NCBI Conserved Domain Search

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

1085-1263

1.42e-11

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442298 [Multi-domain] Cd Length: 485 Bit Score: 69.30 E-value: 1.42e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESK-KKEAMKRAEDARRIEEARRAEDARRIEEARRAedaRRVEIARRVEDarrieisRRAEDAKRIE 1163
Cdd:COG3064    11 EAAAQERLEQAEAEKRaAAEAEQKAKEEAEEERLAELEAKRQAEEEARE---AKAEAEQRAAE-------LAAEAAKKLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1164 AARRAIEV--RRAELRKAEDARRIEAARRYENERRIEEARRYEDEKR---IEAVKRAEEVRKDEEEAKRAEKERNNEEIR 1238
Cdd:COG3064    81 EAEKAAAEaeKKAAAEKAKAAKEAEAAAAAEKAAAAAEKEKAEEAKRkaeEEAKRKAEEERKAAEAEAAAKAEAEAARAA 160

                         170       180
                  ....*....|....*....|....*
gi 914546577 1239 KFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:COG3064   161 AAAAAAAAAAAARAAAGAAAALVAA 185

tolA_full

TIGR02794

TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ...

1085-1264

3.53e-11

TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]

Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 67.18 E-value: 3.53e-11

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1085 EEARKTETGRIEEESKKKEAMK--RAEDARRIEEARraEDARRIEEARRAEDARRVEIARRVEDARRIEIsRRAEDAKRI 1162
Cdd:TIGR02794   60 KPAAKKEQERQKKLEQQAEEAEkqRAAEQARQKELE--QRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAK-QAAEAKAKA 136

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1163 EAARRAIEVRRAElRKAEDARRIEAARryENERRIEEARRyedeKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEE 1242
Cdd:TIGR02794  137 EAEAERKAKEEAA-KQAEEEAKAKAAA--EAKKKAEEAKK----KAEAEAKAKAEAEAKAKAEEAKAKAEAAKAKAAAEA 209

                          170       180
                   ....*....|....*....|..
gi 914546577  1243 ARMAHfARRQAAIKAEEKRKAD 1264
Cdd:TIGR02794  210 AAKAE-AEAAAAAAAEAERKAD 230

growth_prot_Scy

polarized growth protein Scy;

1083-1218

1.41e-06

polarized growth protein Scy;

Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 53.68 E-value: 1.41e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1083 LFEEARKT-ETGRIEEESKKKEAMKRAEDARriEEARRAEDARRiEEARRAEDARRVEIARRVE---------------- 1145
Cdd:NF041483  518 LRRQAEETlERTRAEAERLRAEAEEQAEEVR--AAAERAARELR-EETERAIAARQAEAAEELTrlhteaeerltaaeea 594

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1146 --DAR----RI------EISR-RAEDAKRIEAARRAIEVRRAELRK--AEDAR-------------RIEAARryENERRI 1197
Cdd:NF041483  595 laDARaeaeRIrreaaeETERlRTEAAERIRTLQAQAEQEAERLRTeaAADASaaraegenvavrlRSEAAA--EAERLK 672

                         170       180
                  ....*....|....*....|.
gi 914546577 1198 EEARRYEDEKRIEAVKRAEEV 1218
Cdd:NF041483  673 SEAQESADRVRAEAAAAAERV 693

growth_prot_Scy

polarized growth protein Scy;

1085-1264

6.70e-04

polarized growth protein Scy;

Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 44.82 E-value: 6.70e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEAR----------RAEDARRV---------------- 1138
Cdd:NF041483  233 EATDHAEQLRSSTAAESDQARRQAAELSRAAEQRMQEAEEALREARaeaekvvaeaKEAAAKQLasaesaneqrtrtake 312

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1139 EIARRV-----------EDARRIEISRRAEDAKRI-EAARRAIEV-------------RRAE--LRKA-EDARRIEAARR 1190
Cdd:NF041483  313 EIARLVgeatkeaealkAEAEQALADARAEAEKLVaEAAEKARTVaaedtaaqlakaaRTAEevLTKAsEDAKATTRAAA 392

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1191 YENERRIEEARRYEDEKRIEAVKRAEEVR---KDEEEAKRAEKERNNEEIRKF-------------EEARMAHFARRQA- 1253
Cdd:NF041483  393 EEAERIRREAEAEADRLRGEAADQAEQLKgaaKDDTKEYRAKTVELQEEARRLrgeaeqlraeavaEGERIRGEARREAv 472

                         250       260
                  ....*....|....*....|
gi 914546577 1254 ------AIKAEE---KRKAD 1264
Cdd:NF041483  473 qqieeaARTAEElltKAKAD 492

growth_prot_Scy

polarized growth protein Scy;

1096-1219

1.30e-03

polarized growth protein Scy;

Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 44.05 E-value: 1.30e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1096 EEESKKKEAMKRAeDARRIEEARRAEdaRRIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRRAE 1175
Cdd:NF041483  667 EAERLKSEAQESA-DRVRAEAAAAAE--RVGTEAAEALAAAQEEAARRRREAEETLGSARAEADQERERAREQSEELLAS 743

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 914546577 1176 LRKAEDARRIEAARRYenerriEEARRYEDEKRIEAVKRAEEVR 1219
Cdd:NF041483  744 ARKRVEEAQAEAQRLV------EEADRRATELVSAAEQTAQQVR 781

ATP-synt_Fo_b

cd06503

F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex ...

1082-1190

2.00e-03

F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens.

Pssm-ID: 349951 [Multi-domain] Cd Length: 132 Bit Score: 40.50 E-value: 2.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1082 GLFEEARKTETGRIEE-ESKKKEAMKRAEDAR-RIEEARrAEDARRIEEARRAEDARRVEIarrVEDARRiEISRRAEDA 1159
Cdd:cd06503    26 KALDEREEKIAESLEEaEKAKEEAEELLAEYEeKLAEAR-AEAQEIIEEARKEAEKIKEEI---LAEAKE-EAERILEQA 100

                          90       100       110
                  ....*....|....*....|....*....|....
gi 914546577 1160 KR-IEAARRAIevrRAELRK--AEDArrIEAARR 1190
Cdd:cd06503   101 KAeIEQEKEKA---LAELRKevADLA--VEAAEK 129

AMA-1

smart00815

Apical membrane antigen 1; Apical membrane antigen 1 (AMA-1) is a Plasmodium asexual ...

803-906

3.00e-03

Apical membrane antigen 1; Apical membrane antigen 1 (AMA-1) is a Plasmodium asexual blood-stage antigen. It has been suggested that positive selection operates on the AMA-1 gene in regions coding for antigenic sites.

Pssm-ID: 214831 [Multi-domain] Cd Length: 239 Bit Score: 41.66 E-value: 3.00e-03

                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577    803 NLFDCSIYSYCLGPcleNSFGNKCFRnLPAYYNHLTNECVILGTHEQERTNS--CRRTKEEKKKPNCQILRKTTDSKDWT 880
Cdd:smart00815  101 DLSLCAEHASNTVP---GNNKNSKYR-YPFVYDSDDKLCYILYVAAQENQGPryCSNDEEGTSSLFCFKPDKSKEDHHLI 176

                            90       100
                    ....*....|....*....|....*.
gi 914546577    881 YVSSFIRPDYETKCpPRYPLKSKVFG 906
Cdd:smart00815  177 YGSANVGDDWEEVC-PNKPLRNAKFG 201

Name

Accession

Description

Interval

E-value

PTZ00121

MAEBL; Provisional

1-2054

0e+00

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 2550.47 E-value: 0e+00

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577    1 MGVLKHFFFLLFLYVNNTSAINNPQEEFMDRFDINKNHVNIKWSNSGIHGKGKFKYEIEERDVLS-EGNESEKSTICPNH 79
Cdd:PTZ00121    1 MGLLKFFAFLAFLCICKAKAIANPQEAFMDRFDIAKNHINIKWSNNGIHGEGDFKYDIDDGDNLDfEGNEEEKSGICPDH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577   80 VKEGTYKLGCPDYGKTFLMGFEDNKYSEEFLNEISFGFLNKKYKLPIEIPLNKSGLSMYQGLFKRCPYNKKHYSMIKNEN 159
Cdd:PTZ00121   81 GAEEMYKGGCPDYGKTFLMDFEDDEYNEEFLDEISFGFLNKKLKLPIEIPLEKSGLAMYQGLFKRCPLDEKHSSLIKKEH 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  160 EYDMCFRKFYNNSNISTRIYKRGKQNRKYIYFSSHGLGGRLGANIEEPLHKYKNDEHYVTKKMRYPEKIKNLFDCSIYSH 239
Cdd:PTZ00121  161 EYDMCFEKFYNNMEISDRIKKRGKQNRKYIHFGSHGLGGRFGANIDEPLHDYKNDEHHVTKKMGFPEKIKNLFDCSIYSH 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  240 CIGPCLYKDFNNSCFLNLPILFNHQTKECVIIGTHEEKRIHNCQSGSTDQNIQRCFLPVKKEKGNQWTYASSFIRTDYMT 319
Cdd:PTZ00121  241 CIGPCFGKDFNNECFLNLPILFNHQTKECVIIGTHEAKRIHNCLSGNSDQGFERCFLPMKKEAGKEWTYASSFIRPDYET 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  320 KCPPRFPLNHTMFGYFNYSTGKCETYYMNHEKR-TLSFSKCIETLFNNIKKQDDVNNSSFLWGVWTIENNANEKTNLASM 398
Cdd:PTZ00121  321 KCPPRFPLNDTMFGYFNHRTGECESAVKNHEGNyKLSFKKCIEGLFNHIEGDDDNGNNNFLWGVWFIEGNAEEKTNLASM 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  399 DNTGSCYFLKKKPTCVLKKENHFSFTILTANSFNLNQNIIYPELKNNSSKE-GSSLIHFKDPKQTNKRVLYENNKKSKRN 477
Cdd:PTZ00121  401 DDIGMCSFLKEKPNCVLKKEKHFSFTILTANSFDFAQNIIYPELEEMHDKEnGSSLIGEKAPEGREERIDLEENDGKKEE 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  478 VRTKINSVNPFTIPSTLNTNEKEEYNKNEVKNYPNNNISYIQKVHSSFVNNRFNIHSDSSFK----PIHKMIQMNIYTDN 553
Cdd:PTZ00121  481 AGSEDKEIKEFEIPQNLNKNEKEEINEHEVKGLPKENINYILKVHMRFENNHFNIHNDSIFKrkdePIHKMIELNIPSDN 560

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  554 KLYNNNNQKIKDSN------NNMNGMSVTQRSPSIGENQNGNPQQKYMERFDIPNNHIFIEWQKEGEYGNDEFKYNIISN 627
Cdd:PTZ00121  561 KLHNLGAQGIGDSNishwnsNNINGGSVSQNEGNIGEKLNGNPQQKFMERFDIPKNHIFIEWKKDGEFGEDEFKYDIISN 640

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  628 KTAGTSQSLFHNYKDKTCPNHVYEGRAHGSCPNYGKAIIVQNLLGEEYDKNFNLNFLNEIRTGYLNKYFKKDVEISYENS 707
Cdd:PTZ00121  641 KTAGTAQSLFHDNKDDTCPNHSIEGRAHGSCPNYGKAIIVENLEGEEEDKNFNLEFLNEIHTGYLGKIFIKDVEIPYDKS 720

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  708 GIAMHNNMLRSCPVHENEEKLFSVKTDYNYKMCKSKIFSNRFTMKEYDPKTRLFMYYGLYGLGGRLGANI---KRDKQKE 784
Cdd:PTZ00121  721 GIAMHHGFLASCPIDENEEKLFQRKNDYNYDMCKSKIFPNPFSMKELDPKNRLFKYYGLYGFGGRLGANIsinKRDKGKE 800

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  785 KKYEDNITLPMKNPSLIKNLFDCSIYSYCLGPCLENSFGNKCFRNLPAYYNHLTNECVILGTHEQERTNSCRRTKEEKKK 864
Cdd:PTZ00121  801 EKREDNITLPMKNPGLIKNLFDCSIYSYCLGPCLEGSFGNKCFRNLPAYYNHATNECVILGTHEQERNNNCRKEKEDKKK 880

