|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.33e-164 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 461.21 E-value: 5.33e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 1 MNPKAKLITSTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 81 TGQWDITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSPNTTNHMKQWQTNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 86451884 321 VPTLTTILTSLSTMLLPLSPMILTIP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.52e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 389.16 E-value: 1.52e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 1 MNPKAKLITSTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 81 TGQWDITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSlNPTLLSSMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSPNTTNHMKQWQTNKS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 86451884 321 VPTLT-TILTSLSTMLLPLSPMILTI 345
Cdd:MTH00135 320 QLTLPlAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.99e-131 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 378.88 E-value: 1.99e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 1 MNPKAKLITSTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 81 TGQWDITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSPNTTNHMKQWQTNKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 86451884 321 VPTLTTILTSLSTMLLPLSPMILTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.11e-120 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 350.69 E-value: 2.11e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 1 MNPKAKLITSTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 81 TGQWDITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSPNTTNHMKQWQ-TNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQfENT 320
|
330 340
....*....|....*....|....*.
gi 86451884 320 SVPTLTTILTSLSTMLLPLSPMILTI 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.20e-95 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 287.25 E-value: 2.20e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 1 MNPKAKLITSTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 81 TGQWDITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSPNTTNHMKQWQTNKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 86451884 321 VPTLTTILTSLSTMLLPLSPMILTIP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-336 |
3.94e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 256.01 E-value: 3.94e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 11 TSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 91 HPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIASAALGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 171 NQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSLTATLMLMLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 251 LAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSPNTTNHMKQWQTNKSVPTLTTILTS 330
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSI 330
|
....*.
gi 86451884 331 LSTMLL 336
Cdd:MTH00041 331 LSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.57e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 201.98 E-value: 2.57e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 1 MNPKAKLITSTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 81 tgqwdITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFfltSSSLNPTLLSSMAIA 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 241 TATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCAtITMSPNTTNHMKQWQTNKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 86451884 321 VPTLtTILTSLSTMLLPLSPMILTI 345
Cdd:MTH00160 312 SLIL-NFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-305 |
2.38e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.15 E-value: 2.38e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDIThlthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 93 mscILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPitLFFLTSSSLNPTLLSS---MAIASAALGGWMG 169
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 170 LNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMaTAWTKIPSLTATLMLMLL 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL-GSLKPSYKTGLSIISLLL 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 86451884 250 SLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMS 305
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSS 297
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-340 |
4.83e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 159.56 E-value: 4.83e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 7 LITSTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSmtnawyTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 87 THLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIASAALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 167 WMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSLTATLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 247 MLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYcATITMSPNTTNhmkqwQTNKSVPTLTT 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS-----LKSAPYEPKTK 316
|
330
....*....|....
gi 86451884 327 ILTSLSTMLLPLSP 340
Cdd:MTH00011 317 ILISMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-298 |
3.15e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 144.04 E-value: 3.15e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 12 SLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAwytgqwdITHLTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------SNLYLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 92 PMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPitLFFLTSSSLNPTLLSSMAIASAALGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 172 QTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTSTLNLSSMATAWTKIPSLTATLMLMLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 86451884 252 AGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
9.88e-36 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 134.86 E-value: 9.88e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLF-SSMTNAwYTGQWDITHLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 92 PMS------------CILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMK----FPPITLFFLTSSSLNP---T 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 153 LLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTL--LTFYL--YSLTTAAIFS-----SLNTTS 223
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAvilllSRKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 86451884 224 TLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
