|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
8.15e-78 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 241.65 E-value: 8.15e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 1 MQLNSTNLVFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHF 80
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 81 PL-FPTSFINQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSlTTFSMIIIILSITSGAL 159
Cdd:MTH00160 81 NLmLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLIN-NNFIIIIIILSAIIGAI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 160 GGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVKLLIMIN 239
Cdd:MTH00160 160 GGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLN 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 240 LLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRLAFSSFLISSSTSSFMMASNpatplhsKWEMS 319
Cdd:MTH00160 240 LLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKK-------KNKFS 312
|
330 340
....*....|....*....|...
gi 938339400 320 LTVYFTLTMSIMGLSLTSWSIYL 342
Cdd:MTH00160 313 LILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
6-289 |
8.97e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 193.12 E-value: 8.97e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 6 TNLVFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLN------- 78
Cdd:MTH00112 5 AKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNawntgqw 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 79 --HFPLFPTSFInqALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPF--MVISYCLSLTTFSMIIIILSI 154
Cdd:MTH00112 85 diTQLTNPTSCT--LLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLtlLLMTSNSLNPTLLLTLAILST 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 155 TSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVKL 234
Cdd:MTH00112 163 LIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNT 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 938339400 235 LIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRLA 289
Cdd:MTH00112 243 TLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLT 297
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
12-288 |
7.29e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 182.74 E-value: 7.29e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 12 LSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLN-----HFPLFPTS 86
Cdd:MTH00105 11 LTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINlmysgQWTITKLT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 87 fiNQALSS----AILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPfMVISYCLSLTTFSMIIIILSITS---GAL 159
Cdd:MTH00105 91 --NPTASTlmtiALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAP-LSILYQISPSINPNLLLTLAILSiliGGW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 160 GGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILiwsFYFFNLN------MISQLFNYGAhynLVK 233
Cdd:MTH00105 168 GGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTM---FMLLMLNsstttlSLSHTWNKTP---LMT 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 938339400 234 LLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:MTH00105 242 SLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRL 296
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
5-289 |
8.02e-53 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 177.82 E-value: 8.02e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 5 STNLVFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHF---- 80
Cdd:MTH00041 4 NVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWlsgs 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 81 -----PLFPTSFInqALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSLTTFSMIII--ILS 153
Cdd:MTH00041 84 wsingPLNTLSSI--IITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILcgILS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 154 ITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVK 233
Cdd:MTH00041 162 VLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISA 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 938339400 234 LLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRLA 289
Cdd:MTH00041 242 FLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRIS 297
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
9-289 |
8.64e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 174.72 E-value: 8.64e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 9 VFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHFPL------ 82
Cdd:MTH00070 8 ILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTgewtim 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 83 -FPTSFINQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPfMVISYCLSLTTFSMIIIILSITS---GA 158
Cdd:MTH00070 88 nMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAP-MALLIQISHLLNSNLLIIMGLLStliGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 159 LGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVKLLIMI 238
Cdd:MTH00070 167 WGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMML 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 938339400 239 NLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRLA 289
Cdd:MTH00070 247 TLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLS 297
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
9-288 |
9.45e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 169.60 E-value: 9.45e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 9 VFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHF-------- 80
Cdd:MTH00135 8 ILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWltgqwdiq 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 81 ----PLfPTSFINQALSsailLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVIsyCLSLTTFSMIIIILSITS 156
Cdd:MTH00135 88 qmshPL-PTTMITLALA----LKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALI--LQIAPTNPTLLITLGLTS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 157 ---GALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVK 233
Cdd:MTH00135 161 tlvGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALT 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 938339400 234 LLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:MTH00135 241 ALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRL 295
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
8-336 |
5.87e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 167.45 E-value: 5.87e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 8 LVFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHF------- 80
Cdd:MTH00200 7 PLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWtsgqwgi 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 81 PLFPTSFINQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVIS--YCLSLTTFSMIIIILSITSGA 158
Cdd:MTH00200 87 SEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIqlAPALNSNILLLLGLLSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 159 LGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVKLLIMI 238
Cdd:MTH00200 167 WGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 239 NLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRLAFSSFLISSSTSSFMMASNPATPLHSKWEM 318
Cdd:MTH00200 247 TLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVG 326
|
330
....*....|....*...
