NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|898307661|ref|WP_049582115|]
View 

S9 family peptidase [Photorhabdus luminescens]

Protein Classification

S9 family peptidase( domain architecture ID 11448368)

peptidase S9 family protein, an oligopeptidase which may cleave the prolyl bond of short peptides, similar to oligopeptidase B, which cleaves on the C-terminal side of lysyl and argininyl residues

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PtrB COG1770
Protease II [Amino acid transport and metabolism];
1-672 0e+00

Protease II [Amino acid transport and metabolism];


:

Pssm-ID: 441376 [Multi-domain]  Cd Length: 686  Bit Score: 1168.69  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661   1 MPPKAMKQPHNITIHGDTRIDDYYWMRDdnRKDQKVIDYLTAENKYTEQMLKPGEPLRDTLYEEMVGRMKQDDQSVPYTY 80
Cdd:COG1770   10 TPPVAKKRPHTRTHHGDTRVDDYAWLRD--REDPEVLAYLEAENAYTEAVMAPTKPLQETLFAEMKGRIKEDDSSVPYRD 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  81 NGYIYRTIYETGKDFPIYQRKPVDGSsDWQVLVDGNERAKGHEYYQLSNFAVSLDNKRIAIAEDTQGRRNYQISFKDIAD 160
Cdd:COG1770   88 GGYWYYSRTEEGKQYPIYCRKPASGA-GEEVLLDGNALAEGHDFFSLGGLSVSPDGRLLAYSVDTVGSERYTLRIKDLET 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 161 KQWNNDVIKNTSGNMVWANDNNTLFYVRRHSqTLLPYQVFRHQYGSNTSEDQKIYQEDDERFYLSVSKSTSRDYIMLSIT 240
Cdd:COG1770  167 GEDLPDVIENTSGGLVWAADNRTLFYTRVDE-TLRPYQVWRHRLGTDPAEDVLVYEEKDERFFVGVGKTRSGRYIVIGSG 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 241 SNSTSEYLLIDANKPQAELQVFSPRQEGREYYIDHFRDHFYIRSNHENETYGLYQTETINT---PWKIVIAPQQDSDLED 317
Cdd:COG1770  246 STTTSEVRLLDADDPTAEPRLVAPREEGVEYSVEHAGDRFYILTNDDAPNFKLVRAPVDAPsreNWQELIPHRPGVLLEG 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 318 FDLFNDWLVVQERTKGLPTIRQVNWQTQQEKQIKFDDPSYMAWIDYNPEPNTDFVRYGYSSMTTPSSTFQWNMKTGEREL 397
Cdd:COG1770  326 VDAFKDHLVVSERENGLPRIRVRDLDDGEEHEIAFDEEAYTAGLGGNPEFDTDTLRYSYSSLTTPSSVYDYDLATGERTL 405
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 398 LKQQEV-KGFDKHHYESQRIWVKARDGVEVPVSLVYRKSLFEKGHNPILIYGYGAYGMSMDPSFSSPRLSLLDRGFVYAL 476
Cdd:COG1770  406 LKQQEVpGGFDPADYVSERLWATARDGTKVPVSLVYRKDTKLDGSAPLLLYGYGSYGISIDPSFSTSRLSLLDRGFVYAI 485
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 477 VHVRGGGELGKKWYLQGKVENKMNSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGAVINQAPELYRGVVAQVPFV 556
Cdd:COG1770  486 AHIRGGGELGRRWYEDGKLLKKKNTFTDFIACAEHLIAQGYTSPGRIVAMGGSAGGLLMGAVANMAPELFAGVIAQVPFV 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 557 DAVTTMLDPSIPLTVGEYEEWGNP-ENKEDYFRIKSYSPYDNIKHQRYPNLLVTSGFYDSQVQYWEPTKWVAKLRDMKKG 635
Cdd:COG1770  566 DVLTTMLDPSLPLTTGEWDEWGNPlNDKEAYDYMKSYSPYDNVKAQAYPAILVTTGLNDSRVQYWEPAKWVAKLRELKTD 645
                        650       660       670
                 ....*....|....*....|....*....|....*..
gi 898307661 636 DSVLLLETNMSAGHGGKSGRFNRLKDTALDYSFILML 672
Cdd:COG1770  646 DNPLLLKTNMDAGHGGASGRFDALKEVALEYAFLLDL 682
 
