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Conserved domains on  [gi|927372389|ref|YP_009164673|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Forpus passerinus]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.30e-41

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 131.89  E-value: 1.30e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 927372389 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.30e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 131.89  E-value: 1.30e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 927372389 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.23e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 63.35  E-value: 1.23e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  11 AFALSSLGLAFHRtHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 927372389  91 QNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 5.54e-06

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 41.20  E-value: 5.54e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAfALSSLGL--AFHRTHLISALLCLESMMLSMYIAL-STWPIENQTPSLTLTpIFMLTFAACEAGTGLAM 77
Cdd:COG0713   1 IPLEHYLILAA-ILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLvAFSRYLGDLDGQVFA-LFVIAVAAAEVAVGLAI 78

                        90
                ....*....|....*....
gi 927372389 78 LVASTRTHGSDHLQNLNLL 96
Cdd:COG0713  79 IVALYRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.30e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 131.89  E-value: 1.30e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 927372389 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.07e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 122.79  E-value: 4.07e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVA 80
Cdd:MTH00067  1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                        90
                ....*....|....*...
gi 927372389 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00067 81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.18e-37

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 121.61  E-value: 1.18e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVA 80
Cdd:MTH00126  1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                        90
                ....*....|....*...
gi 927372389 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00126 81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 6.13e-25

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 89.60  E-value: 6.13e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVA 80
Cdd:MTH00107  1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                        90
                ....*....|....*...
gi 927372389 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00107 81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 1.76e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 78.06  E-value: 1.76e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  4 LHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVASTR 83
Cdd:MTH00181  1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                        90
                ....*....|...
gi 927372389 84 THGSDHLQNLNLL 96
Cdd:MTH00181 81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 5.03e-16

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 66.87  E-value: 5.03e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVA 80
Cdd:MTH00043  1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                        90
                ....*....|....*..
gi 927372389 81 STRTHGSDHLQNLNLLQ 97
Cdd:MTH00043 81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.23e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 63.35  E-value: 1.23e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  11 AFALSSLGLAFHRtHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 927372389  91 QNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-98 8.25e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.44  E-value: 8.25e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  6 LSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIEnqTPSLTLTPIFMLTFAACEAGTGLAMLVASTRTH 85
Cdd:MTH00188  7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSY--MEKELYLSLVLLTFAACEASVGLALLVSLIRSH 84

                        90
                ....*....|...
gi 927372389 86 GSDHLQNLNLLQC 98
Cdd:MTH00188 85 GSDYVSSLNLIKC 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-92 1.37e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 45.15  E-value: 1.37e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLtpIFMLTFAACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:MTH00162 11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFL--LFFLTFSVCEGALGLSILVSMIRSHGNDYFS 88


                .
gi 927372389 92 N 92
Cdd:MTH00162 89 S 89
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.82e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 45.02  E-value: 1.82e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:MTH00180 13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                ....*.
gi 927372389 92 NLNLLQ 97
Cdd:MTH00180 93 SLNLLR 98
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 12-98 2.98e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 44.45  E-value: 2.98e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIAL-STWPIENQTPSLTLtpiFMLTFAACEAGTGLAMLVASTRTHGSDHL 90
Cdd:MTH00149 13 FLMGVFALLFQYKHLLSILLSLEALMLSLLVMMfSSSGLISFSSYLFL---IILTFGACEASLGLSLLVSLIRLHGNDYV 89


                ....*...
gi 927372389 91 QNLNLLQC 98
Cdd:MTH00149 90 SSLSSLKF 97
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-96 4.25e-07

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 44.01  E-value: 4.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389   1 MPLLHLSFYSA--FALSSLGLaFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAML 78
Cdd:PRK05715   2 IPLQHYLILAAilFCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                         90
                 ....*....|....*...
gi 927372389  79 VASTRTHGSDHLQNLNLL 96
Cdd:PRK05715  81 LQLYRNRGTIDVDDLNEL 98
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 7.21e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 43.51  E-value: 7.21e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIALSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:MTH00001 13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                ....*.
gi 927372389 92 NLNLLQ 97
Cdd:MTH00001 93 SLNSLR 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-98 2.18e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 42.05  E-value: 2.18e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389 12 FALSSLGLAFHRTHLISALLCLESMMLSMYIaLSTWPIENQTPSLTLTPIFMLTFAACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:MTH00013 12 PFISMFNLSLQRKHLLMSLLSLEAMILSLAL-FIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLK 90


                ....*..
gi 927372389 92 NLNLLQC 98
Cdd:MTH00013 91 SLTSNKC 97
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 5.54e-06

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 41.20  E-value: 5.54e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389  1 MPLLHLSFYSAfALSSLGL--AFHRTHLISALLCLESMMLSMYIAL-STWPIENQTPSLTLTpIFMLTFAACEAGTGLAM 77
Cdd:COG0713   1 IPLEHYLILAA-ILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLvAFSRYLGDLDGQVFA-LFVIAVAAAEVAVGLAI 78

                        90
                ....*....|....*....
gi 927372389 78 LVASTRTHGSDHLQNLNLL 96
Cdd:COG0713  79 IVALYRNRGTIDVDDLNEL 97
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 59-98 5.20e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 37.24  E-value: 5.20e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 927372389  59 TPIFMLTFAACEAGTGLAMLVASTRTHGSDHLQNLNLLQC 98
Cdd:MTH00127 393 TLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
ndhE CHL00015
NADH dehydrogenase subunit 4L
 1-96 2.88e-03

NADH dehydrogenase subunit 4L


Pssm-ID: 176958  Cd Length: 101  Bit Score: 34.21  E-value: 2.88e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 927372389   1 MPLLHLSFYSAFALSS--LGLAFHRtHLISALLCLESMMLSMYIALSTWP--IENQTPSLTLTPIFMLTFAACEAGTGLA 76
Cdd:CHL00015   1 MMLEHVLILSAYLFSIgiYGLITSR-NMVRALMCLELILNAVNINFVTFSdfFDSRQLKGDIFSIFVIAIAAAEAAIGLA 79

                         90       100
                 ....*....|....*....|
gi 927372389  77 MLVASTRTHGSDHLQNLNLL 96
Cdd:CHL00015  80 IVSSIYRNRKSTRINQSNLL 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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