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  865 PNCQILRKTTDSKDWTYVSSFIRPDYETKCPPRYPLKSKVFGTFDQKTGKCKSLMDKAYEVGINKFSVCLEYLFLVSPKD 944
Cdd:PTZ00121  881 PNCQIIRKTLDSKDWTYVSSFIRPDYEEKCPPRFPLKSKSFGIFDEKTGKCKSLIDEANEVGINKFGGCLEYLFINSPKD 960

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  945 LYNSGRNNYWGIWAADHSVNENNIEIANGKCYHLVVKPTCVIDKENHFSFTALTANTVDFNQSVNIRKIEELTEYGNNDD 1024
Cdd:PTZ00121  961 LYNSDRKKYWGIWAADEPVNDNNIEIANGECYHILQKPTCVIDKENHFSFTALTANTIDFNQNFNIEKIEELTEYGNNDD 1040

                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1025 VLKEKEINNEPIDNVNETKINRKSHVNSMERNKPSYKENEYDQMEKNVEDETYSEEFGLFEEARKTETGRIEEESKKKEA 1104
Cdd:PTZ00121 1041 VLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEA 1120

                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1105 MKRAEDARRIEEARRAEDARRIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRRA-ELRKAEDAR 1183
Cdd:PTZ00121 1121 KKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAeELRKAEDAR 1200

                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1184 RIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:PTZ00121 1201 KAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA 1280

                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1264 DELKKKAEEKKKAAELKKKAEEKKKADEVKKAEEKKKADELKKSEEKKKADELKKKAEEKKKADELKKKAEEKKKAENLK 1343
Cdd:PTZ00121 1281 DELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAE 1360

                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1344 KAEEKKKAENLKKAEEKKKADELKKKAEEKKKADELKKKAEEKKK-----ADELKKKAEEKKKAENLKKAEEKKKAENLK 1418
Cdd:PTZ00121 1361 AAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKkadelKKAAAAKKKADEAKKKAEEKKKADEAKKKA 1440

                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1419 KAEEKKKADELKKKAEEKKKADEVKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKAEE 1498
Cdd:PTZ00121 1441 EEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEE 1520

                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1499 KKKADELKKAEEKKKADELKKAEEKKKADELEKAEELKKAEEKKKVEQKKREEERRNMALRRAEILKQIEKKRIEEVMKL 1578
Cdd:PTZ00121 1521 AKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKL 1600

                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1579 YEEEKKMKAEQLKKEEEEKIKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKAEQLKKKEEEEKKKAEEL 1658
Cdd:PTZ00121 1601 YEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEA 1680

                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1659 KKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKVEQLKKEEEEEKKKAEQLKKEEEEKKKVQ 1738
Cdd:PTZ00121 1681 KKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIA 1760

                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1739 QLKKEEEKKAEEIRKEKEAVIEEELKKEDEKRRMEVEKKIKDTKDNFENIQEGNNKNTPYIN--KEMFDSEIKEVVITKN 1816
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINdsKEMEDSAIKEVADSKN 1840

                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1817 MQLNEADAFEKH----NSENSKSSNKNADFSKEKDLLEDDIENILETDENEKINKDDIER--SNNNMKGNNNDIIYTKLD 1890
Cdd:PTZ00121 1841 MQLEEADAFEKHkfnkNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEReiPNNNMAGKNNDIIDDKLD 1920

                        1930      1940      1950      1960      1970      1980      1990      2000
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1891 VEEYKKRDVNETREKIIKISKKNMCNNDFSSKYCDYMKDNISSGTCSNEERKSLCCSISDFCLKYFDHNSNKYYDCTKIE 1970
Cdd:PTZ00121 1921 KDEYIKRDAEETREEIIKISKKDMCINDFSSKFCDYMKDNISSGNCSDEERKELCCSISDFCLKYFDHNSNEYYDCMKEE 2000

                        2010      2020      2030      2040      2050      2060      2070      2080
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1971 FADPLYRCFKKKEFSNMVYFAGAGIVLILLFVIGSKMIIGKWFEEATFDEMDLNYDKIYTLAMINNEETQVSNPLSYSEE 2050
Cdd:PTZ00121 2001 FADKDYKCFKKKEFSNMAYFAGAGIVLILLFVIGSKAIIGKWFEEATFDEFDENYDKIYTLAMINNEEIQEAGPLDFSEE 2080


                  ....
gi 914546577 2051 NIIK 2054
Cdd:PTZ00121 2081 MIDK 2084

EBA-175_VI

pfam11556

Erythrocyte binding antigen 175; EBA-175 is involved in the formation of a tight junction, a ...

1900-1979

5.75e-37

Pssm-ID: 431933 Cd Length: 81 Bit Score: 134.54 E-value: 5.75e-37

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1900 NETREKIIKISKKNMCNNDFSSKYCDYM-KDNISSGTCSNEERKSLCCSISDFCLKYFDHNSNKYYDCTKIEFADPLYRC 1978
Cdd:pfam11556    1 SKTREEIIKLSKKNKCNNEISLKYCDYMiEDNISLGTCSREKRKNLCCSISDYCLKYFDYYSIEYYDCTKKEFDDPSYKC 80


                   .
gi 914546577  1979 F 1979
Cdd:pfam11556   81 F 81

DUF5401

pfam17380

Family of unknown function (DUF5401); This is a family of unknown function found in ...

989-1262

1.50e-12

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.

Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 72.85 E-value: 1.50e-12

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577   989 ENHFSFTALtaNTVDFNQSVNIRKIEELTEYGNNDDVLKEKEINNEPIDNVNETKINRKSHVNSMERNKPSYKENEYDQM 1068
Cdd:pfam17380  267 ENEFLNQLL--HIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAM 344

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1069 EKNVE-------------DETYSEEFGL------------FEEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEDA 1123
Cdd:pfam17380  345 ERERElerirqeerkrelERIRQEEIAMeisrmrelerlqMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ 424

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1124 RRIEEarraEDARRVEIaRRVEDARRIEISRraedaKRIEAARRAIEVRRaeLRKAEDARR---IEAARRYENERRIEEA 1200
Cdd:pfam17380  425 IRAEQ----EEARQREV-RRLEEERAREMER-----VRLEEQERQQQVER--LRQQEEERKrkkLELEKEKRDRKRAEEQ 492

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 914546577  1201 RRYEDEKRIEAVKRA--EEVRKdeeeakraekernneeiRKFEEARMAHfarRQAAIKAEEKRK 1262
Cdd:pfam17380  493 RRKILEKELEERKQAmiEEERK-----------------RKLLEKEMEE---RQKAIYEEERRR 536

TolA

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

1085-1263

1.42e-11

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442298 [Multi-domain] Cd Length: 485 Bit Score: 69.30 E-value: 1.42e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESK-KKEAMKRAEDARRIEEARRAEDARRIEEARRAedaRRVEIARRVEDarrieisRRAEDAKRIE 1163
Cdd:COG3064    11 EAAAQERLEQAEAEKRaAAEAEQKAKEEAEEERLAELEAKRQAEEEARE---AKAEAEQRAAE-------LAAEAAKKLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1164 AARRAIEV--RRAELRKAEDARRIEAARRYENERRIEEARRYEDEKR---IEAVKRAEEVRKDEEEAKRAEKERNNEEIR 1238
Cdd:COG3064    81 EAEKAAAEaeKKAAAEKAKAAKEAEAAAAAEKAAAAAEKEKAEEAKRkaeEEAKRKAEEERKAAEAEAAAKAEAEAARAA 160

                         170       180
                  ....*....|....*....|....*
gi 914546577 1239 KFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:COG3064   161 AAAAAAAAAAAARAAAGAAAALVAA 185

TolA

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

1100-1263

3.05e-11

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442298 [Multi-domain] Cd Length: 485 Bit Score: 68.14 E-value: 3.05e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1100 KKKEAMKRAEDARRiEEARRAEDARRieeaRRAEDARRVEIARRVEDARRIEISRRAEdakriEAARRAievrRAELRKA 1179
Cdd:COG3064     2 QEALEEKAAEAAAQ-ERLEQAEAEKR----AAAEAEQKAKEEAEEERLAELEAKRQAE-----EEAREA----KAEAEQR 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1180 EDARRIEAARRYEN-ERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKraekernNEEIRKFEEARMAhfARRQAAIKAE 1258
Cdd:COG3064    68 AAELAAEAAKKLAEaEKAAAEAEKKAAAEKAKAAKEAEAAAAAEKAAA-------AAEKEKAEEAKRK--AEEEAKRKAE 138


                  ....*
gi 914546577 1259 EKRKA 1263
Cdd:COG3064   139 EERKA 143

tolA_full

TIGR02794

TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ...

1085-1264

3.53e-11

Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 67.18 E-value: 3.53e-11

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1085 EEARKTETGRIEEESKKKEAMK--RAEDARRIEEARraEDARRIEEARRAEDARRVEIARRVEDARRIEIsRRAEDAKRI 1162
Cdd:TIGR02794   60 KPAAKKEQERQKKLEQQAEEAEkqRAAEQARQKELE--QRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAK-QAAEAKAKA 136

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1163 EAARRAIEVRRAElRKAEDARRIEAARryENERRIEEARRyedeKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEE 1242
Cdd:TIGR02794  137 EAEAERKAKEEAA-KQAEEEAKAKAAA--EAKKKAEEAKK----KAEAEAKAKAEAEAKAKAEEAKAKAEAAKAKAAAEA 209

                          170       180
                   ....*....|....*....|..
gi 914546577  1243 ARMAHfARRQAAIKAEEKRKAD 1264
Cdd:TIGR02794  210 AAKAE-AEAAAAAAAEAERKAD 230

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

1082-1263

7.94e-11

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 7.94e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1082 GLFEEA--------RKtetgrieEESKKK-EAMK----RAED-----ARRIEE-ARRAEDARR-------IEEARRAEDA 1135
Cdd:COG1196   159 AIIEEAagiskykeRK-------EEAERKlEATEenleRLEDilgelERQLEPlERQAEKAERyrelkeeLKELEAELLL 231

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1136 RRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRRAELRKA--EDARRIEAARRYENE-----RRIEEARRYEDEKR 1208
Cdd:COG1196   232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLEleELELELEEAQAEEYEllaelARLEQDIARLEERR 311

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 914546577 1209 IEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:COG1196   312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEA 366

PTZ00045

apical membrane antigen 1; Provisional

584-1024

9.52e-11

apical membrane antigen 1; Provisional

Pssm-ID: 240241 [Multi-domain] Cd Length: 595 Bit Score: 66.94 E-value: 9.52e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  584 ENQNGNPQQKYMERFDIPNNH---IFIEWQKEGEYGNdeFKYNIISnktagtsqslfhnykdktcpnhvyegrahGSCPN 660
Cdd:PTZ00045   89 SNRKQNPWKKFMEKFDIPRVHgsgIYVDLGEDAEVGG--KKYREPA-----------------------------GKCPV 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  661 YGKAIIVQNLlgeeydknfNLNFLNEIRTGylNKYFKKdveisyenSGIAMhnNMLRSCPVHENEEKLFSVKTDYNykmc 740
Cdd:PTZ00045  138 FGKAIILENP---------DNDFLDPVPTG--NPYPKE--------GGFAF--PATKVASNSSPTGQLISPISAEL---- 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  741 kskifsnrftMKEYdpktrlfmyyglyglggrlganikRDKQKEKKYEDNITLpmknpsliknlfdCSIYSYCLGPcleN 820
Cdd:PTZ00045  193 ----------LRER------------------------YYDNGHCKALNDLAL-------------CAEYASNFVP---A 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  821 SFGNKCFRnLPAYYNHLTNECVILGTHEQERTNS--CRRTKEEKK------KPncqilRKTTDSKDWTYVSSFIRPDYET 892
Cdd:PTZ00045  223 NNKNSKYR-YPFVYDEKKKLCYILYLSMQENQGPkyCSVDGEEGTltwacfKP-----DKSKEDNHLLYGSKNVPDDWES 296

