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Conserved domains on  [gi|914339633|gb|AKV60496|]
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VP1 [Bluetongue virus 3]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Orbi_VP1 super family cl12314
Orbivirus RNA-dependent RNA polymerase (VP1); This family consists of the RNA-dependent RNA ...
 1-1297 0e+00

Orbivirus RNA-dependent RNA polymerase (VP1); This family consists of the RNA-dependent RNA polymerase protein VP1 from the Orbiviruses. VP1 may have both enzymatic and structural roles in the virus life cycle.


The actual alignment was detected with superfamily member pfam05788:

Pssm-ID: 461740  Cd Length: 1297  Bit Score: 2112.07  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633     1 MVAITVQGAQLIKRVVERFYPGIAFNINEGACYIYKFSDHIRRIRMKHGTKYRRQAEEIIRNVSLRKERLYGIPVLDEVE 80
Cdd:pfam05788    1 MVAITVQGAQLIKRVVERFYPGIAFAINEGACYIYKFSDHIRRIRMKHGTKYRRQAEEILRKISLRKERLYGIPVLDEVE 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633    81 WKYVFDGQTFQSYAFEVYVNSILPWSELDPEEEFLRNYRVSREMTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSAE 160
Cdd:pfam05788   81 WKYVFDGQTFQSYAFEVYVNSILPWSELDPEEEFLRNYRVSREKTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSIE 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   161 LKHIPLGMQVMADFVNRFDSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRMREEDISALEFGDMKVDPV 240
Cdd:pfam05788  161 LGMQPLGMQVMADFVNRFQSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRMREEEISALEFGDVKLDPV 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   241 GLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVVLQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESR 320
Cdd:pfam05788  241 GLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVVLQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESR 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   321 RMNEEKILEAVKYSQKLGSHDRRLPLFEKMLKTVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLKP 400
Cdd:pfam05788  321 RMNEEKILEAVKYSQDLGSHDRRLPLFEKMLKPVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLKP 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   401 NPSNLVQDVSDLTREFFKQAYVEAKERREEIVKPEDLYTSMLRLARNTSSGFSTEIYVKKRFGPRLRDKDLIKINSRIKA 480
Cdd:pfam05788  401 NPSNLVLDVSDLTREFFKQAYVEAKERREEDVKPEDLYTSMLRLARNTSSGFSTEIYVKKRFGPRLRDKDLRKINSRIKA 480

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   481 LVIFTKGHTVFTDEELHKKYNSVELYQTKGSRDVPIKATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITSPDYKKIGG 560
Cdd:pfam05788  481 LVIFTKGHTVFTDEELHKKYNSVELYQTKGSRDVPIKATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITKPDYKKIGG 560

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   561 KVIVGDLEATGSRVMDAADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRDLRYEGYTLEQIIDFG 640
Cdd:pfam05788  561 KVIVGDLEATGSRVMDAADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRGLRYEGYTLEQIIDFG 640

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   641 YGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVANRIAVDKGFDTLIAATDGSDLALIDTH 720
Cdd:pfam05788  641 YGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVANRIAVDKGFDTLIAATDGSDLALIDTH 720

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   721 LSGENSTLIANSMHNMAIGTLIQREVGREQPGILTFLSEQYVGDDTLFYTKLHTTDTRVFDKVAASIFDTVAKCGHEASP 800
Cdd:pfam05788  721 LSGENSTLIANSMHNMAIGTLGQRQVGREQPGSLTFLSEQYVGDDTLFYTKLHTTDKVVFDKVAASIFDTVAKCGHEASP 800

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   801 SKTMMTPYSVEKTQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILMLKTTFIGAW 880
Cdd:pfam05788  801 SKTMMTPYSVEKTQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILMLKTTFIGAW 880

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   881 KMKRTIKEDAMYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPAALNIVMTEEMYVDSIMISKLDEIMAPIRRI 960
Cdd:pfam05788  881 KMKRTIKEDAMYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPAALNIVMTEEMYVDSIMISKLDEIMAPIRRI 960

