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Conserved domains on  [gi|930171749|ref|WP_054174926|]
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Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [Mycoplasmoides pneumoniae]

Protein Classification

Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA( domain architecture ID 10015499)

Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase

CATH:  3.90.1300.10
EC:  6.3.5.7
Gene Ontology:  GO:0006424|GO:0030956|GO:0050567
PubMed:  19520089|9342321
SCOP:  4002446

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
gatA TIGR00132
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ...
 8-471 0e+00

aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]


:

Pssm-ID: 272925 [Multi-domain]  Cd Length: 460  Bit Score: 692.93  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749    8 LQQTLTKKPASINPLLQQIDGAINEHWS-SNFLLKNTVEWAQAQAPKNRSK--SPLNNIPFVLKDNIATKGIVTTGGSRF 84
Cdd:TIGR00132   1 LRQLLKKKEISIKEVLEASLDRIEANKDkINAFLEVTVEKALKQAKKLDKAilTPLAGIPIAVKDNISTKGIVTTCASKI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   85 LEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDT 164
Cdd:TIGR00132  81 LENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  165 GDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPDAgKFTRSLKE 244
Cdd:TIGR00132 161 GGSIRQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVPDP-EFFEELKK 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  245 sFNKQIKIGYLKPLEEWFDIELSKKWNSLKERITLEGCELIPFHFPleLLEVIDPVYKLISYSEAVSCYSNLTGIVFGQK 324
Cdd:TIGR00132 240 -DLKGLKVGVVKEFSEEMDKEVQEKFENALEVLEELGAEIVEVSFP--HVKYALPIYYIISPSEASSNLARYDGIRYGYR 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  325 LFEPNqasDFSKTITANRDRFFGEQLKRRFIIGAFGTDKNNFTKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTK 404
Cdd:TIGR00132 317 IEEPN---SLKELYAKTRAEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVDVIVSPTAPTLPF 393

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 930171749  405 TIAAVQKgESFTNLVDDFLQL-ANFAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEEL 471
Cdd:TIGR00132 394 KIGEKLD-DPLEMYLSDILTVpANLAGLPAISVPCGVKEKGLPIGLQIIGKCFDDKTLLQVSYAFEQA 460
 
Name Accession Description Interval E-value
gatA TIGR00132
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ...
 8-471 0e+00

aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]


Pssm-ID: 272925 [Multi-domain]  Cd Length: 460  Bit Score: 692.93  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749    8 LQQTLTKKPASINPLLQQIDGAINEHWS-SNFLLKNTVEWAQAQAPKNRSK--SPLNNIPFVLKDNIATKGIVTTGGSRF 84
Cdd:TIGR00132   1 LRQLLKKKEISIKEVLEASLDRIEANKDkINAFLEVTVEKALKQAKKLDKAilTPLAGIPIAVKDNISTKGIVTTCASKI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   85 LEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDT 164
Cdd:TIGR00132  81 LENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  165 GDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPDAgKFTRSLKE 244
Cdd:TIGR00132 161 GGSIRQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVPDP-EFFEELKK 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  245 sFNKQIKIGYLKPLEEWFDIELSKKWNSLKERITLEGCELIPFHFPleLLEVIDPVYKLISYSEAVSCYSNLTGIVFGQK 324
Cdd:TIGR00132 240 -DLKGLKVGVVKEFSEEMDKEVQEKFENALEVLEELGAEIVEVSFP--HVKYALPIYYIISPSEASSNLARYDGIRYGYR 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  325 LFEPNqasDFSKTITANRDRFFGEQLKRRFIIGAFGTDKNNFTKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTK 404
Cdd:TIGR00132 317 IEEPN---SLKELYAKTRAEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVDVIVSPTAPTLPF 393

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 930171749  405 TIAAVQKgESFTNLVDDFLQL-ANFAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEEL 471
Cdd:TIGR00132 394 KIGEKLD-DPLEMYLSDILTVpANLAGLPAISVPCGVKEKGLPIGLQIIGKCFDDKTLLQVSYAFEQA 460
Amidase pfam01425
Amidase;
17-462 4.67e-161

Amidase;


Pssm-ID: 396144 [Multi-domain]  Cd Length: 442  Bit Score: 462.92  E-value: 4.67e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   17 ASINPLLQQIDGAINEHWSSNFLLKNTVEWAQAQAPKNRSK----SPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPF 92
Cdd:pfam01425   1 ELVEAFLDRIEAANPKLNAFVTVFFDEALAQAAAADKQRAAgdpkGPLHGVPIAVKDNIDVKGVPTTAGSKALENYPAPY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   93 SATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPA 172
Cdd:pfam01425  81 DATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  173 RICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPDagKFTRSLKESFNKQIKI 252
Cdd:pfam01425 161 SFCGLVGLKPTYGRVSRYGVVGYASSLDQVGPLARSVEDAALLLRVISGYDPKDSTSLPPPV--PDYAEPVKKSLKGLRI 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  253 GYLKPLeEWFDIELSKKWNSLKERITLEGCELIPFHFPLELLEVIDPVYKLISYSEAVSCYSNLTGIvfgqklfePNQAS 332
Cdd:pfam01425 239 GVYRED-GYFDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDYALPLYYLIAPAEASSNLARYDGV--------PSGPD 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  333 DFSKTITANRDRFFGEQLKRRFIIGAFGTDKNNFTKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTKTIAAVQKG 412
Cdd:pfam01425 310 DLSELYPRTRAEGLGDEVKRRIILGNYALSAGYYDKYYLKAQKVRRLIRREFAGLFEELDVLLSPTAPTPAPRLGEPDDS 389

