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Conserved domains on  [gi|918020923|ref|YP_009163331|]
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NADH-plastoquinone oxidoreductase subunit 1 (plastid) [Trillium tschonoskii]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10000030)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
 1-360 0e+00

NADH dehydrogenase subunit 1


:

Pssm-ID: 214341  Cd Length: 363  Bit Score: 685.14  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923   1 MIIGATEVQAINSFSKSESLKEIYGFGWLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGT 80
Cdd:CHL00032   1 MIIDTTEVQAINSFSRLESLKEVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  81 KLLFKEDLLPSRGDIRLFSVGPSIAVISILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSG 160
Cdd:CHL00032  81 KLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 161 GLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEEL 240
Cdd:CHL00032 161 GLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 241 VAGYQTEYSGIKYGLFYVASYLNLLVSSLFVTVLYLGGWNFSIPYISIPEPIGTN---GVLGMTIGIFSTLAKAYLFLFI 317
Cdd:CHL00032 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEINktgGVFGTTIGIFITLAKTYLFLFI 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 918020923 318 SITTRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSFQLVSL 360
Cdd:CHL00032 321 SITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLLSL 363
 
Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
 1-360 0e+00

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 685.14  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923   1 MIIGATEVQAINSFSKSESLKEIYGFGWLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGT 80
Cdd:CHL00032   1 MIIDTTEVQAINSFSRLESLKEVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  81 KLLFKEDLLPSRGDIRLFSVGPSIAVISILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSG 160
Cdd:CHL00032  81 KLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 161 GLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEEL 240
Cdd:CHL00032 161 GLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 241 VAGYQTEYSGIKYGLFYVASYLNLLVSSLFVTVLYLGGWNFSIPYISIPEPIGTN---GVLGMTIGIFSTLAKAYLFLFI 317
Cdd:CHL00032 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEINktgGVFGTTIGIFITLAKTYLFLFI 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 918020923 318 SITTRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSFQLVSL 360
Cdd:CHL00032 321 SITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLLSL 363
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 28-352 4.33e-125

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 362.53  E-value: 4.33e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  28 WLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVI 107
Cdd:COG1005   10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 108 SILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSN 187
Cdd:COG1005   90 PALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 188 SSSTVDIVEAQSKygfWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVS 267
Cdd:COG1005  170 SLNLSEIVEAQAG---GLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 268 SLFVTVLYLGGWNFsiPYISIPepigtngvLGMTIGIFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLG 347
Cdd:COG1005  247 SALATTLFLGGWLG--PFPILP--------LGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316


                 ....*
gi 918020923 348 NLLLT 352
Cdd:COG1005  317 NLVLT 321
NADHdh pfam00146
NADH dehydrogenase;
33-352 4.64e-115

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 335.98  E-value: 4.64e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923   33 VLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLS 112
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  113 YLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTV 192
Cdd:pfam00146  82 FAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  193 DIVEAQSkygfWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFVT 272
Cdd:pfam00146 162 EIVEAQA----GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  273 VLYLGGWNFSIPYisipepigtngvlgmtIGIFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLGNLLLT 352
Cdd:pfam00146 238 TLFLGGWLGPFPL----------------PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
 
Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
 1-360 0e+00

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 685.14  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923   1 MIIGATEVQAINSFSKSESLKEIYGFGWLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGT 80
Cdd:CHL00032   1 MIIDTTEVQAINSFSRLESLKEVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  81 KLLFKEDLLPSRGDIRLFSVGPSIAVISILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSG 160
Cdd:CHL00032  81 KLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 161 GLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEEL 240
Cdd:CHL00032 161 GLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 241 VAGYQTEYSGIKYGLFYVASYLNLLVSSLFVTVLYLGGWNFSIPYISIPEPIGTN---GVLGMTIGIFSTLAKAYLFLFI 317
Cdd:CHL00032 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEINktgGVFGTTIGIFITLAKTYLFLFI 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 918020923 318 SITTRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSFQLVSL 360
Cdd:CHL00032 321 SITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLLSL 363
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 28-352 4.33e-125