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   961 VHDIPPCWNETQGDKRGLISATKMSFFSKMARPAVQAALSDPQIMNLVEELPLGEFSPGRISRTMMHSALLKESSARTLL 1040
Cdd:pfam05788  961 VHDIPPCWNETQGDKRGLISATKKSFFSKMARPAVQAALSDPQIENLVEELPLGEFSPGRISRTMMHSALLKESSASGLL 1040

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1041 SSGYELEYQKALNSWIAQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPYMFPDQNLSPQFYIQKMIIGPRVSSRVRNS 1120
Cdd:pfam05788 1041 SSGYKLEYQKALNVWIRQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPQMFPDQNLSPQFYIQKMMIGPRVSSRVRNS 1120

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1121 YVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTLMNIETRVAEELAEYMTSEKIRFDALKLLKKGIAG 1200
Cdd:pfam05788 1121 YVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTLMNIETRVAEELAEYMTSEKIRFDALKLLKKGIAG 1200

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1201 DEFTMSLNVATQDFIDTYLAYPYQLTKTEVDAISLYCTQMVMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKI 1280
Cdd:pfam05788 1201 DEFTMSLNVATQDFIDTYLAYPYQLTKTEVDAISLYCTQMAMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKI 1280

                         1290
                   ....*....|....*..
gi 914339633  1281 KVLKKLIDPNRMTVRNL 1297
Cdd:pfam05788 1281 KVLKKLIDPNRMTVRNL 1297
 
Name Accession Description Interval E-value
Orbi_VP1 pfam05788
Orbivirus RNA-dependent RNA polymerase (VP1); This family consists of the RNA-dependent RNA ...
 1-1297 0e+00

Orbivirus RNA-dependent RNA polymerase (VP1); This family consists of the RNA-dependent RNA polymerase protein VP1 from the Orbiviruses. VP1 may have both enzymatic and structural roles in the virus life cycle.


Pssm-ID: 461740  Cd Length: 1297  Bit Score: 2112.07  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633     1 MVAITVQGAQLIKRVVERFYPGIAFNINEGACYIYKFSDHIRRIRMKHGTKYRRQAEEIIRNVSLRKERLYGIPVLDEVE 80
Cdd:pfam05788    1 MVAITVQGAQLIKRVVERFYPGIAFAINEGACYIYKFSDHIRRIRMKHGTKYRRQAEEILRKISLRKERLYGIPVLDEVE 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633    81 WKYVFDGQTFQSYAFEVYVNSILPWSELDPEEEFLRNYRVSREMTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSAE 160
Cdd:pfam05788   81 WKYVFDGQTFQSYAFEVYVNSILPWSELDPEEEFLRNYRVSREKTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSIE 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   161 LKHIPLGMQVMADFVNRFDSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRMREEDISALEFGDMKVDPV 240
Cdd:pfam05788  161 LGMQPLGMQVMADFVNRFQSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRMREEEISALEFGDVKLDPV 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   241 GLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVVLQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESR 320
Cdd:pfam05788  241 GLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVVLQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESR 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   321 RMNEEKILEAVKYSQKLGSHDRRLPLFEKMLKTVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLKP 400
Cdd:pfam05788  321 RMNEEKILEAVKYSQDLGSHDRRLPLFEKMLKPVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLKP 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   401 NPSNLVQDVSDLTREFFKQAYVEAKERREEIVKPEDLYTSMLRLARNTSSGFSTEIYVKKRFGPRLRDKDLIKINSRIKA 480
Cdd:pfam05788  401 NPSNLVLDVSDLTREFFKQAYVEAKERREEDVKPEDLYTSMLRLARNTSSGFSTEIYVKKRFGPRLRDKDLRKINSRIKA 480

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   481 LVIFTKGHTVFTDEELHKKYNSVELYQTKGSRDVPIKATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITSPDYKKIGG 560
Cdd:pfam05788  481 LVIFTKGHTVFTDEELHKKYNSVELYQTKGSRDVPIKATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITKPDYKKIGG 560

