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Conserved domains on  [gi|938339406|ref|YP_009171571|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Mirhipipteryx andensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 1.16e-37

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 123.04  E-value: 1.16e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLCSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 938339406  81 FNSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSWKE 117
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 1.16e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 123.04  E-value: 1.16e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLCSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 938339406  81 FNSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSWKE 117
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-113 4.34e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.57  E-value: 4.34e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   32 EREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNsSNPLTWSFTAFFFIIILLIGLFYEWKEG 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ..
gi 938339406  112 SL 113
Cdd:pfam00507  92 AL 93
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-115 1.69e-26

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 94.80  E-value: 1.69e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   7 LFTLSFMLAAIMMLLCSIISKKTTfEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNSSNP 86
Cdd:COG0838   11 FLLVALGLALAMLLLSRLLGPKRP-NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW 89

                         90       100
                 ....*....|....*....|....*....
gi 938339406  87 LTWsFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:COG0838   90 FGL-IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 1.16e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 123.04  E-value: 1.16e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLCSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 938339406  81 FNSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSWKE 117
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.15e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.19  E-value: 2.15e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   3 LIMNLFTLSFMLAAIMMLLCSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFN 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 938339406  83 SSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 2.55e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 112.01  E-value: 2.55e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLCSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 938339406  81 FNSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 1.49e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 102.63  E-value: 1.49e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLCSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 938339406  81 FNSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 5-117 5.11e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 101.15  E-value: 5.11e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   5 MNLFTLSFMLAAIMMLLCSIIS---KKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTF 81
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSfwlPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 938339406  82 NSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSWKE 117
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 3-115 1.37e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 97.64  E-value: 1.37e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   3 LIMNLFTLSFMLAAIMMLLcSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFN 82
Cdd:MTH00113   2 NLISMLTISLALSTILTTL-NFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 938339406  83 SSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-117 1.93e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 97.32  E-value: 1.93e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTlSFMLAAIMMLLCSIISKKTTFErEKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00106   1 MNLMLTLLT-NTLLASLLVLIAFWLPQLNIYS-EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 938339406  81 FNSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSWKE 117
Cdd:MTH00106  79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 3.02e-27

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 96.59  E-value: 3.02e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLCSIISKKTTfEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 938339406  81 FNSSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSWKE 117
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-113 4.34e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.57  E-value: 4.34e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   32 EREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNsSNPLTWSFTAFFFIIILLIGLFYEWKEG 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ..
gi 938339406  112 SL 113
Cdd:pfam00507  92 AL 93
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-115 1.69e-26

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 94.80  E-value: 1.69e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   7 LFTLSFMLAAIMMLLCSIISKKTTfEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNSSNP 86
Cdd:COG0838   11 FLLVALGLALAMLLLSRLLGPKRP-NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW 89

                         90       100
                 ....*....|....*....|....*....
gi 938339406  87 LTWsFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:COG0838   90 FGL-IEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-117 1.00e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 92.75  E-value: 1.00e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   3 LIMNLFTLSFMLAAIMMLLcSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFN 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITI-SFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQ 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 938339406  83 SSNPLTWSFTAFFFIIILLIGLFYEWKEGSLSWKE 117
Cdd:MTH00069  80 LNTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 14-115 2.21e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 86.84  E-value: 2.21e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406  14 LAAIMMLLCSIISKKTtFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNSSNPLTWsFTA 93
Cdd:PRK06602  21 LGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGF-VEA 98

                         90       100
                 ....*....|....*....|..
gi 938339406  94 FFFIIILLIGLFYEWKEGSLSW 115
Cdd:PRK06602  99 MIFILVLLVGLVYLWRKGALDW 120
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 4.28e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 86.10  E-value: 4.28e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLcSIISKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFI-AFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 938339406  81 FNSSNPLTWSftAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:MTH00203  80 NQLSSLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-115 1.08e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 82.42  E-value: 1.08e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   4 IMNLFTLSFMLAAIMMLLCSIISKKTTfEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNS 83
Cdd:MTH00018   3 LFILLIFSVVLSALFSGASYFLGVKQP-DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQ 81