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 362.53  E-value: 4.33e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  28 WLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVI 107
Cdd:COG1005   10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 108 SILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSN 187
Cdd:COG1005   90 PALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 188 SSSTVDIVEAQSKygfWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVS 267
Cdd:COG1005  170 SLNLSEIVEAQAG---GLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 268 SLFVTVLYLGGWNFsiPYISIPepigtngvLGMTIGIFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLG 347
Cdd:COG1005  247 SALATTLFLGGWLG--PFPILP--------LGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316


                 ....*
gi 918020923 348 NLLLT 352
Cdd:COG1005  317 NLVLT 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
28-352 2.67e-120

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 350.26  E-value: 2.67e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  28 WLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVI 107
Cdd:PRK06076  11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 108 SILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSN 187
Cdd:PRK06076  91 PAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAG 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 188 SSSTVDIVEAQSkygfWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVS 267
Cdd:PRK06076 171 SLNLSDIVEAQF----LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 268 SLFVTVLYLGGWNFSIPyisipepigtngVLGMTIGIFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLG 347
Cdd:PRK06076 247 SALITTLFLGGWLPPFP------------LGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLV 314


                 ....*
gi 918020923 348 NLLLT 352
Cdd:PRK06076 315 NLLLT 319
NADHdh pfam00146
NADH dehydrogenase;
33-352 4.64e-115

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 335.98  E-value: 4.64e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923   33 VLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLS 112
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  113 YLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTV 192
Cdd:pfam00146  82 FAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  193 DIVEAQSkygfWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFVT 272
Cdd:pfam00146 162 EIVEAQA----GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  273 VLYLGGWNFSIPYisipepigtngvlgmtIGIFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLGNLLLT 352
Cdd:pfam00146 238 TLFLGGWLGPFPL----------------PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 23-354 8.33e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 185.32  E-value: 8.33e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  23 IYGFGWLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGP 102
Cdd:MTH00216   2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 103 SIAVISILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSI 182
Cdd:MTH00216  82 VLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 183 SLLSNSSSTVDIVEAQSKYGFWGWNLWrqPIGfIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYL 262
Cdd:MTH00216 162 LLCVGSLSITEIVLAQNNGIWFFFPLF--PVA-IMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYA 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 263 NLLVSSLFVTVLYLGGWNFSIPYISipepiGTNGVLGMtigifstlaKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLL 342
Cdd:MTH00216 239 HIILMSCLTTILFLGGWLSPIKYFK-----GGAGWFGL---------KVVFIIFLFIWVRASFPRIRYDQLMALLWKSYL 304

                        330
                 ....*....|..
gi 918020923 343 PISLGNLLLTTS 354
Cdd:MTH00216 305 PLSLGVVIFVAS 316
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 33-354 2.27e-55

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 184.16  E-value: 2.27e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  33 VLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLS 112
Cdd:MTH00054   8 ILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 113 YLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTV 192
Cdd:MTH00054  88 WGVIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLT 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 193 DIVEAQSKYgfwgWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFVT 272
Cdd:MTH00054 168 EIVLAQKNI----WFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGV 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 273 VLYLGGWnfsIPYISIPEPIGTNGVLGMTIGIFstlakayLFLFISIttRWTLPRMRMDQLLNLGWKFLLPISLGNLLLT 352
Cdd:MTH00054 244 ILFLGGW---LVISGPTSYFSNFVWFGIKIALI-------IFLFIWI--RASYPRIRYDQLMALLWKSYLPLSLAFVVLV 311


                 ..
gi 918020923 353 TS 354
Cdd:MTH00054 312 SG 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 23-352 6.55e-55

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 183.68  E-value: 6.55e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  23 IYGFGWLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGP 102
Cdd:MTH00029   3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 103 SIAVISILLSYLVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSI 182
Cdd:MTH00029  83 IISFTLAILAWAIVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 183 SLLSNSSSTVDIVEAQSKYgfwgWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYL 262
Cdd:MTH00029 163 ILCVGSLNISEIVISQRSV----WLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYS 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 263 NLLVSSLFVTVLYLGGWnfSIPYISIPEPIGTNGVLGMTIGIFSTL---AKAYLFLFISITTRWTLPRMRMDQLLNLGWK 339
Cdd:MTH00029 239 NIILMSCMMTIFFLGGW--LSPLDGIPTPPEAFSIFEQIASSKSSFwffTKSSIFILFFIWSRASFPRIRYDQLMKLLWK 316