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 930171749  413 ESFTNLVDDFL---QLANFAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLL 462
Cdd:pfam01425 390 PLVMYNLDDFTagvVPVNLAGLPAISLPAGFTADGLPVGVQIIGKPGDEETLL 442
PRK07139 PRK07139
amidase; Provisional
 53-478 1.02e-114

amidase; Provisional


Pssm-ID: 235945 [Multi-domain]  Cd Length: 439  Bit Score: 344.72  E-value: 1.02e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  53 KNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHH 132
Cdd:PRK07139  30 KNNKDGPLANCVFTIKDNFATSEGPTHASSKSLENFKPSYNATVVQKLINAGAKPVAKVHCDELGLGGTGLFSAFGLIKN 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 133 PWNETLIPGGSSSGSAyAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDV 212
Cdd:PRK07139 110 PLDSSKLVGGSSSGSA-ATFNKNISFAIGSDTGDSVRLPASFIGKVGFKPSYGAISRYGLFAYASSLDTVAYFTHNVNDA 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 213 ALVSDEIIKHDKADFSaqkspdagkftrSLKESFN-----KQIKIGYLKpLEEWFDIELSKKWNSLKERITLEGCELIPF 287
Cdd:PRK07139 189 IILSKVLFGKDENDLT------------SVDVKINnvkktKPKKVAYLD-CFKELEEYVAKKYKKLINILKSENIEVEKI 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 288 HFPLELLEVIDPVYKLISYSEAVSCYSNLTGIVFGQKlfEPNQasDFSKTITANRDRFFGEQLKRRFIIGAFGTDKNNFT 367
Cdd:PRK07139 256 KIDEKLLKAIKPVYKIISYSEASSNLANLNGIAFGNR--EKGS--SWEEIMINTRSEGFGKMVQKRLILGSYFLEEENQE 331

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 368 KYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTKTIAAVQKGESftNLVDDFLQLANFAGNPSITIPWlVKQKDQTI 447
Cdd:PRK07139 332 KYFLKAKKVRRVIKNYYESIHNKFDIVIYPAYADIAPDIDENENKSD--NYMDYILTISNLVGNPSLSIPL-GKYNNLPF 408

                        410       420       430
                 ....*....|....*....|....*....|.
gi 930171749 448 GLSVNANCFHDKQLLQVAAWLEELFQIEHDD 478
Cdd:PRK07139 409 NLAIDSKIYDDEKLLSYSLYIEELIKGINEE 439
GatA COG0154
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ...
 45-472 7.05e-111

Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases


Pssm-ID: 439924 [Multi-domain]  Cd Length: 468  Bit Score: 335.97  E-value: 7.05e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  45 EWAQAQA-------PKNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFG 117
Cdd:COG0154   50 ERALAEAraadarrAAGEALGPLAGVPVAVKDLIDVAGLPTTAGSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFA 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 118 LGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAP 197
Cdd:COG0154  130 MGGSTENSAYGPTRNPWDPDRTPGGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLAS 209

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 198 SLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPdAGKFTRSLKESFnKQIKIGYLK--PLEEWFDIELSKKWNSLKE 275
Cdd:COG0154  210 SLDQVGPLARTVADAALLLDVLAGPDPRDPTSAPAP-VPDYLAALDRDL-KGLRIGVPReyFGGDGVDPEVAAAVEAAAA 287

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 276 RITLEGCELIPFHFPleLLEVIDPVYKLISYSEAvscysnltgivfgqklfepnqASDFSKTITANRDRfFGEQLKRRFI 355
Cdd:COG0154  288 ALEALGAEVVEVDLP--DLDEALAAYYTIAAAEA---------------------AANLADLLRTRPEG-FGPEVRRRIL 343

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 356 IGAFGTDknnftKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTKTIAAVQKGESFTN----LVDDFLQLANFAGN 431
Cdd:COG0154  344 LGAYYSA-----ADYLKAQRVRALLRRDFAAAFEDYDVLLTPTTPTPAPPIGELDADIDPALamnyLLDRFTAPANLAGL 418

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|.
gi 930171749 432 PSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEELF 472
Cdd:COG0154  419 PALSVPAGFTADGLPVGLQLIGPPGDEATLLRLAAALEQAL 459
 
Name Accession Description Interval E-value
gatA TIGR00132
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ...
 8-471 0e+00

aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]


Pssm-ID: 272925 [Multi-domain]  Cd Length: 460  Bit Score: 692.93  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749    8 LQQTLTKKPASINPLLQQIDGAINEHWS-SNFLLKNTVEWAQAQAPKNRSK--SPLNNIPFVLKDNIATKGIVTTGGSRF 84
Cdd:TIGR00132   1 LRQLLKKKEISIKEVLEASLDRIEANKDkINAFLEVTVEKALKQAKKLDKAilTPLAGIPIAVKDNISTKGIVTTCASKI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   85 LEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDT 164
Cdd:TIGR00132  81 LENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  165 GDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPDAgKFTRSLKE 244
Cdd:TIGR00132 161 GGSIRQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVPDP-EFFEELKK 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  245 sFNKQIKIGYLKPLEEWFDIELSKKWNSLKERITLEGCELIPFHFPleLLEVIDPVYKLISYSEAVSCYSNLTGIVFGQK 324
Cdd:TIGR00132 240 -DLKGLKVGVVKEFSEEMDKEVQEKFENALEVLEELGAEIVEVSFP--HVKYALPIYYIISPSEASSNLARYDGIRYGYR 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  325 LFEPNqasDFSKTITANRDRFFGEQLKRRFIIGAFGTDKNNFTKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTK 404
Cdd:TIGR00132 317 IEEPN---SLKELYAKTRAEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVDVIVSPTAPTLPF 393

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 930171749  405 TIAAVQKgESFTNLVDDFLQL-ANFAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEEL 471
Cdd:TIGR00132 394 KIGEKLD-DPLEMYLSDILTVpANLAGLPAISVPCGVKEKGLPIGLQIIGKCFDDKTLLQVSYAFEQA 460
Amidase pfam01425
Amidase;
17-462 4.67e-161

Amidase;


Pssm-ID: 396144 [Multi-domain]  Cd Length: 442  Bit Score: 462.92  E-value: 4.67e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   17 ASINPLLQQIDGAINEHWSSNFLLKNTVEWAQAQAPKNRSK----SPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPF 92
Cdd:pfam01425   1 ELVEAFLDRIEAANPKLNAFVTVFFDEALAQAAAADKQRAAgdpkGPLHGVPIAVKDNIDVKGVPTTAGSKALENYPAPY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   93 SATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPA 172
Cdd:pfam01425  81 DATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  173 RICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPDagKFTRSLKESFNKQIKI 252
Cdd:pfam01425 161 SFCGLVGLKPTYGRVSRYGVVGYASSLDQVGPLARSVEDAALLLRVISGYDPKDSTSLPPPV--PDYAEPVKKSLKGLRI 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  253 GYLKPLeEWFDIELSKKWNSLKERITLEGCELIPFHFPLELLEVIDPVYKLISYSEAVSCYSNLTGIvfgqklfePNQAS 332
Cdd:pfam01425 239 GVYRED-GYFDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDYALPLYYLIAPAEASSNLARYDGV--------PSGPD 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  333 DFSKTITANRDRFFGEQLKRRFIIGAFGTDKNNFTKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTKTIAAVQKG 412
Cdd:pfam01425 310 DLSELYPRTRAEGLGDEVKRRIILGNYALSAGYYDKYYLKAQKVRRLIRREFAGLFEELDVLLSPTAPTPAPRLGEPDDS 389

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 930171749  413 ESFTNLVDDFL---QLANFAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLL 462
Cdd:pfam01425 390 PLVMYNLDDFTagvVPVNLAGLPAISLPAGFTADGLPVGVQIIGKPGDEETLL 442
PRK07139 PRK07139
amidase; Provisional
 53-478 1.02e-114

amidase; Provisional


Pssm-ID: 235945 [Multi-domain]  Cd Length: 439  Bit Score: 344.72  E-value: 1.02e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  53 KNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHH 132
Cdd:PRK07139  30 KNNKDGPLANCVFTIKDNFATSEGPTHASSKSLENFKPSYNATVVQKLINAGAKPVAKVHCDELGLGGTGLFSAFGLIKN 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 133 PWNETLIPGGSSSGSAyAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDV 212
Cdd:PRK07139 110 PLDSSKLVGGSSSGSA-ATFNKNISFAIGSDTGDSVRLPASFIGKVGFKPSYGAISRYGLFAYASSLDTVAYFTHNVNDA 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 213 ALVSDEIIKHDKADFSaqkspdagkftrSLKESFN-----KQIKIGYLKpLEEWFDIELSKKWNSLKERITLEGCELIPF 287
Cdd:PRK07139 189 IILSKVLFGKDENDLT------------SVDVKINnvkktKPKKVAYLD-CFKELEEYVAKKYKKLINILKSENIEVEKI 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 288 HFPLELLEVIDPVYKLISYSEAVSCYSNLTGIVFGQKlfEPNQasDFSKTITANRDRFFGEQLKRRFIIGAFGTDKNNFT 367
Cdd:PRK07139 256 KIDEKLLKAIKPVYKIISYSEASSNLANLNGIAFGNR--EKGS--SWEEIMINTRSEGFGKMVQKRLILGSYFLEEENQE 331

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 368 KYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTKTIAAVQKGESftNLVDDFLQLANFAGNPSITIPWlVKQKDQTI 447
Cdd:PRK07139 332 KYFLKAKKVRRVIKNYYESIHNKFDIVIYPAYADIAPDIDENENKSD--NYMDYILTISNLVGNPSLSIPL-GKYNNLPF 408

                        410       420       430
                 ....*....|....*....|....*....|.
gi 930171749 448 GLSVNANCFHDKQLLQVAAWLEELFQIEHDD 478
Cdd:PRK07139 409 NLAIDSKIYDDEKLLSYSLYIEELIKGINEE 439
GatA COG0154
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ...
 45-472 7.05e-111

Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases


Pssm-ID: 439924 [Multi-domain]  Cd Length: 468  Bit Score: 335.97  E-value: 7.05e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  45 EWAQAQA-------PKNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFG 117
Cdd:COG0154   50 ERALAEAraadarrAAGEALGPLAGVPVAVKDLIDVAGLPTTAGSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFA 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 118 LGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAP 197
Cdd:COG0154  130 MGGSTENSAYGPTRNPWDPDRTPGGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLAS 209

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 198 SLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPdAGKFTRSLKESFnKQIKIGYLK--PLEEWFDIELSKKWNSLKE 275
Cdd:COG0154  210 SLDQVGPLARTVADAALLLDVLAGPDPRDPTSAPAP-VPDYLAALDRDL-KGLRIGVPReyFGGDGVDPEVAAAVEAAAA 287

