|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
6.28e-167 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 476.57 E-value: 6.28e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIPLCFMKNFWWVVQSLMFLMSFSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMASELVF 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 81 RYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFD 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 161 VYELVDTLYIPLLDGKSVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLIL 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 241 SGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 321 SYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLYA 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 938339286 401 FSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGESCMMW 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
33-446 |
1.17e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 334.89 E-value: 1.17e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 33 FSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMASELVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSF 112
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 113 YLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYEL---VDTLYIPLLDGKSVIGFIVYLSLIG 189
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSygsSFMLLISSLRKLLSSMGLWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 190 AFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTD 269
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 270 LKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFL 349
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 350 LSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHW 429
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|....*..
gi 938339286 430 FPLNVLVLKGESCMMWL 446
Cdd:MTH00150 401 VPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-446 |
1.28e-110 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 333.63 E-value: 1.28e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIPLCFMKNFWWVVQS---LMFLMSFSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 78 LVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 158 LFDVYELVDTLYIPLLDGKSVIGFIV---YLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMnlwWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 235 YKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 315 FCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 938339286 395 TLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGESCMMWL 446
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-443 |
1.09e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 331.17 E-value: 1.09e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 5 MFMLLFLIPLCFMKNFWWVVQSLMFLMSFSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMASELVFRYKN 84
Cdd:MTH00205 6 VFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 85 YQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYEL 164
Cdd:MTH00205 86 NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 165 VDTL-YIPLLDGKSVI--GFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILS 241
Cdd:MTH00205 166 NFSLsMFFNFPLNFSDfyLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 242 GLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANIS 321
Cdd:MTH00205 246 NSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 322 YERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLYAF 401
Cdd:MTH00205 326 YERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQ 405
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 938339286 402 SQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGESCM 443
Cdd:MTH00205 406 SQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
2.54e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 325.23 E-value: 2.54e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIP---LCFMKNFWWVVQSLMFLMS-FSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMAS 76
Cdd:MTH00124 1 MLKIILPTIMLIPttlLSKPKFLWTNTTTYSLLIAlLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 77 E--LVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPL 154
Cdd:MTH00124 81 QnhLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 155 LIGLFDVYELVDTLYIPLLDGK------SVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGG 228
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLThptltnSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 229 YGLLRVYKVL--ILSGLKYNFIwvGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIA 306
Cdd:MTH00124 241 YGIIRITLLLppLSNTLHYPFL--TLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 307 HGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLML 386
Cdd:MTH00124 319 HGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 938339286 387 LSFFSAVYTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGE 440
Cdd:MTH00124 399 ATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPE 452
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-443 |
2.01e-102 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 312.68 E-value: 2.01e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIPLCFMKNFWW---VVQSLMFLMSFSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMASE 77
Cdd:MTH00044 3 TLILLSLGIAITSWIVPKNKLWpisISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 78 --LVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLL 155
Cdd:MTH00044 83 nhLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 156 IGLFDVYELVDTLYIPLLDGKSVIGF------IVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGY 229
Cdd:MTH00044 163 ISLIAIYSSSSSLSIPLSELNWLTSLssnsssIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 230 GLLRVYKVLILSGLKY-NFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHG 308
Cdd:MTH00044 243 GLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 309 LCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLS 388
Cdd:MTH00044 323 LVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLAT 402
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 938339286 389 FFSAVYTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGESCM 443
Cdd:MTH00044 403 VFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
1.18e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 302.99 E-value: 1.18e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMF---MLLFLIPLCFMKNFWWVV--QSLmFLMSFSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMA 75
Cdd:MTH00068 1 MLKIIIptlMLLPTTWLSPKKWLWTLTttNSL-IIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 76 SE--LVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLP 153
Cdd:MTH00068 80 SQnhLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 154 LLIGLFDVYELVDTLYIPLLDGKSVIGFIVYLSLI------GAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIwwlaclLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 228 GYGLLRVYKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 308 GLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 938339286 388 SFFSAVYTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGE 440
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPE 452
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-442 |
5.78e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 295.70 E-value: 5.78e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIPLCFMKNFWWVVQSLMFLMSFSFLFVCILFLGVG--NLSYIFGCDILSFGLILLSFWVCSLMIMASE- 77
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGwsFSNLYLSYDPLSSPLVILSCWLLPLMFLASQn 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 78 -LVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLI 156
Cdd:MTH00206 82 hMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 157 GLFDVYELVDTLYIPLLDGKSV---IGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLR 233
