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Protein Classification
E3 ubiquitin-protein ligase TRIP12 family protein ( domain architecture ID 13359941 )
E3 ubiquitin-protein ligase TRIP12 (thyroid hormone receptor interactor 12) family protein is involved in a broad range of physiological processes such as mouse embryogenesis; TRIP12 displays a HECT domain, a WW (tryptophan-tryptophan) protein-protein interaction motif and an ARM domain (armadillo/beta-catenin-like repeats)
List of domain hits
Name
Accession
Description
Interval
E-value
HECTc
cd00078 HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It ...
1590-1990
1.76e-128
HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.
Pssm-ID: 238033 [Multi-domain]
Cd Length: 352
Bit Score: 407.34
E-value: 1.76e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1590 K R TV N R EEL L KQ A ESVMQDLG SS -- RAM LE IQYEN E V G TG - L G P T L EF YA LVS Q EL QRADL GL W R geevtlsnpkgsqeg 1666
Cdd:cd00078 2 K I TV R R DRI L ED A LRQLSKVS SS dl KKV LE VEFVG E E G ID a G G V T R EF FT LVS K EL FNPSY GL F R --------------- 66
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1667 tk Y IQNLQ GL FALP fgrt AKPAHIAKVKMK FRFLG K L MA KA IMDF RL V DLP LGLP FYK WM L RQ et S L TSH DL FDI DP VVA 1746
Cdd:cd00078 67 -- Y TPDDS GL LYPN ---- PSSFADEDHLKL FRFLG R L LG KA LYEG RL L DLP FSRA FYK KL L GK -- P L SLE DL EEL DP ELY 138
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1747 R S VYH L E D IVRQKKR LE Q dksqtkeslqyale T L T MN gcsvedlg LD FTLP G FPNI ELK K GG K DIPVT IH N L EEY LR L VI 1826
Cdd:cd00078 139 K S LKE L L D NDGDEDD LE L -------------- T F T IE -------- LD SSFG G AVTV ELK P GG R DIPVT NE N K EEY VD L YV 196
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1827 FWA LN E G VSR Q FDS FRDGF ES V F P LSH L QY F Y PEEL DQ L L CGS ka DTW D AKT L MECCRPDH GY TH DS RAVKFLF E I L S SF 1906
Cdd:cd00078 197 DYR LN K G IEE Q VEA FRDGF SE V I P EEL L SL F T PEEL EL L I CGS -- EDI D LED L KKNTEYKG GY SS DS PTIQWFW E V L E SF 274
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1907 D NE QQRL FLQFVTGS P RLPVGGF RS LNP PL TI V R K tfest EN PDD F LP SVM TC V N Y LKLP D YSS I EI M REKLL I A AR EG q 1986
Cdd:cd00078 275 T NE ERKK FLQFVTGS S RLPVGGF AD LNP KF TI R R V ----- GS PDD R LP TAH TC F N L LKLP P YSS K EI L REKLL Y A IN EG - 348
....
gi 929653749 1987 QS F H 1990
Cdd:cd00078 349 AG F G 352
WWE
pfam02825 WWE domain; The WWE domain is named after three of its conserved residues and is predicted to ...
762-798
9.51e-09
WWE domain; The WWE domain is named after three of its conserved residues and is predicted to mediate specific protein- protein interactions in ubiquitin and ADP ribose conjugation systems.
Pssm-ID: 460715 [Multi-domain]
Cd Length: 66
Bit Score: 53.45
E-value: 9.51e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 929653749 762 I W Q W R DD R G L WHPY NRID S RI IE ----------------------------- Q I N E DTGT A R AIQ R 798
Cdd:pfam02825 1 V W E W E DD N G G WHPY DPEV S SL IE eayqkgkpsvdlsittagfpytidfksmt Q T N K DTGT T R PVR R 66
SRP1 super family
cl34886 Karyopherin (importin) alpha [Intracellular trafficking and secretion];
441-666
2.41e-05
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
COG5064 :Pssm-ID: 227396 [Multi-domain]
Cd Length: 526
Bit Score: 49.12
E-value: 2.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 441 QL L Q G L QAS D ES QQLQAV IEMCQ LL VMGNEETLGGFPVKS VVP ALITLLQ m E HNF D IMN - H A CR ALT YMMEALPRSSA VV 519
Cdd:COG5064 75 QL T Q Q L FSD D IE QQLQAV YKFRK LL SKETSPPIQPVIDAG VVP RFVEFMD - E IQR D MLQ f E A AW ALT NIASGTTQQTK VV 153
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 520 VD -- A I P V F LEK L QVIQ c I DV A EQA LT AL EML --- S RRHSKAI LQ A G G L ADC L LY L EFFS I NAQ -- RNA LAIAA N C C QSI 592
Cdd:COG5064 154 VD ag A V P L F IQL L SSTE - D DV R EQA VW AL GNI agd S EGCRDYV LQ C G A L EPL L GL L LSSA I HIS ml RNA TWTLS N L C RGK 232
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 929653749 593 T P D - EFHFVADS LP L L TQRLTHQ D KKSVEST C LCFAR L V D NFQHEENLLQQ V ASK ---- D LL TN v QQLLVV TP PIL S S G 666