6.31e-30 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 119.16 E-value: 6.31e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 93 ------------MSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMK---FPPIT-LFFLTSSSLNPT---L 153
Cdd:PRK05777 193 ladgsgnsllllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 154 LSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTL--LTFYL--YSLTTAAIFSSL-----NTTST 224
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVIsllrrKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 86451884 225 LNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
9.67e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 115.82 E-value: 9.67e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 93 ------------MSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMK----FPPITLFFLTSSSLNPT---L 153
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaifAVFLRLFLYILFGFSEAwqiF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 154 LSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTL--LTFYL--YSLTTAAIFSSL------NTTS 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 86451884 224 TLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
2.75e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 111.25 E-value: 2.75e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 23 SNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 91 HPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPT------LLSSMAIASAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 165 GGWMGLNQTQTRKILAFSSISHLGWMSIIL----IYNPKLTLLTFYLYSLTTAAIFS-----SLNTTSTLNLSSMATAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 86451884 236 KIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLS 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.33e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 101.65 E-value: 3.33e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAAASTLLLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 79 WYTGQWDITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLffLTSSSLNPTLLSSMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSI--LVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 159 IASAALGGWMGLNQTQTRKILAFSSISHLGW----MSIILIYNPKLTLLTFYLYSLTTAAIFS---SLNTTSTLnLSSMA 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFvlwgIEIGSFESIQASLVYLFIYIIMSICVFSiilALNVYKNL-IIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 86451884 232 TAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRL 296
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
9.27e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 98.30 E-value: 9.27e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHLTHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 93 MS----------CILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPI-------TLFFLTSSSLNP-TLL 154
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVyailrvlTLLFGADPALFLgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 155 SSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSI-ILIYNPK-LTLLTFYL--YSLTTAAIFSS----LNTTSTLN 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLgLAGALFHLlnHALAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 227 LSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.83e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 96.62 E-value: 4.83e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 88 HLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSsmAIASAALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 168 MGLNQTQTRKILAFSSISHLGW----MSIILIYNPKLTLLTFYLYSLTTAAIFS---SLNTTSTL--NLSSMAtawTKIP 238
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSiilSLKLTKGLivEVSGLS---RKNP 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 86451884 239 SLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRL 296
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
4.58e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 82.21 E-value: 4.58e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 15 LGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAI---------EASTKYFLTQAAASTLLLFSSMTNAWYTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 84 ------------WDITHLTHPMSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFppITLFFLTSSSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 152 TLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWM----------SIILIYNPKLTLLTFYLYSLTTAAIFSSLNT 221
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligvsagtyeSLQASWTYAVTYLVSALASFTVICTLEEFGT 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 222 TSTLN---------------LSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLS 286
Cdd:MTH00198 437 RTPTSrqrdgsfgnynlvrrLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 86451884 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-322 |
8.51e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 71.96 E-value: 8.51e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 51 RAIEASTKYFLTQAAASTLLLF---------------SSMTNAWYTGQWDIThLTHPMSCILLTAAISMKLGLVPFHFWF 115
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYgfswlyglsggeielQEIVNGLINTQMYNS-PGISIALIFITVGIGFKLSLAPFHQWT 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 116 PEVLQGS-----------SLTTSLLLATVMkfppITLFFLTSSSLNPTLLSSMAIASAALGGWMGLNQTQTRKILAFSSI 184
Cdd:CHL00049 238 PDVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 185 SHLGWMSIILI-------YNPKLTLLTFYLY----SLTTAAIFSSlnTTSTLNLSSMATAWTKIPSLTATLMLMLLSLAG 253
Cdd:CHL00049 314 GQIGYVIIGIIvgdsndgYASMITYMLFYIFmnlgTFACIVLFGL--RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGG 391
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 86451884 254 LPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSPNTTNHMKQWQTNKSVP 322
Cdd:CHL00049 392 IPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRS 460
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
8.88e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.89 E-value: 8.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 33 LEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFS-SMTNAWYtGQWDITHLTHPMS----------CILLTA 100
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiALLYGQY-GTLNMAYLAVKMSenptvvakiaLALFIA 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 101 AISMKLGLVPFHFWFPEVLQG--SSLTTSLLLATVMKFPPI--TLFFLTSSSLNPT----LLSSMAIASAALGGWMGLNQ 172
Cdd:PRK08376 229 GLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 173 TQTRKILAFSSISHLGWM------SIILIYNPKL-----TLLTFYLYSLTTAAIFSSL---------NTTSTLNLSSMAT 232
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMasygeIALAGGIYHIVNHALYKALlfltagaviYETGTRNLNELGG 388
|
250 260 270
....*....|....*....|....*....|....
