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Conserved domains on  [gi|937516454|gb|ALI36941|]
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Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) [Candidatus Nitrosocosmicus oleophilus]

Protein Classification

mannosyl-3-phosphoglycerate synthase( domain architecture ID 10559966)

mannosyl-3-phosphoglycerate synthase transfers a mannosyl group from GDP-mannose to phosphoglycerate to form mannosyl-3-phosphoglycerate with retention of configuration

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Osmo_MPGsynth pfam09488
Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); This family consists of examples of ...
7-390 0e+00

Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP) EC:2.4.1.217, comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.


:

Pssm-ID: 401440  Cd Length: 380  Bit Score: 553.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454    7 PRFSERIGAISLHAVQKIYELDSGKSPeFHGGHRTIRAFDHDELSSIFRDLAIVIPIKNERLRLIEGVLSGIPNECMVVI 86
Cdd:pfam09488   2 PRHTERFGNVRIHDVQRVLELDSGRVD-NGSENPLLVTFSRDALEDIESQMAIVVPCKNEDLKLLEGVLSGIPHDCLVIV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   87 VSNSQISPVNRFSMEVEMIKQYSQFADKKIIIIHQGDPDLAKIFEEVKYTSILDSK-KQIRDGKAEGMIIGILMAKMHNK 165
Cdd:pfam09488  81 VSNSSRGPVDRFKMEVDLLKQFCRLTGRPAIIIHQKDPALAEAFKAAGYPEILDEDgGLIRSGKGEGMILGILLAKLLGR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  166 KYIGFIDSDNYFPGAVNEYCKIYAVGFGMASTPYSNIRISWLYKPKIRNNILKFPKWGRTSEVTNKYLNALLSYITGFET 245
Cdd:pfam09488 161 RYVGFIDADNYVPGAVNEYCKAFAAGFAMAKSPYAMVRIKWRSKPKVRNDELYFRKWGRVSEVTNRWLNKLLSAITGFET 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  246 DIIKTGNSGEHALSMSLAENLNYSSGYSIEPYEFINILEKFGGLLPTDSPDIVEKGVEIFQIETRNPHFHEEKGKDHLTE 325
Cdd:pfam09488 241 DIIKTGNAGEHAMTMELALKLRFASGYAIEPFQLIDILERFGGLLPTEDPEAADKGVEILQIETRNPHFHEEKGEEHIRD 320
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 937516454  326 MLQASLLAISNSKVCNMELAKEIKEHLLRLETLykkdKSGkIESKKYFIMDPIKTIPIDKFGELV 390
Cdd:pfam09488 321 MLAAGLGTIYHSKLAPEELKDDILEELKENGAL----EEG-EEPPKPRVYPPISDLDLKKFREVL 380
 
Name Accession Description Interval E-value
Osmo_MPGsynth pfam09488
Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); This family consists of examples of ...
7-390 0e+00

Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP) EC:2.4.1.217, comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.


Pssm-ID: 401440  Cd Length: 380  Bit Score: 553.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454    7 PRFSERIGAISLHAVQKIYELDSGKSPeFHGGHRTIRAFDHDELSSIFRDLAIVIPIKNERLRLIEGVLSGIPNECMVVI 86
Cdd:pfam09488   2 PRHTERFGNVRIHDVQRVLELDSGRVD-NGSENPLLVTFSRDALEDIESQMAIVVPCKNEDLKLLEGVLSGIPHDCLVIV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   87 VSNSQISPVNRFSMEVEMIKQYSQFADKKIIIIHQGDPDLAKIFEEVKYTSILDSK-KQIRDGKAEGMIIGILMAKMHNK 165
Cdd:pfam09488  81 VSNSSRGPVDRFKMEVDLLKQFCRLTGRPAIIIHQKDPALAEAFKAAGYPEILDEDgGLIRSGKGEGMILGILLAKLLGR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  166 KYIGFIDSDNYFPGAVNEYCKIYAVGFGMASTPYSNIRISWLYKPKIRNNILKFPKWGRTSEVTNKYLNALLSYITGFET 245
Cdd:pfam09488 161 RYVGFIDADNYVPGAVNEYCKAFAAGFAMAKSPYAMVRIKWRSKPKVRNDELYFRKWGRVSEVTNRWLNKLLSAITGFET 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  246 DIIKTGNSGEHALSMSLAENLNYSSGYSIEPYEFINILEKFGGLLPTDSPDIVEKGVEIFQIETRNPHFHEEKGKDHLTE 325
Cdd:pfam09488 241 DIIKTGNAGEHAMTMELALKLRFASGYAIEPFQLIDILERFGGLLPTEDPEAADKGVEILQIETRNPHFHEEKGEEHIRD 320
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 937516454  326 MLQASLLAISNSKVCNMELAKEIKEHLLRLETLykkdKSGkIESKKYFIMDPIKTIPIDKFGELV 390
Cdd:pfam09488 321 MLAAGLGTIYHSKLAPEELKDDILEELKENGAL----EEG-EEPPKPRVYPPISDLDLKKFREVL 380
osmo_MPGsynth TIGR02460
mannosyl-3-phosphoglycerate synthase; This family consists of examples of ...
3-390 0e+00