Cdd:MTH00206 162 ALLFLQNSLGSLSLYILYFSKLttwNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 234 VYKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSG 313
Cdd:MTH00206 242 IILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 314 LFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAV 393
Cdd:MTH00206 322 LFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 938339286 394 YTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGESC 442
Cdd:MTH00206 402 YSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.15e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 287.56 E-value: 1.15e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIPLCFM--KNFWWV-VQSLMFLMSFSFLFVCILFLGVG-NLSYIFGCDILSFGLILLSFWVCSLMIMAS 76
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLskNNMIWInTTTYSLLISLISLLLLNQPNDNSlNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 77 ------ELVFRYKNYqgffLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLA 150
Cdd:MTH00110 81 qhhlskEPLTRKKLY----ITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 151 SLPLLIGLFDVYELVDTLYIPLLD------GKSVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLL 224
Cdd:MTH00110 157 SLPLLVALLYIQNNLGSLNFLLLQlwaqplPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 225 KLGGYGLLRVYKVL--ILSGLKYNFIWvgISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFT 302
Cdd:MTH00110 237 KLGGYGMMRITIILnpLTEFMAYPFLM--LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 303 LMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMM 382
Cdd:MTH00110 315 LMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITII 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 938339286 383 MLMLLSFFSAVYTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVL 437
Cdd:MTH00110 395 LMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
4.07e-84 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 265.67 E-value: 4.07e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIPLCFMKNFWW-----VVQSLMFLMSFSFLFVCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWlwtttLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 76 SE--LVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLP 153
Cdd:MTH00127 81 SQnhTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 154 LLIGLFDVYELVDTL------YIPLLDGKSVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 228 GYGLLRVYKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 308 GLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 938339286 388 SFFSAVYTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPLNVLVLKGEscMMW 445
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPE--LIW 456
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
4.98e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 179.43 E-value: 4.98e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 106 SMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLDGKSVIG----- 180
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 181 -FIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIWVGISLVGGVL 259
Cdd:pfam00361 81 lLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 260 VSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLA-NISYERLGSRSLLINKGLMN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 938339286 339 YMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
29-399 |
6.92e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 171.01 E-value: 6.92e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 29 FLMSFSFLFVCILFLGVGNLsyIFGCDILSFGLILLSFWVCSLMIMASELVFRYKNYQgfFLFMVIFLMLMLYCTFSSMS 108
Cdd:MTH00204 58 FINLIEWIISPTLNFQWGPL--VFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKE--FLLCLLFLEVLLIGVFSVLD 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 109 LFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLDGKSVIGFIVYLSLI 188
Cdd:MTH00204 134 LLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLV 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 189 GAFL---VKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRV-YKVLILSGLKYNFIWVGISLVGGVLVSLVC 264
Cdd:MTH00204 214 GFFLslaVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 265 LRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMA 344
Cdd:MTH00204 294 CRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFV 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 938339286 345 LWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLY 399
Cdd:MTH00204 374 IIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
47-399 |
7.00e-48 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 171.03 E-value: 7.00e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 47 NLSYIFGCDILSFGLILLSFWVCSLMIMASElvFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFL 126
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASW--NEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 127 ILGWGYqPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTL---YIPLLDGK--SVIGFIVYLSLIGAFLVKMPMFLVH 201
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdIAELAAAPlpLTAQLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 202 LWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIWVGI-SLVGGVLVSLVCLRQTDLKALIAYSSVA 280
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAAlGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 281 HMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPS 360
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350
....*....|....*....|....*....|....*....
gi 938339286 361 LNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLY 399
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
31-399 |
5.33e-45 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 163.19 E-value: 5.33e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 31 MSFSFLFVCILFLGVgnlSYIFGCDILSFGLILLSFWVCSLMIMASELVFryKNYQGFFLFMVIFLMLMLYCTFSSMSLF 110
Cdd:TIGR01972 55 FQFTEDIPWIPALGI---SYHLGVDGISLLLVLLTALLTLLAILASWESI--QKRVKEFYALLLLLEAGVIGVFLALDLF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 111 SFYLFFEGSLIPTLFLILGWGyQPERLQAGIYLLFYTLLASLPLLIGL----FDVYELVDTLYIPLLDGKSVIGFIVYLS 186
Cdd:TIGR01972 130 LFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAIlglyFLGGGTFDLLELLNLPLPFGVQTWLFLA 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 187 LIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIWVGI-SLVGGVLVSLVCL 265
Cdd:TIGR01972 209 FFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIAL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 266 RQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMAL 345
Cdd:TIGR01972 289 AQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAA 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 938339286 346 WWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLY 399
Cdd:TIGR01972 369 FFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
51-398 |
1.68e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 157.01 E-value: 1.68e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 51 IFGCDILSFGLILLSFWV--CSLMIMASELVFRYKNyqgfFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPtLFLIL 128
Cdd:MTH00226 97 VFAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIP-MYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 129 G-WGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTL-YIPLLDGKSVIG----FIVYLSLIGAFLVKMPMFLVHL 202
Cdd:MTH00226 172 GiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSHVVSeqtqKWIFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 203 WLPSAHVEAPVSGSMILAGVLLKLGGYGLLRV-YKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAH 281
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 282 MGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSL 361
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350
....*....|....*....|....*....|....*..
