 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 166 DAAQKAYDYP---RVVLERQKVIDVLKEIRTLPALYLNDQKQQFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQG 242
Cdd:COG4630  151 DAARAMAEAPapdPFAADRAAVAAALRALADGETVELGAGGSRFLAPATLDELAALLAAHPDARLVAGATDVGLWVTKQL 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 243 RDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIKISDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMP 322
Cdd:COG4630  231 RDLPPVIFLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAAHFPELAELLRRFASRQIRNAGTLGGNIANGSPIGDSPP 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 323 ALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGEFVEAIVIPLREGQTRFKFasYKIAKRFEQDISAVCAAISCEL 402
Cdd:COG4630  311 ALIALGAELVLRSGDGRRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPAAGQRLRA--YKVSKRFDDDISAVCAAFALTL 388

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 403 DNDDVTHnVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKRFYLEKI 482
Cdd:COG4630  389 DDGTVTE-ARIAFGGMAATPKRARAAEAALLGQPWTEATVAAAAAALAQDFTPLSDMRASAEYRLAVAANLLRRFFLETQ 467


                 ....*...
gi 940328420 483 LSQTLTRV 490
Cdd:COG4630  468 GEAPATRV 475
xanthine_xdhA TIGR02963
xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit ...
 6-480 0e+00

xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 274365 [Multi-domain]  Cd Length: 467  Bit Score: 722.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420    6 ITFFFRGGQQQVENIVPTMTVLQFLREytqtgKTRQTGTKEGCAEGDCGACTVVIGELVNDN-LQLRSVNACIQFLPTLD 84
Cdd:TIGR02963   1 IRFFLNGETVTLSDVDPTRTLLDYLRE-----DAGLTGTKEGCAEGDCGACTVVVGELVDGGkLRYRSVNACIQFLPSLD 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   85 GKALFTVEDLHSllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSlSKDKISDYLSGNLCRCTGYRPI 164
Cdd:TIGR02963  76 GKAVVTVEDLRQ----PDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAP-SRADIEDALQGNLCRCTGYRPI 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  165 LDAAQKAYDYP---RVVLERQKVIDVLKEIRTLPALYLNDQKQQFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQ 241
Cdd:TIGR02963 151 LDAAEAAFDYPcsdPLDADRAPIIERLRALRAGETVELNFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQ 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  242 GRDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIKISDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSM 321
Cdd:TIGR02963 231 MRDLPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKRYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSP 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  322 PALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGEFVEAIVIPLREGQTRfkFASYKIAKRFEQDISAVCAAISCE 401
Cdd:TIGR02963 311 PALIALGARLTLRKGEGRRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGER--FRAYKISKRFDDDISAVCAAFNLE 388

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940328420  402 LDNDDVTHnVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKRFYLE 480
Cdd:TIGR02963 389 LDGGVVAE-IRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFFLE 466
PLN02906 PLN02906
xanthine dehydrogenase
 24-479 3.03e-81

xanthine dehydrogenase


Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 275.04  E-value: 3.03e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   24 MTVLQFLREytqtgkTRQTGTKEGCAEGDCGACTVVIG--ELVNDNLQLRSVNACIQFLPTLDGKALFTVEDLHSllpVQ 101
Cdd:PLN02906    2 QTLLEYLRD------LGLTGTKLGCGEGGCGACTVMVShyDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGN---RR 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  102 DGtLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSLSKDKISDYLSGNLCRCTGYRPILDAAQ---KAYD---YP 175
Cdd:PLN02906   73 DG-LHPVQEALASMHGSQCGFCTPGFIMSMYALLRSSKTPPTEEQIEECLAGNLCRCTGYRPILDAFRvfaKTDDalyTG 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  176 RVVLERQK--------------------VIDVLKEIRTLPALYLN------DQKQQFFAPK------------------- 210
Cdd:PLN02906  152 VSSLSLQDgepicpstgkpcscgskttsAAGTCKSDRFQPISYSEidgswyTEKELIFPPElllrkltplkllgnggltw 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  211 ----TLQDFATLRLQLPQARIVAGSTDVGLWVTkqgrdLGDMLY-----IGQVEELKKIVVTDLALTIGANVSLS----- 276
Cdd:PLN02906  232 yrptSLQHLLELKAEYPDAKLVVGNTEVGIEMR-----FKNAQYpvlisPTHVPELNAIKVKDDGLEIGAAVRLSelqnl 306