                         90       100       110
                 ....*....|....*....|....*....|..
gi 938339406  84 SNPLTWsFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:MTH00018  82 IAPFGF-WTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 13-116 3.50e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 78.98  E-value: 3.50e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406  13 MLAAIMMLLCSIISKKTTF-----------EREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTF 81
Cdd:MTH00055   5 FLGIFILLLFSIGLSTVISgasyivgvkqpDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVY 84

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 938339406  82 NSSNPLTWsFTAFFFIIILLIGLFYEWKEGSLSWK 116
Cdd:MTH00055  85 NQIGLFGF-WVMYLFLIILTIGLIYEWVKGGLEWE 118
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 29-115 5.65e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 68.42  E-value: 5.65e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406  29 TTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNSSNPLTWsFTAFFFIIILLIGLFYEW 108
Cdd:MTH00030  37 TKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSF-WIVYTFLIVLAIGLAYEW 115


                 ....*..
gi 938339406 109 KEGSLSW 115
Cdd:MTH00030 116 IKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 6-115 2.93e-15

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 66.16  E-value: 2.93e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   6 NLFTLSFMLAAIMMLLCSIISKKTTFER---EKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFN 82
Cdd:CHL00022   8 DIFWAFLIISSLIPILAFLISGLLAPISkgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFD 87

                         90       100       110
                 ....*....|....*....|....*....|...
gi 938339406  83 SSNpLTWSFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:CHL00022  88 VLG-VSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 4-115 1.26e-13

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 62.00  E-value: 1.26e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   4 IMNLFTLSFMLAAIMMLLCSIISKKTtFEREKMTPFECGFDPKSSARTP--FSIRFFLIAVIFLIFDVEIALLVPFLVTF 81
Cdd:PRK07928   7 ILVLGALAAAFAVVSVVVASLVGPKR-YNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSF 85

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 938339406  82 NSSNplTWSFTAF-FFIIILLIGLFYEWKEGSLSW 115
Cdd:PRK07928  86 DALG--VFGLVEMaLFMLTVFVAYAYVWRRGGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
33-115 2.99e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 55.90  E-value: 2.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406  33 REKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNSSNpLTWSFTAFFFIIILLIGLFYEWKEGS 112
Cdd:PRK07756  40 AAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLG-LFALIEMLIFVVMLLVGLAYAWKKKV 118


                 ...
gi 938339406 113 LSW 115
Cdd:PRK07756 119 LQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
7-115 1.14e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 54.67  E-value: 1.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   7 LFTLSFMLAAIMMLLCSIISKKTT---FEREKMTPFECGFDPKSSARTpFSIRFFLIAVIFLIFDVEIALLVPFLVTFNS 83
Cdd:PRK08489  16 LLVLTFVAFFLTTRLARFISRKLAqknTEKLKLAIYECGPEPVKQPNR-ISSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                         90       100       110
                 ....*....|....*....|....*....|....
gi 938339406  84 snpLTW--SFTAFFFIIILLIGLFYEWKEGSLSW 115
Cdd:PRK08489  95 ---LGLfgLIEMLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 2.14e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 40.26  E-value: 2.14e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406   1 MKLIMNLFTLSFMLAAIMMLLCSIISKKTtFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVT 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 938339406  81 FNSSNPLTWsftafFFIIILLIGLFYEWKEGSLSW 115
Cdd:MTH00092  80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 36-115 1.44e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 38.64  E-value: 1.44e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406  36 MTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNSSNPLTWSFTaFFFIIILLIGLFYEWKEGSLSW 115
Cdd:PRK06432  64 LEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIET-LIFLAMPLFAVYYAFKMGYMRW 142
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 26-115 3.64e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 3.64e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339406  26 SKKTTFEREKMTPFECGFDPKSSARTPFSIRFFLIAVIFLIFDVEIALLVPFLVTFNSSNPLTWSftaFFFIIILLIGLF 105
Cdd:MTH00060  28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFYNFWYY---YFFLLLLFLGFV 104

                         90
                 ....*....|
gi 938339406 106 YEWKEGSLSW 115
Cdd:MTH00060 105 VELFSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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