Cdd:COG5064 233 N P P p DWSNISQA LP I L AKLIYSR D PEVLVDA C WAISY L S D GPNEKIQAVLD V GIP grlv E LL SH - ESAKIQ TP ALR S V G 310
PHA03307 super family
cl33723 transcriptional regulator ICP4; Provisional
2-420
7.40e-03
transcriptional regulator ICP4; Provisional
PHA03307 :Pssm-ID: 223039 [Multi-domain]
Cd Length: 1352
Bit Score: 41.31
E-value: 7.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 2 S N RPNNN P GG SL R r SQRNTAG A QPQDDSIG G R S CSSSSAVIV P QPED P DRAN t SERQKTGQVPKKDNSRGVKRSASPDYN 81
Cdd:PHA03307 81 A N ESRST P TW SL S - TLAPASP A REGSPTPP G P S SPDPPPPTP P PASP P PSPA - PDLSEMLRPVGSPGPPPAASPPAAGAS 158
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 82 RTNSP S S A KKPK ---- A L QHT E SPSETNKPHSKSKKRHLDQEQQLKSAQSP S TSKAHTRK S G A TGGS RS QKRKRTE SS CV 157
Cdd:PHA03307 159 PAAVA S D A ASSR qaal P L SSP E ETARAPSSPPAEPPPSTPPAAASPRPPRR S SPISASAS S P A PAPG RS AADDAGA SS SD 238
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 158 K S G S G S EST G AEERSAK P TKLASKSATS akagc ST I TDS S SAAST SS SSSAVA S A SS TVPPGARVKQGKD q NKARRSR S A 237
Cdd:PHA03307 239 S S S S E S SGC G WGPENEC P LPRPAPITLP ----- TR I WEA S GWNGP SS RPGPAS S S SS PRERSPSPSPSSP - GSGPAPS S P 312
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 238 SSP S PRR SSRE KEQ S K T GG SS KFDWA A RF SP K vslpktkl SL P GS S K S ETSK P G P SG lqaklasl RK S TK KR --- S ES P P 314
Cdd:PHA03307 313 RAS S SSS SSRE SSS S S T SS SS ESSRG A AV SP G -------- PS P SR S P S PSRP P P P AD -------- PS S PR KR prp S RA P S 376
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 315 AELP S LR R S TR QKTTGSC A STS RR GSGL G KRG A AEA R RQEKM A D pesnqea VN S S A ARTDEAP qgaagavg M T T SGE S -- 392
Cdd:PHA03307 377 SPAA S AG R P TR RRARAAV A GRA RR RDAT G RFP A GRP R PSPLD A G ------- AA S G A FYARYPL -------- L T P SGE P wp 441
410 420
....*....|....*....|....*...
gi 929653749 393 E S DDSEM GR L qallearglpph LF G P LG 420
Cdd:PHA03307 442 G S PPPPP GR V ------------ RY G G LG 457
Name
Accession
Description
Interval
E-value
HECTc
cd00078 HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It ...
1590-1990
1.76e-128
HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.
Pssm-ID: 238033 [Multi-domain]
Cd Length: 352
Bit Score: 407.34
E-value: 1.76e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1590 K R TV N R EEL L KQ A ESVMQDLG SS -- RAM LE IQYEN E V G TG - L G P T L EF YA LVS Q EL QRADL GL W R geevtlsnpkgsqeg 1666
Cdd:cd00078 2 K I TV R R DRI L ED A LRQLSKVS SS dl KKV LE VEFVG E E G ID a G G V T R EF FT LVS K EL FNPSY GL F R --------------- 66
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1667 tk Y IQNLQ GL FALP fgrt AKPAHIAKVKMK FRFLG K L MA KA IMDF RL V DLP LGLP FYK WM L RQ et S L TSH DL FDI DP VVA 1746
Cdd:cd00078 67 -- Y TPDDS GL LYPN ---- PSSFADEDHLKL FRFLG R L LG KA LYEG RL L DLP FSRA FYK KL L GK -- P L SLE DL EEL DP ELY 138
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1747 R S VYH L E D IVRQKKR LE Q dksqtkeslqyale T L T MN gcsvedlg LD FTLP G FPNI ELK K GG K DIPVT IH N L EEY LR L VI 1826
Cdd:cd00078 139 K S LKE L L D NDGDEDD LE L -------------- T F T IE -------- LD SSFG G AVTV ELK P GG R DIPVT NE N K EEY VD L YV 196
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1827 FWA LN E G VSR Q FDS FRDGF ES V F P LSH L QY F Y PEEL DQ L L CGS ka DTW D AKT L MECCRPDH GY TH DS RAVKFLF E I L S SF 1906
Cdd:cd00078 197 DYR LN K G IEE Q VEA FRDGF SE V I P EEL L SL F T PEEL EL L I CGS -- EDI D LED L KKNTEYKG GY SS DS PTIQWFW E V L E SF 274
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1907 D NE QQRL FLQFVTGS P RLPVGGF RS LNP PL TI V R K tfest EN PDD F LP SVM TC V N Y LKLP D YSS I EI M REKLL I A AR EG q 1986
Cdd:cd00078 275 T NE ERKK FLQFVTGS S RLPVGGF AD LNP KF TI R R V ----- GS PDD R LP TAH TC F N L LKLP P YSS K EI L REKLL Y A IN EG - 348
....
gi 929653749 1987 QS F H 1990
Cdd:cd00078 349 AG F G 352
HECTc
smart00119 Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to ...