gi 938339286 362 NLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFL 398
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
3.10e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 155.60 E-value: 3.10e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 89 FLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPtLFLILG-WGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDT 167
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 168 LYIPLLDGKSVIGFIVYLSLIGAFL---VKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLK 244
Cdd:MTH00217 190 TDYQALCCLKIEKELQYFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 245 Y--NFIWVgISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISY 322
Cdd:MTH00217 270 YfsPLIQT-LSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLY 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 938339286 323 ERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLY 399
Cdd:MTH00217 349 ERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
47-399 |
6.89e-41 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 152.28 E-value: 6.89e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 47 NLSYIFGCDILSFGLILLSFWVCSLMIMASELVFryKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFL 126
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVLASWEEI--KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 127 ILGWGYqPERLQAGIYLLFYTLLASLPLLIGLFDVYELVD----TLYIPLLDGKSVIGFIVYLSLIG---AFLVKMPMFL 199
Cdd:PRK05846 151 IGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYnatgTFDIADLLNLPLPPGVQYWLFLAffiAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 200 VHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLR-VYKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSS 278
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 279 VAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAP 358
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 938339286 359 PSLNLLGE----IGLLNSLVMWSSVSMMMLMLlsffSAVYTLFLY 399
Cdd:PRK05846 390 GTSGFVGEflilLGSFQVNPVIAFIATTGLIL----AAVYSLWLY 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
33-435 |
2.01e-35 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 135.42 E-value: 2.01e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 33 FSFLFVCILFLGVGNLSYIFgcdiLSFGLILLSFWVCSLMIMASELVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSF 112
Cdd:MTH00094 12 FFLFLMFFSFLMFNNYSWSG----LFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSNMLML 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 113 YLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLldgksVIGFIVYLSLIGAFL 192
Cdd:MTH00094 88 YMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDF-----FLSWEMFFILSLSFM 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 193 VKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLilsGLKYNFIWVGISLVGGVLVSLVCLRQTDLKA 272
Cdd:MTH00094 163 MKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL---NFVYNNFWIIFSLLGMILSSFCCVFQSDSKS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 273 LIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSS 352
Cdd:MTH00094 240 LAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 353 SNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFLYAFSQHGTIYSGVYTCSTGYTREYLLLFLHWFPL 432
Cdd:MTH00094 320 SNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWL 399
|
...
gi 938339286 433 NVL 435
Cdd:MTH00094 400 SLF 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-352 |
2.89e-28 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 116.67 E-value: 2.89e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 48 LSYIFGCDILSFGLILLSFWVCSLMIMASELVFRYKNyqgffLFMviFLMLMLYCT----FSSMSLFSFYLFFEGSLIPT 123
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKPR-----LFY--FLMLVLYSAqigvFLAQDLLLFFLMWELELVPV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 124 LFLILGWGYQpERLQAGIYLLFYTLLASLPLLIGLFDV--YELVDTLYIPLLDGKSV---IGFIVYLSLIGAFLVKMPMF 198
Cdd:PRK12561 124 YLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALalSGDTFTFDLAELGAKSYplaLELLLYAGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 199 LVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRvYKVLILSGLKYNF--IWVGISLVGGVLVSLVCLRQTDLKALIAY 276
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIR-FNVQMLPDAHVYFapALAILGVVNIIYGALNAFAQDNVKRRLAY 281
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 938339286 277 SSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMP-TMALwwFLLSS 352
Cdd:PRK12561 282 SSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPkTFAL--FTASS 356
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-397 |
1.40e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 113.70 E-value: 1.40e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 52 FGCDILSFGLILLSFWVCSLMIMASELVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 132 YqPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLDGK-----SVIGFIVYLSLIGAFLVKMPMFLVHLWLPS 206
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARlaeldPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 207 AHVEAPVSGSMILAGVLLKLGGYGLLRVYkVLILSGLKYNFIW---VGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMG 283
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVL-TLLFGADPALFLGtllLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 284 IVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNL 363
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350
....*....|....*....|....*....|....