                        330
                 ....*....|...
gi 918020923 340 FLLPISLGNLLLT 352
Cdd:MTH00029 317 TYLPLSLGLVILT 329
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 29-360 6.60e-52

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 175.16  E-value: 6.60e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  29 LFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVIS 108
Cdd:MTH00040   6 FLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 109 ILLSYLVIPFGYRLVLADLSigVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNS 188
Cdd:MTH00040  86 ALLLWSLIPVPTPTLNVNLS--LLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 189 SSTVDIVEAQSkygfWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSS 268
Cdd:MTH00040 164 FSLSSISNSQN----GSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMN 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 269 LFVTVLYLGGwnfsipyisiPEPIGTNGVLGMTIGIFSTLAKAYLFLFIsittRWTLPRMRMDQLLNLGWKFLLPISLGn 348
Cdd:MTH00040 240 LLSVILFLGG----------GSPFNEIFPINIIIVGIKTTFLVFLFLWV----RASYPRFRYDQLMFLTWKNYLPLSIG- 304

                        330
                 ....*....|..
gi 918020923 349 LLLTTSFQLVSL 360
Cdd:MTH00040 305 LLIFYLLLLSLL 316
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 38-351 1.53e-51

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 173.52  E-value: 1.53e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  38 LGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLSYLVIP 117
Cdd:MTH00143  12 LCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYP 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 118 FGYRLVLadLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIvea 197
Cdd:MTH00143  92 SYFSSSY--FGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEI--- 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 198 qSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFVTVLYLG 277
Cdd:MTH00143 167 -SESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFG 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 918020923 278 GWNFSipyisipePIGTNGVLGMTIGIFstlakAYLFLFIsittRWTLPRMRMDQLLNLGWKFLLPISLGNLLL 351
Cdd:MTH00143 246 GSSVL--------FLLGGVVFMFKVLFF-----AFLFIWV----RASYPRFRYDLLMMLCWKSFLPFSLSILVL 302
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 34-358 1.01e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 166.24  E-value: 1.01e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  34 LTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLSY 113
Cdd:MTH00218   9 LLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLW 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 114 LVIPFGYRLVlaDLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNS--SST 191
Cdd:MTH00218  89 MPLPLPFSLI--NLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGfsLEG 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 192 VDIVEAQSKYGFWGWNLwrqpigFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFV 271
Cdd:MTH00218 167 FNLTQETIWLLIPEWPL------ALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 272 TVLYLGGWNFSipyisipepigtngvlgmtigiFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLGNLLL 351
Cdd:MTH00218 241 VILFLGTSLTT----------------------INLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLL 298


                 ....*..
gi 918020923 352 TTSFQLV 358
Cdd:MTH00218 299 HTSLPLS 305
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 29-357 1.77e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 165.59  E-value: 1.77e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  29 LFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVIS 108
Cdd:MTH00225   3 FLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLIL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 109 ILLSYLVIPFGYRLVlaDLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNS 188
Cdd:MTH00225  83 SLILWSLYPSMFSIY--SFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 189 SSTVDIVEAQSKYgfwgWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSS 268
Cdd:MTH00225 161 YNLFDFSYNQKYF----WFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMS 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 269 LFVTVLYLGGWNFSIPyisipepigtngvlgmtigiFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLGN 348
Cdd:MTH00225 237 MLTSILFFGGFFVTID--------------------LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAY 296


                 ....*....
gi 918020923 349 LLLTTSFQL 357
Cdd:MTH00225 297 LFMVLIILM 305
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 28-355 7.49e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 163.79  E-value: 7.49e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  28 WLFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVI 107
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 108 SILLSYLVIPFGYRLVlaDLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSN 187
Cdd:MTH00193  83 LSLLIWLIYPYLFNLI--SFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 188 SSSTVDIVEAQSKygfwGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVS 267
Cdd:MTH00193 161 SFNLLDFMNYQKY----IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFM 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 268 SLFVTVLYLGGWNFSIpyisipepigtngvlgmtIGIFSTLakayLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLG 347
Cdd:MTH00193 237 SMLFVLMFLGGDLLSL------------------LFYLKLL----FISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLN 294