gi 938339400 319 SLTVYFTLTMSIMGLSLT 336
Cdd:MTH00200 327 LLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
7-286 |
1.94e-47 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 163.13 E-value: 1.94e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 7 NLVFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHFPLFpTS 86
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSF-SW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 87 FINQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSLTTFSMIIIILSITS---GALGGLN 163
Cdd:MTH00144 85 FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLSalvGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 164 QTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNyGAHYNLVKLLIMINLLSL 243
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGS-LKPSYKTGLSIISLLLSL 243
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 938339400 244 GGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYL 286
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYL 286
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-308 |
1.30e-45 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 157.91 E-value: 1.30e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 9 VFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHFPLFPTSFI 88
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 89 NQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSLTTFSMIIIILSITSGALGGLNQTSTR 168
Cdd:MTH00197 82 VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSNIR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 169 KIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVKLLIMINLLSLGGLPP 248
Cdd:MTH00197 162 QLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPP 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 249 FMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRLAFSSFLISSSTSSFMMASNP 308
Cdd:MTH00197 242 LSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINL 301
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
6-288 |
2.85e-43 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 152.24 E-value: 2.85e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 6 TNLVFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHF-PLFP 84
Cdd:MTH00011 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSfPSLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 85 TSFINQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSLTTFSMIIII--LSITSGALGGL 162
Cdd:MTH00011 87 KNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMaaMSALAGGLGGM 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 163 NQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVKLLIMINLLS 242
Cdd:MTH00011 167 NQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLS 246
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 938339400 243 LGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:MTH00011 247 LGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL 292
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-288 |
1.70e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 103.66 E-value: 1.70e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 9 VFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLI-MSKPNVLSTDSSIKYFIIQALASSTLLLFITLN-------HF 80
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLygatgslNL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 81 PLFPTSFINQALSSAILL------------KMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVI---------SYC 139
Cdd:COG1007 186 AGIAAALAAGGANSPLLLlglvlvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafpGLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 140 LSLTTFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLW----MIYFMIYSIINL-----ILIWS 210
Cdd:COG1007 266 ADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGvsaaLFYLLAYLFMNLgafavILLLS 345
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339400 211 FYFFNLNMISQLFNYGAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:COG1007 346 RKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-278 |
7.08e-23 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 96.61 E-value: 7.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 24 ASSWFGVWMGLEINLLSFIPLI-MSKPNVLSTDSSIKYFIIQALASSTLL-----------------LFITLNHFPLFPT 85
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLfgislmynytgtlsfdeLSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 86 SFINQ-ALSSAILLKMGAGPFFFWFPEVMEGLSWLNS-FTLLTWQKLAPFMVISYCLSLTTFS-------MIIIILSITS 156
Cdd:pfam00361 81 LLLLFlLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSaLLAATLVKAGGYGLIRRSLLYLPSSpfiqqilLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 157 GALGGLNQTSTRKIMAFSSINHMGWMLMAISLSD----SLWMIYFMIYSIINLILIWSFYFFNLNMISQ--LFNYGAHYN 230
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 938339400 231 ---LVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMS 278
Cdd:pfam00361 241 tmpILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
9-288 |
9.54e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 98.55 E-value: 9.54e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 9 VFVLSLIIGSIMSISASSWFGVWMGLEINLLS-FIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFITLNHFPLFPTSF 87
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTlFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 88 --INQALSS---------AILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSLTTFSMIIIILSITS 156
Cdd:MTH00199 181 qgINSILTGdvgkilitiSLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVLSIIY 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 157 GALGGLNQTSTRKIMAFSSINHMGWMLMAI------SLSDSL-WMIYFMIYSIINLILIWSFYFfNLNMISQLFNYGAHY 229
Cdd:MTH00199 261 GAIGALNQTKIKRLLAYSGIGHMGFILFGVaigsfeSIQASLiYMIIYVIMSICSFSIILSLKL-TKGLIVEVSGLSRKN 339
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 938339400 230 NLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:MTH00199 340 PVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
14-288 |
5.27e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 95.48 E-value: 5.27e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 14 LIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPN-VLSTDSSIKYFIIQALASSTLLLFITL--------------- 77
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLKYFVLGALSSGLFLFGCALlcgttgglhlsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 78 -----NHFPLFPTSFINQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSLTTFSMIIIIL 152
Cdd:MTH00196 82 vlnsgQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 153 SITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISL----SDSLWMIYFMIYSIINlILIWSF---YFFNLNMISQLFNY 225
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMS-ICVFSIilaLNVYKNLIIEFSGL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339400 226 GAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:MTH00196 241 SRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
9-288 |
1.61e-20 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 92.19 E-value: 1.61e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 9 VFVLSL--IIGSIMSISASSWFGVWMGLEINLLSFIPLI-MSKPNVLSTDSSIKYFIIQALASSTLLLFITL-------- 77
Cdd:PRK05777 105 FYLLVLfaLLGMMVMVSANDLLTLFLGLELLSLPLYALAaLRRDRRRSLEAAIKYFVLGALASGFLLYGMSLlygatgsl 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 78 -------------NHFPLFPTSFInqALSSAILLKMGAGPFFFWFPEVMEGLSwlNSFTLL--TWQKLAPFMVI------ 136
Cdd:PRK05777 185 sfagiakaladgsGNSLLLLFGLV--FLLVGLAFKLSAVPFHMWTPDVYEGAP--TPVTAFlaTAPKIAAFAVLlrllvv 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 137 ---SYCLSLTTFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSL----WMIYFMIYSIINL---- 205
Cdd:PRK05777 261 afgGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLgafg 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 206 -ILIWSFYFFNLNMISQLFNYGAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFF 284
Cdd:PRK05777 341 vISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFY 420
|
....