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  893 KCPpRYPLKSKVFGTFDQktGKCKSlMDKAYEVGINKFSVCLEYLFLVSPKD--------------LYNSGRNN-----Y 953
Cdd:PTZ00045  297 KCP-RKPLRNAIFGLWVD--GNCVP-IPPVFEVEAESLEECAKIVFENSPVAsdqptqyeeltdyeKIKEGFKNnnlsmI 372

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  954 WGIWAADHSV------------NENNIEIANGKCYHLVVKPTCVIDKENHFSFTALTA-NTVDFNQSVNIRKIEELTEYG 1020
Cdd:PTZ00045  373 KSAFLPLGSFdsdnykskgvgyNWANYDKESGKCEIFDVVPTCLISDSGYYALTALSSpNEVDANFPCSIKEKIVLPRIF 452


                  ....
gi 914546577 1021 NNDD 1024
Cdd:PTZ00045  453 ISTD 456

YqiK

COG2268

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];

1070-1259

4.64e-09

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];

Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 61.04 E-value: 4.64e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1070 KNVEDET-YSEEFGLFEEARKTETGRIEE-ESKKKEAMKRAEDARRIEEARrAEDARRIEEARRAEDARrvEIARRVEDA 1147
Cdd:COG2268   177 TDLEDENnYLDALGRRKIAEIIRDARIAEaEAERETEIAIAQANREAEEAE-LEQEREIETARIAEAEA--ELAKKKAEE 253

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1148 RRieisrrAEDAKRIEAARrAIEVRRAELRKaEDARRIEAARRyenERRIEEARryedekrIEAVKRAEEVRKDeeeakr 1227
Cdd:COG2268   254 RR------EAETARAEAEA-AYEIAEANAER-EVQRQLEIAER---EREIELQE-------KEAEREEAELEAD------ 309

                         170       180       190
                  ....*....|....*....|....*....|..
gi 914546577 1228 aekernneeIRKFEEarmahfARRQAAIKAEE 1259
Cdd:COG2268   310 ---------VRKPAE------AEKQAAEAEAE 326

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

1065-1261

2.78e-08

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 2.78e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1065 YDQM--EKNVED--ETYSEEFGLFEEARKtetgRIEEESKKKEAMKRA-EDARRIEEARRaedarRIEEARRAEDARRVE 1139
Cdd:COG4913   214 REYMleEPDTFEaaDALVEHFDDLERAHE----ALEDAREQIELLEPIrELAERYAAARE-----RLAELEYLRAALRLW 284

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1140 IARRVEDARRIEISRRAEDAKRIEAARRAIEVRRAELRkaEDARRIEAARRYENERRIEEARRyEDEKRIEAVKRAEEVR 1219
Cdd:COG4913   285 FAQRRLELLEAELEELRAELARLEAELERLEARLDALR--EELDELEAQIRGNGGDRLEQLER-EIERLERELEERERRR 361

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 914546577 1220 KDEEEAKRAEKERNNEEIRKFEEARmAHFARRQAAIKAEEKR 1261
Cdd:COG4913   362 ARLEALLAALGLPLPASAEEFAALR-AEAAALLEALEEELEA 402

DUF5401

pfam17380

Family of unknown function (DUF5401); This is a family of unknown function found in ...

1056-1263

4.17e-08

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.

Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 58.60 E-value: 4.17e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1056 NKPSYKENEY-DQMEKNVEDETYSEEFGLFEEARKTETGRIEEEskKKEAMKRAEDARRIEE---ARRAEDARRI----E 1127
Cdd:pfam17380  261 NGQTMTENEFlNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQE--KEEKAREVERRRKLEEaekARQAEMDRQAaiyaE 338

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1128 EARRA-EDARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRRAELRKAEDARR-IEAARRY-----ENERRIEEA 1200
Cdd:pfam17380  339 QERMAmERERELERIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQeLEAARKVkileeERQRKIQQQ 418

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 914546577  1201 RRYEDEKRIEAvkraEEVRKDEEEAKRAEKERNNEEIRKFEEARMAHFAR-RQAaiKAEEKRKA 1263
Cdd:pfam17380  419 KVEMEQIRAEQ----EEARQREVRRLEEERAREMERVRLEEQERQQQVERlRQQ--EEERKRKK 476

MAP7

pfam05672

MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ...

1085-1214

4.98e-08

MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.

Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 54.28 E-value: 4.98e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1085 EEARKTETGRIEEEskKKEAMKRAEDARRIEEARraedARRIEEARRAEDARRveiaRRVEDARRIEISRRAEDAK--RI 1162
Cdd:pfam05672   25 EQREREEQERLEKE--EEERLRKEELRRRAEEER----ARREEEARRLEEERR----REEEERQRKAEEEAEEREQreQE 94

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 914546577  1163 EAARRAIEVRRAELRKAEDARRieaaRRYENERRI--EEARRYEDEKRIEAV-KR 1214
Cdd:pfam05672   95 EQERLQKQKEEAEAKAREEAER----QRQEREKIMqqEEQERLERKKRIEEImKR 145

Caldesmon

pfam02029

Caldesmon;

1027-1262

6.57e-08

Caldesmon;

Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 57.57 E-value: 6.57e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1027 KEKEINNEPI-DNVNETKINrkshvNSMERNKPSYKENEYDQME-KNVEDETYSEEFGLFEEARKTETGRIEEESKKKEa 1104
Cdd:pfam02029   87 KEFDPTIADEkESVAERKEN-----NEEEENSSWEKEEKRDSRLgRYKEEETEIREKEYQENKWSTEVRQAEEEGEEEE- 160

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1105 mKRAEDARRIEEARRAEDARRIEEARraEDARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRRAELRKAEDARR 1184
Cdd:pfam02029  161 -DKSEEAEEVPTENFAKEEVKDEKIK--KEKKVKYESKVFLDQKRGHPEVKSQNGEEEVTKLKVTTKRRQGGLSQSQERE 237

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1185 IEAARRYENERRIEEARRYEDEKRIEAVKRAEEvRKDEEEAKRAEKERNNEEIRKFEEA----RMAHFARRQAAiKAEEK 1260
Cdd:pfam02029  238 EEAEVFLEAEQKLEELRRRRQEKESEEFEKLRQ-KQQEAELELEELKKKREERRKLLEEeeqrRKQEEAERKLR-EEEEK 315


                   ..
gi 914546577  1261 RK 1262
Cdd:pfam02029  316 RR 317

YqiK

COG2268

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];

1103-1265

2.59e-07

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];

Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 55.26 E-value: 2.59e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1103 EAMKRAEDARRIEEARRAEdARRIEEARRAEDARRVEIARrVEDARRIEISRRAEdakrieaARRAIEVRRAELRKAEDA 1182
Cdd:COG2268   189 LGRRKIAEIIRDARIAEAE-AERETEIAIAQANREAEEAE-LEQEREIETARIAE-------AEAELAKKKAEERREAET 259

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1183 RRIEAARRYENERriEEARRyEDEKRIEAVKRAEEVRkdeeeakraekernneeirkfeearmahfARRQAAIKAEEKRK 1262
Cdd:COG2268   260 ARAEAEAAYEIAE--ANAER-EVQRQLEIAEREREIE-----------------------------LQEKEAEREEAELE 307


                  ...
gi 914546577 1263 ADE 1265
Cdd:COG2268   308 ADV 310

ARGLU

pfam15346

Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is ...

1094-1218

5.96e-07

Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is required for the oestrogen-dependent expression of ESR1 target genes. It functions in cooperation with MED1. The family of proteins is found in eukaryotes.

Pssm-ID: 405931 [Multi-domain] Cd Length: 151 Bit Score: 51.21 E-value: 5.96e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1094 RIEEESKKKEAMKRAEDARRIEEARRAedarrIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRIEAARraievrr 1173
Cdd:pfam15346   23 RVEEELEKRKDEIEAEVERRVEEARKI-----MEKQVLEELEREREAELEEERRKEEEERKKREELERILEEN------- 90

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 914546577  1174 aeLRKAEDARRIEAARRY---ENERRIEEARRYEDEKRIEAVKRAEEV 1218
Cdd:pfam15346   91 --NRKIEEAQRKEAEERLamlEEQRRMKEERQRREKEEEEREKREQQK 136

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

1064-1217

6.32e-07

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.92 E-value: 6.32e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1064 EYDQMEKNVED-ETYSEEFGLFEEARKTETGRiEEESKKKEAMKRAEDARRIEEARRA---EDARRIEEARRAEDARRVE 1139
Cdd:COG4913   263 RYAAARERLAElEYLRAALRLWFAQRRLELLE-AELEELRAELARLEAELERLEARLDalrEELDELEAQIRGNGGDRLE 341

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1140 -IARRVEDARRiEISRRAEDAKRIEAARRAIEVRRAELRKAEDARRIEAARR---YENERRIEEARRYEDEKRIEAVKRA 1215
Cdd:COG4913   342 qLEREIERLER-ELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALleaLEEELEALEEALAEAEAALRDLRRE 420


                  ..
gi 914546577 1216 EE 1217
Cdd:COG4913   421 LR 422

HrpB7

pfam09486

Bacterial type III secretion protein (HrpB7); This entry represents proteins encoded by genes ...

1086-1212

1.17e-06

Bacterial type III secretion protein (HrpB7); This entry represents proteins encoded by genes which are found in type III secretion operons in a narrow range of species including Xanthomonas, Burkholderia and Ralstonia.

Pssm-ID: 370523 [Multi-domain] Cd Length: 157 Bit Score: 50.52 E-value: 1.17e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1086 EARKTETGRIEEE-SKKKEAMKRAEDAR--RIEEARRAEDARRIEEARRAE----------------DARRVEIARRVED 1146
Cdd:pfam09486   11 ERRTRRYQRLRAElEAARAALAQAEAALaaAQAQAEQARDRVRAHEERLDDlttggspfsaadylacRAYRDVLEGRVGA 90

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 914546577  1147 ARRIEisRRAEDAkrIEAARRAIEVRRAELRKAE---DA--RRIEAARRYEnERRIEEArryEDEKRIEAV 1212
Cdd:pfam09486   91 AEAAL--AAARQA--LDAAEDAVAATRRKIARNDaqlDVcrERIARLRRAA-ERAREDA---ADEEAEEAA 153

growth_prot_Scy

polarized growth protein Scy;

1083-1218

1.41e-06

polarized growth protein Scy;

Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 53.68 E-value: 1.41e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1083 LFEEARKT-ETGRIEEESKKKEAMKRAEDARriEEARRAEDARRiEEARRAEDARRVEIARRVE---------------- 1145
Cdd:NF041483  518 LRRQAEETlERTRAEAERLRAEAEEQAEEVR--AAAERAARELR-EETERAIAARQAEAAEELTrlhteaeerltaaeea 594

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1146 --DAR----RI------EISR-RAEDAKRIEAARRAIEVRRAELRK--AEDAR-------------RIEAARryENERRI 1197
Cdd:NF041483  595 laDARaeaeRIrreaaeETERlRTEAAERIRTLQAQAEQEAERLRTeaAADASaaraegenvavrlRSEAAA--EAERLK 672

                         170       180
                  ....*....|....*....|.
gi 914546577 1198 EEARRYEDEKRIEAVKRAEEV 1218
Cdd:NF041483  673 SEAQESADRVRAEAAAAAERV 693

DUF4670

pfam15709

Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins ...

989-1217

1.50e-06

Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins in this family are typically between 373 and 763 amino acids in length.

