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Conserved domains on  [gi|887513766|gb|AKQ49216|]
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ATP synthase F0 subunit 6 (mitochondrion) [Bryodema miramae miramae]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 5.90e-99

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 286.68  E-value: 5.90e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDPSTNvFNMSLNWTSTFLGLYLIPSMFWLMPSLINILWNKLTLTLNNEFKTLLGqKSFQGSTFIFISIFIV 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  81 MLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513766 161 RPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSETY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 5.90e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 286.68  E-value: 5.90e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDPSTNvFNMSLNWTSTFLGLYLIPSMFWLMPSLINILWNKLTLTLNNEFKTLLGqKSFQGSTFIFISIFIV 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  81 MLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513766 161 RPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSETY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 2.55e-41

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 140.03  E-value: 2.55e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766    5 LFSTFDPST-NVFNMSLNWTSTFLGL--YLIPSMF--WLMPSLINILWNKLTLTLNNEFKTLLGQKSFQGSTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLliFLISSSLsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   80 VMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513766  160 VRPAANMIAGHLLLTLLGNTGPSLTMTTI-YILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 4.28e-38

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 129.44  E-value: 4.28e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  67 FQGSTFIFISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLI 146
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 887513766 147 ETISNIIRPGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
38-222 1.63e-22

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 91.01  E-value: 1.63e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   38 LMPSLINILWNKLTLTLNNEFKTLLGQKSFQGSTFIFISIFIVMLFNNFMGLF---PYIFTSTSHMTLTFSIALPMWVSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  115 MLFG-WINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTLAVRPAANMIAGH---LLLTLLGNTGPSLTMTTIYI 190
Cdd:pfam00119 105 HYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 887513766  191 LIIVQMLLLIVESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 4.97e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 78.96  E-value: 4.97e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  76 SIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFG-WINNTNHMFIHLVPQGTPnALMSFMVLIETISNIIR 154
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 887513766 155 PGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTtiYILIIVQMLLLIVESAVAMIQAYVFSILSTLY 220
Cdd:COG0356  142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLG--VLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 5.90e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 286.68  E-value: 5.90e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDPSTNvFNMSLNWTSTFLGLYLIPSMFWLMPSLINILWNKLTLTLNNEFKTLLGqKSFQGSTFIFISIFIV 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  81 MLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513766 161 RPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSETY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 4.92e-51

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 165.21  E-value: 4.92e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDP--STNVFNMSLNWTSTFLGLYLIPSMFWLMPSLINILWNKLTlTLNNEFKTLLGQKSFQGSTFIFISIF 78
Cdd:MTH00176   1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  79 IVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00176  80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766 159 AVRPAANMIAGHLLLTLLGNTGPSLTMTTIY---ILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSETY 225
Cdd:MTH00176 160 AVRLAANLSAGHLLLGLLGAAMWGLLPVSPLigfLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 2.55e-41

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 140.03  E-value: 2.55e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766    5 LFSTFDPST-NVFNMSLNWTSTFLGL--YLIPSMF--WLMPSLINILWNKLTLTLNNEFKTLLGQKSFQGSTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLliFLISSSLsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   80 VMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513766  160 VRPAANMIAGHLLLTLLGNTGPSLTMTTI-YILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 1.58e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 133.32  E-value: 1.58e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDPSTNVFNMSLN----WTSTFLGLYLIPSMFWLMPSLINILWNKLTLTLNNEFKTLLGqKSFQGSTFIFIS 76
Cdd:MTH00005   1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  77 IFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPG 156
Cdd:MTH00005  80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766 157 TLAVRPAANMIAGHLLLTLLGNTGPSLTMTTI---YILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00005 160 TLSFRLAANMSAGHIVLSLIGIYAASALFSSIsstILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 4.28e-38