Name Accession Description Interval E-value
PtrB COG1770
Protease II [Amino acid transport and metabolism];
1-672 0e+00

Protease II [Amino acid transport and metabolism];


Pssm-ID: 441376 [Multi-domain]  Cd Length: 686  Bit Score: 1168.69  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661   1 MPPKAMKQPHNITIHGDTRIDDYYWMRDdnRKDQKVIDYLTAENKYTEQMLKPGEPLRDTLYEEMVGRMKQDDQSVPYTY 80
Cdd:COG1770   10 TPPVAKKRPHTRTHHGDTRVDDYAWLRD--REDPEVLAYLEAENAYTEAVMAPTKPLQETLFAEMKGRIKEDDSSVPYRD 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  81 NGYIYRTIYETGKDFPIYQRKPVDGSsDWQVLVDGNERAKGHEYYQLSNFAVSLDNKRIAIAEDTQGRRNYQISFKDIAD 160
Cdd:COG1770   88 GGYWYYSRTEEGKQYPIYCRKPASGA-GEEVLLDGNALAEGHDFFSLGGLSVSPDGRLLAYSVDTVGSERYTLRIKDLET 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 161 KQWNNDVIKNTSGNMVWANDNNTLFYVRRHSqTLLPYQVFRHQYGSNTSEDQKIYQEDDERFYLSVSKSTSRDYIMLSIT 240
Cdd:COG1770  167 GEDLPDVIENTSGGLVWAADNRTLFYTRVDE-TLRPYQVWRHRLGTDPAEDVLVYEEKDERFFVGVGKTRSGRYIVIGSG 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 241 SNSTSEYLLIDANKPQAELQVFSPRQEGREYYIDHFRDHFYIRSNHENETYGLYQTETINT---PWKIVIAPQQDSDLED 317
Cdd:COG1770  246 STTTSEVRLLDADDPTAEPRLVAPREEGVEYSVEHAGDRFYILTNDDAPNFKLVRAPVDAPsreNWQELIPHRPGVLLEG 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 318 FDLFNDWLVVQERTKGLPTIRQVNWQTQQEKQIKFDDPSYMAWIDYNPEPNTDFVRYGYSSMTTPSSTFQWNMKTGEREL 397
Cdd:COG1770  326 VDAFKDHLVVSERENGLPRIRVRDLDDGEEHEIAFDEEAYTAGLGGNPEFDTDTLRYSYSSLTTPSSVYDYDLATGERTL 405
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 398 LKQQEV-KGFDKHHYESQRIWVKARDGVEVPVSLVYRKSLFEKGHNPILIYGYGAYGMSMDPSFSSPRLSLLDRGFVYAL 476
Cdd:COG1770  406 LKQQEVpGGFDPADYVSERLWATARDGTKVPVSLVYRKDTKLDGSAPLLLYGYGSYGISIDPSFSTSRLSLLDRGFVYAI 485
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 477 VHVRGGGELGKKWYLQGKVENKMNSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGAVINQAPELYRGVVAQVPFV 556
Cdd:COG1770  486 AHIRGGGELGRRWYEDGKLLKKKNTFTDFIACAEHLIAQGYTSPGRIVAMGGSAGGLLMGAVANMAPELFAGVIAQVPFV 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 557 DAVTTMLDPSIPLTVGEYEEWGNP-ENKEDYFRIKSYSPYDNIKHQRYPNLLVTSGFYDSQVQYWEPTKWVAKLRDMKKG 635
Cdd:COG1770  566 DVLTTMLDPSLPLTTGEWDEWGNPlNDKEAYDYMKSYSPYDNVKAQAYPAILVTTGLNDSRVQYWEPAKWVAKLRELKTD 645
                        650       660       670
                 ....*....|....*....|....*....|....*..
gi 898307661 636 DSVLLLETNMSAGHGGKSGRFNRLKDTALDYSFILML 672
Cdd:COG1770  646 DNPLLLKTNMDAGHGGASGRFDALKEVALEYAFLLDL 682
PRK10115 PRK10115
protease 2; Provisional
1-672 0e+00