Pssm-ID: 464815 [Multi-domain] Cd Length: 522 Bit Score: 53.03 E-value: 1.50e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577   989 ENHFSFTALTANTVDFNQSVNIRKIEELTEYGNNDDVLKEKEINNEPIDNVNETK-------INRKSHVNSMERNKPSYK 1061
Cdd:pfam15709  288 ESQVSIDGRSSPTQTFVVTGNMESEEERSEEDPSKALLEKREQEKASRDRLRAERaemrrleVERKRREQEEQRRLQQEQ 367

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1062 ENEYDQMEKNVEDE--TYSEEFGLFEEARKTETGRIEEESKKKEAMKRA--EDARRIEEARRaEDARRIEEARRAEDARR 1137
Cdd:pfam15709  368 LERAEKMREELELEqqRRFEEIRLRKQRLEEERQRQEEEERKQRLQLQAaqERARQQQEEFR-RKLQELQRKKQQEEAER 446

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1138 VEiarrVEDARRIEISRR-AEDAKRIeaARRAIEVRRAELRK---AEDARRIEAARRyenERRIEEARRYEDEkriEAVK 1213
Cdd:pfam15709  447 AE----AEKQRQKELEMQlAEEQKRL--MEMAEEERLEYQRQkqeAEEKARLEAEER---RQKEEEAARLALE---EAMK 514


                   ....
gi 914546577  1214 RAEE 1217
Cdd:pfam15709  515 QAQE 518

V-ATPase_G_2

pfam16999

Vacuolar (H+)-ATPase G subunit; This family represents vacuolar (H+)-ATPase G subunit from ...

1153-1220

8.30e-06

Vacuolar (H+)-ATPase G subunit; This family represents vacuolar (H+)-ATPase G subunit from several bacterial and archaeal species. Subunit G is a component of the peripheral stalk of the ATPase complex

Pssm-ID: 339878 [Multi-domain] Cd Length: 104 Bit Score: 46.28 E-value: 8.30e-06

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 914546577  1153 SRRAEDAKRIEAARRAIE--VRRAE------LRKAE-DARRIEAARRyenERRIEEARRYEDEKRIEAVKRAEEVRK 1220
Cdd:pfam16999   12 EREAALDQQIEAARKEAEreVEAAEaeaariLREAEaKAKALQAEYR---QELAAETARIREEARARAEAEAQAVRT 85

PRK12678

transcription termination factor Rho; Provisional

1085-1251

8.63e-06

transcription termination factor Rho; Provisional

Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 51.06 E-value: 8.63e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKkEAMKRAEDARRIEEARRAEDARRIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRIEA 1164
Cdd:PRK12678  100 AKAEAAPAARAAAAAAA-EAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDR 178

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1165 ARRAIEVRRAEL----RKAEDARRIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKF 1240
Cdd:PRK12678  179 EDRQAEAERGERgrreERGRDGDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGR 258

                         170
                  ....*....|.
gi 914546577 1241 EEARMAHFARR 1251
Cdd:PRK12678  259 GGRRGRRFRDR 269

PRK07735

NADH-quinone oxidoreductase subunit C;

1097-1263

9.27e-06

NADH-quinone oxidoreductase subunit C;

Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 50.36 E-value: 9.27e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1097 EESKKKEAMKRaEDARRIEEARRAEDARR--IEEARRAEDARRVEIARRVEDARRIEIS-RRAEDAKRIEAARRAIEVR- 1172
Cdd:PRK07735    2 DPEKDLEDLKK-EAARRAKEEARKRLVAKhgAEISKLEEENREKEKALPKNDDMTIEEAkRRAAAAAKAKAAALAKQKRe 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1173 -----------RAELRKAEDARRIEAARRYENERRIEEARRYEDEK-----RIEAVKRAEEVRKDEEEAKRAEKERNNEE 1236
Cdd:PRK07735   81 gteevteeekaKAKAKAAAAAKAKAAALAKQKREGTEEVTEEEKAAakakaAAAAKAKAAALAKQKREGTEEVTEEEEET 160

                         170       180
                  ....*....|....*....|....*..
gi 914546577 1237 IRKFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:PRK07735  161 DKEKAKAKAAAAAKAKAAALAKQKAAE 187

AMA-1

pfam02430

Apical membrane antigen 1; Apical membrane antigen 1 (AMA-1) is a Plasmodium asexual ...

831-1034

1.17e-05

Pssm-ID: 396824 Cd Length: 432 Bit Score: 50.30 E-value: 1.17e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577   831 PAYYNHLTNECVILGTHEQERTNSCRRTKEEKKKPN----CQILRKTTDSKDWTYVSSFIRPDYETKCPpRYPLKSKVFG 906
Cdd:pfam02430  132 PFVYDEKEKMCYILYSAAQYNQGPRYCDNDSSEEGTsslfCMKPDKSAEDAHLYYGSKNVDPDWEKVCP-RKPLRDAIFG 210

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577   907 TFDQktGKCKSLmDKAYEVGINKFSVCLEYLFLVSPKDL----YNSGRNNY----------------------WGIWAAD 960
Cdd:pfam02430  211 LWVD--GNCVAI-PPVFEEEAEDLEECAKIVFENSASDLdieqYNEELTDYkkikegfknlnlsmiksaiflpLGAFAGD 287

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577   961 H------SVNENNIEIANGKCYHLVVKPTCVIDKENHFSFTALTA-NTVD-FNQSVNIRKIEELTEYGNNDDVLKEKEIN 1032
Cdd:pfam02430  288 RriskgvGMNWATYDKESKKCAIFNVKPTCLINNAGSIALTALSSpLEVDaVNYPCSIYKDEIKKEIGYVSPRAKLKSED 367


                   ..
gi 914546577  1033 NE 1034
Cdd:pfam02430  368 KE 369

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

999-1264

1.27e-05

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.44 E-value: 1.27e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577   999 ANTVDFNQSVNIRKIEELTEYGNNDDVLKEKEINN--EPIDNVNETKINRKSHVNSMERnKPSYKENEYDQMEKNVEDET 1076
Cdd:TIGR02168  668 TNSSILERRREIEELEEKIEELEEKIAELEKALAElrKELEELEEELEQLRKELEELSR-QISALRKDLARLEAEVEQLE 746

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1077 Y-----SEEFGLFEEARKTETGRIEEESKKKEAM--KRAEDARRIEEARRAEDA--RRIEEARRAEDARRVEIARRVEDA 1147
Cdd:TIGR02168  747 EriaqlSKELTELEAEIEELEERLEEAEEELAEAeaEIEELEAQIEQLKEELKAlrEALDELRAELTLLNEEAANLRERL 826

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1148 RRIEiSRRAEDAKRIEAARRAIEVRRAELRKAEDARRIEAARRYENERRIEEARRyEDEKRIEAVKRAEEVRKDEEEAKR 1227
Cdd:TIGR02168  827 ESLE-RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLN-ERASLEEALALLRSELEELSEELR 904

                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 914546577  1228 AEKERNNEEIRKFEEAR--MAHFARRQAAIKAEEKRKAD 1264
Cdd:TIGR02168  905 ELESKRSELRRELEELRekLAQLELRLEGLEVRIDNLQE 943

AtpF

COG0711

FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ...

1086-1190

1.45e-05

FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit b or b' is part of the Pathway/BioSystem: FoF1-type ATP synthase

Pssm-ID: 440475 [Multi-domain] Cd Length: 152 Bit Score: 47.09 E-value: 1.45e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1086 EARKTE-TGRIEE-ESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAEDArrvEIARRVEDARRiEISRRAEDAK-RI 1162
Cdd:COG0711    30 DERQEKiADGLAEaERAKEEAEAALAEYEEKLAEARAEAAEIIAEARKEAEA---IAEEAKAEAEA-EAERIIAQAEaEI 105

                          90       100       110
                  ....*....|....*....|....*....|
gi 914546577 1163 EAARRAIevrRAELRK--AEDArrIEAARR 1190
Cdd:COG0711   106 EQERAKA---LAELRAevADLA--VAIAEK 130

TolA

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

1123-1264

1.58e-05

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442298 [Multi-domain] Cd Length: 485 Bit Score: 49.65 E-value: 1.58e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1123 ARRIEEARRAEDARRveiarrvEDARRIEisrrAEDAKRIEAARRAIEvrRAELRKAEDARRIEAARRYENERRIEEARR 1202
Cdd:COG3064     1 AQEALEEKAAEAAAQ-------ERLEQAE----AEKRAAAEAEQKAKE--EAEEERLAELEAKRQAEEEAREAKAEAEQR 67

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 914546577 1203 yEDEKRIEAVKRAEEVRKDEEEakrAEKERNNEEIRKFEEARMAHFARR-----QAAIKAEEKRKAD 1264
Cdd:COG3064    68 -AAELAAEAAKKLAEAEKAAAE---AEKKAAAEKAKAAKEAEAAAAAEKaaaaaEKEKAEEAKRKAE 130

PRK12678

transcription termination factor Rho; Provisional

1085-1221

2.05e-05

transcription termination factor Rho; Provisional

Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 49.52 E-value: 2.05e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAEDARRIE--EARRAEDARRIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRI 1162
Cdd:PRK12678   73 PAAAARRAARAAAAARQAEQPAAEAAAAKAEaaPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQP 152

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 914546577 1163 EAARRAievrrAELRKAEDARRIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVRKD 1221
Cdd:PRK12678  153 ATEARA-----DAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRR 206

tolA_full

TIGR02794

TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ...

1085-1201

2.15e-05

Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 49.07 E-value: 2.15e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1085 EEARKT--ETGRIEEESKKK---EAMKRAE---DARRIEEARR-AEDARRIEEArrAEDARRVEIARRVEDARRIEISRR 1155
Cdd:TIGR02794  108 EQAAKQaeEKQKQAEEAKAKqaaEAKAKAEaeaERKAKEEAAKqAEEEAKAKAA--AEAKKKAEEAKKKAEAEAKAKAEA 185

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 914546577  1156 AEDAKRIEAARRAIEVRraELRKAEDARRIEAAR----RYENERRIEEAR 1201
Cdd:TIGR02794  186 EAKAKAEEAKAKAEAAK--AKAAAEAAAKAEAEAaaaaAAEAERKADEAE 233

EnvC

COG4942

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

1085-1252

2.36e-05

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 2.36e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARR----------------AEDARRVEIARRVEDAR 1148
Cdd:COG4942    69 RRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRlgrqpplalllspedfLDAVRRLQYLKYLAPAR 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1149 RIEISRRAEDAKRIEAARRAIEVRRAELRKAEDARRiEAARRYENERRIEEARRYEDEKRIEAV-KRAEEVRKDEEEAKR 1227
Cdd:COG4942   149 REQAEELRADLAELAALRAELEAERAELEALLAELE-EERAALEALKAERQKLLARLEKELAELaAELAELQQEAEELEA 227

                         170       180
                  ....*....|....*....|....*
gi 914546577 1228 AEKERNNEEIRKFEEARMAHFARRQ 1252
Cdd:COG4942   228 LIARLEAEAAAAAERTPAAGFAALK 252

SMC_prok_A

TIGR02169

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

1026-1261

2.41e-05

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.68 E-value: 2.41e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1026 LKEKEINNEPIDNVNETKINRKSHVnSMERNKpsyKEnEYDQMEKNVEDETYSEEFGLFEEARKT-ETGRIEEESKKKEA 1104
Cdd:TIGR02169  179 LEEVEENIERLDLIIDEKRQQLERL-RREREK---AE-RYQALLKEKREYEGYELLKEKEALERQkEAIERQLASLEEEL 253

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1105 MKRaedarrieEARRAEDARRIEEARRaedaRRVEIARRVED---ARRIEISRRAEDAK-RIEAARRAIEVRRAELRKAE 1180
Cdd:TIGR02169  254 EKL--------TEEISELEKRLEEIEQ----LLEELNKKIKDlgeEEQLRVKEKIGELEaEIASLERSIAEKERELEDAE 321

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1181 DARRIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEiRKFEEARMAHFARRQAAIKAEEK 1260
Cdd:TIGR02169  322 ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVD-KEFAETRDELKDYREKLEKLKRE 400


                   .
gi 914546577  1261 R 1261
Cdd:TIGR02169  401 I 401

YqiK

COG2268

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];

1007-1200

3.01e-05

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];

Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 48.72 E-value: 3.01e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1007 SVNIRKIEELTEYgnnddvlkekeINNEPIDNVNETKINRKSHVNSMERN-KPSYKENEYDQMEKNVEDETYSEEFGLFE 1085
Cdd:COG2268   173 SVAITDLEDENNY-----------LDALGRRKIAEIIRDARIAEAEAEREtEIAIAQANREAEEAELEQEREIETARIAE 241

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1086 EARKTETGRIEEESKKKEAMKRAEDARRIEEARRAED-ARRIEEARRaedARRVEIARrvedaRRIEISRRAEDA---KR 1161
Cdd:COG2268   242 AEAELAKKKAEERREAETARAEAEAAYEIAEANAEREvQRQLEIAER---EREIELQE-----KEAEREEAELEAdvrKP 313

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 914546577 1162 IEAARRAIEVR-RAELrkaeDARRIEAARRYENERRIEEA 1200
Cdd:COG2268   314 AEAEKQAAEAEaEAEA----EAIRAKGLAEAEGKRALAEA 349

V-ATPase_G_2

pfam16999

Vacuolar (H+)-ATPase G subunit; This family represents vacuolar (H+)-ATPase G subunit from ...