gi 938339400 285 YLRL 288
Cdd:PRK05777 421 YLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
15-289 |
9.66e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 83.84 E-value: 9.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 15 IIGSIMSISASSWFGVWMGLEINLLSFIPLI-MSKPNVLSTDSSIKYFIIQALASSTLLLFITL-----------NHFPL 82
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAgLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLiygftgslnfeDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 83 FPTSFINQAL--------SSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVI---------SYCLSLTTF 145
Cdd:TIGR01770 192 LSNGMLNISLlllgivliLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlflyilfGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 146 SMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWM----IYFMIYSIINL---ILIWSFYFFNLNM 218
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkavlFYIFIYALMSLgafGVLSLLRSYKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339400 219 ISQLFNYGA---HYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRLA 289
Cdd:TIGR01770 352 IEYISDFAGlfkTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
6-288 |
2.23e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 67.96 E-value: 2.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 6 TNLVFVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPL---------IMSKPNVLSTDSSIKYFIIQALASSTLLLFIT 76
Cdd:MTH00198 189 SGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILagegsqpgsHFPSPGNTPPESGLKYWILGAMSSGFYLFGCA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 77 L---------------------NHFPLFPTSFINQALSSAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMV 135
Cdd:MTH00198 269 LyfgftgnegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYIL 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 136 ISYCLSLTTFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISL-------SDSLWMIYFMIYSIINLILI 208
Cdd:MTH00198 349 LTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAgtyeslqASWTYAVTYLVSALASFTVI 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 209 WSFYFFNLNMISQ------LFNYGAHYNLVKLLIM------------INLLSLGGLPPFMGFFPKWMILQSMLQL----N 266
Cdd:MTH00198 429 CTLEEFGTRTPTSrqrdgsFGNYNLVRRLVDLTILsrgqpyiafslaIVFLSLAGIPPLLGFLGKWFILVGSIKIafssS 508
|
330 340
....*....|....*....|....*
gi 938339400 267 LMILSMVML---IMSIITVFFYLRL 288
Cdd:MTH00198 509 LSIYYLVALfaiICTCISAFYYIRI 533
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
10-288 |
7.18e-12 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 65.94 E-value: 7.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 10 FVLSLIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLSTDSSIKYFIIQALASSTLLLFI--------TLN--- 78
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVgllygatgTLNmad 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 79 ---HFPLFPTSFINQALSSAIL---LKMGAGPFFFWFPEVME----GLSWLNSFTLLtwqKLAPFMVI---------SYC 139
Cdd:COG0651 192 laaRLAELDPGLLLAAFALLLVgfgIKAALFPLHFWLPDAYPaapsPVSALLSGLLT---KVGVYAILrvltllfgaDPA 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 140 LSLTTFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLwMIYFMIYSIINLILIWSFYFF----- 214
Cdd:COG0651 269 LFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPL-GLAGALFHLLNHALAKALLFLaagai 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339400 215 ----NLNMISQLFNYGAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:COG0651 348 eratGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
142-288 |
1.15e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 62.30 E-value: 1.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 142 LTTFSMIIIILSITSGALGGLN---QTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYsIINLILIWSFYFFNLNM 218
Cdd:PRK12667 291 RAALSPILIILGAVSAIIGALMmvvQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFH-IINHAIAKSLLFLASGV 369
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938339400 219 ---------ISQLFNYGAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:PRK12667 370 fihaagtrdIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRA 448
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
140-288 |
6.67e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 59.89 E-value: 6.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 140 LSLTTFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWM----IYFMIYSIINLILIWS----F 211
Cdd:PRK08375 268 LGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALaaglLHLLHHALMKGALFLAagaiE 347