gi 86451884 233 AWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-288 |
5.57e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 63.56 E-value: 5.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 49 HPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQW--DITHLT-HPMS-------CILLTAAISMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAaAPLPltaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 119 LQGSSLTTSLLLATVM---------KFPpITLFFLTSSSLNPtLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008 236 HVEAPTAGSVLLAGVLlkmggygllRFA-LPLFPEASAYFAP-LLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 190 MSI-ILIYNPK-LTLLTFYLYS--LTTAAIFSSL----NTTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFL 261
Cdd:COG1008 314 VLLgIFALNPLgLQGAVLQMVShgLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
250 260
....*....|....*....|....*..
gi 86451884 262 PKWLIIQELTKQDltTLATVIALLSLL 288
Cdd:COG1008 394 GEFLVLLGAFQVN--PWLAILAALGLI 418
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
5.61e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.36 E-value: 5.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 33 LEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFS-SMTNAwYTGQWDITHLTH--PMSCILLTA------AIS 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTAfgfvllALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 104 MKLGLVPFHFWFPEVLQG-SSLTTSLLLATVMKFP--PITLFFLT-------SSSLNPTLLSSMAIASAALGGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAvyALIRIYFTvfggdfrFALGLGWLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 174 QTRKILAFSSISHLGWMSIILIYNPKLTLL--TFYL--YSLTTAAIFSSLN----TTSTLNLSSMATAWTKIPSLTATLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 86451884 246 LMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
1.64e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 59.24 E-value: 1.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 34 EINTLAILPLISKSHHpRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHLTHPMS-----------CILLTAAI 102
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLIndtstgfalivFLFLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 103 SMKLGLVPFHFWFPE-----------VLQGS-SLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIA-----SAALG 165
Cdd:PRK08668 207 VAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAwlgniSIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 166 GWMGLNQTQTRKILAFSSISHLGWmsiILIYNPKLTLLTFY--LYSLTTAAIFSSL---------NTTSTLNLSSMATAW 234
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFAggLFHVFNHALFKGLfflifaaviYRTGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 86451884 235 TKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAY 298
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
1.79e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.80 E-value: 1.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 50 PRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQ-WDITHL-THPMSC-------ILLTAAISMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFgvqtwlfLAFFIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 121 GSSLTTSLLLATV---------MKFpPITLFFLTSSSLNPtLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMS 191
Cdd:TIGR01972 232 EAPTAGSVILAGVllkmgtygfLRF-NLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 192 I-ILIYNPKLTL-LTFYLYS--LTTAAIFSSLNT----TSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 310 LgIFSFNELGISgAVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
250 260
....*....|....*....|....*....