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 276 RITLEGCELIPFHFPleLLEVIDPVYKLISYSEAvscysnltgivfgqklfepnqASDFSKTITANRDRfFGEQLKRRFI 355
Cdd:COG0154  288 ALEALGAEVVEVDLP--DLDEALAAYYTIAAAEA---------------------AANLADLLRTRPEG-FGPEVRRRIL 343

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 356 IGAFGTDknnftKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSASGFTKTIAAVQKGESFTN----LVDDFLQLANFAGN 431
Cdd:COG0154  344 LGAYYSA-----ADYLKAQRVRALLRRDFAAAFEDYDVLLTPTTPTPAPPIGELDADIDPALamnyLLDRFTAPANLAGL 418

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|.
gi 930171749 432 PSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEELF 472
Cdd:COG0154  419 PALSVPAGFTADGLPVGLQLIGPPGDEATLLRLAAALEQAL 459
PRK07488 PRK07488
indoleacetamide hydrolase;
33-225 1.37e-52

indoleacetamide hydrolase;


Pssm-ID: 236030 [Multi-domain]  Cd Length: 472  Bit Score: 184.02  E-value: 1.37e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  33 HWSSNFLLknTVEWAQA-----QAPKNRSKS---PLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSG 104
Cdd:PRK07488  41 LAPLNAFT--TVDAEGAlaaarRIDAQRAAGaalLLAGVPIVIKDNINTAGMPTTAGTPALLGFVPATDAPVVQRLLDAG 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 105 ALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTY 184
Cdd:PRK07488 119 AVPLGKANMHELAFGITSNNGAFGAVRNPYDPARIAGGSSGGTAAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTV 198

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 930171749 185 GLISRNGVYPYAPSLDHVGIFARYVYDVALVsDEIIKHDKA 225
Cdd:PRK07488 199 GRYSGDGVVPISHTRDTVGPIARSVADLALL-DAVITGDAA 238
PRK08186 PRK08186
allophanate hydrolase; Provisional
 47-240 4.95e-48

allophanate hydrolase; Provisional


Pssm-ID: 236177 [Multi-domain]  Cd Length: 600  Bit Score: 174.26  E-value: 4.95e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  47 AQAQAPKNRSKSPLNNIPFVLKDNIATKGIVTTGG-SRFLedYIPPFSATVFELLNNSGALLVGKANLDEF--GLGGTgl 123
Cdd:PRK08186  56 AAALEARDPAALPLYGVPFAVKDNIDVAGLPTTAAcPAFA--YTPERDATVVARLRAAGAIVIGKTNLDQFatGLVGT-- 131

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 124 HSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVG 203
Cdd:PRK08186 132 RSPYGAVRNAFDPEYVSGGSSSGSAVAVALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPACRTLDCVS 211

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 930171749 204 IFARYVYDVALVSDEIIKHDKADFSAQKSPDAGKFTR 240
Cdd:PRK08186 212 VFALTVDDADAVLAVMAGFDPADPYSRANPADAPAAL 248
PRK09201 PRK09201
AtzE family amidohydrolase;
59-469 6.80e-48

AtzE family amidohydrolase;


Pssm-ID: 236409 [Multi-domain]  Cd Length: 465  Bit Score: 171.30  E-value: 6.80e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  59 PLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFS-ATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNET 137
Cdd:PRK09201  71 PLAGVPFAVKNLFDVAGLTTLAGSKINRDRPPATRdATAVRRLEAAGAVLVGALNMDEYAYGFTTENSHYGATRNPHDLT 150

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 138 LIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSD 217
Cdd:PRK09201 151 RIAGGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGPFARSVADLALVYD 230

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 218 EIIKHDKAD-FSAQKSPDAgkfTRSLKESFNKQIKIGYlkpLEEWFDielskkwnslkeritlEGCelipfhFPlELLEV 296
Cdd:PRK09201 231 VLQGPDPQDpFQADRPAEP---TAPLLDRGAEGLRIAV---LGGYFA----------------QWA------DP-EARAA 281

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 297 IDPVYK---------------------LISYSEAVSCY-SNLTgivfgqklfepNQASDFSKtitANRDRFF-GEQLKRR 353
Cdd:PRK09201 282 VDRVAKalgatrevelpeaararaaafIITASEGGNLHlPALR-----------TRPQDFDP---ASRDRLLaGAMLPAA 347

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 354 FIigafgtdknnftkyfEKAQKIRRVMVDAYLNLFKEADFIVSPSasgfTKTIAAVQKGESFTnlVDD-----------F 422
Cdd:PRK09201 348 WY---------------VQAQRFRRWFRQAVLELFEHVDVLIAPA----TPCSAPLIGQETMR--IDGvelpvranlgiL 406

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 930171749 423 LQLANFAGNPSITIPwLVKQKDQTIGLSVNANCFHDKQLLQVAAWLE 469
Cdd:PRK09201 407 TQPISFIGLPVVAVP-LRTPGGLPIGVQLIAAPWREDLALRAAAALE 452
PRK07235 PRK07235
amidase; Provisional
 46-470 1.43e-47

amidase; Provisional


Pssm-ID: 235979 [Multi-domain]  Cd Length: 502  Bit Score: 171.34  E-value: 1.43e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  46 WAQAQAPKNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHS 125
Cdd:PRK07235  74 WYVKTSIKGAAEGKLAGKTVALKDNVAVAGVPMMNGSSTLEGFVPSFDATVVTRLLDAGATIVGKATCEDLCFSGGSHTS 153

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 126 GFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIF 205
Cdd:PRK07235 154 DPGPVHNPRDPGYSAGGSSSGSAALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTGAFPIERTIDHLGPM 233

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 206 ARYVYDVALVSDEIIKHDKADFSAQKSPDAGKFTRSLKESFnKQIKIGYLKpleEWF-----DIELSKKWNSLKERITLE 280
Cdd:PRK07235 234 TATVRDNALLLEVIAGRDGLDPRQPAQPPVDDYTAALDRGV-KGLKIGILR---EGFglpnsEPEVDEAVRAAAKRLEDL 309

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 281 GCELIPFHFPLELLEVidPVYKLISYSEAVSCYSNLTGIVFGQK-LFEPNQASDFSKTITANRDRfFGEQLKRRFIIGAF 359
Cdd:PRK07235 310 GATVEEVSIPLHRLAL--AIWNPIATEGATAQMMLGNGYGFNWKgLYDTGLLDAFGAGWRERADD-LSETVKLVMLLGQY 386

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 360 GTDKNNfTKYFEKAQKIRRVMVDAYLNLFKEADFIVSPSasgfTKTIAAV--QKGESFTNLVDDFLQ-LANFA-----GN 431
Cdd:PRK07235 387 GLERYH-GRYYAKARNLARRLRAAYDEALRKYDLLVMPT----TPMVATPlpAPDASREEYVSRALEmIANTApfdvtGH 461

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 930171749 432 PSITIPW-LVkqKDQTIGLSVNANCFHDKQLLQVAAWLEE 470
Cdd:PRK07235 462 PAMSVPCgLV--DGLPVGLMLVGRHFDEATILRAAAAFEA 499
PRK06102 PRK06102
amidase;
55-225 1.38e-41

amidase;


Pssm-ID: 235698 [Multi-domain]  Cd Length: 452  Bit Score: 154.04  E-value: 1.38e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  55 RSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDyIPPFS--ATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHH 132
Cdd:PRK06102  65 RSLGLLDGIPIAWKDLFDVAGSVTTAGSVVLAN-AAPASrdAAVVALLARAGMVSIGRTNMSEFAFSGLGLNPHYGTPVN 143

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 133 PWNETL--IPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVY 210
Cdd:PRK06102 144 PRSTDVprIPGGSSSGSAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLAKSLDSLGPLCRSVR 223

                        170
                 ....*....|....*
gi 930171749 211 DvALVSDEIIKHDKA 225
Cdd:PRK06102 224 D-AVWIDAAMRGLTA 237
PRK06707 PRK06707
amidase; Provisional
 42-470 1.68e-41

amidase; Provisional


Pssm-ID: 235855 [Multi-domain]  Cd Length: 536  Bit Score: 155.45  E-value: 1.68e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  42 NTVEWAQA--QAPKNRSKSPLNNIPFVLKDNIAT-KGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFG- 117
Cdd:PRK06707 117 NAMEEARKldQERSRNKKSNLYGIPVVVKDNVQTaKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANMSEWAn 196

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 118 ----LGGTGLHSGFGFVHHPWNE-TLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGV 192
Cdd:PRK06707 197 ylsfTMPSGYSGKKGQNLNPYGPiKFDTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGI 276

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 193 YPYAPSLDHVGIFARYVYDVALVSDEIIKHDKADFSAQKSPD--AGKFTRSLKESFNKQIKIGYLKPLEEWfDIELSKKW 270
Cdd:PRK06707 277 IPLAETLDTAGPMARTVKDAATLFNAMIGYDEKDVMTEKVKDkeRIDYTKDLSIDGLKGKKIGLLFSVDQQ-DENRKAVA 355

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 271 NSLKERITLEGCELIPFHFPLEllEVIDPVyKLISYS--EAVSCYsnltgivFGQKLFEPNQAsdFSKTITANRdrffgE 348
Cdd:PRK06707 356 EKIRKDLQDAGAILTDYIQLNN--GGVDNL-QTLEYEfkHNVNDY-------FSQQKNVPVKS--LEEIIAFNK-----K 418

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 349 QLKRRFIIGAF--------GTDKNNFTKYFEKAQKIRRVMVDAYLnLFKEADFIVspsasgftktiaavqkgesFTNlvD 420
Cdd:PRK06707 419 DSKRRIKYGQTlieaseksAITKDEFEKVVQTSQENAKKELDRYL-VEKGLDALV-------------------MIN--N 476

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 930171749 421 DFLQLANFAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEE 470
Cdd:PRK06707 477 EEVLLSAVAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQ 526
PRK08137 PRK08137
amidase; Provisional
 55-256 1.11e-39

amidase; Provisional


Pssm-ID: 236161 [Multi-domain]  Cd Length: 497  Bit Score: 149.53  E-value: 1.11e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  55 RSKSPLNNIPFVLKDNI-ATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFG-LGGTGLHSGF----G 128
Cdd:PRK08137  68 KVRGPLHGIPVLLKDNIdAADPMPTTAGSLALAGNRPTRDAFLVARLRDAGAVILGKANLSEWAnFRSTRSSSGWsargG 147

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 129 FVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARY 208
Cdd:PRK08137 148 LTRNPYALDRSPCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQDTAGPMTRT 227

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 930171749 209 VYDVALVSDEIIKHDKADfSAQKSPDAGK--FTRSLKESFNKQIKIGYLK 256
Cdd:PRK08137 228 VADAAAVLTAIAGGDPAD-PATASAPAPAvdYVAALDADALRGARLGVAR 276
PRK07056 PRK07056
amidase; Provisional
 58-220 4.39e-36

amidase; Provisional


Pssm-ID: 235921 [Multi-domain]  Cd Length: 454  Bit Score: 138.92  E-value: 4.39e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  58 SPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIP-PFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNE 136
Cdd:PRK07056  70 SPLAGIPVSVKDLFDVAGQVTRAGSRVLADAPPaAADAPAVARLRRAGAVLIGRTNMTEFAFSGLGLNPHYGTPRNPWRR 149