                 ....*...
gi 918020923 348 NLLLTTSF 355
Cdd:MTH00193 295 YLLFFFGL 302
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 34-360 2.32e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 160.56  E-value: 2.32e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  34 LTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLsy 113
Cdd:MTH00071  12 LLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALI-- 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 114 LVIPFGYRLVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSisllsnsssTVD 193
Cdd:MTH00071  90 IWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLC---------LIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 194 IVEAQSKYGFwgwNLWRQPIGFIV--------FIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLL 265
Cdd:MTH00071 161 LTGGFSLMNF---NTTQEFMWLIIpawpmaamWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIL 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 266 VSSLFVTVLYLGgwnfsiPYISIPEPIGTNGVLGMTIGIFSTlakayLFLFIsittRWTLPRMRMDQLLNLGWKFLLPIS 345
Cdd:MTH00071 238 MMNTLSTILFLG------STYNHLQPELSTMNLMIKASILSM-----LFLWV----RASYPRFRYDQLMHLVWKNFLPIT 302

                        330
                 ....*....|....*
gi 918020923 346 LGNLLLTTSFQLVSL 360
Cdd:MTH00071 303 LAMTIFHISLPISTL 317
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 31-355 5.60e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 159.68  E-value: 5.60e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  31 VPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISIL 110
Cdd:MTH00111   9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 111 LSYLVIPFGYrlVLADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLS--NS 188
Cdd:MTH00111  89 TIWTPLPMPF--PLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSggYT 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 189 SSTVDIVEAQSKYGFWGWNLwrqpigFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSS 268
Cdd:MTH00111 167 LQTLATTQEPLWLIFSSWPL------AMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 269 LFVTVLYLGgwnfsipyisiPEPIGTNGVLGMTIGIFSTLAKAYLFLFIsittRWTLPRMRMDQLLNLGWKFLLPISLGN 348
Cdd:MTH00111 241 TLTTILFLN-----------PSTLNLPPELFTINLMTKTLLLTSGFLWI----RASYPRFRYDQLMHLLWKQFLPLTLAL 305


                 ....*..
gi 918020923 349 LLLTTSF 355
Cdd:MTH00111 306 CLWHTSM 312
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 50-360 9.30e-46

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 158.79  E-value: 9.30e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  50 LEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLSYLVIPFGYRLVLadLSI 129
Cdd:MTH00010  26 LERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPSFF--LKF 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 130 GVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIVEAQSKygfwgWNLW 209
Cdd:MTH00010 104 SILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-----WILL 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 210 RQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFVTVLYLGgwnfSIPYISIP 289
Cdd:MTH00010 179 MIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTS----FIPSIFIS 254

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 918020923 290 EPigtngvlgMTIGIFSTLAkaylFLFISIttRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSFQLVSL 360
Cdd:MTH00010 255 DL--------MLILKTVFLA----FLFIWI--RATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 29-354 5.72e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 156.71  E-value: 5.72e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  29 LFVPVLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVIS 108
Cdd:MTH00104   2 FMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 109 ILLSYLVIPFGYRLVlaDLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNS 188
Cdd:MTH00104  82 ALTMWIPLPMPYPLI--NMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGS 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 189 SSTVDIVEAQSkygfwgwNLW----RQPIGFIVFIiSSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNL 264
Cdd:MTH00104 160 FTLSTLITTQE-------HLWlifpSWPLAMMWFI-STLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANI 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 265 LVSSLFVTVLYLGGWNfsipYISIPEPIGTNGVLgmtigifSTLAKAYLFLFIsittRWTLPRMRMDQLLNLGWKFLLPI 344
Cdd:MTH00104 232 IMMNALTTILFLGAFH----NPYMPELYTTNFTI-------KTLLLTILFLWI----RASYPRFRYDQLMHLLWKNFLPL 296

                        330
                 ....*....|
gi 918020923 345 SLGNLLLTTS 354
Cdd:MTH00104 297 TLALCMWHIS 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 34-351 3.71e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 151.82  E-value: 3.71e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  34 LTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLSY 113
Cdd:MTH00195   9 LIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILW 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 114 LVIPFGYRLVlaDLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTVD 193
Cdd:MTH00195  89 VPIPSPFGFS--SINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTI 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 194 IVEAQSKygFWGWNLWRQPIgfIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFVTV 273
Cdd:MTH00195 167 MVISQGF--SWVILLCPPIS--FMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 918020923 274 LYLGGWnfsipyisipepigtngvlgmtiGIFSTLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPISLGNLLL 351
Cdd:MTH00195 243 LFLGGG-----------------------GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 34-346 2.02e-42