protease 2; Provisional


Pssm-ID: 182247 [Multi-domain]  Cd Length: 686  Bit Score: 867.28  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661   1 MPPKAMKQPHNITIHGDTRIDDYYWMRDDNRKDQKVIDYLTAENKYTEQMLKPGEPLRDTLYEEMVGRMKQDDQSVPYTY 80
Cdd:PRK10115   1 MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  81 NGYIYRTIYETGKDFPIYQRKPV--DGSSDWQVLVDGNERAKGHEYYQLSNFAVSLDNKRIAIAEDTQGRRNYQISFKDI 158
Cdd:PRK10115  81 NGYRYRHIYEPGCEYAIYQRQSAfsEEWDEWETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 159 ADKQWNNDVIKNTSGNMVWANDNNTLFYVRRHSQTLLPYQVFRHQYGSNTSEDQKIYQEDDERFYLSVSKSTSRDYIMLS 238
Cdd:PRK10115 161 ETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIH 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 239 ITSNSTSEYLLIDANKPQAELQVFSPRQEGREYYIDHFRDHFYIRSNHENETYGLYQTETIN-TPWKIVIAPQQDSDLED 317
Cdd:PRK10115 241 LASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRDeQQWEELIPPRENIMLEG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 318 FDLFNDWLVVQERTKGLPTIRQVNWQTQQEKQIKFDDPSYMAWIDYNPEPNTDFVRYGYSSMTTPSSTFQWNMKTGEREL 397
Cdd:PRK10115 321 FTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRV 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 398 LKQQEVKGFDKHHYESQRIWVKARDGVEVPVSLVYRKSLFEKGHNPILIYGYGAYGMSMDPSFSSPRLSLLDRGFVYALV 477
Cdd:PRK10115 401 LKQTEVPGFDAANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIV 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 478 HVRGGGELGKKWYLQGKVENKMNSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGAVINQAPELYRGVVAQVPFVD 557
Cdd:PRK10115 481 HVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 558 AVTTMLDPSIPLTVGEYEEWGNPENKEDYFRIKSYSPYDNIKHQRYPNLLVTSGFYDSQVQYWEPTKWVAKLRDMKKGDS 637
Cdd:PRK10115 561 VVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDH 640
                        650       660       670
                 ....*....|....*....|....*....|....*
gi 898307661 638 VLLLETNMSAGHGGKSGRFNRLKDTALDYSFILML 672
Cdd:PRK10115 641 LLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIAL 675
Peptidase_S9_N pfam02897
Prolyl oligopeptidase, N-terminal beta-propeller domain; This unusual 7-stranded ...
2-401 3.63e-105

Prolyl oligopeptidase, N-terminal beta-propeller domain; This unusual 7-stranded beta-propeller domain protects the catalytic triad of prolyl oligopeptidase (see pfam00326), excluding larger peptides and proteins from proteolysis in the cytosol.