gi 938339286 364 LGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLF 397
Cdd:COG0651 390 VSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFV 423
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-393 |
1.92e-23 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 102.72 E-value: 1.92e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 52 FGCDILSFGLILLSFWVCSLMIMASELVFRykNYQGFFlfmviFLMLMLYC----TFSSMSLFSFYLFFEGSLIPTLFLI 127
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTR--NSRLFY-----FLMLAMYSgqigLFSSRDLLLFFIMWELELIPVYLLL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 128 LGWGYQpERLQAGIYLLFYTLLASLPLLIGLFDVyelvdTLY---IPLLDGKSVIG--------FIVYLSLIGAFLVKMP 196
Cdd:CHL00011 153 SMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM-----GLYgsnEPTLNFETLANqsypvaleILFYIGFLIAYAVKLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 197 MFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIW-VGISLVGGVLVSLVCLRQTDLKALIA 275
Cdd:CHL00011 227 IIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 276 YSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNM 355
Cdd:CHL00011 307 YSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASL 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 938339286 356 AAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAV 393
Cdd:CHL00011 387 ALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
1.97e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 99.39 E-value: 1.97e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 48 LSYIFGCDILSFGLILLSFWVCSLMIMASELVFrykNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESI---QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 128 LGWGYQpERLQAGIYLLFYTLLASLPLLIGLFDVYELVDT---LYIPLLDGKSVIG--FIVYLSLIGAFLVKMPMFLVHL 202
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGAssfDYEPLRSHTLPLStqLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 203 WLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIWVGISLVGGVLVSLVC-LRQTDLKALIAYSSVAH 281
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 938339286 282 MGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMN 338
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-358 |
5.18e-22 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 98.24 E-value: 5.18e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 48 LSYIFGCDILSFGLILLSFWVCSLMIMASELV-FRYKnyqgfflfMVIFLMLMLY----CTFSSMSLFSFYLFFEGSLIP 122
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPVtFKPK--------LFYFLMLAMYggqiAVFAVQDMLLFFLAWELELIP 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 123 TLFLILGWGYQpERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTL---YIPLLDGKSVIGF--IVYLSLIGAFLVKMPM 197
Cdd:PRK02546 151 VYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPtfdMTALAAKDFGLGFqlLCYAGLLIAYGVKLPI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 198 FLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRV-YKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAY 276
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 277 SSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMA 356
Cdd:PRK02546 310 SSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLA 389
|
..
gi 938339286 357 AP 358
Cdd:PRK02546 390 LP 391
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-397 |
6.66e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 88.78 E-value: 6.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 52 FGCDILSFGLILLSFWVCSLMIMASELVFRYKnyQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHR--QTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 132 YQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLL------DGKSVIGFIVylsLIGAFLVKMPMFLVHLWLP 205
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaeNPTVVTAFGF---VLLALALKAAVFPLHTWLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 206 SAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVL----ILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAH 281
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 282 MGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSL 361
Cdd:PRK08375 307 MGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 938339286 362 NLLGEIGLLNSLV---MWSSVSMM----MLMLLSFFSAVYTLF 397
Cdd:PRK08375 387 GFVSKWYLVVGAVeagQWLVLAVLlassLLALLYFLRIWYRAF 429
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
22-390 |
1.00e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 81.89 E-value: 1.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 22 WVVQSLMFLMSFSFLFVCILFLGVGNLSYIFGCDILSFGLIL---LSFWVC--SLMIMASELVFRYKNYQGFFLFMVIFL 96
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIfdsLSFYLIllVLFLGLYSQVMFYNLLSGVSRFFLFLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 97 MLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLDGK 176
Cdd:MTH00062 81 LIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 177 SVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSglkYNFIWVGISLVG 256
Cdd:MTH00062 161 DSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG---SFLGYLFLCCLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 257 GVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGL 336
Cdd:MTH00062 238 SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSG 317
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 938339286 337 MNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLnslvmWSSVSMMMLMLLSFF 390
Cdd:MTH00062 318 INGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV-----SSSFGVLVYLLFWCF 366
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
4-391 |
9.91e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 76.31 E-value: 9.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 4 FMFMLLFLIPLCFMKNFWWVVQSLMFLMSFSFL--FVCILFLGVGN------------LSYIFGCDILS-FGLILLSFWV 68
Cdd:PRK08667 11 LLLLAAAVIPLVFRHKRKRVWQSVLWLVIAIALllFAGSLQLFTGNpldiplwgiapgLDITFHIDRLAaFFIILIGLVS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 69 CSLMIMASELVFRYKNYQGFFL---FMVIFLMLMLYCTFSSmSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLF 145
Cdd:PRK08667 91 LCVAIYSLGYNEHMSSNERANLlsaLTALFILSMLGVVASA-NTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 146 YTLLASLPLLIGLFDVYELVDTLYIPLLDGKSVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLK 225
Cdd:PRK08667 170 MTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLK 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 226 LGGYGLLRVYKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLM- 304
Cdd:PRK08667 250 VAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAl 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 305 ----------IAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSL- 373
Cdd:PRK08667 330 lalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFf 409
|
410 420
....*....|....*....|..
gi 938339286 374 ----VMWSSVSMMMLMLLSFFS 391
Cdd:PRK08667 410 qsfsVADPLIKILLFSVLAIFA 431
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-357 |
3.04e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 74.36 E-value: 3.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 48 LSYIFGCDILSFGLILLSFWVCSLMIMAS-ELVFRYKNYQGfflfMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFL 126
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIgENTERPRLYYS----LILLINGGIAGALLAQNLLLFFLFYELELIPFYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 127 ILGWGYQpERLQAGIYLLFYTLLASLPLLIGLfdvyelvdtLYIPLLDGKSVIGF--------------IVYLSLIGAFL 192
Cdd:PRK07363 147 IAIWGGE-KRGYASIKFLIYTAVSGLLVLAAF---------LGIVWLSGSTSFDYdaistqnlslntqlILLTGLLLGFG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 193 VKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYkvLILSGLKYNFIWVGISLVGGVLV---SLVCLRQTD 269
Cdd:PRK07363 217 IKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGTISViygALSAIAQKD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 270 LKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFL 349
Cdd:PRK07363 295 IKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSAL 374
|
....*...