1608-1986
3.30e-126
Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to E2 enzymes.
Pssm-ID: 214523
Cd Length: 328
Bit Score: 399.69
E-value: 3.30e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1608 DL GSSR am LEI QY E N E V G - T G L G P T L EF YA L V S Q EL QRA D L GL W R geevtlsnpkgsqegtk Y IQ N LQG L FAL P FGRT A K 1686
Cdd:smart00119 1 DL KKRV -- LEI EF E G E E G l D G G G V T R EF FF L L S K EL FNP D Y GL F R ----------------- Y SP N DYL L YPN P RSGF A N 61
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1687 PA H I akvk MK FRF L G KLMA KA IM D F RL V DL PLGL PFYK WM L R qe TSL T S HDL FDI DP VVAR S VYH L edivrqkk R L EQ D K 1766
Cdd:smart00119 62 EE H L ---- SY FRF I G RVLG KA LY D N RL L DL FFAR PFYK KL L G -- KPV T L HDL ESL DP ELYK S LKW L -------- L L NN D T 127
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1767 S qtkeslq YA L ET ltmngcs VEDLG L DFTLPGFPNI ELK K GG KD IPVT IH N LE EY LR LVI FWA LN E G VSR Q FDS FR D GF E 1846
Cdd:smart00119 128 S ------- EE L DL ------- TFSIV L TSEFGQVKVV ELK P GG SN IPVT EE N KK EY VH LVI EYR LN K G IEK Q LEA FR E GF S 193
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1847 S V F P LSH L QY F Y PEEL DQ L L CGS K ad TW D AKT L MECCRPDH GY THD S RAV K FLF E ILS SF D NE QQ R LF LQFVTGS P RLPV 1926
Cdd:smart00119 194 E V I P ENL L KL F D PEEL EL L I CGS P -- EI D VDD L KSNTEYKG GY SAN S QTI K WFW E VVE SF T NE ER R KL LQFVTGS S RLPV 271
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1927 GGF RS L N P PL TI VRKTFE stenp D DF LP SVM TC V N Y LKLP D YSS I EI M REKLL I A AR EG Q 1986
Cdd:smart00119 272 GGF AA L S P KF TI RKAGSD ----- D ER LP TAH TC F N R LKLP P YSS K EI L REKLL L A IN EG K 326
HECT
pfam00632 HECT-domain (ubiquitin-transferase); The name HECT comes from Homologous to the E6-AP Carboxyl ...
1637-1992
1.24e-103
HECT-domain (ubiquitin-transferase); The name HECT comes from Homologous to the E6-AP Carboxyl Terminus.
Pssm-ID: 459880
Cd Length: 304
Bit Score: 334.58
E-value: 1.24e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1637 L V S Q EL QRADL GL WRG E evtlsnpkgs Q E GTKYI qnlqglfal P F GRTAKPAHIAKVKMK F R FLGKL MA KAI MDFR L V DL 1716
Cdd:pfam00632 2 L L S K EL FDPNY GL FEY E ---------- T E DDRTY --------- W F NPSSSESPDLELLDY F K FLGKL LG KAI YNGI L L DL 62
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1717 P LGLP FYK WM L RQE ts LT SH DL FD IDP VVAR S VYH L edivrqkkrleqdksqtkeslqyalet L T M NGCSV EDLGL D FT L 1796
Cdd:pfam00632 63 P FPPF FYK KL L GEP -- LT LE DL ES IDP ELYK S LKS L --------------------------- L N M DNDDD EDLGL T FT I 113
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1797 P G F --- PN IEL KKG G KD IPVT IH N L EEY L RL VIFWA LN EGVSR Q FDS FR D GF E SV F P LSH L QY F Y PEEL DQ L L CGS ka DT 1873
Cdd:pfam00632 114 P V F ges KT IEL IPN G RN IPVT NE N K EEY I RL YVDYR LN KSIEP Q LEA FR K GF Y SV I P KEA L SL F T PEEL EL L I CGS -- PE 191
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1874 W D AKT L MECCRP D H GYT HD S RAVKFLF EIL SS F DN EQ Q RLFL Q FVTGS P RLPVGGF R SL n P PL TIVRK TF este NP DD F L 1953
Cdd:pfam00632 192 I D VED L KKNTEY D G GYT KN S PTIQWFW EIL EE F SP EQ R RLFL K FVTGS S RLPVGGF K SL - P KF TIVRK GG ---- DD DD R L 266
330 340 350
....*....|....*....|....*....|....*....