1104-1215

3.03e-05

Pssm-ID: 339878 [Multi-domain] Cd Length: 104 Bit Score: 44.74 E-value: 3.03e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1104 AMKRAEDARRIEEARRaeDARRIEEARRAEDARrveIARRVEdarrieisrraEDAKRIEAARRaiEVRRAELRK-AEDA 1182
Cdd:pfam16999   11 AEREAALDQQIEAARK--EAEREVEAAEAEAAR---ILREAE-----------AKAKALQAEYR--QELAAETARiREEA 72

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 914546577  1183 R-RIEA---ARRYENERRIEEArryedekrIEAVKRA 1215
Cdd:pfam16999   73 RaRAEAeaqAVRTRAEGRLQQA--------VELILRA 101

PTZ00045

apical membrane antigen 1; Provisional

294-485

3.64e-05

apical membrane antigen 1; Provisional

Pssm-ID: 240241 [Multi-domain] Cd Length: 595 Bit Score: 48.83 E-value: 3.64e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  294 CFLPVKKEKGNQWTYASSFIRTDYMTKCpPRFPLNHTMFGyfNYSTGKCETYYMNHEKRTLSFSKCIETLFNN------- 366
Cdd:PTZ00045  271 CFKPDKSKEDNHLLYGSKNVPDDWESKC-PRKPLRNAIFG--LWVDGNCVPIPPVFEVEAESLEECAKIVFENspvasdq 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  367 ------------IKKQDDVNNSSFLWGVWT---IENNANEKT-----NLASMDNT-GSCYFLKKKPTCVLKKENHFSFTI 425
Cdd:PTZ00045  348 ptqyeeltdyekIKEGFKNNNLSMIKSAFLplgSFDSDNYKSkgvgyNWANYDKEsGKCEIFDVVPTCLISDSGYYALTA 427

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 914546577  426 L------TAN-SFNLNQNIIYPELKNNSSKEGSSLIHFKDPKQTNKRVLYENNKKSKRNVRTKINSV 485
Cdd:PTZ00045  428 LsspnevDANfPCSIKEKIVLPRIFISTDKDSPFCPATPLKVSNSTCSFYVCERVEKSCGVKENNEV 494

TolA

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

1085-1255

4.89e-05

Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442298 [Multi-domain] Cd Length: 485 Bit Score: 48.11 E-value: 4.89e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAED---ARRIEEARR---------AEDARRI--EEARRAEDARRVEIARRVEDARRI 1150
Cdd:COG3064    90 EKKAAAEKAKAAKEAEAAAAAEKAAAaaeKEKAEEAKRkaeeeakrkAEEERKAaeAEAAAKAEAEAARAAAAAAAAAAA 169

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1151 EISRRAEDAKRIEAARRAIEVRRAELRKAEDARRIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKRAEK 1230
Cdd:COG3064   170 AAARAAAGAAAALVAAAAAAVEAADTAAAAAAALAAAAAAAAADAALLALAVAARAAAASREAALAAVEATEEAALGGAE 249

                         170       180
                  ....*....|....*....|....*
gi 914546577 1231 ERNNEEIRKFEEARMAHFARRQAAI 1255
Cdd:COG3064   250 EAADLAAVGVLGAALAAAAAGAAAL 274

DUF4670

pfam15709

Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins ...

1091-1259

5.08e-05

Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins in this family are typically between 373 and 763 amino acids in length.

Pssm-ID: 464815 [Multi-domain] Cd Length: 522 Bit Score: 48.41 E-value: 5.08e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1091 ETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAEDARRVEIARRVEDARRIEISRRAEDakriEAARRAIE 1170
Cdd:pfam15709  351 ERKRREQEEQRRLQQEQLERAEKMREELELEQQRRFEEIRLRKQRLEEERQRQEEEERKQRLQLQAAQ----ERARQQQE 426

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1171 VRRAELRKAEDARRIEAARRYENERRieeaRRYEDEKRI-EAVKR----AEEVR---KDEEEAKRAEKERNNEEIRKFEE 1242
Cdd:pfam15709  427 EFRRKLQELQRKKQQEEAERAEAEKQ----RQKELEMQLaEEQKRlmemAEEERleyQRQKQEAEEKARLEAEERRQKEE 502

                          170       180
                   ....*....|....*....|
gi 914546577  1243 --ARMA-HFARRQAAIKAEE 1259
Cdd:pfam15709  503 eaARLAlEEAMKQAQEQARQ 522

YhaN

COG4717

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

1062-1252

5.20e-05

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.23 E-value: 5.20e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1062 ENEYDQMEK--NVEDETYSEEFGLFEEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAEDARRVE 1139
Cdd:COG4717    52 EKEADELFKpqGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLY 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1140 IARRVEDARRIEISRRAEDAKR----IEAARRAIEVRRAELRKAE-DARRIEAARRYENERRIEEARRyedekRIEAVKR 1214
Cdd:COG4717   132 QELEALEAELAELPERLEELEErleeLRELEEELEELEAELAELQeELEELLEQLSLATEEELQDLAE-----ELEELQQ 206

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 914546577 1215 AEEVRKDEEEAKRAEKERNNEEIRKFEEARMAHFARRQ 1252
Cdd:COG4717   207 RLAELEEELEEAQEELEELEEELEQLENELEAAALEER 244

AtpF

COG0711

FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ...

1116-1202

5.86e-05

FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit b or b' is part of the Pathway/BioSystem: FoF1-type ATP synthase

Pssm-ID: 440475 [Multi-domain] Cd Length: 152 Bit Score: 45.16 E-value: 5.86e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1116 EARRAEDARRIEEARRAE---DARRVEIARRVEDARRiEISRRAEDAKriEAARRAIEVRRAELRkAEDARRIEAArrye 1192
Cdd:COG0711    30 DERQEKIADGLAEAERAKeeaEAALAEYEEKLAEARA-EAAEIIAEAR--KEAEAIAEEAKAEAE-AEAERIIAQA---- 101

                          90
                  ....*....|
gi 914546577 1193 nERRIEEARR 1202
Cdd:COG0711   102 -EAEIEQERA 110

PDCD7

pfam16021

Programmed cell death protein 7;

1066-1190

6.35e-05

Programmed cell death protein 7;

Pssm-ID: 464979 [Multi-domain] Cd Length: 305 Bit Score: 47.41 E-value: 6.35e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1066 DQMEKNVEDE-TYSEEFGLFEEARKT--------ETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAE--- 1133
Cdd:pfam16021   25 LELRENVEDDsVWSESYSRAAELKHElqekllllEDPELLESLKRKLERRQKKRLRRKRRKEERKEEKKEEQERRAErea 104

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 914546577  1134 --DARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRR--AELRKAEDARRI--EAARR 1190
Cdd:pfam16021  105 kiDKWRRKQIQEVEEKKRERELKLAADAVLSEVRKKQADAKRmlDILRSLEKLRKLrkEAARR 167

YhaN

COG4717

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

1009-1190

7.13e-05

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 7.13e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1009 NIRKIEELTEYgnnddvLKEKEINNEPIDNVNETKINRKSHVNSMERNKPSyKENEYDQMEKNVEDETYSEEFGLFEEAR 1088
Cdd:COG4717    69 NLKELKELEEE------LKEAEEKEEEYAELQEELEELEEELEELEAELEE-LREELEKLEKLLQLLPLYQELEALEAEL 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1089 KTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARR----AEDARRVEIARRVEDA--RRIEISRRAEDAK-R 1161
Cdd:COG4717   142 AELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEqlslATEEELQDLAEELEELqqRLAELEEELEEAQeE 221

                         170       180
                  ....*....|....*....|....*....
gi 914546577 1162 IEAARRAIEVRRAELRKAEDARRIEAARR 1190
Cdd:COG4717   222 LEELEEELEQLENELEAAALEERLKEARL 250

HrpB7

pfam09486

Bacterial type III secretion protein (HrpB7); This entry represents proteins encoded by genes ...

1106-1251

9.41e-05

Pssm-ID: 370523 [Multi-domain] Cd Length: 157 Bit Score: 44.74 E-value: 9.41e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1106 KRAEDARRIEEARRAEDAR---RIEEARRAEDARRVEIARRVEDARRIEISRRAEDAK---------------------- 1160
Cdd:pfam09486    1 RRASAWRTLVERRTRRYQRlraELEAARAALAQAEAALAAAQAQAEQARDRVRAHEERlddlttggspfsaadylacray 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1161 ------RIEAARRAIEVRRAELRKAEDARRIEAARRYENERRIEEARRyedekRIEAVKRAEEVRKDeeeakraekerNN 1234
Cdd:pfam09486   81 rdvlegRVGAAEAALAAARQALDAAEDAVAATRRKIARNDAQLDVCRE-----RIARLRRAAERARE-----------DA 144

                          170
                   ....*....|....*..
gi 914546577  1235 EEirkfEEARMAHFARR 1251
Cdd:pfam09486  145 AD----EEAEEAALARR 157

TPH

pfam13868

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...

1061-1262

1.22e-04

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.

Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 46.45 E-value: 1.22e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1061 KENEYDQMEKNVEDEtYSEEFglfEEARKtetgRIEEESKKKEAMKRA----EDARRIEEARRAEDARRIEEARRAEDAR 1136
Cdd:pfam13868   96 KLQEREQMDEIVERI-QEEDQ---AEAEE----KLEKQRQLREEIDEFneeqAEWKELEKEEEREEDERILEYLKEKAER 167

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1137 RVEIA---RRVEDARRIEISRRAEDAKRIEAARRAIEVRRAElrkaedaRRIEAARRYENERRIEEARRYEDEKRIEAVK 1213
Cdd:pfam13868  168 EEEREaerEEIEEEKEREIARLRAQQEKAQDEKAERDELRAK-------LYQEEQERKERQKEREEAEKKARQRQELQQA 240

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 914546577  1214 RAEEVRkdeeeakraekerNNEEIRKFEEARMAHFARRQAAIKAEEKRK 1262
Cdd:pfam13868  241 REEQIE-------------LKERRLAEEAEREEEEFERMLRKQAEDEEI 276

ERM_helical

pfam20492

Ezrin/radixin/moesin, alpha-helical domain; The ERM family consists of three closely-related ...

1062-1175

1.57e-04

Ezrin/radixin/moesin, alpha-helical domain; The ERM family consists of three closely-related proteins, ezrin, radixin and moesin. Ezrin was first identified as a constituent of microvilli, radixin as a barbed, end-capping actin-modulating protein from isolated junctional fractions, and moesin as a heparin binding protein. A tumour suppressor molecule responsible for neurofibromatosis type 2 (NF2) is highly similar to ERM proteins and has been designated merlin (moesin-ezrin-radixin-like protein). ERM molecules contain 3 domains, an N-terminal globular domain, an extended alpha-helical domain and a charged C-terminal domain (pfam00769). Ezrin, radixin and merlin also contain a polyproline linker region between the helical and C-terminal domains. The N-terminal domain is highly conserved and is also found in merlin, band 4.1 proteins and members of the band 4.1 superfamily, designated the FERM domain. ERM proteins crosslink actin filaments with plasma membranes. They co-localize with CD44 at actin filament plasma membrane interaction sites, associating with CD44 via their N-terminal domains and with actin filaments via their C-terminal domains. This is the alpha-helical domain, which is involved in intramolecular masking of protein-protein interaction sites, regulating the activity of this proteins.

