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Conserved domains on  [gi|912285110|gb|AKU61308|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Lasiurus salinae]

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
1-197 1.20e-117

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00104:

Pssm-ID: 469782  Cd Length: 318  Bit Score: 336.60  E-value: 1.20e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAP 197
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-197 1.20e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 336.60  E-value: 1.20e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAP 197
NADHdh pfam00146
NADH dehydrogenase;
6-197 2.48e-70

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 215.80  E-value: 2.48e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110    6 LLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLALMM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   86 WTPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFTLT 163
Cdd:pfam00146  82 FAVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190
                  ....*....|....*....|....*....|....
gi 912285110  164 TLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAP 195
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-197 2.24e-61

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 193.81  E-value: 2.24e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   6 LLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLALMM 85
Cdd:COG1005   15 ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  86 WTPLPM--PHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFTLT 163
Cdd:COG1005   95 FAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLS 174

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 912285110 164 TLIITQE-YIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:COG1005  175 EIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAP 209
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-197 1.20e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 336.60  E-value: 1.20e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAP 197
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-197 1.33e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 321.46  E-value: 1.33e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00111   6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00111  86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGY 165

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00111 166 TLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAP 202
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-197 2.14e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 308.09  E-value: 2.14e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00071   6 SLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALT 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00071  86 LALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGF 165

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00071 166 SLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAP 202
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-197 5.49e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 304.61  E-value: 5.49e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00134   7 THIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALT 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00134  87 LALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGF 166

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00134 167 TLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAP 203
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 2-197 1.77e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 269.86  E-value: 1.77e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   2 YFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALML 81
Cdd:MTH00218   4 SLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  82 ALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFT 161
Cdd:MTH00218  84 ALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFS 163

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 912285110 162 LTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00218 164 LEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAP 199
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-197 7.86e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 268.77  E-value: 7.86e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00040   5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00040  85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00040 165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAP 201
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-197 8.71e-77

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 232.35  E-value: 8.71e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00193  83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00193 163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTP 199
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-197 4.89e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 222.82  E-value: 4.89e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00143   2 VSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00143  82 LALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSF 161

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00143 162 SFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAP 198
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 7-197 3.53e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 218.07  E-value: 3.53e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   7 LATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLALMMW 86
Cdd:MTH00195   9 LIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILW 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  87 TPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFTLTTLI 166
Cdd:MTH00195  89 VPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMV 168

                        170       180       190
                 ....*....|....*....|....*....|.
gi 912285110 167 ITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00195 169 ISQGFSWVILLCPPISFMWYVSTLAETNRAP 199
NADHdh pfam00146
NADH dehydrogenase;
6-197 2.48e-70

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 215.80  E-value: 2.48e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110    6 LLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLALMM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   86 WTPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFTLT 163
Cdd:pfam00146  82 FAVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190
                  ....*....|....*....|....*....|....
gi 912285110  164 TLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAP 195
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-197 6.98e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 212.20  E-value: 6.98e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 912285110 161 TLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAP 198
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-197 1.66e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 196.49  E-value: 1.66e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:MTH00054   3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPMPHP--LINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSG 158
Cdd:MTH00054  83 LAFIAWGVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 912285110 159 TFTLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00054 163 SLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVP 201
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-197 2.24e-61

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 193.81  E-value: 2.24e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   6 LLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLALMM 85
Cdd:COG1005   15 ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  86 WTPLPM--PHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFTLT 163
Cdd:COG1005   95 FAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLS 174

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 912285110 164 TLIITQE-YIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:COG1005  175 EIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAP 209
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-197 5.86e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 192.64  E-value: 5.86e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   2 YFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALML 81
Cdd:MTH00216   8 YLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTL 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  82 ALMMWTPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGT 159
Cdd:MTH00216  88 ALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGS 167

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 912285110 160 FTLTTLIITQ-EYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00216 168 LSITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAP 206
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-197 1.08e-59

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 189.25  E-value: 1.08e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   1 MYFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALM 80
Cdd:PRK06076  11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  81 LALMMWTPLPM--PHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSG 158
Cdd:PRK06076  91 PAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAG 170

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 912285110 159 TFTLTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:PRK06076 171 SLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHP 209
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-197 6.87e-54

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 174.20  E-value: 6.87e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   2 YFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALML 81
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  82 ALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFT 161
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 912285110 162 LTTLIITQeYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTP 199
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 4-197 1.23e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 166.73  E-value: 1.23e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   4 MNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLAL 83
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  84 MMWTPLPMPHP--LINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFT 161
Cdd:MTH00029  91 LAWAIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 912285110 162 LTTLIITQEYIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:MTH00029 171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAP 206
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 5-197 7.79e-36

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 126.55  E-value: 7.79e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   5 NLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLALM 84
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  85 MWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFTLTT 164
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                        170       180       190
                 ....*....|....*....|....*....|...
gi 912285110 165 LIITQEYIwlaipawpLMMMWFISTLAETNRAP 197
Cdd:MTH00090 161 SFSLSLFV--------IYLPFLIMIIAELNRAP 185
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-197 2.73e-30

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 113.89  E-value: 2.73e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   3 FMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALMLA 82
Cdd:CHL00032  30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  83 LMMWTPLPMPHPLI--NMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTF 160
Cdd:CHL00032 110 LLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSL 189

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 912285110 161 TLTTLIITQ-EYIWLAIPAW--PL-MMMWFISTLAETNRAP 197
Cdd:CHL00032 190 STVDIVEAQsKYGFWGWNLWrqPIgFIVFLISSLAECERLP 230
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 2-197 1.39e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 110.40  E-value: 1.39e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   2 YFMNLLATIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTTLFIIAPTLALML 81
Cdd:MTH00058   3 GLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  82 ALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFT 161
Cdd:MTH00058  83 VVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYS 162

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 912285110 162 LTTLIITQEYIWLAIPawPLMMMWFISTLAETNRAP 197
Cdd:MTH00058 163 LVDFYYSGWLSVLLFP--LIYILWLVCILCETNRTP 196
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
3-197 5.55e-15

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 71.37  E-value: 5.55e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110   3 FMNLLATIVPVLLAVA---FLTLLERKVLGYMQLRKGPnivgpyGLLQPIADAIKLFTKEPLQPLTSStTLFIIAPTLAL 79
Cdd:COG0650    1 MMLILLALLQLLLALLlapLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 912285110  80 --MLALMMWTPLPMPHPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMS 157
Cdd:COG0650   74 aaMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 912285110 158 GTFTLTTLIITQE---YIWLAIPAWPLMMMWFISTLAETNRAP 197
Cdd:COG0650  154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIP 196
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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