mannosyl-3-phosphoglycerate synthase; This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.


Pssm-ID: 162866  Cd Length: 381  Bit Score: 552.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454    3 LDFPPRFSERIGAISLHAVQKIYELDSGkSPEFHggHRTIRAFDHDELSSIFRDLAIVIPIKNERLRLIEGVLSGIPNEC 82
Cdd:TIGR02460   1 LLEAPNYTERFGAVRIHEVQRVLELDSG-TPKSP--IYTLSNIDREELYDLLGKTAIVVPVKNEKLHLLEGVLSGIPHEC 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   83 MVVIVSNSQISPVNRFSMEVEMIKQYSQFADKKIIIIHQGDPDLAKIFEEVKYTSILDSKKQIRDGKAEGMIIGILMAKM 162
Cdd:TIGR02460  78 PIIVVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALAEALKEVGYTSILGENGLVRSGKGEGMLLGLLLAAA 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  163 HNKKYIGFIDSDNYFPGAVNEYCKIYAVGFGMASTPYSNIRISWLYKPKIRNNILKFPKWGRTSEVTNKYLNALLSYITG 242
Cdd:TIGR02460 158 IGAEYVGFVDADNYFPGAVNEYVKIYAAGFLMATSPYSMVRIHWRYKPKLTKGTLYFRKWGRVSEITNHYLNLLISEHTG 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  243 FETDIIKTGNSGEHALSMSLAENLNYSSGYSIEPYEFINILEKFGGLLPTDSPDIVEKGVEIFQIETRNPHFHEEKGKDH 322
Cdd:TIGR02460 238 FETDIIKTGNAGEHALTMKLAEILPFSSGYAVEPYELVYILERFGGWLPVEEKDVFDQGIEIFQIETLNPHFHEEKGDEH 317
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 937516454  323 LTEMLQASLLAISNSKVCNMELAKEIKEHLLRLETLYKKDksgkiESKKYFIMDPIKTIPIDKFGELV 390
Cdd:TIGR02460 318 IAEMLLLSLATIYHSKLATEEVRKRILDDLRDLGILGENE-----EPPKPLVYRPIKEIPIKEFADFV 380
PRK14502 PRK14502
bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; ...
8-392 1.02e-122

bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional


Pssm-ID: 184713 [Multi-domain]  Cd Length: 694  Bit Score: 370.80  E-value: 1.02e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   8 RFSERIGAISLHAVQKIYELDSGKSPEFH-GGHRTIRAFDHDELSSIFRDLAIVIPIKNERLRLIEGVLSGIPNECMVVI 86
Cdd:PRK14502   7 RPAEHLGNVTIHGVRRFLELDSGAPNLPHlQESREVEMVDQQAISDVEKKMAIVLPIKDEDLKVFEGVLSGIPHDCLMIV 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  87 VSNSQISPVNRFSMEVEMIKQYSQFADKKIIIIHQGDPDLAKIFEEVKYTSILDSKKQIRDGKAEGMIIGILMAKMHNKK 166
Cdd:PRK14502  87 ISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRD 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454 167 YIGFIDSDNYFPGAVNEYCKIYAVGFGMASTPYSNIRISWLYKPKIRNNiLKFPKWGRTSEVTNKYLNALLSYITGFETD 246
Cdd:PRK14502 167 YVGFIDTDNYIPGAVWEYAKHFATGFNLAQSPYSMVRILWKYKPKLVGD-LYFKRWGRVSEVTNKHLNHLISSKGKFETE 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454 247 IIKTGNSGEHALSMSLAENLNYSSGYSIEPYEFINILEKFGGLLPTDSPDIVEKGVEIFQIETRNPHFHEEKGKDH-LTE 325
Cdd:PRK14502 246 IIKTGNAGEHAMSIELAKRLTYGTGYAVETKEIMSILEQFSGILPIEDREVAEEGVEILQTETINPHLHEDKGGDHlLQD 325
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 937516454 326 MLQASLLAISNSKVCNMELAKEIKEHLLRLETLykkdKSGkIESKKYFIMDPIKTIPIDKFGELVKK 392
Cdd:PRK14502 326 MLLPSLAVIYHSPLADEAGRKMIETQLAGIEGL----ESG-PEIPQIKLIPPPQKMDLPKFSAIIEK 387
 
