|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
3.20e-131 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 368.51 E-value: 3.20e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLIVMFPTLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFIG 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 81 STNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRL 160
Cdd:MTH00101 81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 937408794 161 TANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDNT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-225 |
1.07e-49 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 161.61 E-value: 1.07e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 6 FASFMIPTMMGLPIVTLIVMFptLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFIGSTNLL 85
Cdd:TIGR01131 10 ITLFSLTLLSLILLLSLLIFL--ISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 86 GLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRLTANIT 165
Cdd:TIGR01131 88 GLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANIS 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 166 AGHLIMHLTGSATLALMSISPTTafITFIILISLTALEFAVALIQAYVFTLLISLYLHDN 225
Cdd:TIGR01131 168 AGHLLLTLLSGLLFSLMSSAIFA--LLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
65-222 |
6.90e-41 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 136.76 E-value: 6.90e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 65 GQTWSLMLISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVII 144
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 937408794 145 ETISLFIQPTALAVRLTANITAGHLIMHLTGSATLALMSISpttAFITFIILISLTALEFAVALIQAYVFTLLISLYL 222
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSV---GLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
59-223 |
5.04e-36 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 126.07 E-value: 5.04e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 59 IIHSPKGQTWSLMLISLITFIGSTNLLGLL---PYSFTPTTQLSMNLGMAVPLWAGTVIMGLR-HKTKTSLAHFLPQGTP 134
Cdd:pfam00119 48 NIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKkHGLGGYFKKLFVPPVP 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 135 TPLIPMLVIIETISLFIQPTALAVRLTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVF 214
Cdd:pfam00119 128 LPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVF 207
|
....*....
gi 937408794 215 TLLISLYLH 223
Cdd:pfam00119 208 TMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
63-224 |
7.27e-25 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 97.07 E-value: 7.27e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 63 PKGQTWSLMLISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHK-TKTSLAHFLPQGTPtPLIPML 141
Cdd:COG0356 52 KKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLM 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 142 VIIETISLFIQPTALAVRLTANITAGHLIMHLtgsatLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLY 221
Cdd:COG0356 131 LPIEIISELARPLSLSLRLFGNMFAGHIILLL-----LAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
|
...
gi 937408794 222 LHD 224
Cdd:COG0356 206 ISL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
3.20e-131 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 368.51 E-value: 3.20e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLIVMFPTLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFIG 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 81 STNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRL 160
Cdd:MTH00101 81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 937408794 161 TANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDNT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
2.98e-87 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 257.45 E-value: 2.98e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLIVMFPTLLFPSPS-RLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFI 79
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKnRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 80 GSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVR 159
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 937408794 160 LTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDNT 226
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
4.24e-82 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 244.11 E-value: 4.24e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLIVMFPTLLFPSPS-RLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFI 79
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTnKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 80 GSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVR 159
Cdd:MTH00073 81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 937408794 160 LTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDNT 226
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
2.60e-81 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 242.09 E-value: 2.60e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLIVMFPTLLFPSPS-RLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFI 79
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTsRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 80 GSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVR 159
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 937408794 160 LTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDN 225
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
4.84e-71 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 216.35 E-value: 4.84e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLIVMFPTLLFPSP-SRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFI 79
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLtNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 80 GSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVR 159
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 937408794 160 LTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDNT 226
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-221 |
2.81e-50 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 163.03 E-value: 2.81e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLIVMFPTLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFIG 80
Cdd:MTH00157 1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 81 STNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRL 160
Cdd:MTH00157 81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 937408794 161 TANITAGHLIMHLTGSatlALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLY 221
Cdd:MTH00157 161 AANMIAGHLLLTLLGN---TGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLY 218
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
6-225 |
1.07e-49 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 161.61 E-value: 1.07e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 6 FASFMIPTMMGLPIVTLIVMFptLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFIGSTNLL 85