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  277 -DALIKISDFYPD-----FQELQRRFASMPIKNAGTLGGNIANGSPIGDSMPALITLGTRL-ILRVGKQTREIALEDFYL 349
Cdd:PLN02906  307 fRKVVKERPAHETsackaFIEQLKWFAGTQIRNVASIGGNICTASPISDLNPLWMAAGATFvIISCDGDIRSVPASDFFL 386

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  350 DYQKTALQLGEFVEAIVIPLregqTR-FKFA-SYKIAKRFEQDISAVCAAISCEL---DNDDVTHNVRIAFGGMAAIPKR 424
Cdd:PLN02906  387 GYRKVDLKPDEILLSVFLPW----TRpFEYVkEFKQAHRRDDDIAIVNAGMRVKLeekDGEWIVSDASIAYGGVAPLSVS 462

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 940328420  425 AKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRAS-SAYRLHVAKNCLKRFYL 479
Cdd:PLN02906  463 ARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGmVEFRKSLALSFFFKFFL 518
CutB COG1319
Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit [Energy production and conversion] ...
 205-476 2.37e-65

Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 440930 [Multi-domain]  Cd Length: 285  Bit Score: 212.68  E-value: 2.37e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 205 QFFAPKTLQD-FATLRLQLPQARIVAGSTDVGLWVtKQGRDLGDML-YIGQVEELKKIVVTDLALTIGANVSLSD----A 278
Cdd:COG1319    5 EYHRPTSLEEaLALLAEHGPDARVLAGGTDLLPLM-KLRLARPEHLvDINRIPELRGIEEEGGGLRIGALVTHAElaasP 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 279 LIKisDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMPALITLGTRLILRVGKQTREIALEDFYLDYQKTALQL 358
Cdd:COG1319   84 LVR--ERYPLLAEAARAIASPQIRNRGTIGGNLANADPAADLPPALLALDATVELAGPDGERTIPAADFFLGPGETALEP 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 359 GEFVEAIVIPLREGQTRFKFasYKIAKRFEQDISAVCAAISCELDNDDVTHnVRIAFGGMAAIPKRAKYAEAILEGQQIT 438
Cdd:COG1319  162 GELITAVRLPAPPAGAGSAY--LKVGRRASDAIALVSVAVALRLDGGTIRD-ARIALGGVAPTPWRAREAEAALAGKPLS 238

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 940328420 439 AELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKR 476
Cdd:COG1319  239 EEAIEAAAEAAAAAADPIDDVRASAEYRRHLARVLVRR 276
FAD_binding_5 pfam00941
FAD binding domain in molybdopterin dehydrogenase;
205-369 6.85e-61

FAD binding domain in molybdopterin dehydrogenase;


Pssm-ID: 460007 [Multi-domain]  Cd Length: 170  Bit Score: 197.00  E-value: 6.85e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  205 QFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQGRDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIK-IS 283
Cdd:pfam00941   4 GYYRPASLAEALELLAAGPDAKLVAGGTSLGPLMKLRLARPDHLIDINGIPELRGIEETDGGLEIGAAVTLSEIAEPlLR 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  284 DFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMPALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGEFVE 363
Cdd:pfam00941  84 EAYPALSEALRKIASPQIRNVGTIGGNIANASPISDLPPALLALDAKVELRSGEGERTVPLEDFFLGYGKTALEPGELIT 163


                  ....*.
gi 940328420  364 AIVIPL 369
Cdd:pfam00941 164 AVIIPL 169
mam_aldehyde_ox TIGR02969
aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, ...
 5-491 1.36e-50

aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.