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 137 TL----IPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDV 212
Cdd:PRK07056 150 DVgdgrIPGGSSSGAAVSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLSTTLDSIGPLARSVACC 229


                 ....*...
gi 930171749 213 ALVsDEII 220
Cdd:PRK07056 230 ALV-DAVL 236
PRK06828 PRK06828
amidase; Provisional
 54-470 3.88e-35

amidase; Provisional


Pssm-ID: 180715 [Multi-domain]  Cd Length: 491  Bit Score: 136.87  E-value: 3.88e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  54 NRSKSPLNNIPFVLKDNIATKG-IVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGT-----GLHSGF 127
Cdd:PRK06828  74 KGVRGPLHGIPVLLKDNIETNDsMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKANMTELANFMSfemwaGYSARG 153

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 128 GFVHHPWN---ETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGI 204
Cdd:PRK06828 154 GQTINPYGtgeDDMFVGGSSTGSAIAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGP 233

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 205 FARYVYDVALVSDEIIKHDKADFSAQKSPD--AGKFTRSLKESFNKQIKIG--------YLKpLEEWFDIELSKKWNSLK 274
Cdd:PRK06828 234 FARTVTDAAILLGSLTGVDEKDVVTHKSEGiaEHDYTKYLDANGLNGAKIGvynnapkeYYE-SGEYDEKLFKETIEVLR 312

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 275 ER--ITLEGCELIPFHFPLEL--------------LEVIDPVYKLISYSEAVSCYSNLT--GIVFGQKLFEpnQASDFSK 336
Cdd:PRK06828 313 SEgaTVVEDIDIPSFHREWSWgvllyelkhsldnyLSKLPSTIPVHSISELMEFNENIAerALKYGQTKLE--RRKDFPN 390

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 337 TITANrdrffgEQLKRRFiigafgtdknnFTKYFEKAQKIRRVMvdAYLNLfkeaDFIVSPSASGFtkTIAAVqkgesft 416
Cdd:PRK06828 391 TLRNP------EYLNARL-----------EDIYFSQEQGIDFAL--EKYNL----DAILFPSYIGS--TICAK------- 438

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 930171749 417 nlvddflqlanfAGNPSITIPWLVKQKDQTIGLSVNANCFHDKQLLQVAAWLEE 470
Cdd:PRK06828 439 ------------AGYPSIAIPAGYMEGGRPFGITLASTAFSEGTLIKLAYAFEQ 480
PRK07486 PRK07486
amidase; Provisional
 47-255 8.25e-34

amidase; Provisional


Pssm-ID: 236028 [Multi-domain]  Cd Length: 484  Bit Score: 132.83  E-value: 8.25e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  47 AQAQAPKNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSG 126
Cdd:PRK07486  65 KDAALARGEYRGWLHGMPQAPKDLAPTKGIRTTLGSPIFADQVPQEDAIVVERMRAAGAIFIGKTNTPEFGLGSHTYNPV 144

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 127 FGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLIsrngvyPYAPSLD------ 200
Cdd:PRK07486 145 YGATRNPYDPSRSAGGSSGGAAAALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRV------PHGPGGDvfvqql 218

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 930171749 201 -HVGIFARYVYDVALVSDEIIKHDKADFSAQKSPDAGkFTRSLKESFnKQIKIGYL 255
Cdd:PRK07486 219 gTEGPMGRTVEDVALLLAVQAGYDPRDPLSLAEDPAR-FAQPLEADL-RGKRIAWL 272
PRK08310 PRK08310
amidase; Provisional
 59-214 1.93e-33

amidase; Provisional


Pssm-ID: 181375 [Multi-domain]  Cd Length: 395  Bit Score: 130.49  E-value: 1.93e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  59 PLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSAT--VFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNE 136
Cdd:PRK08310  25 PLAGLRFAVKDVFDVAGYVTGCGNPDWLAESPVATRTapAVEKLLAAGARFVGKTQTDELAFSLNGQNAHYGTPVNPAAP 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 930171749 137 TLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARyvyDVAL 214
Cdd:PRK08310 105 DRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTHGRISLEGVMPLAPSFDTVGWFAR---DIAL 179
PRK06169 PRK06169
putative amidase; Provisional
 47-229 2.83e-32

putative amidase; Provisional


Pssm-ID: 180437 [Multi-domain]  Cd Length: 466  Bit Score: 128.22  E-value: 2.83e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  47 AQAQAPKNR-----SKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIP-----PFSATVFEllnnSGALLVGKANLDEF 116
Cdd:PRK06169  54 AAARASEERwrrgePCGLLDGVPVSIKDIFLTRGWPTLRGSRAIDADGPwdvdaPAVARLRE----AGAVLLGKTTTPEF 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 117 GLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISrngVYPYA 196
Cdd:PRK06169 130 GWKGVTDSPLYGITRNPWDTRLTAGGSSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVP---LYPAS 206

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 930171749 197 P--SLDHVGIFARYVYDVALVSDEIIKHDKADFSA 229
Cdd:PRK06169 207 PfgTLAHVGPMTRTVADAALLLDVIARPDARDWSA 241
PRK05962 PRK05962
amidase; Validated
 47-473 6.16e-31

amidase; Validated


Pssm-ID: 168315 [Multi-domain]  Cd Length: 424  Bit Score: 123.74  E-value: 6.16e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  47 AQAQAPKNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFS-ATVFELLNNSGALLVGKANLDEFGLGGTGLHS 125
Cdd:PRK05962  33 ADARRRAGRSLGPLDGRIVSIKDLFDVAGEPTLAGSVIRRDAPPAGAdALIVQRLRNAGAVIIGKTHMTEFAFTPVGLNP 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 126 GFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIF 205
Cdd:PRK05962 113 HYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGFKPTARRIPLEGAFPLSPSLDSIGPL 192