gi 929653749 1954 P SVM TC V N Y LKLPDYSS I EI MR EKLLIA AR EG q QS F H LS 1992
Cdd:pfam00632 267 P TAH TC F N R LKLPDYSS K EI LK EKLLIA IE EG - EG F G LS 304
HUL4
COG5021 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones];
1500-1991
3.52e-80
Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227354 [Multi-domain]
Cd Length: 872
Bit Score: 285.12
E-value: 3.52e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1500 T S EFINSKLTAKAN R QLQDPLVIMTGNIPTWLTEL G ktc P FFFPFD TR QMLF Y VTA F DRD R AMQRLLDTNP einq SD S QD 1579
Cdd:COG5021 410 S S STYEDLRREQLG R ESDESFYVASNVQQQRASRE G --- P LLSGWK TR LNNL Y RFY F VEH R KKTLTKNDSR ---- LG S FI 482
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1580 S RVAPRLD R K K RTVN R EELLKQAESVM ----- QDLGSS R AM ---- LEIQYEN E V G TG L GP TLE FYALVSQELQRAD L GLW 1650
Cdd:COG5021 483 S LNKLDIR R I K EDKR R KLFYSLKQKAK ifdpy LHIKVR R DR vfed SYREIMD E S G DD L KK TLE IEFVGEEGIDAGG L TRE 562
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1651 R ge EVT LS NPKGSQEGTKYIQNLQG L FA LP FGRTA -- K P A H IAK vkmk F R FLG KLMA KAI M D F R LV D LPLGLP FYK WM L R 1728
Cdd:COG5021 563 W -- LFL LS KEMFNPDYGLFEYITED L YT LP INPLS si N P E H LSY ---- F K FLG RVIG KAI Y D S R IL D VQFSKA FYK KL L G 636
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1729 Q et SLTSH DL FDI DP VVA RS V yhledivrq KKR L EQ D K sq TKES L qyale T LT M ngc S VED LGLDFTLP gfpn I EL KKG G 1808
Cdd:COG5021 637 K -- PVSLV DL ESL DP ELY RS L --------- VWL L NN D I -- DETI L ----- D LT F --- T VED DSFGESRT ---- V EL IPN G 691
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1809 KD I P VT IH N LE EY LRL V IFWA LN EG V SR QF DS F RD GF ESVF P LSH LQ Y F YPE EL DQ L LC G S k ADTW D AKTLMECCR p D HG 1888
Cdd:COG5021 692 RN I S VT NE N KK EY VKK V VDYK LN KR V EK QF SA F KS GF SEII P PDL LQ I F DES EL EL L IG G I - PEDI D IDDWKSNTA - Y HG 769
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1889 YT H DS RAVKFLF EI L S S FD N E QQRLF LQFVTG SP R L P VG GF RS L NPPLTIVRK T F E STENP DD F LPS VM TC V N Y LKLP D Y 1968
Cdd:COG5021 770 YT E DS PIIVWFW EI I S E FD F E ERAKL LQFVTG TS R I P IN GF KD L QGSDGVRKF T I E KGGTD DD R LPS AH TC F N R LKLP E Y 849
490 500
....*....|....*....|...
gi 929653749 1969 SS I E IM R E KLL I A AR EG QQSFH L 1991
Cdd:COG5021 850 SS K E KL R S KLL T A IN EG AGFGL L 872
WWE
pfam02825 WWE domain; The WWE domain is named after three of its conserved residues and is predicted to ...
762-798
9.51e-09
WWE domain; The WWE domain is named after three of its conserved residues and is predicted to mediate specific protein- protein interactions in ubiquitin and ADP ribose conjugation systems.
Pssm-ID: 460715 [Multi-domain]
Cd Length: 66
Bit Score: 53.45
E-value: 9.51e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 929653749 762 I W Q W R DD R G L WHPY NRID S RI IE ----------------------------- Q I N E DTGT A R AIQ R 798
Cdd:pfam02825 1 V W E W E DD N G G WHPY DPEV S SL IE eayqkgkpsvdlsittagfpytidfksmt Q T N K DTGT T R PVR R 66
SRP1
COG5064 Karyopherin (importin) alpha [Intracellular trafficking and secretion];
441-666
2.41e-05
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
Pssm-ID: 227396 [Multi-domain]
Cd Length: 526
Bit Score: 49.12
E-value: 2.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 441 QL L Q G L QAS D ES QQLQAV IEMCQ LL VMGNEETLGGFPVKS VVP ALITLLQ m E HNF D IMN - H A CR ALT YMMEALPRSSA VV 519
Cdd:COG5064 75 QL T Q Q L FSD D IE QQLQAV YKFRK LL SKETSPPIQPVIDAG VVP RFVEFMD - E IQR D MLQ f E A AW ALT NIASGTTQQTK VV 153
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 520 VD -- A I P V F LEK L QVIQ c I DV A EQA LT AL EML --- S RRHSKAI LQ A G G L ADC L LY L EFFS I NAQ -- RNA LAIAA N C C QSI 592
Cdd:COG5064 154 VD ag A V P L F IQL L SSTE - D DV R EQA VW AL GNI agd S EGCRDYV LQ C G A L EPL L GL L LSSA I HIS ml RNA TWTLS N L C RGK 232
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 929653749 593 T P D - EFHFVADS LP L L TQRLTHQ D KKSVEST C LCFAR L V D NFQHEENLLQQ V ASK ---- D LL TN v QQLLVV TP PIL S S G 666
Cdd:COG5064 233 N P P p DWSNISQA LP I L AKLIYSR D PEVLVDA C WAISY L S D GPNEKIQAVLD V GIP grlv E LL SH - ESAKIQ TP ALR S V G 310
WWE
smart00678 Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated ...