Pssm-ID: 132014 [Multi-domain]  Cd Length: 1330  Bit Score: 186.37  E-value: 1.36e-50
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420     5 PITFFFRGGQQQVENIV-PTMTVLQFLREytqtgKTRQTGTKEGCAEGDCGACTVVIGEL--VNDNLQLRSVNACIQFLP 81
Cdd:TIGR02969    1 PELLFYVNGRKVVEKNVdPETMLLPYLRK-----KLRLTGTKYGCGGGGCGACTVMISRYnpSTKSIRHHPVNACLTPIC 75

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420    82 TLDGKALFTVEDLHSllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSlSKDKISDYLSGNLCRCTGY 161
Cdd:TIGR02969   76 SLYGAAVTTVEGIGS----TRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPEP-TLDQLTDALGGNLCRCTGY 150

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   162 RPILDAAQ---KAYD----------------------------YPRVVLERQKV-IDVLKEIRTLPALYLNDQKQ----- 204
Cdd:TIGR02969  151 RPIIDACKtfcKTSGccqskengvccldqginglpefeegdetSPELFSEEEFLpLDPTQELIFPPELMRMAEKQpqrtr 230

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   205 -------QFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQGRDLGDMLYIGQVEELKKIVVTDLALTIGANVSLS- 276
Cdd:TIGR02969  231 vfysermMWISPVTLKELLEAKFKYPQAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNHTGDGLTLGAGLSLAq 310

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   277 --DALIKISDFYPD-----FQELQRRFASMP---IKNAGTLGGNIANGSPIGDSMPALITLGTRLILRVGKQTREIALED 346
Cdd:TIGR02969  311 vkDILADVVQKLPEettqtYRALLKHLGTLAgsqIRNMASLGGHIISRHLDSDLNPLLAVGNCTLNLLSKEGKRQIPLSE 390

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   347 FYLDYQKTA-LQLGEFVEAIVIPLREgqtRFKFAS-YKIAKRFEQDISAVCAAISCEL-DNDDVTHNVRIAFGGMAAIPK 423
Cdd:TIGR02969  391 QFLSKCPDAdLKPQEILVSVNIPYSR---KWEFVSaFRQAQRQQNALAIVNSGMRVFFgEGDGIIRELSISYGGVGPTTI 467

                          490       500       510       520       530       540
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940328420   424 RAKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRASSA-YRLHVAKNCLKRFYLEkiLSQTLTRVN 491
Cdd:TIGR02969  468 CAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVeFKRTLIISFLFKFYLE--VSQILKRMD 534
CutS COG2080
Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and ...
 13-171 9.78e-48

Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441683 [Multi-domain]  Cd Length: 155  Bit Score: 162.18  E-value: 9.78e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  13 GQQQVENIVPTMTVLQFLREYTQtgktrQTGTKEGCAEGDCGACTVvigeLVNDnlqlRSVNACIQFLPTLDGKALFTVE 92
Cdd:COG2080   10 GKPVEVDVDPDTPLLDVLRDDLG-----LTGTKFGCGHGQCGACTV----LVDG----KAVRSCLTLAVQADGKEITTIE 76

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940328420  93 DLHsllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYEnEQQSLSKDKISDYLSGNLCRCTGYRPILDAAQKA 171
Cdd:COG2080   77 GLA-----EDGELHPLQQAFIEHGALQCGYCTPGMIMAAVALLD-ENPNPTEEEIREALSGNLCRCTGYVRIVRAVKRA 149
PLN00192 PLN00192
aldehyde oxidase
 3-477 6.76e-47