gi 938339286 350 LSSSNMAA 357
Cdd:PRK07363 375 LVLAGMAS 382
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-103 |
7.04e-13 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 64.85 E-value: 7.04e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 1 MLKFMFMLLFLIPLCFMKNFWW------VVQSLMFLMSFSFLFvCILFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIM 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwttstLYSLLLALLSLLLLN-NPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMIL 79
|
90 100 110
....*....|....*....|....*....|.
gi 938339286 75 ASELVFRY--KNYQGFFLFMVIFLMLMLYCT 103
Cdd:pfam01059 80 ASQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-400 |
9.28e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 70.00 E-value: 9.28e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 55 DILSFGLILLSFWVCSLMIMASELVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQP 134
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 135 ERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLDGKS-----------------VIGFIVYLSLIgAFLVKMPM 197
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIrglsfpltgglagnpplALGVALALALW-AFTIKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 198 FLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVL--ILSGLKYNFIWVGISL-----VGGVLVSLVCLRQTDL 270
Cdd:PRK12667 240 FPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIfgISPSLIDFRAALSPILiilgaVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 271 KALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLL 350
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIG 399
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 938339286 351 SSSNMAAPPSLNLLGEIGLLNSLVMwssVSMMMLMLLSFFSAVYTLFLYA 400
Cdd:PRK12667 400 ALSLVGIPPLNGFFSKLLLFNALLE---SGFYLPALVLLIASAISLVGYF 446
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
57-362 |
3.55e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 65.55 E-value: 3.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 57 LSFGLILLSFWVCSLMIMASELVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFsFYLFFEGSLIPTLFLILGWGYQPER 136
Cdd:PRK12646 81 LMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTIL-MYVFWELTSVSSFLLISYWYNNGDS 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 137 LQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLDGKS-------VIGFIVYLSLIGAFlVKMPMFLVHLWLPSAhV 209
Cdd:PRK12646 160 QFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQAdhiknhgLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-M 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 210 EAPVSGSMIL-AGVLLKLGGYGLLRVYKVLILSGLkYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIV--- 285
Cdd:PRK12646 238 AAPTPVSAYLhSATMVKAGIFLLFRFTPLLGLSNM-YIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImam 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 286 --LGGMMTLTFWGLSSSFTLMIA---------HGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALwWFLLSSSN 354
Cdd:PRK12646 317 vgIGGGYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALS 395
|
....*...
gi 938339286 355 MAAPPSLN 362
Cdd:PRK12646 396 MAGVPFLN 403
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-324 |
3.13e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 61.89 E-value: 3.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 70 SLMIMASELVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTlFLILGWGYQPERLQAGIYLLFYTLL 149
Cdd:PRK07234 77 ALVTLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNV 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 150 ASLPLLIGLFDVYELVDTLYIPLLDGKSVIGFIVylsLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGY 229
Cdd:PRK07234 156 AMLFYLIGAVLVYQANGTFAFSGLATADPEAFAL---IALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 230 GLLRVykVLILSGlkynfIWVGISLVGG---VLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLsssftlmiA 306
Cdd:PRK07234 233 PLVRC--ALDVPG-----LDLIVRIFGVgtaLLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLYAL--------A 297
|
250
....*....|....*...
gi 938339286 307 HGLCSSGLFCLANISYER 324
Cdd:PRK07234 298 HGLVKSTLFLCAGALPSR 315
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-362 |
7.40e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.88 E-value: 7.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 109 LFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLDGK-----SVIGFIV 183
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKmsenpTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 184 YLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILaGVLLKLGGYGLLRVykVLILSGLKYNFIWVG--------ISLV 255
Cdd:PRK08376 223 LALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML-LVIKQAGLYALARV--LFSIYGPAINLATVGwviiilgcLTMF 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 256 GGVLVSLVclrQTDLKALIAYSSVAHMG-IVLG---GMMTLTFWGLSS-SFTLM-------IAHGLCSSGLFCLANISYE 323
Cdd:PRK08376 300 VGVAMAVV---QKDVKRLLAYHSVSQIGyMLLGlgvGLAALGDPAMASyGEIALaggiyhiVNHALYKALLFLTAGAVIY 376
|
250 260 270
....*....|....*....|....*....|....*....