762-802
2.87e-05
Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis;
Pssm-ID: 128922 [Multi-domain]
Cd Length: 73
Bit Score: 43.87
E-value: 2.87e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 929653749 762 I W QWRDDR G L W H PY NRID S RI IE --------------------------- Q I N ED TGT A R AIQ R KPNP 802
Cdd:smart00678 2 V W EYEGRN G K W W PY DPRV S ED IE eayaagkklcelsicgfpytidfnamt Q Y N QA TGT T R KVR R VTYS 69
PHA03307
PHA03307 transcriptional regulator ICP4; Provisional
2-420
7.40e-03
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain]
Cd Length: 1352
Bit Score: 41.31
E-value: 7.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 2 S N RPNNN P GG SL R r SQRNTAG A QPQDDSIG G R S CSSSSAVIV P QPED P DRAN t SERQKTGQVPKKDNSRGVKRSASPDYN 81
Cdd:PHA03307 81 A N ESRST P TW SL S - TLAPASP A REGSPTPP G P S SPDPPPPTP P PASP P PSPA - PDLSEMLRPVGSPGPPPAASPPAAGAS 158
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 82 RTNSP S S A KKPK ---- A L QHT E SPSETNKPHSKSKKRHLDQEQQLKSAQSP S TSKAHTRK S G A TGGS RS QKRKRTE SS CV 157
Cdd:PHA03307 159 PAAVA S D A ASSR qaal P L SSP E ETARAPSSPPAEPPPSTPPAAASPRPPRR S SPISASAS S P A PAPG RS AADDAGA SS SD 238
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 158 K S G S G S EST G AEERSAK P TKLASKSATS akagc ST I TDS S SAAST SS SSSAVA S A SS TVPPGARVKQGKD q NKARRSR S A 237
Cdd:PHA03307 239 S S S S E S SGC G WGPENEC P LPRPAPITLP ----- TR I WEA S GWNGP SS RPGPAS S S SS PRERSPSPSPSSP - GSGPAPS S P 312
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 238 SSP S PRR SSRE KEQ S K T GG SS KFDWA A RF SP K vslpktkl SL P GS S K S ETSK P G P SG lqaklasl RK S TK KR --- S ES P P 314
Cdd:PHA03307 313 RAS S SSS SSRE SSS S S T SS SS ESSRG A AV SP G -------- PS P SR S P S PSRP P P P AD -------- PS S PR KR prp S RA P S 376
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 315 AELP S LR R S TR QKTTGSC A STS RR GSGL G KRG A AEA R RQEKM A D pesnqea VN S S A ARTDEAP qgaagavg M T T SGE S -- 392
Cdd:PHA03307 377 SPAA S AG R P TR RRARAAV A GRA RR RDAT G RFP A GRP R PSPLD A G ------- AA S G A FYARYPL -------- L T P SGE P wp 441
410 420
....*....|....*....|....*...
gi 929653749 393 E S DDSEM GR L qallearglpph LF G P LG 420
Cdd:PHA03307 442 G S PPPPP GR V ------------ RY G G LG 457
Name
Accession
Description
Interval
E-value
HECTc
cd00078 HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It ...
1590-1990
1.76e-128
HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.