Name Accession Description Interval E-value
Osmo_MPGsynth pfam09488
Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); This family consists of examples of ...
7-390 0e+00

Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP) EC:2.4.1.217, comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.


Pssm-ID: 401440  Cd Length: 380  Bit Score: 553.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454    7 PRFSERIGAISLHAVQKIYELDSGKSPeFHGGHRTIRAFDHDELSSIFRDLAIVIPIKNERLRLIEGVLSGIPNECMVVI 86
Cdd:pfam09488   2 PRHTERFGNVRIHDVQRVLELDSGRVD-NGSENPLLVTFSRDALEDIESQMAIVVPCKNEDLKLLEGVLSGIPHDCLVIV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   87 VSNSQISPVNRFSMEVEMIKQYSQFADKKIIIIHQGDPDLAKIFEEVKYTSILDSK-KQIRDGKAEGMIIGILMAKMHNK 165
Cdd:pfam09488  81 VSNSSRGPVDRFKMEVDLLKQFCRLTGRPAIIIHQKDPALAEAFKAAGYPEILDEDgGLIRSGKGEGMILGILLAKLLGR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  166 KYIGFIDSDNYFPGAVNEYCKIYAVGFGMASTPYSNIRISWLYKPKIRNNILKFPKWGRTSEVTNKYLNALLSYITGFET 245
Cdd:pfam09488 161 RYVGFIDADNYVPGAVNEYCKAFAAGFAMAKSPYAMVRIKWRSKPKVRNDELYFRKWGRVSEVTNRWLNKLLSAITGFET 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  246 DIIKTGNSGEHALSMSLAENLNYSSGYSIEPYEFINILEKFGGLLPTDSPDIVEKGVEIFQIETRNPHFHEEKGKDHLTE 325
Cdd:pfam09488 241 DIIKTGNAGEHAMTMELALKLRFASGYAIEPFQLIDILERFGGLLPTEDPEAADKGVEILQIETRNPHFHEEKGEEHIRD 320
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 937516454  326 MLQASLLAISNSKVCNMELAKEIKEHLLRLETLykkdKSGkIESKKYFIMDPIKTIPIDKFGELV 390
Cdd:pfam09488 321 MLAAGLGTIYHSKLAPEELKDDILEELKENGAL----EEG-EEPPKPRVYPPISDLDLKKFREVL 380
osmo_MPGsynth TIGR02460
mannosyl-3-phosphoglycerate synthase; This family consists of examples of ...
3-390 0e+00

mannosyl-3-phosphoglycerate synthase; This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.