Pssm-ID: 397164 [Multi-domain]  Cd Length: 414  Bit Score: 326.19  E-value: 3.63e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661    2 PPKAMKQPHNITIHGDTRIDDYYWMRDDNRKDqkVIDYLTAENKYTEQMLKPGEPLRDTLYEEMVGRMKQDDQSVPYTYN 81
Cdd:pfam02897   1 PPTARDEHAVDEYHGDVVSDPYRWLEDDDSPE--TEAWVEAENKYTEDFLAQLPRLREKIKEELTALINYDDISAPFRKG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661   82 GYIYRTIYETGKDFPIYQRKPVDGSS--DWQVLVDGNERAKGHEYYQLSNFAVSLDNKRIAIAEDTQGRRNYQISFKDIA 159
Cdd:pfam02897  79 GYYYYFRNDGGKNQSVLYRQDALPGEgkPEEVFLDPNTLSEDGTFTALGGFAFSPDGRLLAYSLSLSGSDWYTIRFRDVE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  160 DKQWNNDVIKNTSG-NMVWANDNNTLFYVRRHSQTLLPY-------QVFRHQYGSNTSEDQKIYQEDDER-FYLSVSKST 230
Cdd:pfam02897 159 TGEDLPDVLEGVKFsGIVWAPDGKGFFYTRYDKPDERSDtgtnlnqKVWRHRLGTPQSQDVLVFEFPKDPlWSLGAERSE 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  231 SRDYIMLSI-TSNSTSEYLLIDANKPQAE-LQVFSPRQEGREYYIDHFRDHFYIRSNHENETYGLYQTeTINTP----WK 304
Cdd:pfam02897 239 DGKYLFISSaSGTDTNELYYLDLTKETGDtLKLVDGRFDGEYDVEHNEGDRFYFLTNDGAPNFRLVRV-DLNDPspseWK 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  305 IVIAPQQDSDLEDFDLFNDWLVVQERTKGLPTIRQVNWQTQQEKQIKFDDPSYMAWIDYNPEPNTDFVRYGYSSMTTPSS 384
Cdd:pfam02897 318 DLVPEREDVVLEEITVFGNYLVLSYRRDALSRLQVFDLKTGKVLSREFPLPGVGSVSGFSGEYDDSELRYSFSSFLTPGT 397
                         410
                  ....*....|....*..
gi 898307661  385 TFQWNMKTGERELLKQQ 401
Cdd:pfam02897 398 IYDLDLATGELELLKFR 414
 
Name Accession Description Interval E-value
PtrB COG1770
Protease II [Amino acid transport and metabolism];
1-672 0e+00

Protease II [Amino acid transport and metabolism];


Pssm-ID: 441376 [Multi-domain]  Cd Length: 686  Bit Score: 1168.69  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661   1 MPPKAMKQPHNITIHGDTRIDDYYWMRDdnRKDQKVIDYLTAENKYTEQMLKPGEPLRDTLYEEMVGRMKQDDQSVPYTY 80
Cdd:COG1770   10 TPPVAKKRPHTRTHHGDTRVDDYAWLRD--REDPEVLAYLEAENAYTEAVMAPTKPLQETLFAEMKGRIKEDDSSVPYRD 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  81 NGYIYRTIYETGKDFPIYQRKPVDGSsDWQVLVDGNERAKGHEYYQLSNFAVSLDNKRIAIAEDTQGRRNYQISFKDIAD 160
Cdd:COG1770   88 GGYWYYSRTEEGKQYPIYCRKPASGA-GEEVLLDGNALAEGHDFFSLGGLSVSPDGRLLAYSVDTVGSERYTLRIKDLET 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 161 KQWNNDVIKNTSGNMVWANDNNTLFYVRRHSqTLLPYQVFRHQYGSNTSEDQKIYQEDDERFYLSVSKSTSRDYIMLSIT 240
Cdd:COG1770  167 GEDLPDVIENTSGGLVWAADNRTLFYTRVDE-TLRPYQVWRHRLGTDPAEDVLVYEEKDERFFVGVGKTRSGRYIVIGSG 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 241 SNSTSEYLLIDANKPQAELQVFSPRQEGREYYIDHFRDHFYIRSNHENETYGLYQTETINT---PWKIVIAPQQDSDLED 317
Cdd:COG1770  246 STTTSEVRLLDADDPTAEPRLVAPREEGVEYSVEHAGDRFYILTNDDAPNFKLVRAPVDAPsreNWQELIPHRPGVLLEG 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 318 FDLFNDWLVVQERTKGLPTIRQVNWQTQQEKQIKFDDPSYMAWIDYNPEPNTDFVRYGYSSMTTPSSTFQWNMKTGEREL 397
Cdd:COG1770  326 VDAFKDHLVVSERENGLPRIRVRDLDDGEEHEIAFDEEAYTAGLGGNPEFDTDTLRYSYSSLTTPSSVYDYDLATGERTL 405
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 398 LKQQEV-KGFDKHHYESQRIWVKARDGVEVPVSLVYRKSLFEKGHNPILIYGYGAYGMSMDPSFSSPRLSLLDRGFVYAL 476
Cdd:COG1770  406 LKQQEVpGGFDPADYVSERLWATARDGTKVPVSLVYRKDTKLDGSAPLLLYGYGSYGISIDPSFSTSRLSLLDRGFVYAI 485
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 477 VHVRGGGELGKKWYLQGKVENKMNSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGAVINQAPELYRGVVAQVPFV 556
Cdd:COG1770  486 AHIRGGGELGRRWYEDGKLLKKKNTFTDFIACAEHLIAQGYTSPGRIVAMGGSAGGLLMGAVANMAPELFAGVIAQVPFV 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 557 DAVTTMLDPSIPLTVGEYEEWGNP-ENKEDYFRIKSYSPYDNIKHQRYPNLLVTSGFYDSQVQYWEPTKWVAKLRDMKKG 635
Cdd:COG1770  566 DVLTTMLDPSLPLTTGEWDEWGNPlNDKEAYDYMKSYSPYDNVKAQAYPAILVTTGLNDSRVQYWEPAKWVAKLRELKTD 645
                        650       660       670
                 ....*....|....*....|....*....|....*..
gi 898307661 636 DSVLLLETNMSAGHGGKSGRFNRLKDTALDYSFILML 672
Cdd:COG1770  646 DNPLLLKTNMDAGHGGASGRFDALKEVALEYAFLLDL 682
PRK10115 PRK10115
protease 2; Provisional
1-672 0e+00