aldehyde oxidase


Pssm-ID: 215096 [Multi-domain]  Cd Length: 1344  Bit Score: 175.29  E-value: 6.76e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420    3 ERPITFFFRGGQQQVENIVPTMTVLQFLREytqtgKTRQTGTKEGCAEGDCGACTVVIGEL--VNDNLQLRSVNACIQFL 80
Cdd:PLN00192    3 NMSLVFAVNGERFELSSVDPSTTLLEFLRT-----QTPFKSVKLGCGEGGCGACVVLLSKYdpVLDQVEDFTVSSCLTLL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   81 PTLDGKALFTVEDLHSllpVQDGtLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSLSKDKISDY---------- 150
Cdd:PLN00192   78 CSVNGCSITTSEGLGN---SKDG-FHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFskltvveaek 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  151 -LSGNLCRCTGYRPILDAAQ-----------------KAYDYPRVVLERQKVIDVLKEIRTLP---------ALYLNDQK 203
Cdd:PLN00192  154 aVSGNLCRCTGYRPIVDACKsfaadvdiedlglnsfwKKGESEEAKLSKLPPYNHSDHICTFPeflkkeiksSLLLDSSR 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  204 QQFFAPKTLQDFATLrLQLPQA-----RIVAGSTDVGlwVTKQGRDLGDMLYIGQVEELKKIVVTDLALTIGANVSLS-- 276
Cdd:PLN00192  234 YRWYTPVSVEELQSL-LESNNFdgvsvKLVVGNTGTG--YYKDEELYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISka 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  277 -DALIKISDFYPDFQEL---QRRFASMPIKNAGTLGGNI--ANGSPI-GDSMPALITLGTRLILRVGKQTREIALEDFY- 348
Cdd:PLN00192  311 iEALREESKSEYVFKKIadhMEKIASRFVRNTGSIGGNLvmAQRKQFpSDIATILLAAGSTVNIQNASKREKLTLEEFLe 390

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  349 ---LDYQKTALqlgefveAIVIP----LREGQTRFKFASYKIAKR-FEQDISAVCAA----ISCELDNDDVT-HNVRIAF 415
Cdd:PLN00192  391 rppLDSKSLLL-------SVEIPswtsSSGSDTKLLFETYRAAPRpLGNALPYLNAAflaeVSQDASSGGIVvNDCRLAF 463

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 940328420  416 ---GGMAAIpkRAKYAEAILEGQQITAELIVQAQQALSQDYQPlDDGRASSAYRLHVAKNCLKRF 477
Cdd:PLN00192  464 gayGTKHAI--RARKVEEFLTGKVLSDSVLYEAVRLLKGIVVP-EDGTSHPEYRSSLAVGFLFDF 525
PRK09971 PRK09971
xanthine dehydrogenase subunit XdhB; Provisional
 204-476 2.20e-38

xanthine dehydrogenase subunit XdhB; Provisional


Pssm-ID: 182175 [Multi-domain]  Cd Length: 291  Bit Score: 141.72  E-value: 2.20e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 204 QQFFAPKTLQDFATLRLQLPQARIVAGSTDVgLWVTKQGRDLG-DMLYIGQVEELKKI-VVTDLALTIGANVSLS----D 277
Cdd:PRK09971   5 AEYHEAATLEEAIELLADNPQAKLIAGGTDV-LIQLHHHNDRYrHLVSIHNIAELRGItLAEDGSIRIGAATTFTqiieD 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 278 ALIKisDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMPALITLGTRLILRVGKQTREIALEDFYLDYQKTALQ 357
Cdd:PRK09971  84 PIIQ--KHLPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNGVRFVPINGFYTGPGKVSLE 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420 358 LGEFVEAIVIPlREGQTRFKFASYKIAKRFEQDISAVCAAISCELDNDDVThNVRIAFGGMAAIPKRAKYAEAILEGQQI 437
Cdd:PRK09971 162 HDEILVAFIIP-PEPYEHAGGAYIKYAMRDAMDIATIGCAVLCRLDNGNFE-DLRLAFGVAAPTPIRCQHAEQTAKGAPL 239