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 150.14  E-value: 2.02e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  34 LTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLSY 113
Cdd:MTH00134  13 LAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLW 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 114 LVIPFGYRLvlADLSIGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLS--NSSST 191
Cdd:MTH00134  93 APMPMPYPV--TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTggFTLQT 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 192 VDIVEAQSKYGFWGWNLwrqpigFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFV 271
Cdd:MTH00134 171 FNTAQESIWLLLPAWPL------AAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 918020923 272 TVLYLGGWNFsipyISIPEPIGTNgvLGMTIGIFSTlakayLFLFIsittRWTLPRMRMDQLLNLGWKFLLPISL 346
Cdd:MTH00134 245 AILFLGASHI----PTLPELTTIN--LMTKAALLSV-----VFLWV----RASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 33-346 1.66e-32

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 122.70  E-value: 1.66e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  33 VLTLILGITVGVLVIVWLEREISAAIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLS 112
Cdd:MTH00090   2 LLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 113 YLVIPFGYRLVLADLS-------IGVSLWIsissiapigLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSisll 185
Cdd:MTH00090  82 WFVLPYFFDFLSFEYSllfflclIGFSVYT---------TLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLS---- 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 186 snssstvdIVEAQSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLL 265
Cdd:MTH00090 149 --------IMLHNNSFSFVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLI 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 266 VSSLFVTVLYLggwNFSIPYIsipepigtngvlgmtigifstlakaYLFLFISITTRWTLPRMRMDQLLNLGWKFLLPIS 345
Cdd:MTH00090 221 FFSVLTSVLFF---KFSFLML-------------------------FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLS 272


                 .
gi 918020923 346 L 346
Cdd:MTH00090 273 L 273
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
29-351 3.36e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 114.51  E-value: 3.36e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  29 LFVPVLTLILGITVGVLVIVWLeREISAAIQQRIGPeyagplGILQALADGTKLLFKEDLLPsRGDIRLFSVGPSIAVIS 108
Cdd:COG0650    4 ILLALLQLLLALLLAPLLLGII-RKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVALAA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 109 ILLSYLVIPFGYRLV----LADLSIGVSLWisisSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISL 184
Cdd:COG0650   76 MLLAALLVPVLTTGPplsfSGDLIVLVYLL----ALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALAL 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 185 LSNSSSTVDIVEAQSKYGFWGWNLWRqPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNL 264
Cdd:COG0650  152 LAGSTSLSDIVAYQAAHGPLLLSPSL-LLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKL 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 265 LV-SSLFVTVLYlggwnfsipyisipePIGTNGVLGMTIGIFstLAKAYLFLFISITTRWTLPRMRMDQLLNLGWKFLLP 343
Cdd:COG0650  231 FVlLSLFVNLFL---------------PWGIALTLLLALLLF--LLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLL 293


                 ....*...
gi 918020923 344 ISLGNLLL 351
Cdd:COG0650  294 ALLALLLA 301
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 51-346 1.65e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 104.24  E-value: 1.65e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923  51 EREISAAIQQRIGPEYAGPLGILQALADGTKLL--FKEDLLPSRGDIRLFSVgpsIAVISILLSYLVIPFGYRLVLADlS 128
Cdd:MTH00058  25 ERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVvkFKVYGFQSRSWFSLFGV---FLLVLLVVFYCFIYGSYYSGSYS-S 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 129 IGVSLWISISSIAPIGLLISGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIveaqskYGFWGWNL 208
Cdd:MTH00058 101 LSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF------YYSGWLSV 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 918020923 209 WRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYVASYLNLLVSSLFVTVLYLGGwnfsipyisi 288
Cdd:MTH00058 175 LLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGG---------- 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 918020923 289 pepigtngvlgmtiGIFSTLAKAYLFLFisITTRWTLPRMRMDQLLNLGWKFLLPISL 346
Cdd:MTH00058 245 --------------GFVSIMLLFHLLFF--MWARATLPRVRYDYFVNFFWEYCLVLLI 286
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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