gi 86451884 264 WLIIQELTKqdlttLATVIALLSLLGLFF 292
Cdd:TIGR01972 390 FLILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-295 |
3.45e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 57.75 E-value: 3.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 50 PRAIEASTKYFLTQAAASTLLLF-SSMTNAWYTGQWDITHLTHPM----------SCILLTAAISMKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALitspslglalALVFVIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 119 LQGS-----------SLTTSLLLAT---VMKFPPITLFFltssslnPTLLSSMAIASAALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK02504 237 YEGSptpvvaflsvgSKAAGFALAIrllVTAFPSFDEQW-------KLLFTALAILSMVLGNVVALAQTSMKRMLAYSSI 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 185 SHLGWMSIILIYNPKLTLLTFYLYSLT---------TAAIFSSLNtTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLP 255
Cdd:PRK02504 310 GQAGFVMIGLVAGTEAGYASMVFYLLAylfmnlgafACVILFSLR-TGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIP 388
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 86451884 256 PLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLR 295
Cdd:PRK02504 389 PLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIR 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
1.60e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 55.93 E-value: 1.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 48 HHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHL----THPMSCILLTAAISM-------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaPTILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 117 EVLQGSSLTTSLLLATVM---------KFPPItlFFLTSSSLnpTLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHL 187
Cdd:COG1009 236 DAMEGPTPVSALLHAATMvkagvyllaRLSPL--FALSPVWL--TVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 188 GWMSIILiynpKLTLLTFYLYSLTTAAIFSSL---------NTTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLT 258
Cdd:COG1009 312 GYMFLAL----GVGAYVAALFHLLTHAFFKALlflgagsviHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFA 387
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 86451884 259 GFLPKWLIIQE-LTKQDLTTLATVIALL-SLLGLFFYLRLAY 298
Cdd:COG1009 388 GFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
7.50e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 48.41 E-value: 7.50e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 86451884 291 FFYLRLAYCATITMSPNTTNHMKQWQTNKSVPT-LTTILTSLSTMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-263 |
1.31e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 53.39 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 97 LLTAAISmKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLF------FLTSSSLNPTLLSsMAIASAALGGWMGL 170
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVLV-LGLATMLLGGWRAL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 171 NQTQTRKILAFSSISHLGWMSIILIYNPK------LTLLTfyLYSLTTAAIFSSL----NTTSTLNLSSMATAWTKIPSL 240
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALFLVVgiidHSTGTRDIRKLSGLGRRQPVL 364
|
170 180
....*....|....*....|...
gi 86451884 241 TATLMLMLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-302 |
3.76e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.97 E-value: 3.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 96 ILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLF--FLTSSSLNPT---LLSSMAIASAALGGWMGL 170
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 171 NQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSL--------NTTSTLNLSSMATAWTKIPSLTA 242
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLfmligvvdHQAGTRDIRRLGSLWRRMPFTFV 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 243 TLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTlATVIALLSLLGLFFYLRLAYCATI 302
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGN-AGVVLLLVGAALGAVFTFAYSARL 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
1.26e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.88 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 92 PMSCILLTAAI--SMKLGLvpfHFWFPEVLQGSSLTTSLLLATVMKFPPITLF-----FLTSSSLNPTLLSSMAIASAAL 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 165 GGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYS---------LTTAAIFSSLNTTSTlNLSSMATAWT 235
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNhaffkallfLSAGSVIHSTTVDEQ-DMRKMGGLIH 381
|
170 180 190
....*....|....*....|....*....|...
gi 86451884 236 KIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 382 SIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
1.37e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.56 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 34 EINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITH-----LTHPMSCILLTAAISMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 109 V------PFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFF--------LTSSSLNPTLLSSMAIASAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 175 TRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYS----LTTAAIF----SSLNTTSTLNLSSMATAWTKIPSLTATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFlgagIVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 247 MLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYcaTITMSPNTTnhmKQWQTNKSVPTLTT 326
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKPE---ELEYKNKKVPKYAV 444
|
330 340
....*....|....*....|..