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 206 ARYVYDVALvSDEIIkhdkadfsaqkspdAGKFTRSLKESFNKQIKIGYLKP-LEEWFDIELSKKWNSLKERITLEGCEL 284
Cdd:PRK05962 193 ARTVADCAA-ADAVM--------------AGEKPIPLEVLPVAGLRIGLPKGyLLADMEPDVAAAFEASLAALEKAGARI 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 285 IPFhfplelleVIDPVykLISYSEAVSCYSnLTGIvfgqklfepnQAS----DFSKTITANRDRFFGEQLKRRFIIGAFG 360
Cdd:PRK05962 258 ADL--------AIDDL--IARLAEATRIGS-IAGI----------EAShihaDWLADLDANVDIRVKRPLSRRIKVPLEA 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 361 tdknnFTKYFEKAQKIRRVMvDAYLNLFkeaDFIVSPSASGFTKTIAAVQKGESFTNLVDDFL----QLANFAGNPSITI 436
Cdd:PRK05962 317 -----YHRLMRTRAALARAM-DERLAGF---DMFALPATPIVAPTIASVSEDEEEYDRVENLLlrntQVANQFDLCSITL 387

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 930171749 437 PwlvkQKDQTI--GLSVNANCFHDKQLLQVAAWLEELFQ 473
Cdd:PRK05962 388 P----MPGMALpaGLMLTARNGSDRRLLAAAASVEKLLE 422
PRK11910 PRK11910
amidase; Provisional
 3-220 4.61e-29

amidase; Provisional


Pssm-ID: 183377 [Multi-domain]  Cd Length: 615  Bit Score: 120.52  E-value: 4.61e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   3 SQILKLQQTLTKKPASINPLLQQIDGAINEHwSSNFLLKNTV---------EWAQAQAPKNRSKSPLNNIPFVLKDNIAT 73
Cdd:PRK11910 165 ADVTKLQQLIATKQLSYKELAGIYLNRIKKY-DQNGLNLNAIteinptiiaEAEQLDKENTTNKSALYGMPVLLKDNIGT 243

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  74 KGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLG-GTGLHSGF----GFVHHPWNETLIPGGSSSGSA 148
Cdd:PRK11910 244 KELPTSAGTVALKDWVIGKDATIVENLKANGALILGKTNMSEWAAGmDEDLPNGYsgkkGQSKNPYSSNLDPSGSSSGSA 323

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 930171749 149 YAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEII 220
Cdd:PRK11910 324 TAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSSRFDTPGPLTRTVNDAYLTTNALT 395
PRK07042 PRK07042
amidase; Provisional
 47-229 1.86e-27

amidase; Provisional


Pssm-ID: 235915 [Multi-domain]  Cd Length: 464  Bit Score: 114.30  E-value: 1.86e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  47 AQAQAP-----KNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGT 121
Cdd:PRK07042  54 AAARAStarwaKGEPLGPLDGVPVTIKENIATRGVPVPLGTAATDLPPAAADAPPAARLREAGAVILAKTTMPDYGMLSS 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 122 GLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISrngVYPYAPSlDH 201
Cdd:PRK07042 134 GLSSFHGLTRNPWDLDQNPGGSSAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIP---IDPPYTG-RC 209

                        170       180
                 ....*....|....*....|....*...
gi 930171749 202 VGIFARYVYDVALVSDEIIKHDKADFSA 229
Cdd:PRK07042 210 AGPMTRTVDDAALLMSVLSRPDARDGTS 237
PLN02722 PLN02722
indole-3-acetamide amidohydrolase
 56-207 7.15e-27

indole-3-acetamide amidohydrolase


Pssm-ID: 166363  Cd Length: 422  Bit Score: 112.29  E-value: 7.15e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  56 SKSPLNNIPFVLKDNIATKGIVTTGGSrflEDYIPPFSA------TVFELLNnSGALLVGKANLDEFGLGGTGLHSGFGF 129
Cdd:PLN02722  23 HDLPLHGLTFAVKDIFDVEGYVTGFGN---PDWARTHSAatstapAVLAVLR-GGATCVGKTIMDEMAYSINGENAHYGT 98

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 930171749 130 VHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFAR 207
Cdd:PLN02722  99 PTNPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVIPMAQSFDTVGWFAR 176
PRK12470 PRK12470
amidase; Provisional
 47-219 1.88e-26

amidase; Provisional


Pssm-ID: 171524 [Multi-domain]  Cd Length: 462  Bit Score: 111.51  E-value: 1.88e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  47 AQAQAPKNR----SKSPLNNIPFVLKDNIATKGIVTTGGSrflEDYIPPFS--ATVFELLNNSGALLVGKANLDEFGLGG 120
Cdd:PRK12470  56 AEAEAAQQRldagERLPLLGVPIAIKDDVDVAGEVTTYGS---AGHGPAATsdAEVVRRLRAAGAVIIGKTNVPELMIMP 132

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 121 TGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLIS----RNGVYpya 196
Cdd:PRK12470 133 FTESLAFGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSIRIPSTWCGLFGLKPQRDRISlephDGAWQ--- 209