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 938339400 212 YFFNLNMISQLFNYGAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:PRK08375 348 VTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRI 424
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
94-287 |
4.40e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 57.75 E-value: 4.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 94 SAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPF------MVISYCLSLTTFSMIIIILSITSGALG---GLNQ 164
Cdd:PRK02504 218 AGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFalairlLVTAFPSFDEQWKLLFTALAILSMVLGnvvALAQ 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 165 TSTRKIMAFSSINHMGWMLMAISLSD----SLWMIYFMIYSIINLILIWSFYFFNLNMIS-QLFNYGAHYN---LVKLLI 236
Cdd:PRK02504 298 TSMKRMLAYSSIGQAGFVMIGLVAGTeagyASMVFYLLAYLFMNLGAFACVILFSLRTGTdQISDYAGLYQkdpLLTLGL 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 938339400 237 MINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLR 287
Cdd:PRK02504 378 SLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIR 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
148-288 |
7.32e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.80 E-value: 7.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 148 IIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWM---IYFMIYSIInlilIWSFYFF---NLNMISQ 221
Cdd:PRK12663 277 TMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGIngaIFYLVHDMV----VKTALFLiagSLVRLTG 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339400 222 LFNYGAHYNLVK------LLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:PRK12663 353 YRSLQYLGGLYRkeplfgALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
148-288 |
1.64e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 52.70 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 148 IIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLW-----MIYFMIYSIINLILIWSFYFFNLNM-ISQ 221
Cdd:CHL00049 285 ILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDgyasmITYMLFYIFMNLGTFACIVLFGLRTgTDN 364
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 222 LFNYGAHYN---LVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:CHL00049 365 IRDYAGLYTkdpFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-287 |
7.88e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 50.48 E-value: 7.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 55 DSSIKYFIIQALASSTLLLFI--------TLN--------HFPLFPTSFINQAL-SSAILLKMGAGPFFFWFPEVM-EGL 116
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGIallygqygTLNmaylavkmSENPTVVAKIALALfIAGLAMKSGAVPVHMWLPDAYpAAP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 117 SWLNSFTLLTWQK------LAPFMVISYCLSLTTFSMIIIILSITSGALG---GLNQTSTRKIMAFSSINHMGWMLMAI- 186
Cdd:PRK08376 252 SSISAMLLVIKQAglyalaRVLFSIYGPAINLATVGWVIIILGCLTMFVGvamAVVQKDVKRLLAYHSVSQIGYMLLGLg 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 187 ----SLSDSLWMIYFM------IYSIINLILIWSFYFF------------NLNMISQLfnyGAHYNLVKLLIMINLLSLG 244
Cdd:PRK08376 332 vglaALGDPAMASYGEialaggIYHIVNHALYKALLFLtagaviyetgtrNLNELGGL---ARTMPKTTIAFLIGAAAIV 408
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 938339400 245 GLPPFMGFFPKWMILQSMLQLNlMILSMVMLIMSIITVFFYLR 287
Cdd:PRK08376 409 GLPPFNGFASKWLIYESSALFN-PILGVIAMIGSVLTLASFVK 450
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
142-287 |
1.14e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.03 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 142 LTTFSMIIIILSITSGALG---GLNQTSTRKIMAFSSINHMGWMLMAISLSDSLwMIYFMIYSIINLILIWSFYFFNLNM 218
Cdd:PRK06277 262 FPSAQGVLIALSVLAMVFGvvmALLQTDYKRLLAYHAISQGGYVAAGLALGTPL-GIVAGIFHAINHVIYKSALFLGAGI 340
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339400 219 ISQLFNYG---------AHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLR 287
Cdd:PRK06277 341 VSYRTKTSnlrklggllPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMK 418
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-261 |
4.47e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 4.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 141 SLTTFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYfMIYSIINLILIWSFYFFNLNMI- 219
Cdd:PRK12665 271 GLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSG-AIYYVAHHITVQTTLFLVVGLIe 349
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 938339400 220 --------SQLFNYGAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQS 261