Cdd:TIGR01131 10 ITLFSLTLLSLILLLSLLIFL--ISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 86 GLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRLTANIT 165
Cdd:TIGR01131 88 GLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANIS 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 166 AGHLIMHLTGSATLALMSISPTTafITFIILISLTALEFAVALIQAYVFTLLISLYLHDN 225
Cdd:TIGR01131 168 AGHLLLTLLSGLLFSLMSSAIFA--LLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
1-225 |
7.27e-47 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 154.75 E-value: 7.27e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLP--IVTLIVMFPTLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITF 78
Cdd:MTH00035 3 INNSIFGQFSPDTILFIPltLLSSVIALSWLFFINPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFIL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 79 IGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAV 158
Cdd:MTH00035 83 ILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGL 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 937408794 159 RLTANITAGHLIMHLTGSATLALMSiSPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDN 225
Cdd:MTH00035 163 RLAANLTAGHLLIFLLSTAIWELSN-SPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQN 228
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
65-222 |
6.90e-41 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 136.76 E-value: 6.90e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 65 GQTWSLMLISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVII 144
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 937408794 145 ETISLFIQPTALAVRLTANITAGHLIMHLTGSATLALMSISpttAFITFIILISLTALEFAVALIQAYVFTLLISLYL 222
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSV---GLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
7.99e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 134.00 E-value: 7.99e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGLPIVTLI---VMFPTLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLIT 77
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIFSMISLSwitLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 78 FIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALA 157
Cdd:MTH00176 81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 937408794 158 VRLTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDNT 226
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
5-224 |
3.12e-38 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 132.30 E-value: 3.12e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 5 LFASFMIPTMMGLPIVTLIVMFPTL---LFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFIGS 81
Cdd:MTH00173 5 LFSSFDDHNSSFSSLSFLMWLLSLMslfFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLIS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 82 TNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRLT 161
Cdd:MTH00173 85 LNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLL 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 937408794 162 ANITAGHLIMHLTGSATLA-LMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHD 224
Cdd:MTH00173 165 ANISAGHIVLTLIGNYLSSsLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
59-223 |
5.04e-36 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 126.07 E-value: 5.04e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 59 IIHSPKGQTWSLMLISLITFIGSTNLLGLL---PYSFTPTTQLSMNLGMAVPLWAGTVIMGLR-HKTKTSLAHFLPQGTP 134
Cdd:pfam00119 48 NIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKkHGLGGYFKKLFVPPVP 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 135 TPLIPMLVIIETISLFIQPTALAVRLTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVF 214
Cdd:pfam00119 128 LPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVF 207
|
....*....
gi 937408794 215 TLLISLYLH 223
Cdd:pfam00119 208 TMLTAVYIS 216
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
1-224 |
8.54e-33 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 118.22 E-value: 8.54e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 1 MNENLFASFMIPTMMGL---PIVTLIVMFPTLLFPSPSRLITNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLIT 77
Cdd:MTH00172 1 MSSSYFDQFNIVWLIGLtnsSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 78 FIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALA 157
Cdd:MTH00172 81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 937408794 158 VRLTANITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHD 224
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLAD 227
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
4-226 |
9.33e-30 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 110.59 E-value: 9.33e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 4 NLFASFMIPTMMGLPIVTLIVMFPTLLFPSPsrlitNRLISIQQQMTNLILKRMMIIHSPKGQTWSLMLISLITFIGSTN 83
Cdd:MTH00005 14 NSLFNNLSSTAFWAFNFSIILLLSSSFWITP-----NRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 84 LLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRLTAN 163
Cdd:MTH00005 89 LSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAAN 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 937408794 164 ITAGHLIMHLTGSATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHDNT 226
Cdd:MTH00005 169 MSAGHIVLSLIGIYAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDDHP 231
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
19-224 |
4.68e-28 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 106.24 E-value: 4.68e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 19 IVTLIVMFPTLLFPSpSRLITNRLISIQQQMTNLIlkRMMIIHS--PKGQTWSLMLISLITFIGSTNLLGLLPYSFTPTT 96
Cdd:MTH00175 34 MMVLAVIIFWLLLKG-DKLIPNRWQSIMELIYLNI--RSVVHDNlgKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 97 QLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPTALAVRLTANITAGHLIMH-LTG 175
Cdd:MTH00175 111 HIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAiLSG 190
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 937408794 176 SATLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYLHD 224
Cdd:MTH00175 191 FAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGD 239
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
63-224 |
7.27e-25 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 97.07 E-value: 7.27e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 63 PKGQTWSLMLISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHK-TKTSLAHFLPQGTPtPLIPML 141
Cdd:COG0356 52 KKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLM 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 142 VIIETISLFIQPTALAVRLTANITAGHLIMHLtgsatLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLY 221
Cdd:COG0356 131 LPIEIISELARPLSLSLRLFGNMFAGHIILLL-----LAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
|
...