Pssm-ID: 238033 [Multi-domain]
Cd Length: 352
Bit Score: 407.34
E-value: 1.76e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1590 K R TV N R EEL L KQ A ESVMQDLG SS -- RAM LE IQYEN E V G TG - L G P T L EF YA LVS Q EL QRADL GL W R geevtlsnpkgsqeg 1666
Cdd:cd00078 2 K I TV R R DRI L ED A LRQLSKVS SS dl KKV LE VEFVG E E G ID a G G V T R EF FT LVS K EL FNPSY GL F R --------------- 66
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1667 tk Y IQNLQ GL FALP fgrt AKPAHIAKVKMK FRFLG K L MA KA IMDF RL V DLP LGLP FYK WM L RQ et S L TSH DL FDI DP VVA 1746
Cdd:cd00078 67 -- Y TPDDS GL LYPN ---- PSSFADEDHLKL FRFLG R L LG KA LYEG RL L DLP FSRA FYK KL L GK -- P L SLE DL EEL DP ELY 138
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1747 R S VYH L E D IVRQKKR LE Q dksqtkeslqyale T L T MN gcsvedlg LD FTLP G FPNI ELK K GG K DIPVT IH N L EEY LR L VI 1826
Cdd:cd00078 139 K S LKE L L D NDGDEDD LE L -------------- T F T IE -------- LD SSFG G AVTV ELK P GG R DIPVT NE N K EEY VD L YV 196
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1827 FWA LN E G VSR Q FDS FRDGF ES V F P LSH L QY F Y PEEL DQ L L CGS ka DTW D AKT L MECCRPDH GY TH DS RAVKFLF E I L S SF 1906
Cdd:cd00078 197 DYR LN K G IEE Q VEA FRDGF SE V I P EEL L SL F T PEEL EL L I CGS -- EDI D LED L KKNTEYKG GY SS DS PTIQWFW E V L E SF 274
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1907 D NE QQRL FLQFVTGS P RLPVGGF RS LNP PL TI V R K tfest EN PDD F LP SVM TC V N Y LKLP D YSS I EI M REKLL I A AR EG q 1986
Cdd:cd00078 275 T NE ERKK FLQFVTGS S RLPVGGF AD LNP KF TI R R V ----- GS PDD R LP TAH TC F N L LKLP P YSS K EI L REKLL Y A IN EG - 348
....
gi 929653749 1987 QS F H 1990
Cdd:cd00078 349 AG F G 352
HECTc
smart00119 Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to ...
1608-1986
3.30e-126
Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to E2 enzymes.
Pssm-ID: 214523
Cd Length: 328
Bit Score: 399.69
E-value: 3.30e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1608 DL GSSR am LEI QY E N E V G - T G L G P T L EF YA L V S Q EL QRA D L GL W R geevtlsnpkgsqegtk Y IQ N LQG L FAL P FGRT A K 1686
Cdd:smart00119 1 DL KKRV -- LEI EF E G E E G l D G G G V T R EF FF L L S K EL FNP D Y GL F R ----------------- Y SP N DYL L YPN P RSGF A N 61
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1687 PA H I akvk MK FRF L G KLMA KA IM D F RL V DL PLGL PFYK WM L R qe TSL T S HDL FDI DP VVAR S VYH L edivrqkk R L EQ D K 1766
Cdd:smart00119 62 EE H L ---- SY FRF I G RVLG KA LY D N RL L DL FFAR PFYK KL L G -- KPV T L HDL ESL DP ELYK S LKW L -------- L L NN D T 127
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1767 S qtkeslq YA L ET ltmngcs VEDLG L DFTLPGFPNI ELK K GG KD IPVT IH N LE EY LR LVI FWA LN E G VSR Q FDS FR D GF E 1846
Cdd:smart00119 128 S ------- EE L DL ------- TFSIV L TSEFGQVKVV ELK P GG SN IPVT EE N KK EY VH LVI EYR LN K G IEK Q LEA FR E GF S 193
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1847 S V F P LSH L QY F Y PEEL DQ L L CGS K ad TW D AKT L MECCRPDH GY THD S RAV K FLF E ILS SF D NE QQ R LF LQFVTGS P RLPV 1926
Cdd:smart00119 194 E V I P ENL L KL F D PEEL EL L I CGS P -- EI D VDD L KSNTEYKG GY SAN S QTI K WFW E VVE SF T NE ER R KL LQFVTGS S RLPV 271
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1927 GGF RS L N P PL TI VRKTFE stenp D DF LP SVM TC V N Y LKLP D YSS I EI M REKLL I A AR EG Q 1986
Cdd:smart00119 272 GGF AA L S P KF TI RKAGSD ----- D ER LP TAH TC F N R LKLP P YSS K EI L REKLL L A IN EG K 326
HECT
pfam00632 HECT-domain (ubiquitin-transferase); The name HECT comes from Homologous to the E6-AP Carboxyl ...
1637-1992
1.24e-103
HECT-domain (ubiquitin-transferase); The name HECT comes from Homologous to the E6-AP Carboxyl Terminus.