Cdd:PRK12665 350 rqagssslRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
144-288 |
2.99e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 45.71 E-value: 2.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 144 TFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYfMIYSIINLILIWSFYFFNLNMISQLF 223
Cdd:PRK07691 276 YLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIG-AIYYLIHDMIVKAALFLLIGIMIKIT 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339400 224 NYG---------AHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:PRK07691 355 GTTdlkkmggliKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
144-284 |
4.68e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.13 E-value: 4.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 144 TFSMIII---ILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLwMIYFMIYSIINLILIWSFYFFNLNMIS 220
Cdd:PRK08676 271 QFSNVLIglgIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPL-ALFWMLFHMLAHSLVKSGLFFSAGILH 349
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339400 221 QLFNYGAHYNLVKLL---------IMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFF 284
Cdd:PRK08676 350 RQYRSDRFDRIFDVFrlqpvaawgVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSF 422
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
14-277 |
5.29e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 44.09 E-value: 5.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 14 LIIGSIMSISASSWFGVWMGLEINLLSFIPLIMSKPNVLStdssikYFIIQALASSTLLLFiTLNHFPLFptsfinqals 93
Cdd:MTH00091 3 LSLLNFMSLNIFVWWSVFLLMTLLFVFLNKGMGSYSSLFN------YFVLQESLGLLFLLF-SFGYFQFL---------- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 94 sAILLKMGAGPFFFWFPEVMEGLSWLNSFTLLTWQKLAPFMVISYCLSLTTFSMIIIILSITsgalgglnqtstrkIMAF 173
Cdd:MTH00091 66 -ILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLIC--------------FFQM 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 174 SSINHMGWMLMAISLSDSLWMIYFMIYSIINLILIWSFYFFNLNMISQLFNYGAHYNLVKLLIMINLLSlggLPPFMGFF 253
Cdd:MTH00091 131 FLLKSYKNLLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVSWETLLVFMN---LPFSVTFF 207
|
250 260
....*....|....*....|....
gi 938339400 254 PKWMILQSMLQLNLMILSMVMLIM 277
Cdd:MTH00091 208 VKIFSLSEILKVLGFFLLFLLFLM 231
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
141-286 |
6.19e-05 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 44.60 E-value: 6.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 141 SLTTFSMIIIIL---SITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLwMIYFMIYSIINLILIWSFYFFNL- 216
Cdd:PRK08668 267 GVPLFNYILAWLgniSIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSL-GFAGGLFHVFNHALFKGLFFLIFa 345
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339400 217 --------NMISQLFNYGAHYNLVKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITvFFYL 286
Cdd:PRK08668 346 aviyrtgtTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGS-FLYV 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
104-288 |
6.01e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 41.68 E-value: 6.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 104 PFFFWFPEVMEG----LSWLNSFTLLtwqKLAPFMVI----SYCLSLTTFSMIIIILSITS--GALGGLNQTSTRKIMAF 173
Cdd:COG1009 229 PLHFWLPDAMEGptpvSALLHAATMV---KAGVYLLArlspLFALSPVWLTVVAIIGAITAlfAALIALAQTDIKRVLAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 174 SSINHMGWMLMAISLSDSLWMIYFMIY-------------SIInliliwsfyffnLNMISQ-LFNYGahyNLVK------ 233
Cdd:COG1009 306 STVSQLGYMFLALGVGAYVAALFHLLThaffkallflgagSVI------------HATGTRdIRKMG---GLRKkmpita 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 938339400 234 LLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNL--MILSMVMLIMSIITVFFYLRL 288
Cdd:COG1009 371 ITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGAFLTAFYSFRL 427
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
140-288 |
4.04e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 38.95 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339400 140 LSLTTFSMIIIILSITSGALGGLNQTSTRKIMAFSSINHMGWMLMAISLSDSLWMIYFMIYsIINLILIWSFYFFNLNMI 219
Cdd:PRK12662 276 LPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAY-IVNHSIVKSALFMVSGSI 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339400 220 SQLFNYGAHYNL---------VKLLIMINLLSLGGLPPFMGFFPKWMILQSMLQLNLMILSMVMLIMSIITVFFYLRL 288
Cdd:PRK12662 355 SYHFGTTKLEDClnlwksmpkITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
|