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 940328420 438 TAELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKR 476
Cdd:PRK09971 240 NLETLEAIGELVLQDVAPRSSWRASKEFRLHLIQELTKR 278
CO_deh_flav_C pfam03450
CO dehydrogenase flavoprotein C-terminal domain;
379-480 7.27e-35

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 460921 [Multi-domain]  Cd Length: 102  Bit Score: 125.75  E-value: 7.27e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  379 ASYKIAKRFEQDISAVCAAISCELDNDDVTHnVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQAQQALSQDYQPLDD 458
Cdd:pfam03450   1 AAYKQAKRRDDDIAIVNAAFRVRLDGGTVED-ARIAFGGVAPTPIRATEAEAALIGKPWDEETLEAAAALLLEDLSPLSD 79

                          90       100
                  ....*....|....*....|..
gi 940328420  459 GRASSAYRLHVAKNCLKRFYLE 480
Cdd:pfam03450  80 PRGSAEYRRHLARSLLFRFLLE 101
Fer2_2 pfam01799
[2Fe-2S] binding domain;
90-168 4.11e-32

[2Fe-2S] binding domain;


Pssm-ID: 460336 [Multi-domain]  Cd Length: 73  Bit Score: 117.53  E-value: 4.11e-32
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940328420   90 TVEDLhsllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSLSKDKISDYLSGNLCRCTGYRPILDAA 168
Cdd:pfam01799   1 TIEGL------AESGGEPVQQAFAEAGAVQCGYCTPGMIMSAYALLERNPPPPTEAEIREALSGNLCRCTGYRRIVDAV 73
CO_deh_flav_C smart01092
CO dehydrogenase flavoprotein C-terminal domain;
380-480 7.42e-32

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 215021 [Multi-domain]  Cd Length: 102  Bit Score: 117.72  E-value: 7.42e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   380 SYKIAKRFEQDISAVCAAISCELDNDDVThNVRIAFGGMAAIPKRAKYAEAILEGQQITAELIVQ-AQQALSQDYQPLDD 458
Cdd:smart01092   1 AYKKSRRRDGDIALVSAAVALTLDGGRVT-EARIALGGVAPTPKRAAEAEAALVGKPLTDEALARaAAAALAQDFTPLSD 79

                           90       100
                   ....*....|....*....|..
gi 940328420   459 GRASSAYRLHVAKNCLKRFYLE 480
Cdd:smart01092  80 MRASAEYRRQLAANLLRRALLE 101
PRK09908 PRK09908
xanthine dehydrogenase iron sulfur-binding subunit XdhC;
20-170 1.45e-28

xanthine dehydrogenase iron sulfur-binding subunit XdhC;


Pssm-ID: 182139 [Multi-domain]  Cd Length: 159  Bit Score: 110.78  E-value: 1.45e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  20 IVPTMTVLQFLREYTQTGktrqtgTKEGCAEGDCGACTVVIGELVNDnlqlrsvnACIQFLPTLDGKALFTVEDLHsllp 99
Cdd:PRK09908  22 AAPGTPLSELLREQGLLS------VKQGCCVGECGACTVLVDGTAID--------SCLYLAAWAEGKEIRTLEGEA---- 83

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 940328420 100 vQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYEN-EQQSLSKDKISDYLSGNLCRCTGYRPILDAAQK 170
Cdd:PRK09908  84 -KGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKpREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLD 154
4hydroxCoAred TIGR03193
4-hydroxybenzoyl-CoA reductase, gamma subunit; 4-hydroxybenzoyl-CoA reductase converts ...
 18-171 5.98e-27

4-hydroxybenzoyl-CoA reductase, gamma subunit; 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.