Pssm-ID: 459880
Cd Length: 304
Bit Score: 334.58
E-value: 1.24e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1637 L V S Q EL QRADL GL WRG E evtlsnpkgs Q E GTKYI qnlqglfal P F GRTAKPAHIAKVKMK F R FLGKL MA KAI MDFR L V DL 1716
Cdd:pfam00632 2 L L S K EL FDPNY GL FEY E ---------- T E DDRTY --------- W F NPSSSESPDLELLDY F K FLGKL LG KAI YNGI L L DL 62
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1717 P LGLP FYK WM L RQE ts LT SH DL FD IDP VVAR S VYH L edivrqkkrleqdksqtkeslqyalet L T M NGCSV EDLGL D FT L 1796
Cdd:pfam00632 63 P FPPF FYK KL L GEP -- LT LE DL ES IDP ELYK S LKS L --------------------------- L N M DNDDD EDLGL T FT I 113
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1797 P G F --- PN IEL KKG G KD IPVT IH N L EEY L RL VIFWA LN EGVSR Q FDS FR D GF E SV F P LSH L QY F Y PEEL DQ L L CGS ka DT 1873
Cdd:pfam00632 114 P V F ges KT IEL IPN G RN IPVT NE N K EEY I RL YVDYR LN KSIEP Q LEA FR K GF Y SV I P KEA L SL F T PEEL EL L I CGS -- PE 191
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1874 W D AKT L MECCRP D H GYT HD S RAVKFLF EIL SS F DN EQ Q RLFL Q FVTGS P RLPVGGF R SL n P PL TIVRK TF este NP DD F L 1953
Cdd:pfam00632 192 I D VED L KKNTEY D G GYT KN S PTIQWFW EIL EE F SP EQ R RLFL K FVTGS S RLPVGGF K SL - P KF TIVRK GG ---- DD DD R L 266
330 340 350
....*....|....*....|....*....|....*....
gi 929653749 1954 P SVM TC V N Y LKLPDYSS I EI MR EKLLIA AR EG q QS F H LS 1992
Cdd:pfam00632 267 P TAH TC F N R LKLPDYSS K EI LK EKLLIA IE EG - EG F G LS 304
HUL4
COG5021 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones];
1500-1991
3.52e-80
Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227354 [Multi-domain]
Cd Length: 872
Bit Score: 285.12
E-value: 3.52e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1500 T S EFINSKLTAKAN R QLQDPLVIMTGNIPTWLTEL G ktc P FFFPFD TR QMLF Y VTA F DRD R AMQRLLDTNP einq SD S QD 1579
Cdd:COG5021 410 S S STYEDLRREQLG R ESDESFYVASNVQQQRASRE G --- P LLSGWK TR LNNL Y RFY F VEH R KKTLTKNDSR ---- LG S FI 482
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1580 S RVAPRLD R K K RTVN R EELLKQAESVM ----- QDLGSS R AM ---- LEIQYEN E V G TG L GP TLE FYALVSQELQRAD L GLW 1650
Cdd:COG5021 483 S LNKLDIR R I K EDKR R KLFYSLKQKAK ifdpy LHIKVR R DR vfed SYREIMD E S G DD L KK TLE IEFVGEEGIDAGG L TRE 562
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1651 R ge EVT LS NPKGSQEGTKYIQNLQG L FA LP FGRTA -- K P A H IAK vkmk F R FLG KLMA KAI M D F R LV D LPLGLP FYK WM L R 1728
Cdd:COG5021 563 W -- LFL LS KEMFNPDYGLFEYITED L YT LP INPLS si N P E H LSY ---- F K FLG RVIG KAI Y D S R IL D VQFSKA FYK KL L G 636
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1729 Q et SLTSH DL FDI DP VVA RS V yhledivrq KKR L EQ D K sq TKES L qyale T LT M ngc S VED LGLDFTLP gfpn I EL KKG G 1808
Cdd:COG5021 637 K -- PVSLV DL ESL DP ELY RS L --------- VWL L NN D I -- DETI L ----- D LT F --- T VED DSFGESRT ---- V EL IPN G 691
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1809 KD I P VT IH N LE EY LRL V IFWA LN EG V SR QF DS F RD GF ESVF P LSH LQ Y F YPE EL DQ L LC G S k ADTW D AKTLMECCR p D HG 1888
Cdd:COG5021 692 RN I S VT NE N KK EY VKK V VDYK LN KR V EK QF SA F KS GF SEII P PDL LQ I F DES EL EL L IG G I - PEDI D IDDWKSNTA - Y HG 769
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 1889 YT H DS RAVKFLF EI L S S FD N E QQRLF LQFVTG SP R L P VG GF RS L NPPLTIVRK T F E STENP DD F LPS VM TC V N Y LKLP D Y 1968
Cdd:COG5021 770 YT E DS PIIVWFW EI I S E FD F E ERAKL LQFVTG TS R I P IN GF KD L QGSDGVRKF T I E KGGTD DD R LPS AH TC F N R LKLP E Y 849
490 500
....*....|....*....|...
gi 929653749 1969 SS I E IM R E KLL I A AR EG QQSFH L 1991
Cdd:COG5021 850 SS K E KL R S KLL T A IN EG AGFGL L 872
WWE
pfam02825 WWE domain; The WWE domain is named after three of its conserved residues and is predicted to ...
762-798
9.51e-09
WWE domain; The WWE domain is named after three of its conserved residues and is predicted to mediate specific protein- protein interactions in ubiquitin and ADP ribose conjugation systems.