gi 86451884 327 ----ILTSLSTmLLPLSPMILT 344
Cdd:PRK06277 445 fslaVLTILCI-ILGLFPDLVT 465
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-296 |
1.43e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 46.48 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 53 IEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHL-----------THPMSCILLTAAISMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 122 SSLTTSLLLATVMK-------FPPITLFFLTSSSLNPTLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSI-I 193
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 194 LIYNPK-LTLLTFYLYS--LTTAAIF----SSLNTTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAgINGAIFYLVHdmVVKTALFliagSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|
gi 86451884 267 IQELTKQDLTTLATVIALLSLLGLFFYLRL 296
Cdd:PRK12663 396 VQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-292 |
1.83e-05 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 46.46 E-value: 1.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 20 TISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFL------TQAAASTLLLFSS----MTNAWYTGQWD--IT 87
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANaatvMGDGEMAILWTelLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 88 HLTHPMSCILLTAAISM------KLGLVPFHFWFPE-----------VLQGSSLTTSLLLatVMKFPPITLFFLTSSSLN 150
Cdd:PRK06458 204 HASLLDPTLMKLAFVFLligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--VLRYYILIDAAIGSDFPG 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 151 PtLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKL----TLLTFYLYSLTTAAIFSS----LNTT 222
Cdd:PRK06458 282 R-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAIFFAsgnvLQKY 360
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 223 STLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLAtvIALLSLLGLFF 292
Cdd:PRK06458 361 GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIA--ILLLLLLTLAF 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
3.67e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 45.32 E-value: 3.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 96 ILLTAAISMKLGLVPFHFWFPE----------VLQGSSLTTSLLLATVMKFppiTLFFLTSSSLNPTLLSSMAIASAALG 165
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 166 GWMGLNQTQTRKILAFSSISHLGWMSI-ILIYNPK-LTLLTFYLYS--LTTAAIF----SSLNTTSTLNLSSMATAWTKI 237
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVgVAMMTESgMIGAIYYLIHdmIVKAALFlligIMIKITGTTDLKKMGGLIKRY 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 86451884 238 PSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRL 296
Cdd:PRK07691 370 PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
3.88e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.11 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 33 LEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFS-----------SMTNAWYTGQWDITHLTHPMSCILLTAA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 102 ISMKLGLVPFHFWFPEVLQGSSLTTSLLLA----TVMKFPPITL--------FFLTSSSLNPTLLSsMAIASAALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkanFVFTTLPFNNVFMI-LAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 170 LNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSLNTTS--------TLNLSSMATAWTKIPSLT 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSgsisyhfgTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 86451884 242 ATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-286 |
4.71e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.30 E-value: 4.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 109 VPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFfltsSSLNPTLLSSMA------IASAA---LGGWMGLNQTQTRKIL 179
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLL----ARLNPVLGGTPLwqtilpLFGGLtmlTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 180 AFSSISHLGWMSIILIYNPKLTLLTFYLY----SLTTAAIFSSLNT----TSTLNLSSMATAWTKIPSLTATLMLMLLSL 251
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSM 367
|
170 180 190
....*....|....*....|....*....|....*.
gi 86451884 252 AGLPPLTGFLPKWLIIQELTKQDL-TTLATVIALLS 286
Cdd:PRK12647 368 AGLPPLFGFLAKELIYEALLEAPLwSLILTVAAVLG 403
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
4.90e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.20 E-value: 4.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 48 HHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHLTHP--------------MSCILLTAAISMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 114 WFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPT-----LLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 189 WMSIILIYN----PKLTLLTFYLYSLTTAAIFSSL--------NTTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTtyhePGLGVAAATFHLLNHATFKACLflvagivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 86451884 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
81-291 |
5.00e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.11 E-value: 5.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 81 TGQWDITHLTHP-----MSCILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVM-KFPPITLFFLTSSSLNPTLL 154
Cdd:PRK08667 189 TGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMlKVAVYGLVRFLMDVLSPELW 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 155 SSMAI-----ASAALGGWMGLNQTQTRKILAFSSISHLG--WMSIILIYNPKLT-LLTFYLYSLTTA-------AIFSSL 219
Cdd:PRK08667 269 WGVLIllagsISALLGVIYALKEHDLKGLLAYSSIENIGiiLMGIGLYVIFGVYgLDTLALLALGGAlfhslnhALFKSL 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 220 ---------NTTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQ-DLTTLATVIALLSLLG 289
Cdd:PRK08667 349 lfltagsvvHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSfSVADPLIKILLFSVLA 428
|
..
gi 86451884 290 LF 291
Cdd:PRK08667 429 IF 430
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
6.28e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.56 E-value: 6.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 33 LEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDITHLTH--PMSCILLTAAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 111 FHFWFPEVLQGSSLTTSLLLA-TVMK---FPPITLFFLTSSSLNPtlLSSMAIASAALGGWMGLNQTQTRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgVVVKagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 187 LGWmsiILiynpkLTLLTFYLYSLTTAAIFSSL--------NTTSTLNLSSMATAWTKIPsltatLMLMLLSLAGLPPLT 258
Cdd:PRK07234 281 LGF---IL-----AAPLVGGLYALAHGLVKSTLflcagalpSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLA 347
|
250
....*....|...