protease 2; Provisional


Pssm-ID: 182247 [Multi-domain]  Cd Length: 686  Bit Score: 867.28  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661   1 MPPKAMKQPHNITIHGDTRIDDYYWMRDDNRKDQKVIDYLTAENKYTEQMLKPGEPLRDTLYEEMVGRMKQDDQSVPYTY 80
Cdd:PRK10115   1 MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  81 NGYIYRTIYETGKDFPIYQRKPV--DGSSDWQVLVDGNERAKGHEYYQLSNFAVSLDNKRIAIAEDTQGRRNYQISFKDI 158
Cdd:PRK10115  81 NGYRYRHIYEPGCEYAIYQRQSAfsEEWDEWETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 159 ADKQWNNDVIKNTSGNMVWANDNNTLFYVRRHSQTLLPYQVFRHQYGSNTSEDQKIYQEDDERFYLSVSKSTSRDYIMLS 238
Cdd:PRK10115 161 ETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIH 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 239 ITSNSTSEYLLIDANKPQAELQVFSPRQEGREYYIDHFRDHFYIRSNHENETYGLYQTETIN-TPWKIVIAPQQDSDLED 317
Cdd:PRK10115 241 LASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRDeQQWEELIPPRENIMLEG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 318 FDLFNDWLVVQERTKGLPTIRQVNWQTQQEKQIKFDDPSYMAWIDYNPEPNTDFVRYGYSSMTTPSSTFQWNMKTGEREL 397
Cdd:PRK10115 321 FTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRV 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 398 LKQQEVKGFDKHHYESQRIWVKARDGVEVPVSLVYRKSLFEKGHNPILIYGYGAYGMSMDPSFSSPRLSLLDRGFVYALV 477
Cdd:PRK10115 401 LKQTEVPGFDAANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIV 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 478 HVRGGGELGKKWYLQGKVENKMNSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGAVINQAPELYRGVVAQVPFVD 557
Cdd:PRK10115 481 HVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 558 AVTTMLDPSIPLTVGEYEEWGNPENKEDYFRIKSYSPYDNIKHQRYPNLLVTSGFYDSQVQYWEPTKWVAKLRDMKKGDS 637
Cdd:PRK10115 561 VVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDH 640
                        650       660       670
                 ....*....|....*....|....*....|....*
gi 898307661 638 VLLLETNMSAGHGGKSGRFNRLKDTALDYSFILML 672
Cdd:PRK10115 641 LLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIAL 675
Peptidase_S9_N pfam02897
Prolyl oligopeptidase, N-terminal beta-propeller domain; This unusual 7-stranded ...
2-401 3.63e-105