Pssm-ID: 162866  Cd Length: 381  Bit Score: 552.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454    3 LDFPPRFSERIGAISLHAVQKIYELDSGkSPEFHggHRTIRAFDHDELSSIFRDLAIVIPIKNERLRLIEGVLSGIPNEC 82
Cdd:TIGR02460   1 LLEAPNYTERFGAVRIHEVQRVLELDSG-TPKSP--IYTLSNIDREELYDLLGKTAIVVPVKNEKLHLLEGVLSGIPHEC 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   83 MVVIVSNSQISPVNRFSMEVEMIKQYSQFADKKIIIIHQGDPDLAKIFEEVKYTSILDSKKQIRDGKAEGMIIGILMAKM 162
Cdd:TIGR02460  78 PIIVVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALAEALKEVGYTSILGENGLVRSGKGEGMLLGLLLAAA 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  163 HNKKYIGFIDSDNYFPGAVNEYCKIYAVGFGMASTPYSNIRISWLYKPKIRNNILKFPKWGRTSEVTNKYLNALLSYITG 242
Cdd:TIGR02460 158 IGAEYVGFVDADNYFPGAVNEYVKIYAAGFLMATSPYSMVRIHWRYKPKLTKGTLYFRKWGRVSEITNHYLNLLISEHTG 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  243 FETDIIKTGNSGEHALSMSLAENLNYSSGYSIEPYEFINILEKFGGLLPTDSPDIVEKGVEIFQIETRNPHFHEEKGKDH 322
Cdd:TIGR02460 238 FETDIIKTGNAGEHALTMKLAEILPFSSGYAVEPYELVYILERFGGWLPVEEKDVFDQGIEIFQIETLNPHFHEEKGDEH 317
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 937516454  323 LTEMLQASLLAISNSKVCNMELAKEIKEHLLRLETLYKKDksgkiESKKYFIMDPIKTIPIDKFGELV 390
Cdd:TIGR02460 318 IAEMLLLSLATIYHSKLATEEVRKRILDDLRDLGILGENE-----EPPKPLVYRPIKEIPIKEFADFV 380
PRK14502 PRK14502
bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; ...
8-392 1.02e-122

bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional


Pssm-ID: 184713 [Multi-domain]  Cd Length: 694  Bit Score: 370.80  E-value: 1.02e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   8 RFSERIGAISLHAVQKIYELDSGKSPEFH-GGHRTIRAFDHDELSSIFRDLAIVIPIKNERLRLIEGVLSGIPNECMVVI 86
Cdd:PRK14502   7 RPAEHLGNVTIHGVRRFLELDSGAPNLPHlQESREVEMVDQQAISDVEKKMAIVLPIKDEDLKVFEGVLSGIPHDCLMIV 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454  87 VSNSQISPVNRFSMEVEMIKQYSQFADKKIIIIHQGDPDLAKIFEEVKYTSILDSKKQIRDGKAEGMIIGILMAKMHNKK 166
Cdd:PRK14502  87 ISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRD 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454 167 YIGFIDSDNYFPGAVNEYCKIYAVGFGMASTPYSNIRISWLYKPKIRNNiLKFPKWGRTSEVTNKYLNALLSYITGFETD 246
Cdd:PRK14502 167 YVGFIDTDNYIPGAVWEYAKHFATGFNLAQSPYSMVRILWKYKPKLVGD-LYFKRWGRVSEVTNKHLNHLISSKGKFETE 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454 247 IIKTGNSGEHALSMSLAENLNYSSGYSIEPYEFINILEKFGGLLPTDSPDIVEKGVEIFQIETRNPHFHEEKGKDH-LTE 325
Cdd:PRK14502 246 IIKTGNAGEHAMSIELAKRLTYGTGYAVETKEIMSILEQFSGILPIEDREVAEEGVEILQTETINPHLHEDKGGDHlLQD 325
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 937516454 326 MLQASLLAISNSKVCNMELAKEIKEHLLRLETLykkdKSGkIESKKYFIMDPIKTIPIDKFGELVKK 392
Cdd:PRK14502 326 MLLPSLAVIYHSPLADEAGRKMIETQLAGIEGL----ESG-PEIPQIKLIPPPQKMDLPKFSAIIEK 387
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
59-178 5.79e-04

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 40.46  E-value: 5.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937516454   59 IVIPIKNER---LRLIEGVLSGIPNECMVVIVSNSqiSPVNrfsmEVEMIKQYSQfADKKIIIIHQGdpdlakifeevky 135
Cdd:pfam00535   2 VIIPTYNEEkylLETLESLLNQTYPNFEIIVVDDG--STDG----TVEIAEEYAK-KDPRVRVIRLP------------- 61
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 937516454  136 tsildskkqIRDGKAEGMIIGILMAKmhnKKYIGFIDSDNYFP 178
Cdd:pfam00535  62 ---------ENRGKAGARNAGLRAAT---GDYIAFLDADDEVP 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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