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 129.44  E-value: 4.28e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  67 FQGSTFIFISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLI 146
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 887513766 147 ETISNIIRPGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-224 9.61e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 125.75  E-value: 9.61e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDPSTNVF--NMSLNWTSTFLGLYLIPSMFWLMPSLINILWNKLTLTLNNEFKTLLGqKSFQGSTFIFISIF 78
Cdd:MTH00173   1 MMVDLFSSFDDHNSSFssLSFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  79 IVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00173  80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766 159 AVRPAANMIAGHLLLTLLGNTGPSLTMTTIY----ILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSET 224
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVvsllLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.63e-35

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 125.47  E-value: 1.63e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   3 TNLFSTFDPSTnVFNMSLNWTSTFLGL---YLIPSMFWLmPSLINILWNkltLTLNNEFKTLLGQKSFQGSTFI--FISI 77
Cdd:MTH00035   5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWL---TFRQEILKLIFQNTNPNTAPWAglLTTV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  78 FIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGT 157
Cdd:MTH00035  80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 887513766 158 LAVRPAANMIAGHLLLTLLGNTGPSLTMTTIY--ILIIVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00035 160 LGLRLAANLTAGHLLIFLLSTAIWELSNSPLIsiITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 9.48e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 110.42  E-value: 9.48e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDpSTNVFNMSLNWTSTFLGLYLIPSmfwlmpSLINILWNKLTLTLNNEFKTLLGQ------KSFQGSTFIF 74
Cdd:MTH00179   1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPS------LTNRWLNNRLSTLQSWFFGSFTFQlmqpinKKGHKWAVLF 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  75 ISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIR 154
Cdd:MTH00179  74 LSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIR 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 887513766 155 PGTLAVRPAANMIAGHLLLTLLGNTGPSL--TMTTIYILI-IVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00179 154 PLALGVRLTANITAGHLLMHLISSAVFVLmnFMGMVALLTlLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 1.12e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 109.91  E-value: 1.12e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   1 MMTNLFSTFDPSTnvfnmsLNWTSTFLGLYLIPSMFWLMPS---LINILWNKLTLTLNNEFKTLLGQKSFQGS--TFIFI 75
Cdd:MTH00120   1 MNLNFFDQFSSPE------LLGIPLILLAMLIPALLIPSPKnrlLTNRLTTLQLWLIKLITKQLMLPLNKKGHkwALILT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  76 SIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRP 155
Cdd:MTH00120  75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 887513766 156 GTLAVRPAANMIAGHLLLTLLGNTGPSL--TMTTIYIL-IIVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00120 155 LALGVRLTANLTAGHLLIQLISTATLNLlpTMPTLSLLtLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-223 2.55e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 106.50  E-value: 2.55e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  73 IFISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNI 152
Cdd:MTH00132  72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 887513766 153 IRPGTLAVRPAANMIAGHLLLTLLGNTGPSL--TMTTIYILI-IVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00132 152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLlpLMPTVAILTaTLLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-220 7.96e-27

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 102.72  E-value: 7.96e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  71 TFIFISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETIS 150
Cdd:MTH00101  69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 887513766 151 NIIRPGTLAVRPAANMIAGHLLLTLLGNTGPSLT---MTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLY 220
Cdd:MTH00101 149 LFIQPMALAVRLTANITAGHLLIHLIGGATLALMsisTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 72-223 3.40e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 100.81  E-value: 3.40e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  72 FIFISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISN 151
Cdd:MTH00073  71 LILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISL 150

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513766 152 IIRPGTLAVRPAANMIAGHLLLTLLGNTGPSL--TMTTIYILI-IVQMLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00073 151 FIRPLALGVRLTANLTAGHLLIQLISTATLVLlpLMPTVSILTmIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
38-222 1.63e-22

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 91.01  E-value: 1.63e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766   38 LMPSLINILWNKLTLTLNNEFKTLLGQKSFQGSTFIFISIFIVMLFNNFMGLF---PYIFTSTSHMTLTFSIALPMWVSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  115 MLFG-WINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIRPGTLAVRPAANMIAGH---LLLTLLGNTGPSLTMTTIYI 190
Cdd:pfam00119 105 HYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 887513766  191 LIIVQMLLLIVESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 62-224 5.50e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 90.10  E-value: 5.50e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  62 LGQKSFQGSTFIfISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMS 141
Cdd:MTH00172  64 LGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAP 142

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766 142 FMVLIETISNIIRPGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTTIY-----ILIIVQMLLLivESAVAMIQAYVFSIL 216
Cdd:MTH00172 143 LLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGFlslfpLLIMVFITLL--EIAVAVIQAYVFCLL 220


                 ....*...
gi 887513766 217 STLYSSET 224
Cdd:MTH00172 221 TTIYLADT 228
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 75-225 8.65e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 89.68  E-value: 8.65e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  75 ISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIR 154
Cdd:MTH00175  87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 887513766 155 PGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLLI----VESAVAMIQAYVFSILSTLYSSETY 225
Cdd:MTH00175 167 AISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIYLGDTI 241
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 4.97e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 78.96  E-value: 4.97e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  76 SIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFG-WINNTNHMFIHLVPQGTPnALMSFMVLIETISNIIR 154
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 887513766 155 PGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTtiYILIIVQMLLLIVESAVAMIQAYVFSILSTLY 220
Cdd:COG0356  142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLG--VLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 75-224 5.30e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 74.21  E-value: 5.30e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  75 ISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNIIR 154
Cdd:MTH00174  95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 887513766 155 PGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLL----IVESAVAMIQAYVFSILSTLYSSET 224
Cdd:MTH00174 175 AISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILifvtILEMAVAIIQAYVFTLLTIVYLRDT 248
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 1.92e-14

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 69.44  E-value: 1.92e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  73 IFISIFIVMLFNNFMGLFP-YIFTSTSHMTLTFSIALPMWVSFMLFG-WINNTNHMFIHLVPQGTPnalmsFMVLIETIS 150
Cdd:PRK05815  75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766 151 NIIRPGTLAVRPAANMIAGHLLLTLLGnTGPSLTMTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLY 220
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIA-LLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 26-223 6.06e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 53.83  E-value: 6.06e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  26 FLGLYLIPSMFWLMPSLINILWNKLTLTLNNEFKTllgQKSFQGSTFIFISIFIVMLFNNFMGLFPYIFTSTSHMTLTFS 105
Cdd:MTH00087  10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSY---SNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766 106 IALPMWVSFMLFGWINNTnhMFIHLVPQGTPNALMSF-MVLIETISNIIRPGTLAVRPAANMIAGHLLLTLLgntgpsLT 184
Cdd:MTH00087  87 YALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLL------NF 158

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 887513766 185 MTTIYILIIVqmLLLIVESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00087 159 LGEKYVWLSI--LAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-220 1.30e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 53.98  E-value: 1.30e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  75 ISIFIVMLFNNFMGLFPYIFTSTSHMTLTFSIALpmwVSFMLFGWINNTNH----MFIHLVpQGTPNALMSFMVLIETIS 150
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 887513766 151 NIIRPGTLAVRPAANMIAGHLLLTLLGNTGPSLTMTTIYILIIVQMLLLI--VESAVAMIQAYVFSILSTLY 220
Cdd:PRK13419 251 LFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIylLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 74-217 2.34e-07

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 49.11  E-value: 2.34e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  74 FISIFIVMLFnnFMGL-FPYIFTSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETISNI 152
Cdd:MTH00050  27 SVVLFIVLFL--FLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYI 104

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 887513766 153 IRPGTLAVRPAANMIAGHLLLTLLGNtgpsLTMTTIYILIIVqMLLLIVESAVAMIQAY-VFSILS 217
Cdd:MTH00050 105 IRPVVLILRPFINISLGCFGGVALGN----LCFISYWWFLVL-FFLFFYEVFVALVHWFiVSSILS 165
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 1.55e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 41.80  E-value: 1.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 887513766  95 TSTSHMTLTFSIALPMWVSFMLFGWINNTNHMFIHLVPQGTPNALMSFMVLIETI-SNIIRPGTLAVRPAANMIAGHLLL 173
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 887513766 174 T-LLGNTGPSLTMTTIYILIIVQMLLLIVESAVAMIQAYVFSILSTLY 220
Cdd:PRK13417 297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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