Prolyl oligopeptidase, N-terminal beta-propeller domain; This unusual 7-stranded beta-propeller domain protects the catalytic triad of prolyl oligopeptidase (see pfam00326), excluding larger peptides and proteins from proteolysis in the cytosol.


Pssm-ID: 397164 [Multi-domain]  Cd Length: 414  Bit Score: 326.19  E-value: 3.63e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661    2 PPKAMKQPHNITIHGDTRIDDYYWMRDDNRKDqkVIDYLTAENKYTEQMLKPGEPLRDTLYEEMVGRMKQDDQSVPYTYN 81
Cdd:pfam02897   1 PPTARDEHAVDEYHGDVVSDPYRWLEDDDSPE--TEAWVEAENKYTEDFLAQLPRLREKIKEELTALINYDDISAPFRKG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661   82 GYIYRTIYETGKDFPIYQRKPVDGSS--DWQVLVDGNERAKGHEYYQLSNFAVSLDNKRIAIAEDTQGRRNYQISFKDIA 159
Cdd:pfam02897  79 GYYYYFRNDGGKNQSVLYRQDALPGEgkPEEVFLDPNTLSEDGTFTALGGFAFSPDGRLLAYSLSLSGSDWYTIRFRDVE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  160 DKQWNNDVIKNTSG-NMVWANDNNTLFYVRRHSQTLLPY-------QVFRHQYGSNTSEDQKIYQEDDER-FYLSVSKST 230
Cdd:pfam02897 159 TGEDLPDVLEGVKFsGIVWAPDGKGFFYTRYDKPDERSDtgtnlnqKVWRHRLGTPQSQDVLVFEFPKDPlWSLGAERSE 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  231 SRDYIMLSI-TSNSTSEYLLIDANKPQAE-LQVFSPRQEGREYYIDHFRDHFYIRSNHENETYGLYQTeTINTP----WK 304
Cdd:pfam02897 239 DGKYLFISSaSGTDTNELYYLDLTKETGDtLKLVDGRFDGEYDVEHNEGDRFYFLTNDGAPNFRLVRV-DLNDPspseWK 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  305 IVIAPQQDSDLEDFDLFNDWLVVQERTKGLPTIRQVNWQTQQEKQIKFDDPSYMAWIDYNPEPNTDFVRYGYSSMTTPSS 384
Cdd:pfam02897 318 DLVPEREDVVLEEITVFGNYLVLSYRRDALSRLQVFDLKTGKVLSREFPLPGVGSVSGFSGEYDDSELRYSFSSFLTPGT 397
                         410
                  ....*....|....*..
gi 898307661  385 TFQWNMKTGERELLKQQ 401
Cdd:pfam02897 398 IYDLDLATGELELLKFR 414
PreP COG1505
Prolyl endopeptidase PreP, S9A serine peptidase family [Amino acid transport and metabolism];
17-651 8.64e-103

Prolyl endopeptidase PreP, S9A serine peptidase family [Amino acid transport and metabolism];