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   561 KVIVGDLEATGSRVMDAADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRDLRYEGYTLEQIIDFG 640
Cdd:pfam05788  561 KVIVGDLEATGSRVMDAADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRGLRYEGYTLEQIIDFG 640

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   641 YGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVANRIAVDKGFDTLIAATDGSDLALIDTH 720
Cdd:pfam05788  641 YGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVANRIAVDKGFDTLIAATDGSDLALIDTH 720

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   721 LSGENSTLIANSMHNMAIGTLIQREVGREQPGILTFLSEQYVGDDTLFYTKLHTTDTRVFDKVAASIFDTVAKCGHEASP 800
Cdd:pfam05788  721 LSGENSTLIANSMHNMAIGTLGQRQVGREQPGSLTFLSEQYVGDDTLFYTKLHTTDKVVFDKVAASIFDTVAKCGHEASP 800

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   801 SKTMMTPYSVEKTQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILMLKTTFIGAW 880
Cdd:pfam05788  801 SKTMMTPYSVEKTQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILMLKTTFIGAW 880

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   881 KMKRTIKEDAMYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPAALNIVMTEEMYVDSIMISKLDEIMAPIRRI 960
Cdd:pfam05788  881 KMKRTIKEDAMYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPAALNIVMTEEMYVDSIMISKLDEIMAPIRRI 960

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   961 VHDIPPCWNETQGDKRGLISATKMSFFSKMARPAVQAALSDPQIMNLVEELPLGEFSPGRISRTMMHSALLKESSARTLL 1040
Cdd:pfam05788  961 VHDIPPCWNETQGDKRGLISATKKSFFSKMARPAVQAALSDPQIENLVEELPLGEFSPGRISRTMMHSALLKESSASGLL 1040

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1041 SSGYELEYQKALNSWIAQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPYMFPDQNLSPQFYIQKMIIGPRVSSRVRNS 1120
Cdd:pfam05788 1041 SSGYKLEYQKALNVWIRQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPQMFPDQNLSPQFYIQKMMIGPRVSSRVRNS 1120

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1121 YVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTLMNIETRVAEELAEYMTSEKIRFDALKLLKKGIAG 1200
Cdd:pfam05788 1121 YVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTLMNIETRVAEELAEYMTSEKIRFDALKLLKKGIAG 1200

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1201 DEFTMSLNVATQDFIDTYLAYPYQLTKTEVDAISLYCTQMVMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKI 1280
Cdd:pfam05788 1201 DEFTMSLNVATQDFIDTYLAYPYQLTKTEVDAISLYCTQMAMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKI 1280

                         1290
                   ....*....|....*..
gi 914339633  1281 KVLKKLIDPNRMTVRNL 1297
Cdd:pfam05788 1281 KVLKKLIDPNRMTVRNL 1297
 
Name Accession Description Interval E-value
Orbi_VP1 pfam05788
Orbivirus RNA-dependent RNA polymerase (VP1); This family consists of the RNA-dependent RNA ...
 1-1297 0e+00

Orbivirus RNA-dependent RNA polymerase (VP1); This family consists of the RNA-dependent RNA polymerase protein VP1 from the Orbiviruses. VP1 may have both enzymatic and structural roles in the virus life cycle.