gi 938339286 324 RLGSRSLLINKGLMNYMPtMALWWFLLSSSNMAAPPSLN 362
Cdd:PRK08376 377 ETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
185-398 |
9.94e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 60.33 E-value: 9.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 185 LSLIGaFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRvYKVLILSGLKYNF---IWVGISLVGGVLVS 261
Cdd:PRK06458 219 FLLIG-FGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLR-YYILIDAAIGSDFpgrLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 262 LVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMP 341
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 938339286 342 TMAlWWFLLSSSNMA-APPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSAVYTLFL 398
Cdd:PRK06458 377 LTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVR 433
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
41-315 |
1.11e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 60.40 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 41 LFLGVGNLSYIFGCDILSFGLILLSFWVCSLMIMASelVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSL 120
Cdd:PRK08668 54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFM--VSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 121 IPTLFLILgWGYQPERLQAGIYLLFyTLLASLPLLIGLFDVYELVDTLYIP------LLDGKSVIGFIVYLSLIGAFLVK 194
Cdd:PRK08668 132 FSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFAdisqglINDTSTGFALIVFLFLLAFGVAK 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 195 MPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIWV-GISLVGGVLV----------SLV 263
Cdd:PRK08668 210 AGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYrGVPLFNYILAwlgnisiivgTLM 289
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 938339286 264 CLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLF 315
Cdd:PRK08668 290 AILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-402 |
2.96e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 55.92 E-value: 2.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 181 FIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNF--IWVGISLVGGV 258
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFsnVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 259 LVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMN 338
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFR 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339286 339 YMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSS--VSMMMLMLLSFFSAVYTLFLYAFS 402
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVwlVLAVLLLLLLAASSFAIFLLKAFT 431
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-370 |
6.87e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 54.59 E-value: 6.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 91 FMVIFLMLM--LYCTFSSMSLFSFYLFFEGSLIPTlFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTL 168
Cdd:PRK12665 113 FLPTYLILVagVSNAFLAGDLFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 169 YIPLLDGK-----SVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGL 243
Cdd:PRK12665 192 NMADLAVRldelpSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 244 KYNFI-WVGI-SLVGGVLVSLVclrQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANIS 321
Cdd:PRK12665 272 LDTLLmVVALlTMVVGILGAIA---QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLI 348
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 938339286 322 YERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLL 370
Cdd:PRK12665 349 ERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-395 |
8.54e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 54.35 E-value: 8.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 193 VKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRV-YKV----LILSGLKYNFIWVGISLVGGVLVSLVCLRQ 267
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvYDVfkanFVFTTLPFNNVFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 268 TDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWW 347
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAF 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 938339286 348 FLLSSSNMAAPPSLNLLGEIGLLNSLVMWSS-VSMMMLMLLSFFSAVYT 395
Cdd:PRK12662 381 VLLSLSLIGMPPTSGFVAKWYILDAFIKSNAwIGLVVLLVGSGLSVIYV 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
147-374 |
6.81e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.97 E-value: 6.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 147 TLLASLPLLIGLFDVYELVDTLYIPLLDGKSVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEA-PVSGSMILAGVLLK 225
Cdd:PRK12650 174 TLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAItPVSAFLHAAAVVKA 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 226 LggygllrVYKVLILSGL-----KYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSS 300
Cdd:PRK12650 254 G-------IYLLLRFSPVfhdvaVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAA 326
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 938339286 301 FTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPtMALWWFLLSSSNMAA-PPSLNLLGEIGLLNSLV 374
Cdd:PRK12650 327 VVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFL 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
91-400 |
9.90e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 50.92 E-value: 9.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 91 FMVIFLMLMLYCT--FSSMSLFSFYLFFEGSLIpTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTL 168
Cdd:PRK08377 110 YAMLFLLLMLGATgmIATGDIFNLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 169 ---YIPLLDGK--SVIGFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGL 243
Cdd:PRK08377 189 nmaHIAQLAGTidPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANG 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 244 KYNFIW--VGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLFCLANIS 321
Cdd:PRK08377 269 WSSVLKlvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYV 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938339286 322 YERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPslnllgeigllnSLVMWSSVSMMMLMLLSFFSAVYTLFLYA 400
Cdd:PRK08377 349 GITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPL------------FNVFWSKFRIILAGLSAGYTWPVALVLGA 415
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-396 |
2.28e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.81 E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 61 LILLSF-WVCSLMIMASELVFRYKNYQGFFLFMVIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLIlGWGYQPERLQA 139
Cdd:PRK06589 89 LLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLSG 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 140 GIY----LLFYTLLASLPLLIGLFDVYELVDTLYIPLLD-GKSVIGFIVYLSLIGaflvKMPMFLVHLWLPSAHV-EAPV 213
Cdd:PRK06589 168 GYKylkiLMISALLLFLPAVILIYTKTGNLDFVSGGLFSkNQSIILLLMFIYGIA----KTAIFPVHSWLPAAMVaHYPV 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 214 SG---SMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIW-VGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLGGM 289
Cdd:PRK06589 244 SAllhAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWlIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSA 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 290 MTLTFWGLSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGL 369
Cdd:PRK06589 324 FILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLI 403
|
330 340 350
....*....|....*....|....*....|..
gi 938339286 370 L-----NSLVMWSSVSMMMLMLLSFFSAVYTL 396
Cdd:PRK06589 404 LlaaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
88-365 |
9.35e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 47.99 E-value: 9.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 88 FFLFMVIFLMLMLYCTFSSmSLFSFYLFFEGSLIPTLFLIlgwGYQPER-------LQAgiylLFYT------LLASLPL 154
Cdd:PRK12647 97 FYSYILLFMASMLGLVLSD-NLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTgggglaLLAGLIL 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 155 LI---GLFDVYELVDT--------LYIPlldgksvigfIVYLSLIGAFlVKMPMFLVHLWLPSAhVEAPV-------SGS 216
Cdd:PRK12647 169 LGnvtGTYSLSELLASgdvirehpLYLA----------ILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTpvsaylhSAT 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 217 MILAGvllklggygllrVYKVLILS-GLKYNFIWVGI-SLVGG---VLVSLVCLRQTDLKALIAYSSVAhmgiVLGGMMT 291
Cdd:PRK12647 237 MVKAG------------IYLLARLNpVLGGTPLWQTIlPLFGGltmLTGALLAVRQTDLKLILAYSTVS----ALGTLVM 300
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339286 292 LTFWG----LSSSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLG 365
Cdd:PRK12647 301 LLGLGselaIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLA 378
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
83-399 |
1.03e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 47.84 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 83 KNYQGFFLFMVIFL--MLMLYCtfsSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFD 160
Cdd:COG1009 108 PGLARFFAYLLLFMaaMLGLVL---SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 161 VYELVDTL-------YIPLLDGKSVIGFIVYLSLIGAFlVKMPMFLVHLWLPSAhVEAP--VS-----------GSMILA 220
Cdd:COG1009 185 LGAIAGTLnfsellaAAPTILSSPLLTLILLLLLLGAF-GKSAQFPLHFWLPDA-MEGPtpVSallhaatmvkaGVYLLA 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 221 gvllklggygllRVYKVLILSGLKYNFI-WVG-ISLVGGVLVSLVclrQTDLKALIAYSSVAHMGIVlggMMTLTFWGLS 298
Cdd:COG1009 263 ------------RLSPLFALSPVWLTVVaIIGaITALFAALIALA---QTDIKRVLAYSTVSQLGYM---FLALGVGAYV 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 299 SSFTLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMAlWWFLLSSSNMAA-PPSLNLLGEIGLLNSLVMWS 377
Cdd:COG1009 325 AALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITA-ITFLIGALSLAGiPPFAGFFSKEAILEAALEAG 403
|
330 340
....*....|....*....|....*
gi 938339286 378 SVSMMMLMLL---SFFSAVYTLFLY 399
Cdd:COG1009 404 GLGPLLLAVAllgAFLTAFYSFRLF 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
60-345 |
1.30e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 47.42 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 60 GLILLSFWVCslMIMASELVFRYKNYQG----FFLFMVIFLMLMLyctfSSMSLFSFYLFFEGSLIPTLFLILGWGYQPE 135
Cdd:COG1007 77 LLILLAALLV--LLLSRDYLERRGLLRGefyaLLLFATLGMMLMA----SANDLLTLFLGLELLSLSLYVLVAFRRDDRR 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 136 RLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIP----LLDGKSVIGFIVYLSL---IGAFLVKMPMFLVHLWLPSAH 208
Cdd:COG1007 151 SSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAgiaaALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 209 VEAPVSGSMILAGVLLKLGGYGLLRV-YKVLILSGLKYNFIWVGISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLG 287
Cdd:COG1007 231 EGAPTPVTAFLATAPKIAAFAALLRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLL 310
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 938339286 288 GMMTLTFWGLSSSFTLMIAHGLCSSGLF-CLANISYERLGSRSLLINKGLMNYMPTMAL 345
Cdd:COG1007 311 GLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLAL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
95-374 |
8.24e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 44.64 E-value: 8.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 95 FLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTLYIPLLD 174
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 175 -----GKSVIGFIV---YLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLggygllrVYKVLILSGLKYN 246
Cdd:MTH00196 81 lvlnsGQSFSSVSVpigYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 247 FIWVG--ISLVGGVLVSLvclRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSsglFCLANISYER 324
Cdd:MTH00196 154 ILLIGglFSLFVGAIGAL---NQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILAL 227
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 938339286 325 LGSRSLLIN-KGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLV 374
Cdd:MTH00196 228 NVYKNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGV 278
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
187-315 |
8.98e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 8.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 187 LIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLI--LSGLKYNFIWVgISLVGGVLVSLVC 264
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFggLSEDWQQVLAI-IAIASMLVGNLAA 288