Pssm-ID: 441114 [Multi-domain]  Cd Length: 673  Bit Score: 328.24  E-value: 8.64e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  17 DTRIDDYY-WMRDDNrkDQKVIDYLTAENKYTEQMLKpGEPLRDTLYEEMVGRMKQDDQSVPYTYNGYIYRtiYETGKDF 95
Cdd:COG1505   17 TTAVADPYrWLEDDD--SPETLAWVKAQNAVTRAYLA-AIPRREALRARLLELLNYDRIPAPFKRGGRYYN--FWNDGLQ 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  96 P---IYQRKPVDGssDWQVLVDGNERAKGHEYYqLSNFAVSLDNKRIAiaedtqgrrnYQIS----------FKDIADKQ 162
Cdd:COG1505   92 NqgvLRVRDGLDP--EWEVLLDPNALSEDGTWV-LGAWSLSPDGRRLA----------YSLSeggsdarvvrVFDVATGE 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 163 WNNDVIKNTS-GNMVWANdnNTLFYVRRH-------SQTLLPYQVFRHQYGSNTSEDQKIYQ--EDDERFYLSVSKSTSR 232
Cdd:COG1505  159 FVEDGFEWEKkSGVAWLD--GTGFVYSRYgepegslTDSGYPRKVYYHRRGTPQSEDELVFEgpPDDPERYVGVSVSEDG 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 233 DYIMLSItSNSTSEYLLIDANKPQAEL-QVFSPrqEGREYYIDHFRDHFYIRSNHENETYGLYQTEtINTP----WKIVI 307
Cdd:COG1505  237 RYLLISR-ALGFYRNELYLLDLPDGELvPLDLP--FDADYSGVVNGGWLYLLTRLDAPRGRLVAID-LAAPgprnWTEFI 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 308 aPQQDSDLEDFDLFNDWLVVqERTKGLPT-IRQVNWQTQQEKQIKFDDPSYMAWIDYNPEpnTDFVRYGYSSMTTPSSTF 386
Cdd:COG1505  313 -PEAEAVLEGVSWTGGRLVL-SYLDDVVSrVRVYDLDGKLVREVPLPGLGSVSGFSGDDD--GDELFYSFTSFLTPPTLY 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 387 QWNMKTGERELLKQQEVKgFDKHHYESQRIWVKARDGVEVPVSLVYRKSLFEKGHNPILIYGYGAYGMSMDPSFSSPRLS 466
Cdd:COG1505  389 RYDLGTGESELLKKPPAP-FDASDYEVEQVFATSKDGTRVPYFIVHKKGLKLDGPNPTLLYGYGGFNISLTPSYSASGLA 467
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 467 LLDRGFVYALVHVRGGGELGKKWYLQGKVENKMNSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGAVINQAPELY 546
Cdd:COG1505  468 WLERGGVYAVANLRGGGEYGPAWHQAGLKENKQNVFDDFIAAAEDLIARGYTSPERLAIQGGSNGGLLVGAALTQRPELF 547
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 547 RGVVAQVPFVDavttMLdpsipLTVGEY--EEWGNPENKEDYFRIKSYSPYDNIKH-QRYPNLLVTSGFYDSQVQYWEPT 623
Cdd:COG1505  548 GAVVCAVPLLD----MLry-hkFTAGASwiAEYGDPDDPEEFAYLYAYSPYHNVKAgVAYPATLFTTADHDDRVHPAHAR 622
                        650       660
                 ....*....|....*....|....*....
gi 898307661 624 KWVAKLRDMKKGDS-VLLLEtNMSAGHGG 651
Cdd:COG1505  623 KFAARLQAAQAGDNpVLYRE-ETEGGHGA 650
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
458-670 6.28e-72

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 232.12  E-value: 6.28e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  458 PSFSSPRLSLLDRGFVYALVHVRGGGELGKKWYLQGKVENKMNSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGA 537
Cdd:pfam00326   1 PSFSWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGYLTGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661  538 VINQAPELYRGVVAQVPFVDAVTTMLDPSIPLTVgEYEEWGNP-ENKEDYFRIKSYSPYDNIKhqRYPNLLVTSGFYDSQ 616
Cdd:pfam00326  81 ALNQRPDLFKAAVAHVPVVDWLAYMSDTSLPFTE-RYMEWGNPwDNEEGYDYLSPYSPADNVK--VYPPLLLIHGLLDDR 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 898307661  617 VQYWEPTKWVAKLRdmKKGDSVLLLeTNMSAGHGGKSGRfNRLKDTALDYSFIL 670
Cdd:pfam00326 158 VPPWQSLKLVAALQ--RKGVPFLLL-IFPDEGHGIGKPR-NKVEEYARELAFLL 207
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
417-666 1.13e-21