                        170       180
                 ....*....|....*....|...
gi 930171749 197 pSLDHVGIFARYVYDVALVSDEI 219
Cdd:PRK12470 210 -GLSVNGPIARSVMDAALLLDAT 231
PRK06170 PRK06170
amidase; Provisional
 59-227 8.53e-26

amidase; Provisional


Pssm-ID: 235723 [Multi-domain]  Cd Length: 490  Bit Score: 109.74  E-value: 8.53e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  59 PLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEfGLGG-TGLHSGFGFVHHPWNET 137
Cdd:PRK06170  75 PLLGIPVTVKESFNVAGLPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPL-GLQDwQSYNEIYGTTNNPWDLA 153

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 138 LIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNG-VYPYAPSLDH------VGIFARYVY 210
Cdd:PRK06170 154 RTPGGSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGhIPPPAPALPGqadlavAGPMARSAR 233

                        170
                 ....*....|....*..
gi 930171749 211 DVALVSDEIIKHDKADF 227
Cdd:PRK06170 234 DLALLLDVMAGPDPLDG 250
PRK06061 PRK06061
amidase; Provisional
 59-217 3.35e-25

amidase; Provisional


Pssm-ID: 235686 [Multi-domain]  Cd Length: 483  Bit Score: 108.25  E-value: 3.35e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  59 PLNNIPFVLKDNIATKGIVTTGGSrflEDYIPPFS--ATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNE 136
Cdd:PRK06061  81 PLLGVPIAVKDDVDVAGVPTAFGT---AGEVPPATadSEVVRRLRAAGAVIVGKTNTCELGQWPFTSGPAFGHTRNPWSR 157

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 137 TLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISrngVYPYAPSLDHV---GIFARYVYDVA 213
Cdd:PRK06061 158 DHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRIS---TWPLPEAFNGLtvnGPLARTVADAA 234


                 ....
gi 930171749 214 LVSD 217
Cdd:PRK06061 235 LLLD 238
PRK07487 PRK07487
amidase; Provisional
 59-214 3.70e-25

amidase; Provisional


Pssm-ID: 236029 [Multi-domain]  Cd Length: 469  Bit Score: 107.75  E-value: 3.70e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  59 PLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGG---TGLHsgfGFVHHPWN 135
Cdd:PRK07487  72 PLAGVPVTVKVNVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKAGAVIIGRTNTPAFSYRWftdNPLH---GRTLNPWD 148

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 136 ETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLI-SRNGVYPYAPSLDHV----GIFARYVY 210
Cdd:PRK07487 149 PSLTPGGSSGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVpAYNASSPERPIGAQLmsvqGPLARTVA 228


                 ....
gi 930171749 211 DVAL 214
Cdd:PRK07487 229 DLRL 232
PRK07869 PRK07869
amidase; Provisional
 43-213 1.65e-23

amidase; Provisional


Pssm-ID: 181154 [Multi-domain]  Cd Length: 468  Bit Score: 102.75  E-value: 1.65e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  43 TVEWAQAQAPKNRSKS-PLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGT 121
Cdd:PRK07869  56 AFDRARDRAARPGSQGgFFSGVPTFIKDNVDVAGLPTMHGSDAWTPRPAKADSDFARQFLATGLISLGKTQLPEFGFSAS 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 122 GLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAP-SLD 200
Cdd:PRK07869 136 TEHPRLGPVRNPWNTDYSAGASSGGSAALVAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLPvNIV 215

                        170
                 ....*....|...
gi 930171749 201 HVGIFARYVYDVA 213
Cdd:PRK07869 216 ANGVLTRTVRDTA 228
PRK06529 PRK06529
amidase; Provisional
 6-187 7.90e-18

amidase; Provisional


Pssm-ID: 180608 [Multi-domain]  Cd Length: 482  Bit Score: 85.64  E-value: 7.90e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749   6 LKLQQTLTKKPASINPLLQQIdgaINEHWSsnfllkntvEWAQAQAPKNRSKSPLNNIPFVLKD-NIATKGIVTTGGSRF 84
Cdd:PRK06529  21 LELVTQAIYKAKKLNPTLNAI---VSERYE---------EALEEAKQRDFSGKPFAGVPIFLKDlGQELKGQLSTSGSRL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  85 LEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDT 164
Cdd:PRK06529  89 FKNYQATKTDLYVKRLEDLGFIILGRSNTPEFGFKNISDSSLHGPVNLPFDNSRNAGGSSGGAAALVSSGIVALAAASDG 168

                        170       180
                 ....*....|....*....|...
gi 930171749 165 GDSVRRPARICNIVGFKPTYGLI 187
Cdd:PRK06529 169 GGSIRIPASFNGLIGLKPSRGRI 191
PRK06565 PRK06565
amidase; Validated
 49-227 2.44e-16

amidase; Validated


Pssm-ID: 180626  Cd Length: 566  Bit Score: 81.35  E-value: 2.44e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749  49 AQAPKNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFGLGgtGLHSG-F 127
Cdd:PRK06565  65 ARRARGETLGPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLRAAGAICLGKTNMPPMANG--GMQRGvY 142

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930171749 128 GFVHHPWNETLIPG----GSSSGSAYAVARGIVPFSIGTDTGDSVRRPARICNIVGFKPTYGLISRNGVYPYAPSLDHVG 203
Cdd:PRK06565 143 GRAESPYNAAYLTApfasGSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVV 222

                        170       180
                 ....*....|....*....|....*..
gi 930171749 204 IFARYVYDVALVSDEIIKHD---KADF 227
Cdd:PRK06565 223 PYARTMADLLEVLDVIVADDpdtRGDL 249
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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