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Conserved domains on  [gi|919491474|gb|ALA20843|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Zosterops minutus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-94 3.83e-53

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 161.24  E-value: 3.83e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLG 80
Cdd:MTH00136  23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLG 102

                         90
                 ....*....|....
gi 919491474  81 LMYEWAQGGLEWAE 94
Cdd:MTH00136 103 LIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-94 3.83e-53

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 161.24  E-value: 3.83e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLG 80
Cdd:MTH00136  23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLG 102

                         90
                 ....*....|....
gi 919491474  81 LMYEWAQGGLEWAE 94
Cdd:MTH00136 103 LIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
1-91 2.60e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.18  E-value: 2.60e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTL 79
Cdd:pfam00507  5 RLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAILLV 82

                         90
                 ....*....|..
gi 919491474  80 GLMYEWAQGGLE 91
Cdd:pfam00507 83 GLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-92 1.86e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.94  E-value: 1.86e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTL 79
Cdd:COG0838   27 RLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFrELGWFGLIEMLVFIAILLV 104

                         90
                 ....*....|...
gi 919491474  80 GLMYEWAQGGLEW 92
Cdd:COG0838  105 GLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-94 3.83e-53

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 161.24  E-value: 3.83e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLG 80
Cdd:MTH00136  23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLG 102

                         90
                 ....*....|....
gi 919491474  81 LMYEWAQGGLEWAE 94
Cdd:MTH00136 103 LIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-94 8.04e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 155.54  E-value: 8.04e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLG 80
Cdd:MTH00069  21 FWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLFWSTLILILLTLG 100

                         90
                 ....*....|....
gi 919491474  81 LMYEWAQGGLEWAE 94
Cdd:MTH00069 101 LIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-93 4.98e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 150.80  E-value: 4.98e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLG 80
Cdd:MTH00113  22 FWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLLTLG 101

                         90
                 ....*....|...
gi 919491474  81 LMYEWAQGGLEWA 93
Cdd:MTH00113 102 LIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-94 1.63e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 136.99  E-value: 1.63e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLG 80
Cdd:MTH00106  22 FWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALS 101

                         90
                 ....*....|....
gi 919491474  81 LMYEWAQGGLEWAE 94
Cdd:MTH00106 102 LAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 7-94 6.27e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 120.47  E-value: 6.27e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   7 NPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYEWA 86
Cdd:MTH00042  29 SPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWV 108


                 ....*...
gi 919491474  87 QGGLEWAE 94
Cdd:MTH00042 109 NGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-92 8.03e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 112.30  E-value: 8.03e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPttTLIWTSTLILLLTLG 80
Cdd:MTH00203  23 FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL--SLLLAFLFLILLTLG 100

                         90
                 ....*....|..
gi 919491474  81 LMYEWAQGGLEW 92
Cdd:MTH00203 101 LIYEWLQGGLEW 112
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 9-92 2.02e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 96.00  E-value: 2.02e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   9 DAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYEWAQG 88
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 919491474  89 GLEW 92
Cdd:MTH00161 110 ALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
1-91 2.60e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.18  E-value: 2.60e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTL 79
Cdd:pfam00507  5 RLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAILLV 82

                         90
                 ....*....|..
gi 919491474  80 GLMYEWAQGGLE 91
Cdd:pfam00507 83 GLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 9-94 8.10e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 89.53  E-value: 8.10e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   9 DAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYEWAQG 88
Cdd:MTH00148  32 DREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEG 111


                 ....*.
gi 919491474  89 GLEWAE 94
Cdd:MTH00148 112 SLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 4-94 2.24e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.81  E-value: 2.24e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   4 AQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMY 83
Cdd:MTH00202  27 FRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIH 106

                         90
                 ....*....|.
gi 919491474  84 EWAQGGLEWAE 94
Cdd:MTH00202 107 EWKEGSLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 8-92 2.64e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 83.22  E-value: 2.64e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   8 PDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIWTSTLILLLTLG-LMYEWA 86
Cdd:MTH00055  34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVMYLFLIILTIgLIYEWV 111


                 ....*.
gi 919491474  87 QGGLEW 92
Cdd:MTH00055 112 KGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-92 1.86e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.94  E-value: 1.86e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTL 79
Cdd:COG0838   27 RLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFrELGWFGLIEMLVFIAILLV 104

                         90
                 ....*....|...
gi 919491474  80 GLMYEWAQGGLEW 92
Cdd:COG0838  105 GLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 4-93 5.89e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.90  E-value: 5.89e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   4 AQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMY 83
Cdd:MTH00012  27 ARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIH 106

                         90
                 ....*....|
gi 919491474  84 EWAQGGLEWA 93
Cdd:MTH00012 107 EWREGSLDWS 116
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-93 7.24e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 77.21  E-value: 7.24e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   7 NPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIWTSTLILLLTLG-LMYEW 85
Cdd:PRK06602  36 APDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVEAMIFILVLLVgLVYLW 113


                 ....*...
gi 919491474  86 AQGGLEWA 93
Cdd:PRK06602 114 RKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-92 6.93e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 74.33  E-value: 6.93e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   8 PDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIwTSTLILLLTLGLMYEWAQ 87
Cdd:MTH00018  29 PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWT-MVGFLFILTLGLIYEWIK 107


                 ....*
gi 919491474  88 GGLEW 92
Cdd:MTH00018 108 GGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-92 5.09e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.96  E-value: 5.09e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   3 IAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIWTSTLILLLTLGLM 82
Cdd:MTH00030  34 IGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFWIVYTFLIVLAIGL 111

                         90
                 ....*....|.
gi 919491474  83 -YEWAQGGLEW 92
Cdd:MTH00030 112 aYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 12-92 1.84e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.14  E-value: 1.84e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474  12 KLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWATQLQN-PTTTLIWTSTLILLLTLGLMYEWAQG 88
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAYVWRRG 114


                 ....
gi 919491474  89 GLEW 92
Cdd:PRK07928 115 GLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 2-92 4.70e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.22  E-value: 4.70e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   2 WIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQN-PTTTLIWTSTLILLLTLG 80
Cdd:CHL00022  30 LLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVlGVSAFIEALIFVLILIVG 107

                         90
                 ....*....|..
gi 919491474  81 LMYEWAQGGLEW 92
Cdd:CHL00022 108 LVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-52 8.70e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 46.04  E-value: 8.70e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 919491474   1 FWIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLL 52
Cdd:MTH00092  23 FFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-92 4.49e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 44.35  E-value: 4.49e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491474   2 WIAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWATQLQN-PTTTLIWTSTLILLLTLG 80
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKlGLFALIEMLIFVVMLLVG 109

                         90
                 ....*....|..
gi 919491474  81 LMYEWAQGGLEW 92
Cdd:PRK07756 110 LAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-57 2.75e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 42.35  E-value: 2.75e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 919491474   3 IAQMNPDAEKLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWA 57
Cdd:PRK08489  38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 14-55 8.15e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 41.04  E-value: 8.15e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 919491474  14 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLP 55
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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