gi 937408794 222 LHD 224
Cdd:COG0356 206 ISL 208
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
64-224 |
5.91e-21 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 87.69 E-value: 5.91e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 64 KGQTWSLMLISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVI 143
Cdd:MTH00174 86 KGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTI 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 144 IETISLFIQPTALAVRLTANITAGHLIMHLTGSATLALMSISPTT-AFITFIILISLTALEFAVALIQAYVFTLLISLYL 222
Cdd:MTH00174 166 IETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYL 245
|
..
gi 937408794 223 HD 224
Cdd:MTH00174 246 RD 247
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
64-224 |
6.21e-21 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 87.16 E-value: 6.21e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 64 KGQTWSLMLISLITFIGSTNLLGLLP-YSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKtktSLAHFLPQGTPTPlIPMLV 142
Cdd:PRK05815 68 KGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 143 IIETISLFIQPTALAVRLTANITAGHLIMHLTGSatlaLMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYL 222
Cdd:PRK05815 144 PIEIISEFSRPISLSLRLFGNMLAGELILALIAL----LGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYI 219
|
..
gi 937408794 223 HD 224
Cdd:PRK05815 220 SM 221
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
72-222 |
5.28e-19 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 84.02 E-value: 5.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 72 LISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLR-HKTKTSLAHfLPQGTPTPLIPMLVIIETISLF 150
Cdd:PRK13419 174 LLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKaHGIKGYLAH-LTGGTHWSLWIIMIPIEFIGLF 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 151 IQPTALAVRLTANITAGHLIMhltgsatLALMSI-----SPTTAF---ITFIILISLtaLEFAVALIQAYVFTLLISLYL 222
Cdd:PRK13419 253 TKPFALTVRLFANMTAGHIVI-------LSLIFIsfilkSYIVAVavsVPFAIFIYL--LELFVAFLQAYIFTMLSALFI 323
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
71-222 |
4.64e-11 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 59.61 E-value: 4.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 71 MLISLITFigstNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSlaHFLPQGTPTPLIPM-LVIIETISL 149
Cdd:MTH00087 58 TFIVLLLF----CFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEKFS--VYLSKGSDSFLKTFsMLFVEIVSE 131
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 937408794 150 FIQPTALAVRLTANITAGHLIMHLTGSATlalmsispttaFITFIILISLTALEFAVALIQAYVFTLLISLYL 222
Cdd:MTH00087 132 LSRPLALTLRLTVNLMVGHLISSLLNFLG-----------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYL 193
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
93-222 |
1.43e-07 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 51.04 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 93 TPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPT-ALAVRLTANITAGH-LI 170
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIVSPMAKTfALTVRLLANMTAGHvII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 937408794 171 MHLTGsatLALMSISPTTAFITFIILISLTALEFAVALIQAYVFTLLISLYL 222
Cdd:PRK13417 297 LALMG---FIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFV 345
|
|
| PRK13420 |
PRK13420 |
F0F1 ATP synthase subunit A; Provisional |
74-222 |
4.81e-03 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237382 [Multi-domain] Cd Length: 226 Bit Score: 37.03 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408794 74 SLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTS-LAHFLpqgTPTP-LIPMLVIIEtislFI 151
Cdd:PRK13420 80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLREyLKHYL---SPSPfLLPFHLISE----IT 152
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 937408794 152 QPTALAVRLTANItaghliMHLTGSATLALMsispttaFITFIILISLTALEFAVALIQAYVFTLLISLYL 222
Cdd:PRK13420 153 RTLALAVRLFGNI------MSLELAALLVLL-------VAGFLVPVPILMLHIIEALVQAYIFGMLALIYI 210
|
|
|