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 94.31  E-value: 1.13e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 417 WVKARDGVEVPVSLVYRKslfEKGHNPILIYGYGaYGMSMDPSFSSPRLSLLDRGFVYALVHVRGGGELGKKWYLQgkve 496
Cdd:COG1506    1 TFKSADGTTLPGWLYLPA---DGKKYPVVVYVHG-GPGSRDDSFLPLAQALASRGYAVLAPDYRGYGESAGDWGGD---- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 497 nkmnSFNDFIDVTKALIAQKYGDSKRVYAMGGSAGGLLMGAVINQAPELYRGVVAQVPFVDaVTTMLDPSIPLTVGEYEE 576
Cdd:COG1506   73 ----EVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSD-LRSYYGTTREYTERLMGG 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 577 WgnPENKEDYFRiksYSPYDNIKHQRYPnLLVTSGFYDSQVQYWEPTKWVAKLRDMKKGDSVLLLETnmsAGHGGKSGRF 656
Cdd:COG1506  148 P--WEDPEAYAA---RSPLAYADKLKTP-LLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPG---EGHGFSGAGA 218
                        250
                 ....*....|
gi 898307661 657 NRLKDTALDY 666
Cdd:COG1506  219 PDYLERILDF 228
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
414-557 1.88e-05

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 46.83  E-value: 1.88e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 414 QRIWVKARDGVEVpVSLVYRKSLFEKGHNPILIygygAYGMSMDPSFSSPRLSLL-DRGFVYALVHVRGGGELGKKWYLQ 492
Cdd:COG1073   11 EDVTFKSRDGIKL-AGDLYLPAGASKKYPAVVV----AHGNGGVKEQRALYAQRLaELGFNVLAFDYRGYGESEGEPREE 85
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 898307661 493 GKVENkmnsfNDFIDVTKALIAQKYGDSKRVYAMGGSAGGllmGAVINQAPELYR--GVVAQVPFVD 557
Cdd:COG1073   86 GSPER-----RDARAAVDYLRTLPGVDPERIGLLGISLGG---GYALNAAATDPRvkAVILDSPFTS 144
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
413-577 1.25e-03

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 40.76  E-value: 1.25e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 413 SQRIWVKARDGVEvpvsLVYRKSLFEKGHNPILIY--GYGAYGMSMDPSFSSprlsLLDRGF-VYALVHvRG-GGELGKK 488
Cdd:COG2267    3 RRLVTLPTRDGLR----LRGRRWRPAGSPRGTVVLvhGLGEHSGRYAELAEA----LAAAGYaVLAFDL-RGhGRSDGPR 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 489 WYlqgkvenkMNSFNDFIDVTKALIAQ-KYGDSKRVYAMGGSAGGLLMGAVINQAPELYRGVVAQVPFVDAvttmlDPSI 567
Cdd:COG2267   74 GH--------VDSFDDYVDDLRAALDAlRARPGLPVVLLGHSMGGLIALLYAARYPDRVAGLVLLAPAYRA-----DPLL 140
                        170
                 ....*....|
gi 898307661 568 PLTVGEYEEW 577
Cdd:COG2267  141 GPSARWLRAL 150
LpqC COG3509
Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and ...
490-571 2.06e-03

Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and metabolism];


Pssm-ID: 442732 [Multi-domain]  Cd Length: 284  Bit Score: 40.76  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 898307661 490 YLQGKVENKMNSFNDFI---------DVT--KALIAQ---KYG-DSKRVYAMGGSAGGLLMGAVINQAPELYRGV--VAQ 552
Cdd:COG3509   88 YPEGTGRAPGRCWNWFDgrdqrrgrdDVAfiAALVDDlaaRYGiDPKRVYVTGLSAGGAMAYRLACEYPDVFAAVapVAG 167
                         90
                 ....*....|....*....
gi 898307661 553 VPFVDAVTTMLDPSIPLTV 571
Cdd:COG3509  168 LPYGAASDAACAPGRPVPV 186
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH