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Conserved domains on  [gi|902642673|gb|AKS04495|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Parasagitta elegans]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009625)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-105 9.50e-24

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 87.26  E-value: 9.50e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   1 MNNVAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSM 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 902642673  81 YQ-------VLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00203  81 QLsslslllAFLFLILLTLGLIYEWLQGGLEW 112
 
Name Accession Description Interval E-value
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-105 9.50e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 87.26  E-value: 9.50e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   1 MNNVAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSM 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 902642673  81 YQ-------VLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00203  81 QLsslslllAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
29-104 7.38e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 74.38  E-value: 7.38e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   29 KSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFP--------MIYSMYQVLSFLLIVLMGLVYEWAY 100
Cdd:pfam00507  11 RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwavsfrelGWFGFVEMLIFIAILLVGLVYAWKK 90


                  ....
gi 902642673  101 GGLQ 104
Cdd:pfam00507  91 GALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-105 2.85e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 73.62  E-value: 2.85e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   4 VAAYFLVAVSLSVV-LLLGCVFGFKlKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFP------- 75
Cdd:COG0838    8 ILIFLLVALGLALAmLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPwavvfre 86

                         90       100       110
                 ....*....|....*....|....*....|.
gi 902642673  76 -MIYSMYQVLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:COG0838   87 lGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-105 9.50e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 87.26  E-value: 9.50e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   1 MNNVAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSM 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 902642673  81 YQ-------VLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00203  81 QLsslslllAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-105 1.74e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 86.57  E-value: 1.74e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   1 MNNVAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSM 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 902642673  81 YQV---------LSFLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00042  81 LITnpstllpisLIFLIILTIGLVYEWVNGGLEW 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-105 3.90e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 85.74  E-value: 3.90e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   1 MNNVAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPM---- 76
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwgd 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 902642673  77 -----IYSMYQVLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00136  81 qlpspLLTFFWATAVLILLTLGLIYEWLQGGLEW 114
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-106 4.13e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 85.68  E-value: 4.13e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   1 MNNVAAYFLVAVSLSVVLL-LGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYS 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLlLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 902642673  80 MYQVLS---------FLLIVLMGLVYEWAYGGLQWM 106
Cdd:MTH00148  81 LGSSFSvwsltslfiFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 28-105 3.41e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 83.45  E-value: 3.41e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  28 LKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSMYQ-------VLSFLLIVL--MGLVYEW 98
Cdd:MTH00106  27 LNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTnnlntmlTMALLLISLlaLSLAYEW 106


                 ....*..
gi 902642673  99 AYGGLQW 105
Cdd:MTH00106 107 TQKGLEW 113
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-105 4.02e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 83.12  E-value: 4.02e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   4 VAAYFLVAVSLSVVLLLgcvFGFKLKSYH---EKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFP----- 75
Cdd:MTH00069   2 IMLMLLISTILSLILIT---ISFWLPLNNpdsEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPtpwas 78

                         90       100       110
                 ....*....|....*....|....*....|....
gi 902642673  76 -MIYSMYQVL--SFLLIVL-MGLVYEWAYGGLQW 105
Cdd:MTH00069  79 qLNTPTNTLFwsTLILILLtLGLIYEWIQGGLEW 112
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-105 5.42e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 82.90  E-value: 5.42e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  15 SVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSM---------YQVLS 85
Cdd:MTH00161  14 IILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFktsnmmswlITSSF 93

                         90       100
                 ....*....|....*....|
gi 902642673  86 FLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00161  94 FILILLLGLYYEWNQGALEW 113
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 33-106 2.97e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 78.38  E-value: 2.97e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  33 EKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMI---------YSMYQVLSFLLIVLMGLVYEWAYGGL 103
Cdd:MTH00113  32 EKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPwainlttptTTLTWATIILTLLTLGLIYEWLQGGL 111


                 ...
gi 902642673 104 QWM 106
Cdd:MTH00113 112 EWA 114
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-105 6.15e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 77.98  E-value: 6.15e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   1 MNNVAAYFLVAVSLS-VVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMI-- 77
Cdd:MTH00012   1 MSLMMIPMMISLILPpLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPti 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 902642673  78 -------YSMYQVLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00012  81 lmtstskTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 15-107 3.04e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 75.80  E-value: 3.04e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  15 SVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMI---------YSMYQVLS 85
Cdd:MTH00202  16 SLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPlvlksswskGGLLGGTI 95

                         90       100
                 ....*....|....*....|..
gi 902642673  86 FLLIVLMGLVYEWAYGGLQWMV 107
Cdd:MTH00202  96 FLLILIGGLIHEWKEGSLDWVK 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
29-104 7.38e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 74.38  E-value: 7.38e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   29 KSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFP--------MIYSMYQVLSFLLIVLMGLVYEWAY 100
Cdd:pfam00507  11 RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwavsfrelGWFGFVEMLIFIAILLVGLVYAWKK 90


                  ....
gi 902642673  101 GGLQ 104
Cdd:pfam00507  91 GALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-105 2.85e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 73.62  E-value: 2.85e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   4 VAAYFLVAVSLSVV-LLLGCVFGFKlKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFP------- 75
Cdd:COG0838    8 ILIFLLVALGLALAmLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPwavvfre 86

                         90       100       110
                 ....*....|....*....|....*....|.
gi 902642673  76 -MIYSMYQVLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:COG0838   87 lGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-105 3.07e-16

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 68.35  E-value: 3.07e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   4 VAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSMYQV 83
Cdd:PRK06602  11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREI 90

                         90       100       110
                 ....*....|....*....|....*....|
gi 902642673  84 --------LSFLLIVLMGLVYEWAYGGLQW 105
Cdd:PRK06602  91 gwlgfveaMIFILVLLVGLVYLWRKGALDW 120
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 33-105 2.01e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 66.27  E-value: 2.01e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  33 EKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPM--------IYSMYQVLSFLLIVLMGLVYEWAYGGLQ 104
Cdd:MTH00055  37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWcvvynqigLFGFWVMYLFLIILTIGLIYEWVKGGLE 116


                 .
gi 902642673 105 W 105
Cdd:MTH00055 117 W 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 33-105 3.74e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 65.72  E-value: 3.74e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  33 EKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPM--------IYSMYQVLSFLLIVLMGLVYEWAYGGLQ 104
Cdd:MTH00030  42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWsivfnqlnLFSFWIVYTFLIVLAIGLAYEWIKGGLE 121


                 .
gi 902642673 105 W 105
Cdd:MTH00030 122 W 122
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 3-105 6.54e-14

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 62.39  E-value: 6.54e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   3 NVAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFP------- 75
Cdd:MTH00018   2 GLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPwcvlynq 81

                         90       100       110
                 ....*....|....*....|....*....|.
gi 902642673  76 -MIYSMYQVLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:MTH00018  82 iAPFGFWTMVGFLFILTLGLIYEWIKGGLEW 112
ndhC CHL00022
NADH dehydrogenase subunit 3
 33-105 9.11e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 51.53  E-value: 9.11e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  33 EKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPMIYSMYQ--------VLSFLLIVLMGLVYEWAYGGLQ 104
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVlgvsafieALIFVLILIVGLVYAWRKGALE 118


                 .
gi 902642673 105 W 105
Cdd:CHL00022 119 W 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
4-106 6.38e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 47.04  E-value: 6.38e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   4 VAAYFLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPM------- 76
Cdd:PRK07756  12 VLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWavaydkl 91

                         90       100       110
                 ....*....|....*....|....*....|.
gi 902642673  77 -IYSMYQVLSFLLIVLMGLVYEWAYGGLQWM 106
Cdd:PRK07756  92 gLFALIEMLIFVVMLLVGLAYAWKKKVLQWL 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 38-105 2.74e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 45.43  E-value: 2.74e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 902642673  38 FECGFDPSG--VSRVTFCMKFFMISIIFLVFDVEVTLVFPM--------IYSMYQVLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:PRK07928  41 YECGIEPTPqpAGGGRFPVKYYLTAMLFIVFDIEIVFLYPWavsfdalgVFGLVEMALFMLTVFVAYAYVWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-105 1.20e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.19  E-value: 1.20e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673  34 KGSPFECGFDPSGVSRvTFCMKFFMISIIFLVFDVEVTLVFPM--------IYSMYQVLSFLLIVLMGLVYEWAYGGLQW 105
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWavdfkllgLFGLIEMLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 8-107 5.16e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 39.11  E-value: 5.16e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 902642673   8 FLVAVSLSVVLLLGCVFGFKLKSYHEKGSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVT----LVFPMIYSMYQV 83
Cdd:MTH00092   8 FLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVmflgLLVSDFSSLISF 87

                         90       100
                 ....*....|....*....|....
gi 902642673  84 LSFLLIVLMGLVYEWAYGGLQWMV 107
Cdd:MTH00092  88 FMLMIFIFFGFYMEWWYGKLIWVI 111
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-107 8.86e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 33.33  E-value: 8.86e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 902642673  35 GSPFECGFDPSGVSRVTFCMKFFMISIIFLVFDVEVTLVFPM------IYSMYQVLSFLLIVLMGLVYEWAYGGLQWMV 107
Cdd:MTH00060  38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMpfqgllFYNFWYYYFFLLLLFLGFVVELFSGYVRWVY 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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