Pssm-ID: 132237 [Multi-domain]  Cd Length: 148  Bit Score: 106.11  E-value: 5.98e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   18 ENIVP-TMTVLQFLREYTQTgktrqTGTKEGCAEGDCGACTVVIGElvndnlqlRSVNACIQFLPTLDGKALFTVEDLHS 96
Cdd:TIGR03193  12 EDAVAdNMLLVDYLRDTVGL-----TGTKQGCDGGECGACTVLVDG--------RPRLACSTLAHRVAGRKVETVEGLAT 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 940328420   97 llpvqDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSlSKDKISDYLSGNLCRCTGYRPILDAAQKA 171
Cdd:TIGR03193  79 -----NGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRRNPSP-SRDEIRAALAGNLCRCTGYVKIIESVEAA 147
PRK11433 PRK11433
aldehyde oxidoreductase 2Fe-2S subunit; Provisional
 5-167 2.41e-24

aldehyde oxidoreductase 2Fe-2S subunit; Provisional


Pssm-ID: 236910 [Multi-domain]  Cd Length: 217  Bit Score: 101.00  E-value: 2.41e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   5 PITFFFRGGQQQVENIVPTmTVLQFLREYTQTgktrqTGTKEGCAEGDCGACTVvigeLVNDnlqlRSVNACIQFLPTLD 84
Cdd:PRK11433  51 PVTLKVNGKTEQLEVDTRT-TLLDALREHLHL-----TGTKKGCDHGQCGACTV----LVNG----RRLNACLTLAVMHQ 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  85 GKALFTVEDLHsllpvQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYE--------------NEQQSLSKDKISDY 150
Cdd:PRK11433 117 GAEITTIEGLG-----SPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKeikdgipshvtvdlTAAPELTADEIRER 191

                        170
                 ....*....|....*..
gi 940328420 151 LSGNLCRCTGYRPILDA 167
Cdd:PRK11433 192 MSGNICRCGAYSNILEA 208
PRK09800 PRK09800
putative hypoxanthine oxidase; Provisional
 73-171 2.00e-05

putative hypoxanthine oxidase; Provisional


Pssm-ID: 182084 [Multi-domain]  Cd Length: 956  Bit Score: 47.52  E-value: 2.00e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420  73 VNACIQFLPTLDGKALFTVEDLhsllpVQDGTLHPVQQAMVDIHGSQCGFCTPGFIMSLWSMYENEQQSlSKDKISDYLS 152
Cdd:PRK09800  56 VNASLLIAAQLEKADIRTAESL-----GKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAP-TREEIDDALS 129

                         90
                 ....*....|....*....
gi 940328420 153 GNLCRCTGYRPILDAAQKA 171
Cdd:PRK09800 130 GLFSRDAGWQQYYQVIELA 148
fer2 cd00207
2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in ...
 6-77 1.94e-03

2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.


Pssm-ID: 238126 [Multi-domain]  Cd Length: 84  Bit Score: 37.37  E-value: 1.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   6 ITFFFRGGQQQVEnIVPTMTVLQFLREytqTGKTrqtgTKEGCAEGDCGACTV-VIGELVNDNLQL---------RSVNA 75
Cdd:cd00207    1 VTINVPGSGVEVE-VPEGETLLDAARE---AGID----IPYSCRAGACGTCKVeVVEGEVDQSDPSlldeeeaegGYVLA 72


                 ..
gi 940328420  76 CI 77
Cdd:cd00207   73 CQ 74
Fer2_3 pfam13085
2Fe-2S iron-sulfur cluster binding domain; The 2Fe-2S ferredoxin family have a general core ...
 22-101 8.74e-03

2Fe-2S iron-sulfur cluster binding domain; The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which abeta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated.


Pssm-ID: 432963 [Multi-domain]  Cd Length: 107  Bit Score: 36.06  E-value: 8.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940328420   22 PTMTVLQFLreytQTGKTRQTGT---KEGCAEGDCGACTVVIgelvNDnlqlRSVNACIQFLPTLDGKALfTVEDLhSLL 98
Cdd:pfam13085  27 EGMTVLDAL----NKIKEEQDPTlafRRSCREGICGSCAMNI----NG----KPRLACKTLIDDLLGQDI-TLEPL-PGF 92


                  ...
gi 940328420   99 PVQ 101
Cdd:pfam13085  93 PVI 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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