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 938339286 265 LRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLF 315
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
185-362 |
1.03e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 44.49 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 185 LSLIGaFLVKMPMFLVHLWLPSAHVEAP------VSGSMIlagvllklggygllrvyKVLIlsglkYNFIWVGISLVG-- 256
Cdd:PRK06521 215 LALFG-FGAKAGLVPLHVWLPRAHPAAPshvsalMSGVML-----------------KVAI-----YGILRVVFDLLGap 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 257 ------------------GVLVSLVclrQTDLKALIAYSSVAHMGIVL-----------GGMMTLTFWGLSSSFTLMIAH 307
Cdd:PRK06521 272 gwwwgvlvlalgaisavlGVLYALA---EHDLKRLLAYSTIENIGIIFvglglamvfiaYGMPLLAALALTAALYHLLNH 348
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 938339286 308 GLCSSGLFCLANISYERLGSRSLLINKGLMNYMPTMAlWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 349 ALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-212 |
3.13e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.92 E-value: 3.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 90 LFMviFLMLMLYCTFSSMSLFSFYLFFEGSLIPTLFLILGwGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDTL- 168
Cdd:PRK12666 114 LFQ--FQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLn 190
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 938339286 169 ------YIPLLDGKSVIGFIVYLSLIG-AFLVKMPMFLVHLWLPSAHVEAP 212
Cdd:PRK12666 191 madlaqRIAQLPAADRALLEAGAALLLvVFLIKAAMWPLNFWLPPAYAAAS 241
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
88-402 |
6.44e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.12 E-value: 6.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 88 FFLFMVIFLMLMLYCTFSSMSLfSFYLFFEGSLIPTLFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVDT 167
Cdd:PRK12649 113 YYQYLLLFMGSMIGMVFSGNTI-QLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 168 LYIP-LLDGKSVIGFI---------VYLSLIGAfLVKMPMFLVHLWLPSAhVEAPVSGSMIL-AGVLLKLGGYGLLRVYK 236
Cdd:PRK12649 192 YDIAtILQDSELIENIkghplflitLILIFIGA-AAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 237 vlILSGLKYNFIWV-GISLVGGVLVSLVCLRQTDLKALIAYSSVAHmgivLGGMMTLTFW--------GLSSSFTLMIAH 307
Cdd:PRK12649 270 --IFSGTEAWFILVsGTGMITMVLAGFLAFRQTDIKAILAYSTISQ----LAYLMTMYGYttyhepglGVAAATFHLLNH 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 308 GLCSSGLFCLANISYERLGSRSLLINKGLMNYMPtMALWWFLLSSSNMAAPPSLN--LLGEIGLLNSLVMWSSVSMMMLM 385
Cdd:PRK12649 344 ATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLNgfLSKEMFYETSVEMGALIGGPFTI 422
|
330
....*....|....*..
gi 938339286 386 LLSFFSAVYTLFLYAFS 402
Cdd:PRK12649 423 IIPAVAVLGGVFTFAYS 439
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
180-315 |
9.21e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 41.77 E-value: 9.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 180 GFIVYLSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKlggygllrVYKVLILSGLKYNFIWVGISLVGGVL 259
Cdd:MTH00198 298 GSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--------TVYILLTSLVITSKLLLSVAIISLVV 369
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 938339286 260 VSLVCLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLF 315
Cdd:MTH00198 370 GAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
87-401 |
1.10e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 41.09 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 87 GFFLFMvIFLMLMLYCTFSSMSLFSFYLFFEGSLIPTlFLILGWGYQPERLQAGIYLLFYTLLASLPLLIGLFDVYELVD 166
Cdd:PRK12663 109 GFPPFI-LLLMAGVIGSFLTGDLFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 167 TLYIPLL--------DGKSVIgfIVYLSLIGAFLVKMPMFLVHlWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVL 238
Cdd:PRK12663 187 TLNMAHIamrlndmgDTATLT--TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 239 ------ILSGLKYnfIWVGISLVGGVLVSLVclrQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSS 312
Cdd:PRK12663 264 fpqereLLHPLLA--TMAAITMVIGALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKT 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 313 GLFCLANISYERLGSRSLLINKGLMNYMPTMALWWFLLSSSNMAAPPSLNLLGEIGLLNSLVMWSSVSMMMLMLLSFFSA 392
Cdd:PRK12663 339 ALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLIT 418
|
330
....*....|..
gi 938339286 393 VYTL---FLYAF 401
Cdd:PRK12663 419 MYSLfriFFLAY 430
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
185-315 |
3.31e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 39.55 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339286 185 LSLIGAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGVLLKLGGYGLLRVYKVLILSGLKYNFIWVGISLVGGVLV-SLV 263
Cdd:TIGR01770 207 VLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIgNFG 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 938339286 264 CLRQTDLKALIAYSSVAHMGIVLGGMMTLTFWGLSSSFTLMIAHGLCSSGLF 315
Cdd:TIGR01770 287 ALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| |