Pssm-ID: 466641 [Multi-domain] Cd Length: 120 Bit Score: 43.37 E-value: 1.57e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1062 ENEYDQMEKNVEDETYSEEfGLFEEARKTETGRIEEESKKKEAMkraEDARRIEEARRAEDARRIEEARRAEDARRvEIA 1141
Cdd:pfam20492   19 EEETKKAQEELEESEETAE-ELEEERRQAEEEAERLEQKRQEAE---EEKERLEESAEMEAEEKEQLEAELAEAQE-EIA 93

                           90       100       110
                   ....*....|....*....|....*....|....
gi 914546577  1142 RRVEDARRieisrRAEDAKRIEAarRAIEVRRAE 1175
Cdd:pfam20492   94 RLEEEVER-----KEEEARRLQE--ELEEAREEE 120

HCR

pfam07111

Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ...

1079-1221

1.87e-04

Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.

Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 46.67 E-value: 1.87e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1079 EEFGLFEEARKTETGRIEEESKKKEAMKRAEDARRIE-EARR-----AEDARR-IEEARRAE----------------DA 1135
Cdd:pfam07111   80 EEVRLLRETSLQQKMRLEAQAMELDALAVAEKAGQAEaEGLRaalagAEMVRKnLEEGSQREleeiqrlhqeqlssltQA 159

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1136 RRVEIARRVEDARRIEIS------RRAEDAKRIEAARRAIEVRRAELRKAEDARR-----IEAARRYENERRIEEARRY- 1203
Cdd:pfam07111  160 HEEALSSLTSKAEGLEKSlnsletKRAGEAKQLAEAQKEAELLRKQLSKTQEELEaqvtlVESLRKYVGEQVPPEVHSQt 239

                          170       180
                   ....*....|....*....|.
gi 914546577  1204 ---EDEKRIEAVKRAEEVRKD 1221
Cdd:pfam07111  240 welERQELLDTMQHLQEDRAD 260

COG2433

Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];

1085-1221

2.86e-04

Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];

Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.00 E-value: 2.86e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEdaRRIEEAR------RAE-DARRVEIARRVEDARRIEISRRAE 1157
Cdd:COG2433   383 EELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLE--EQVERLEaeveelEAElEEKDERIERLERELSEARSEERRE 460

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 914546577 1158 DAKRIEAARRAIEVRR--AELRKAEdaRRIEaarryENERRIEEARRYEDE---KRIEAVKRAEEVRKD 1221
Cdd:COG2433   461 IRKDREISRLDREIERleRELEEER--ERIE-----ELKRKLERLKELWKLehsGELVPVKVVEKFTKE 522

YhaN

COG4717

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

1094-1263

2.90e-04

Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];

Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 2.90e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1094 RIEEESK---KKEAMKRAEDARRIEEARRaedarRIEEARRAEDARRVEIARRVEDARRIEisrraedakRIEAARRAIE 1170
Cdd:COG4717    50 RLEKEADelfKPQGRKPELNLKELKELEE-----ELKEAEEKEEEYAELQEELEELEEELE---------ELEAELEELR 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1171 VRRAELRKAEDARRIEAARRYENERRIEEARRYED-EKRIEAVKRAE-----------EVRKDEEEAKRAEKERNNEEI- 1237
Cdd:COG4717   116 EELEKLEKLLQLLPLYQELEALEAELAELPERLEElEERLEELRELEeeleeleaelaELQEELEELLEQLSLATEEELq 195

                         170       180
                  ....*....|....*....|....*....
gi 914546577 1238 ---RKFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:COG4717   196 dlaEELEELQQRLAELEEELEEAQEELEE 224

COG2433

Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];

1066-1217

3.06e-04

Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];

Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.00 E-value: 3.06e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1066 DQMEKNVEDETYSEEFGLFEEARKTETGRiEEESKKKEAMKRAEDARRIEEARRAEDARRIEEA-RRAEDARRVEiarRV 1144
Cdd:COG2433   384 ELIEKELPEEEPEAEREKEHEERELTEEE-EEIRRLEEQVERLEAEVEELEAELEEKDERIERLeRELSEARSEE---RR 459

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 914546577 1145 EDARRIEISRRAEDAKR----IEAARRAIEVRRAELRKAEDARRIEAARRYENERRIEEARRyedekriEAVKRAEE 1217
Cdd:COG2433   460 EIRKDREISRLDREIERlereLEEERERIEELKRKLERLKELWKLEHSGELVPVKVVEKFTK-------EAIRRLEE 529

EnvC

COG4942

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

1094-1266

3.63e-04

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.63e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1094 RIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAEDARRVEIARRVEDA-RRIEISRR--AEDAKRIEAARRAIE 1170
Cdd:COG4942    21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALeQELAALEAelAELEKEIAELRAELE 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1171 VRRAELRK-------------------AEDARriEAARRYENERRIEEARR------YEDEKRIEAVKRAEEVRKDEEEA 1225
Cdd:COG4942   101 AQKEELAEllralyrlgrqpplalllsPEDFL--DAVRRLQYLKYLAPARReqaeelRADLAELAALRAELEAERAELEA 178

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 914546577 1226 KRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEKRKADEL 1266
Cdd:COG4942   179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQ 219

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

1106-1263

3.77e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 3.77e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1106 KRAEDARRIEEARR--AEDARRIEEARRAEDA--RRVEIARRVEDARRIEIsrraeDAKRIEAARRAIEVRRAELRKAED 1181
Cdd:COG4913   611 KLAALEAELAELEEelAEAEERLEALEAELDAlqERREALQRLAEYSWDEI-----DVASAEREIAELEAELERLDASSD 685

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1182 A-RRIEAaRRYENERRIEEARRyEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEK 1260
Cdd:COG4913   686 DlAALEE-QLEELEAELEELEE-ELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAV 763


                  ...
gi 914546577 1261 RKA 1263
Cdd:COG4913   764 ERE 766

tolA

cell envelope integrity inner membrane protein TolA; Provisional

1097-1264

3.86e-04

cell envelope integrity inner membrane protein TolA; Provisional

Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 45.18 E-value: 3.86e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1097 EESKKKEAMKRAEDARRiEEARRAEDARRIEEARRAEDarrvEIARRVEDARRIEisrRAEDAKRIEAARRAIEVRRAEl 1176
Cdd:PRK09510   78 EEQRKKKEQQQAEELQQ-KQAAEQERLKQLEKERLAAQ----EQKKQAEEAAKQA---ALKQKQAEEAAAKAAAAAKAK- 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1177 RKAEDARRIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKRAEKERnnEEIRKFEEARMAHFARRQAAIK 1256
Cdd:PRK09510  149 AEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAE--AEAKKKAAAEAKKKAAAEAKAA 226

                         170
                  ....*....|...
gi 914546577 1257 AEE-----KRKAD 1264
Cdd:PRK09510  227 AAKaaaeaKAAAE 239

PRK12678

transcription termination factor Rho; Provisional

1085-1221

4.09e-04

transcription termination factor Rho; Provisional

Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 45.28 E-value: 4.09e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAmKRAEDARRIEEARRAEDARRIEEARRAEDARRVEIARRV--EDARRIEISRRAEDAKRI 1162
Cdd:PRK12678   56 KEARGGGAAAAAATPAAPAA-AARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAaaEAASAPEAAQARERRERG 134

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1163 EAARRAIEVRRAELRKAEDAR-RIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVRKD 1221
Cdd:PRK12678  135 EAARRGAARKAGEGGEQPATEaRADAAERTEEEERDERRRRGDREDRQAEAERGERGRRE 194

PRK12678

transcription termination factor Rho; Provisional

1085-1221

5.79e-04

transcription termination factor Rho; Provisional

Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 44.89 E-value: 5.79e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAEDARRVE---IARRVEDARRIEISRRAE---- 1157
Cdd:PRK12678  135 EAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGErgrREERGRDGDDRDRRDRREqgdr 214

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 914546577 1158 ---DAKRIEAARRAIEVRRAELRKAEDARRIEAARRYENERRIEEARR-----YEDEKR----IEAVKRAEEVRKD 1221
Cdd:PRK12678  215 reeRGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRgrrfrDRDRRGrrggDGGNEREPELRED 290

DUF4670

pfam15709

Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins ...

1095-1261

5.96e-04

Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins in this family are typically between 373 and 763 amino acids in length.

Pssm-ID: 464815 [Multi-domain] Cd Length: 522 Bit Score: 44.94 E-value: 5.96e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1095 IEEESKKKEAMK--RAEDA--RRIEEARRaedaRRIEEARRAEDARRVEIARRVEDARRIEISRRAEdAKRIEAARRAIE 1170
Cdd:pfam15709  325 LEKREQEKASRDrlRAERAemRRLEVERK----RREQEEQRRLQQEQLERAEKMREELELEQQRRFE-EIRLRKQRLEEE 399

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1171 VRRAELRKAEDARRIEAARryENERRIEEARR-----YEDEKRIEAVKRAEEvrkdeeeakraekernNEEIRKFEEARM 1245
Cdd:pfam15709  400 RQRQEEEERKQRLQLQAAQ--ERARQQQEEFRrklqeLQRKKQQEEAERAEA----------------EKQRQKELEMQL 461

                          170
                   ....*....|....*.
gi 914546577  1246 AHFARRQAAIkAEEKR 1261
Cdd:pfam15709  462 AEEQKRLMEM-AEEER 476

PRK12472

hypothetical protein; Provisional

1091-1201

6.11e-04

hypothetical protein; Provisional

Pssm-ID: 237110 [Multi-domain] Cd Length: 508 Bit Score: 44.86 E-value: 6.11e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1091 ETGRIEEESKKKEAMKRAEDA------RRIEEARRAEDArRIEEARRAEDARRVEIAR-RVEDARRIEISRRAEDAKRIE 1163
Cdd:PRK12472  201 DAARAADEAKTAAAAAAREAAplkaslRKLERAKARADA-ELKRADKALAAAKTDEAKaRAEERQQKAAQQAAEAATQLD 279

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 914546577 1164 AARRAIEVRRAELRKAEDARRIEAARRYENERRIEEAR 1201
Cdd:PRK12472  280 TAKADAEAKRAAAAATKEAAKAAAAKKAETAKAATDAK 317

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

1086-1264

6.20e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 6.20e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1086 EARKTETGRIEEEskKKEAMKRAEDARRIEEA--RRAEDARRIEEARRAE-DARRVEiaRRVEDARRiEISRRAEDAKRI 1162
Cdd:COG4913   613 AALEAELAELEEE--LAEAEERLEALEAELDAlqERREALQRLAEYSWDEiDVASAE--REIAELEA-ELERLDASSDDL 687

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1163 EAARRAIEVRRAELRKAEDARRIEAARRYENERRIEEARryEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEE 1242
Cdd:COG4913   688 AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAE--EELDELQDRLEAAEDLARLELRALLEERFAAALGDAVER 765

                         170       180
                  ....*....|....*....|..
gi 914546577 1243 ARMAHFARRQAAIKAEEKRKAD 1264
Cdd:COG4913   766 ELRENLEERIDALRARLNRAEE 787

growth_prot_Scy

polarized growth protein Scy;

1085-1264

6.70e-04

polarized growth protein Scy;

Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 44.82 E-value: 6.70e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEAR----------RAEDARRV---------------- 1138
Cdd:NF041483  233 EATDHAEQLRSSTAAESDQARRQAAELSRAAEQRMQEAEEALREARaeaekvvaeaKEAAAKQLasaesaneqrtrtake 312

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1139 EIARRV-----------EDARRIEISRRAEDAKRI-EAARRAIEV-------------RRAE--LRKA-EDARRIEAARR 1190
Cdd:NF041483  313 EIARLVgeatkeaealkAEAEQALADARAEAEKLVaEAAEKARTVaaedtaaqlakaaRTAEevLTKAsEDAKATTRAAA 392

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1191 YENERRIEEARRYEDEKRIEAVKRAEEVR---KDEEEAKRAEKERNNEEIRKF-------------EEARMAHFARRQA- 1253
Cdd:NF041483  393 EEAERIRREAEAEADRLRGEAADQAEQLKgaaKDDTKEYRAKTVELQEEARRLrgeaeqlraeavaEGERIRGEARREAv 472

                         250       260
                  ....*....|....*....|
gi 914546577 1254 ------AIKAEE---KRKAD 1264
Cdd:NF041483  473 qqieeaARTAEElltKAKAD 492