Pssm-ID: 460715 [Multi-domain]
Cd Length: 66
Bit Score: 53.45
E-value: 9.51e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 929653749 762 I W Q W R DD R G L WHPY NRID S RI IE ----------------------------- Q I N E DTGT A R AIQ R 798
Cdd:pfam02825 1 V W E W E DD N G G WHPY DPEV S SL IE eayqkgkpsvdlsittagfpytidfksmt Q T N K DTGT T R PVR R 66
SRP1
COG5064 Karyopherin (importin) alpha [Intracellular trafficking and secretion];
441-666
2.41e-05
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
Pssm-ID: 227396 [Multi-domain]
Cd Length: 526
Bit Score: 49.12
E-value: 2.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 441 QL L Q G L QAS D ES QQLQAV IEMCQ LL VMGNEETLGGFPVKS VVP ALITLLQ m E HNF D IMN - H A CR ALT YMMEALPRSSA VV 519
Cdd:COG5064 75 QL T Q Q L FSD D IE QQLQAV YKFRK LL SKETSPPIQPVIDAG VVP RFVEFMD - E IQR D MLQ f E A AW ALT NIASGTTQQTK VV 153
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 520 VD -- A I P V F LEK L QVIQ c I DV A EQA LT AL EML --- S RRHSKAI LQ A G G L ADC L LY L EFFS I NAQ -- RNA LAIAA N C C QSI 592
Cdd:COG5064 154 VD ag A V P L F IQL L SSTE - D DV R EQA VW AL GNI agd S EGCRDYV LQ C G A L EPL L GL L LSSA I HIS ml RNA TWTLS N L C RGK 232
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 929653749 593 T P D - EFHFVADS LP L L TQRLTHQ D KKSVEST C LCFAR L V D NFQHEENLLQQ V ASK ---- D LL TN v QQLLVV TP PIL S S G 666
Cdd:COG5064 233 N P P p DWSNISQA LP I L AKLIYSR D PEVLVDA C WAISY L S D GPNEKIQAVLD V GIP grlv E LL SH - ESAKIQ TP ALR S V G 310
WWE
smart00678 Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated ...
762-802
2.87e-05
Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis;
Pssm-ID: 128922 [Multi-domain]
Cd Length: 73
Bit Score: 43.87
E-value: 2.87e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 929653749 762 I W QWRDDR G L W H PY NRID S RI IE --------------------------- Q I N ED TGT A R AIQ R KPNP 802
Cdd:smart00678 2 V W EYEGRN G K W W PY DPRV S ED IE eayaagkklcelsicgfpytidfnamt Q Y N QA TGT T R KVR R VTYS 69
PHA03307
PHA03307 transcriptional regulator ICP4; Provisional
2-420
7.40e-03
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain]
Cd Length: 1352
Bit Score: 41.31
E-value: 7.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 2 S N RPNNN P GG SL R r SQRNTAG A QPQDDSIG G R S CSSSSAVIV P QPED P DRAN t SERQKTGQVPKKDNSRGVKRSASPDYN 81
Cdd:PHA03307 81 A N ESRST P TW SL S - TLAPASP A REGSPTPP G P S SPDPPPPTP P PASP P PSPA - PDLSEMLRPVGSPGPPPAASPPAAGAS 158
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 82 RTNSP S S A KKPK ---- A L QHT E SPSETNKPHSKSKKRHLDQEQQLKSAQSP S TSKAHTRK S G A TGGS RS QKRKRTE SS CV 157
Cdd:PHA03307 159 PAAVA S D A ASSR qaal P L SSP E ETARAPSSPPAEPPPSTPPAAASPRPPRR S SPISASAS S P A PAPG RS AADDAGA SS SD 238
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 158 K S G S G S EST G AEERSAK P TKLASKSATS akagc ST I TDS S SAAST SS SSSAVA S A SS TVPPGARVKQGKD q NKARRSR S A 237
Cdd:PHA03307 239 S S S S E S SGC G WGPENEC P LPRPAPITLP ----- TR I WEA S GWNGP SS RPGPAS S S SS PRERSPSPSPSSP - GSGPAPS S P 312
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 238 SSP S PRR SSRE KEQ S K T GG SS KFDWA A RF SP K vslpktkl SL P GS S K S ETSK P G P SG lqaklasl RK S TK KR --- S ES P P 314
Cdd:PHA03307 313 RAS S SSS SSRE SSS S S T SS SS ESSRG A AV SP G -------- PS P SR S P S PSRP P P P AD -------- PS S PR KR prp S RA P S 376
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 929653749 315 AELP S LR R S TR QKTTGSC A STS RR GSGL G KRG A AEA R RQEKM A D pesnqea VN S S A ARTDEAP qgaagavg M T T SGE S -- 392
Cdd:PHA03307 377 SPAA S AG R P TR RRARAAV A GRA RR RDAT G RFP A GRP R PSPLD A G ------- AA S G A FYARYPL -------- L T P SGE P wp 441
410 420
....*....|....*....|....*...
gi 929653749 393 E S DDSEM GR L qallearglpph LF G P LG 420
Cdd:PHA03307 442 G S PPPPP GR V ------------ RY G G LG 457
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