Pssm-ID: 461740  Cd Length: 1297  Bit Score: 2112.07  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633     1 MVAITVQGAQLIKRVVERFYPGIAFNINEGACYIYKFSDHIRRIRMKHGTKYRRQAEEIIRNVSLRKERLYGIPVLDEVE 80
Cdd:pfam05788    1 MVAITVQGAQLIKRVVERFYPGIAFAINEGACYIYKFSDHIRRIRMKHGTKYRRQAEEILRKISLRKERLYGIPVLDEVE 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633    81 WKYVFDGQTFQSYAFEVYVNSILPWSELDPEEEFLRNYRVSREMTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSAE 160
Cdd:pfam05788   81 WKYVFDGQTFQSYAFEVYVNSILPWSELDPEEEFLRNYRVSREKTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSIE 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   161 LKHIPLGMQVMADFVNRFDSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRMREEDISALEFGDMKVDPV 240
Cdd:pfam05788  161 LGMQPLGMQVMADFVNRFQSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRMREEEISALEFGDVKLDPV 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   241 GLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVVLQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESR 320
Cdd:pfam05788  241 GLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVVLQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESR 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   321 RMNEEKILEAVKYSQKLGSHDRRLPLFEKMLKTVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLKP 400
Cdd:pfam05788  321 RMNEEKILEAVKYSQDLGSHDRRLPLFEKMLKPVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLKP 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   401 NPSNLVQDVSDLTREFFKQAYVEAKERREEIVKPEDLYTSMLRLARNTSSGFSTEIYVKKRFGPRLRDKDLIKINSRIKA 480
Cdd:pfam05788  401 NPSNLVLDVSDLTREFFKQAYVEAKERREEDVKPEDLYTSMLRLARNTSSGFSTEIYVKKRFGPRLRDKDLRKINSRIKA 480

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   481 LVIFTKGHTVFTDEELHKKYNSVELYQTKGSRDVPIKATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITSPDYKKIGG 560
Cdd:pfam05788  481 LVIFTKGHTVFTDEELHKKYNSVELYQTKGSRDVPIKATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITKPDYKKIGG 560

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   561 KVIVGDLEATGSRVMDAADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRDLRYEGYTLEQIIDFG 640
Cdd:pfam05788  561 KVIVGDLEATGSRVMDAADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRGLRYEGYTLEQIIDFG 640

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   641 YGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVANRIAVDKGFDTLIAATDGSDLALIDTH 720
Cdd:pfam05788  641 YGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVANRIAVDKGFDTLIAATDGSDLALIDTH 720

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   721 LSGENSTLIANSMHNMAIGTLIQREVGREQPGILTFLSEQYVGDDTLFYTKLHTTDTRVFDKVAASIFDTVAKCGHEASP 800
Cdd:pfam05788  721 LSGENSTLIANSMHNMAIGTLGQRQVGREQPGSLTFLSEQYVGDDTLFYTKLHTTDKVVFDKVAASIFDTVAKCGHEASP 800

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   801 SKTMMTPYSVEKTQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILMLKTTFIGAW 880
Cdd:pfam05788  801 SKTMMTPYSVEKTQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILMLKTTFIGAW 880

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   881 KMKRTIKEDAMYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPAALNIVMTEEMYVDSIMISKLDEIMAPIRRI 960
Cdd:pfam05788  881 KMKRTIKEDAMYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPAALNIVMTEEMYVDSIMISKLDEIMAPIRRI 960

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633   961 VHDIPPCWNETQGDKRGLISATKMSFFSKMARPAVQAALSDPQIMNLVEELPLGEFSPGRISRTMMHSALLKESSARTLL 1040
Cdd:pfam05788  961 VHDIPPCWNETQGDKRGLISATKKSFFSKMARPAVQAALSDPQIENLVEELPLGEFSPGRISRTMMHSALLKESSASGLL 1040

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1041 SSGYELEYQKALNSWIAQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPYMFPDQNLSPQFYIQKMIIGPRVSSRVRNS 1120
Cdd:pfam05788 1041 SSGYKLEYQKALNVWIRQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPQMFPDQNLSPQFYIQKMMIGPRVSSRVRNS 1120

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1121 YVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTLMNIETRVAEELAEYMTSEKIRFDALKLLKKGIAG 1200
Cdd:pfam05788 1121 YVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTLMNIETRVAEELAEYMTSEKIRFDALKLLKKGIAG 1200

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 914339633  1201 DEFTMSLNVATQDFIDTYLAYPYQLTKTEVDAISLYCTQMVMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKI 1280
Cdd:pfam05788 1201 DEFTMSLNVATQDFIDTYLAYPYQLTKTEVDAISLYCTQMAMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKI 1280

                         1290
                   ....*....|....*..
gi 914339633  1281 KVLKKLIDPNRMTVRNL 1297
Cdd:pfam05788 1281 KVLKKLIDPNRMTVRNL 1297
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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