PDCD7

pfam16021

Programmed cell death protein 7;

1095-1220

7.00e-04

Programmed cell death protein 7;

Pssm-ID: 464979 [Multi-domain] Cd Length: 305 Bit Score: 43.95 E-value: 7.00e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1095 IEEESKKKEAMKRAEDARR--IEEARRAEDARRIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVR 1172
Cdd:pfam16021   31 VEDDSVWSESYSRAAELKHelQEKLLLLEDPELLESLKRKLERRQKKRLRRKRRKEERKEEKKEEQERRAEREAKIDKWR 110

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 914546577  1173 RAELRKAEDARRIEAARR------YENERRIEEARRYEDekRIEAVKRAEEVRK 1220
Cdd:pfam16021  111 RKQIQEVEEKKRERELKLaadavlSEVRKKQADAKRMLD--ILRSLEKLRKLRK 162

PRK13428

F0F1 ATP synthase subunit delta; Provisional

1102-1219

7.03e-04

F0F1 ATP synthase subunit delta; Provisional

Pssm-ID: 184048 [Multi-domain] Cd Length: 445 Bit Score: 44.34 E-value: 7.03e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1102 KEAMKRAEDARRIEEARRAEDARRIEEARRA-----EDARRvEIARRVEDARrieisrraEDAKRIEAARRAIEVRRAEL 1176
Cdd:PRK13428   27 RRLMAARQDTVRQQLAESATAADRLAEADQAhtkavEDAKA-EAARVVEEAR--------EDAERIAEQLRAQADAEAER 97

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 914546577 1177 RKAEDARRIEAARRyenerriEEARRYEDEKRIEAVKRAEE-VR 1219
Cdd:PRK13428   98 IKVQGARQVQLLRA-------QLTRQLRLELGHESVRQAGElVR 134

HflC

COG0330

Regulator of protease activity HflC, stomatin/prohibitin superfamily [Posttranslational ...

1113-1219

8.27e-04

Regulator of protease activity HflC, stomatin/prohibitin superfamily [Posttranslational modification, protein turnover, chaperones];

Pssm-ID: 440099 [Multi-domain] Cd Length: 279 Bit Score: 43.67 E-value: 8.27e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1113 RIEEARRAedARRIEEARR-----AEDARRVEIARR-VEDA---RRIEISRRAEDAKRIEAARRAIEVRRAELRKAE--- 1180
Cdd:COG0330    90 RITDPAKF--LYNVENAEEalrqlAESALREVIGKMtLDEVlstGRDEINAEIREELQEALDPYGIEVVDVEIKDIDppe 167

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 914546577 1181 ---DA-RRIEAARRyENERRIEEARRYEDEKRIEAVKRAEEVR 1219
Cdd:COG0330   168 evqDAmEDRMKAER-EREAAILEAEGYREAAIIRAEGEAQRAI 209

EnvC

COG4942

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...

1085-1264

9.02e-04

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 9.02e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKKKEAMKRAEDARRIE----EARRAEDARRIEEARRAEDARRVEIAR---RVEDARRIEISRRAE 1157
Cdd:COG4942    26 EAELEQLQQEIAELEKELAALKKEEKALLKQlaalERRIAALARRIRALEQELAALEAELAElekEIAELRAELEAQKEE 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1158 DAKRIEAARRAIEVRRAEL----RKAEDARRIEAARRYENERRIEEARRYEDE-KRIEAVKRAEEVRKDEEEAKRAEKER 1232
Cdd:COG4942   106 LAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADlAELAALRAELEAERAELEALLAELEE 185

                         170       180       190
                  ....*....|....*....|....*....|..
gi 914546577 1233 NNEEIRKFEEARMAHFARRQAAIKAEEKRKAD 1264
Cdd:COG4942   186 ERAALEALKAERQKLLARLEKELAELAAELAE 217

DR0291

COG1579

Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ...

1112-1263

9.29e-04

Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];

Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 9.29e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1112 RRIEEARRA--EDARRIEEARRAEDARRVEIARRVEDARRiEISRRAEDakrIEAARRAIEVRRAELRKAEDARRIEAAR 1189
Cdd:COG1579    20 DRLEHRLKElpAELAELEDELAALEARLEAAKTELEDLEK-EIKRLELE---IEEVEARIKKYEEQLGNVRNNKEYEALQ 95

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 914546577 1190 R--YENERRIEEArryedEKRI-EAVKRAEEVRKDEeeakraekernnEEIRKFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:COG1579    96 KeiESLKRRISDL-----EDEIlELMERIEELEEEL------------AELEAELAELEAELEEKKAELDEELAELE 155

tolA

cell envelope integrity inner membrane protein TolA; Provisional

1046-1264

9.75e-04

cell envelope integrity inner membrane protein TolA; Provisional

Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 43.64 E-value: 9.75e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1046 RKSHVNSMERNKPSYKENEYDQMEKNVEDEtyseefglfEEARKTETGRIEEESKKKEAMKRAEDARriEEARRAEDARr 1125
Cdd:PRK09510   71 QKSAKRAEEQRKKKEQQQAEELQQKQAAEQ---------ERLKQLEKERLAAQEQKKQAEEAAKQAA--LKQKQAEEAA- 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1126 ieeARRAEDARrveiARRVEDARRIeisrrAEDAKRIEAARRAIEVRRAELRKAEDARRIEAArryenerriEEARRYED 1205
Cdd:PRK09510  139 ---AKAAAAAK----AKAEAEAKRA-----AAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEA---------EAAAKAAA 197

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 914546577 1206 EKRIEAVKRAEEVRKDEEeakraekernnEEIRKFEEARMAHFARRQAAIKAEEKRKAD 1264
Cdd:PRK09510  198 EAKKKAEAEAKKKAAAEA-----------KKKAAAEAKAAAAKAAAEAKAAAEKAAAAK 245

PRK02224

DNA double-strand break repair Rad50 ATPase;

1050-1227

1.13e-03

DNA double-strand break repair Rad50 ATPase;

Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 44.26 E-value: 1.13e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1050 VNSMERNKPSYKENEYDQMEKNVEDETYSEEFGLfEEARKTETGRIEE-ESKKKEAMKRAEDA---------RRIEEARR 1119
Cdd:PRK02224  178 VERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGL-ESELAELDEEIERyEEQREQARETRDEAdevleeheeRREELETL 256

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1120 AEDARRIEEARRAEDARRVEIARRVEDARRI------EISRRAEDAKRIEAARRAIEVRRAELRKAEDarrieaarryEN 1193
Cdd:PRK02224  257 EAEIEDLRETIAETEREREELAEEVRDLRERleeleeERDDLLAEAGLDDADAEAVEARREELEDRDE----------EL 326

                         170       180       190
                  ....*....|....*....|....*....|....
gi 914546577 1194 ERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKR 1227
Cdd:PRK02224  327 RDRLEECRVAAQAHNEEAESLREDADDLEERAEE 360

growth_prot_Scy

polarized growth protein Scy;

1096-1219

1.30e-03

polarized growth protein Scy;

Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 44.05 E-value: 1.30e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1096 EEESKKKEAMKRAeDARRIEEARRAEdaRRIEEARRAEDARRVEIARRVEDARRIEISRRAEDAKRIEAARRAIEVRRAE 1175
Cdd:NF041483  667 EAERLKSEAQESA-DRVRAEAAAAAE--RVGTEAAEALAAAQEEAARRRREAEETLGSARAEADQERERAREQSEELLAS 743

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 914546577 1176 LRKAEDARRIEAARRYenerriEEARRYEDEKRIEAVKRAEEVR 1219
Cdd:NF041483  744 ARKRVEEAQAEAQRLV------EEADRRATELVSAAEQTAQQVR 781

tolA

cell envelope integrity inner membrane protein TolA; Provisional

1108-1263

1.60e-03

cell envelope integrity inner membrane protein TolA; Provisional

Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 43.26 E-value: 1.60e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1108 AEDARRIEE----ARRAEDARRIEEARRAEDARRvEIARRVEDARRIEISRRAEDAKR---IEAARRAievrRAELRKAE 1180
Cdd:PRK09510   61 VEQYNRQQQqqksAKRAEEQRKKKEQQQAEELQQ-KQAAEQERLKQLEKERLAAQEQKkqaEEAAKQA----ALKQKQAE 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1181 DARRIEAAR-----RYENERRIEEARRYEDEKRIEAvkRAEEVRKDEeeakraekernnEEIRKFEEARMAHFARRQAAI 1255
Cdd:PRK09510  136 EAAAKAAAAakakaEAEAKRAAAAAKKAAAEAKKKA--EAEAAKKAA------------AEAKKKAEAEAAAKAAAEAKK 201


                  ....*...
gi 914546577 1256 KAEEKRKA 1263
Cdd:PRK09510  202 KAEAEAKK 209

ERM_helical

pfam20492

Ezrin/radixin/moesin, alpha-helical domain; The ERM family consists of three closely-related ...

1094-1202

1.97e-03

Pssm-ID: 466641 [Multi-domain] Cd Length: 120 Bit Score: 39.90 E-value: 1.97e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1094 RIEEESKK-KEAMKRAED-ARRIEE-ARRAEDARRIEEARRAEDARrvEIARRVEDARRIEISRRAEDAKRIEAARRAIE 1170
Cdd:pfam20492   17 QYEEETKKaQEELEESEEtAEELEEeRRQAEEEAERLEQKRQEAEE--EKERLEESAEMEAEEKEQLEAELAEAQEEIAR 94

                           90       100       110
                   ....*....|....*....|....*....|..
gi 914546577  1171 VRRAELRKAEDARRIEAarryenerRIEEARR 1202
Cdd:pfam20492   95 LEEEVERKEEEARRLQE--------ELEEARE 118

PRK05035

electron transport complex protein RnfC; Provisional

1085-1263

1.99e-03

electron transport complex protein RnfC; Provisional

Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 43.40 E-value: 1.99e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1085 EEARKTETGRIEEESKK----KEAMKRAEDARRIEEARRAEDAR-------RIEEARRAEDARRVEIARRVEDARRIEIS 1153
Cdd:PRK05035  443 QEKKKAEEAKARFEARQarleREKAAREARHKKAAEARAAKDKDavaaalaRVKAKKAAATQPIVIKAGARPDNSAVIAA 522

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1154 RRAEDAKRIEAARRAIE--------------VRRAELRKAEDARRIEAARRYENERRIEEARRYEDEKRIEAVKRAEEVR 1219
Cdd:PRK05035  523 REARKAQARARQAEKQAaaaadpkkaavaaaIARAKAKKAAQQAANAEAEEEVDPKKAAVAAAIARAKAKKAAQQAASAE 602

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 914546577 1220 KDEEEAKRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEKRKA 1263
Cdd:PRK05035  603 PEEQVAEVDPKKAAVAAAIARAKAKKAEQQANAEPEEPVDPRKA 646

ATP-synt_Fo_b

cd06503

F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex ...

1082-1190

2.00e-03

Pssm-ID: 349951 [Multi-domain] Cd Length: 132 Bit Score: 40.50 E-value: 2.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1082 GLFEEARKTETGRIEE-ESKKKEAMKRAEDAR-RIEEARrAEDARRIEEARRAEDARRVEIarrVEDARRiEISRRAEDA 1159
Cdd:cd06503    26 KALDEREEKIAESLEEaEKAKEEAEELLAEYEeKLAEAR-AEAQEIIEEARKEAEKIKEEI---LAEAKE-EAERILEQA 100

                          90       100       110
                  ....*....|....*....|....*....|....
gi 914546577 1160 KR-IEAARRAIevrRAELRK--AEDArrIEAARR 1190
Cdd:cd06503   101 KAeIEQEKEKA---LAELRKevADLA--VEAAEK 129

PRK12705

hypothetical protein; Provisional

1088-1214

2.02e-03

hypothetical protein; Provisional

Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 43.16 E-value: 2.02e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1088 RKTETGRIEEESKKK-EAMKRAEDARRIEEARRAEDARRIEEARRAEDARRVE--IARRVE--DARRIEISRRAEDAKRI 1162
Cdd:PRK12705   31 LAKEAERILQEAQKEaEEKLEAALLEAKELLLRERNQQRQEARREREELQREEerLVQKEEqlDARAEKLDNLENQLEER 110

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 914546577 1163 EAARRAIEVRRAELRKAEDARRIEAARRYENERRIEEARRYEDEKRIEAVKR 1214
Cdd:PRK12705  111 EKALSARELELEELEKQLDNELYRVAGLTPEQARKLLLKLLDAELEEEKAQR 162

Metal_resist

pfam13801

Heavy-metal resistance; This is a metal-binding protein which is involved in resistance to ...

1108-1189

2.09e-03

Heavy-metal resistance; This is a metal-binding protein which is involved in resistance to heavy-metal ions. The protein forms a four-helix hooked hairpin, consisting of two long alpha helices each flanked by a shorter alpha helix. It binds a metal ion in a type-2 like centre. It contains two copies of an LTXXQ motif.

Pssm-ID: 433488 [Multi-domain] Cd Length: 119 Bit Score: 39.97 E-value: 2.09e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1108 AEDARRIEEARRAEDARRIEEARRAEDARRveiarRVEDArrieISRRAEDAKRIEAARRAIEVRRAELRKAEDARRIEA 1187
Cdd:pfam13801   41 AEQRERLRAALRDHARELRALRRELRAARR-----ELAAL----LAAPPFDPAAIEAALAEARQARAALQAQIEEALLEF 111


                   ..
gi 914546577  1188 AR 1189
Cdd:pfam13801  112 AA 113

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

1084-1211

2.71e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 2.71e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1084 FEEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAEDARRIEEARRAE-DARRVEIArrvEDARRIEISRRAEDakRI 1162
Cdd:COG4913   701 LEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALlEERFAAAL---GDAVERELRENLEE--RI 775

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 914546577 1163 EAARRAIEVRRAELRKAedarRIEAARRYENERR-----IEEARRYEDE-KRIEA 1211
Cdd:COG4913   776 DALRARLNRAEEELERA----MRAFNREWPAETAdldadLESLPEYLALlDRLEE 826

SF-CC1

TIGR01622

splicing factor, CC1-like family; This model represents a subfamily of RNA splicing factors ...

1112-1221

2.74e-03

splicing factor, CC1-like family; This model represents a subfamily of RNA splicing factors including the Pad-1 protein (N. crassa), CAPER (M. musculus) and CC1.3 (H.sapiens). These proteins are characterized by an N-terminal arginine-rich, low complexity domain followed by three (or in the case of 4 H. sapiens paralogs, two) RNA recognition domains (rrm: pfam00706). These splicing factors are closely related to the U2AF splicing factor family (TIGR01642). A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the seed.

Pssm-ID: 273721 [Multi-domain] Cd Length: 494 Bit Score: 42.60 E-value: 2.74e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1112 RRIEEARRAEDARRIEEARRAEDARRvEIARRVEDARRIEISRRaEDAKRIEAARRAIEVRRAELRKAEDARRIEAARRY 1191
Cdd:TIGR01622    2 YRDRERERLRDSSSAGDRDRRRDKGR-ERSRDRSRDRERSRSRR-RDRHRDRDYYRGRERRSRSRRPNRRYRPREKRRRR 79

                           90       100       110
                   ....*....|....*....|....*....|.
gi 914546577  1192 ENERRIE-EARRYEDEKRIEAVKRAEEVRKD 1221
Cdd:TIGR01622   80 GDSYRRRrDDRRSRREKPRARDGTPEPLTED 110

AMA-1

smart00815

Apical membrane antigen 1; Apical membrane antigen 1 (AMA-1) is a Plasmodium asexual ...

803-906

3.00e-03

Pssm-ID: 214831 [Multi-domain] Cd Length: 239 Bit Score: 41.66 E-value: 3.00e-03

                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577    803 NLFDCSIYSYCLGPcleNSFGNKCFRnLPAYYNHLTNECVILGTHEQERTNS--CRRTKEEKKKPNCQILRKTTDSKDWT 880
Cdd:smart00815  101 DLSLCAEHASNTVP---GNNKNSKYR-YPFVYDSDDKLCYILYVAAQENQGPryCSNDEEGTSSLFCFKPDKSKEDHHLI 176

                            90       100
                    ....*....|....*....|....*.
gi 914546577    881 YVSSFIRPDYETKCpPRYPLKSKVFG 906
Cdd:smart00815  177 YGSANVGDDWEEVC-PNKPLRNAKFG 201

MAP7

pfam05672

MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ...

1145-1261

3.46e-03

Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 40.02 E-value: 3.46e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1145 EDARRIEISRRA---EDAKRIEAARRAIEvRRAELRKAEDARRI--EAARRYENERRIEEARR--YEDEKRIEAVKRAEE 1217
Cdd:pfam05672   10 EEAARILAEKRRqarEQREREEQERLEKE-EEERLRKEELRRRAeeERARREEEARRLEEERRreEEERQRKAEEEAEER 88

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 914546577  1218 VRKDEEEAKRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEKR 1261
Cdd:pfam05672   89 EQREQEEQERLQKQKEEAEAKAREEAERQRQEREKIMQQEEQER 132

rne

PRK10811

ribonuclease E; Reviewed

1096-1208

3.57e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 3.57e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1096 EEESKKKEAMKRAEDARRIEEA--RRAEDARRIEEARRAEDARRVeiARrvEDARRieisRRAEDAKRIEAARRAIEVRR 1173
Cdd:PRK10811  590 EQPAPKAEAKPERQQDRRKPRQnnRRDRNERRDTRDNRTRREGRE--NR--EENRR----NRRQAQQQTAETRESQQAEV 661

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 914546577 1174 AELRKAEDARRieaarryeNERRIEEARRYEDEKR 1208
Cdd:PRK10811  662 TEKARTQDEQQ--------QAPRRERQRRRNDEKR 688

ATP-synt_B

pfam00430

ATP synthase B/B' CF(0); Part of the CF(0) (base unit) of the ATP synthase. The base unit is ...

1096-1190

4.76e-03

ATP synthase B/B' CF(0); Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria, thylakoid membrane in plants, cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006

Pssm-ID: 425677 [Multi-domain] Cd Length: 132 Bit Score: 39.22 E-value: 4.76e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1096 EEESKKKEAMKRAEDAR-RIEEARrAEDARRIEEAR-RAEDARRVEIARRVEDARRIEISRRAEdakrIEAAR-RAievr 1172
Cdd:pfam00430   41 EAEERRKDAAAALAEAEqQLKEAR-AEAQEIIENAKkRAEKLKEEIVAAAEAEAERIIEQAAAE----IEQEKdRA---- 111

                           90
                   ....*....|....*...
gi 914546577  1173 RAELRKAEDARRIEAARR 1190
Cdd:pfam00430  112 LAELRQQVVALAVQIAEK 129

NtpH

COG2811

Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]; Archaeal ...

1094-1212

4.82e-03

Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]; Archaeal/vacuolar-type H+-ATPase subunit H is part of the Pathway/BioSystem: A/V-type ATP synthase

Pssm-ID: 442060 [Multi-domain] Cd Length: 108 Bit Score: 38.74 E-value: 4.82e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1094 RIEEESKKKEAMKRAEDarRIEEARRaEDARRIEEArraedarRVEIARRVEDARRiEISRRAEdaKRIEAARRAIEVRR 1173
Cdd:COG2811     3 RPEVLKEIKEAEEEADE--IIEEAKE-EREERIAEA-------REEAEEIIEQAEE-EAEEEAQ--ERLEEAREEAEAEA 69

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 914546577 1174 AELRKAEDARRIEAARRYENerRIEEARRYEDEKRIEAV 1212
Cdd:COG2811    70 EEIIEEGEKEAEALKKKAED--KLDKAVELLVEEFEEAV 106

TPH

pfam13868

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...

1096-1263

5.33e-03

Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 41.44 E-value: 5.33e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1096 EEESKKKEAMKRAEDARR-IEEARRaedARRIEEARRAEDARRV-EIARRVEDARRIEISRRAE-------DAKRIEAAR 1166
Cdd:pfam13868   63 KEEERKEERKRYRQELEEqIEEREQ---KRQEEYEEKLQEREQMdEIVERIQEEDQAEAEEKLEkqrqlreEIDEFNEEQ 139

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1167 RAIEVRRAELRKAEDARRIEAAR----RYENERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEE 1242
Cdd:pfam13868  140 AEWKELEKEEEREEDERILEYLKekaeREEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLYQEEQERKE 219

                          170       180
                   ....*....|....*....|.
gi 914546577  1243 ARmahfARRQAAIKAEEKRKA 1263
Cdd:pfam13868  220 RQ----KEREEAEKKARQRQE 236

CAF-1_p150

pfam11600

Chromatin assembly factor 1 complex p150 subunit, N-terminal; CAF-1_p150 is a polypeptide ...

1043-1178

6.10e-03

Chromatin assembly factor 1 complex p150 subunit, N-terminal; CAF-1_p150 is a polypeptide subunit of CAF-1, which functions in depositing newly synthesized and acetylated histones H3/H4 into chromatin during DNA replication and repair. CAF-1_p150 includes the HP1 interaction site, the PEST, KER and ED interacting sites. CAF-1_p150 interacts directly with newly synthesized and acetylated histones through the acidic KER and ED domains. The PEST domain is associated with proteins that undergo rapid proteolysis.

Pssm-ID: 402959 [Multi-domain] Cd Length: 164 Bit Score: 39.67 E-value: 6.10e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1043 KINRKSHVNSMERNKPSYKENEYDQmEKNVEDETYSEEFGLFEEARKTETGRIEEESKKKEAMKRAEDARRIEEARRAED 1122
Cdd:pfam11600    1 RRSQKSVQSQEEKEKQRLEKDKERL-RRQLKLEAEKEEKERLKEEAKAEKERAKEEARRKKEEEKELKEKERREKKEKDE 79

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 914546577  1123 ARRIEEARRAEDARRVEIARRvedARRIEISRRAEDAKRIEAARRAIEVRRAELRK 1178
Cdd:pfam11600   80 KEKAEKLRLKEEKRKEKQEAL---EAKLEEKRKKEEEKRLKEEEKRIKAEKAEITR 132

GumC

COG3206

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

1062-1214

7.15e-03

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 7.15e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1062 ENEYDQMEKNVED-----ETYSEEFGLF--EEARKTETGRIEE-ESKKKEA-MKRAEDARRIEEARRAEDARRIEEARRA 1132
Cdd:COG3206   181 EEQLPELRKELEEaeaalEEFRQKNGLVdlSEEAKLLLQQLSElESQLAEArAELAEAEARLAALRAQLGSGPDALPELL 260

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577 1133 EDARRVEIARRVED--ARRIEISRR-AEDAKRIEAARRAIEVRRAELRKAEDARRIEAarryENERRIEEARRYEDEKRI 1209
Cdd:COG3206   261 QSPVIQQLRAQLAEleAELAELSARyTPNHPDVIALRAQIAALRAQLQQEAQRILASL----EAELEALQAREASLQAQL 336


                  ....*
gi 914546577 1210 EAVKR 1214
Cdd:COG3206   337 AQLEA 341

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

1041-1254

8.98e-03

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.20 E-value: 8.98e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1041 ETKINR-KSHVNSMERNKPSYKENEYD----QMEKNVEDETYSEEFGLFEEARKTETGRIEEESKKKEAMKRAEDARRIE 1115
Cdd:TIGR02168  266 EEKLEElRLEVSELEEEIEELQKELYAlaneISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEK 345

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914546577  1116 EARRAEDARRIEEARRAEDARRVEIARRVEDARR-IEISRRAEDAKRIEAARRAIEVRRAELRK--AEDARRIEAARRYE 1192
Cdd:TIGR02168  346 LEELKEELESLEAELEELEAELEELESRLEELEEqLETLRSKVAQLELQIASLNNEIERLEARLerLEDRRERLQQEIEE 425

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 914546577  1193 NERRIEEARRYEDEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEEARMAhfARRQAA 1254
Cdd:TIGR02168  426 LLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDA--AERELA 485

tolA