gi 86451884 259 GFLPKWLIIQELT 271
Cdd:PRK07234 348 GFVSKVLTLKNLL 360
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
4-270 |
6.44e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.78 E-value: 6.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 4 KAKLITSTSLL--LGTTITISSNHWMM---AWTGLEINTLAILPLISKSHHPRAIeastkyFLTQAAASTLLLFSSMTNA 78
Cdd:PRK06459 70 YGKWLSSLYILtiLGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 79 WY-TGQWDITHLTHPMSCILLTAAISMKLGLVPFHF--WFPEVLQGSSLTTSLLLATVMKFPPI-----TLFFLTSSSLN 150
Cdd:PRK06459 144 FIiSGTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVygilkMTILTQTIPIG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 151 PTLLSSMAIA--SAALGGWMGLNQTQTRKILAFSSISHLGWM-----SIILIYNPKLTLLTFYLYSLTTAAIFSSLNTT- 222
Cdd:PRK06459 224 YFGLTILAIGafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSFAHSVAKTg 303
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 86451884 223 ---STLNLSSMATAWTKIPSLTAT---LMLMLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 304 lflSSGLQEKQSITYSKKIRNRWIelgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
7.22e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.31 E-value: 7.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 55 ASTKYFLTQAAASTLLLFSSMTNAWYTGQWD------ITHLTHPMSCILLTAAISMKLG----LVPFHFWFPEVLQGSSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSfdyeplRSHTLPLSTQLLLLAPILVGFGikipLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 86451884 125 TTSLLLATVM---------KFPpITLFFLTSSSLNPTLlSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVLlklgtygllRFG-VGLFPEAWVYLAPWL-ATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
1.52e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.48 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 55 ASTKYFLTQAAASTLLLFSSMTNAWYTGQ--WDITHLTH---PMSCILLT-----AAISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 125 TTSLLLATVM--------------KFPPITLFFltssslnPTLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:PRK12561 218 PVSMILAGVLlkmggyalirfnvqMLPDAHVYF-------APALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 191 SI-------ILIYNPKLTLLTfylYSLTTAAIF----SSLNTTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTG 259
Cdd:PRK12561 291 LLgiaaftdLGISGAMLQMIS---HGLIAAALFfltgVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSG 367
|
250 260 270
....*....|....*....|....*....|...
gi 86451884 260 FLPKWLIIQELTKQDL--TTLATVIALLSLLGL 290
Cdd:PRK12561 368 FVSELTVFLGITSSDVysSTFRTITILLAAVGL 400
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-298 |
2.47e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 42.76 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 95 CILLTAAISMKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIA-----SAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 170 LNQTQTRKILAFSSISHLGWMSIILiynpKLTLLTFYLYSLTTAAIFSSLNTTST----------LNLSSMATAWTKIPS 239
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFKALLFLSAgsvihalsdeQDMRKMGGLISFLPL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 240 LTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
88-293 |
3.28e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.43 E-value: 3.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 88 HLTHPMSCILLTAAISmKLGLVPFHFWFPEVLQGSSLTTSLLLATVMKFPPITLFF-----LTSSSLNPTLLSSMAIASA 162
Cdd:PRK12646 207 GLFIPMIFMFLLGAFT-KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFrftplLGLSNMYIYIVTFVGLITM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 163 ALGGWMGLNQTQTRKILAFSSISHLGW-MSII-----LIYNPKLTLLTFY-------LYSLTTAAIFSSL---------N 220
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCAlfmgvgiidH 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 221 TTSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTK--------QDLTTLATVIALLSLLGLFF 292
Cdd:PRK12646 366 EAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGVIASIFTFT 445
|
.
gi 86451884 293 Y 293
Cdd:PRK12646 446 Y 446
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
3.52e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.11 E-value: 3.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 50 PRAIEASTKYFLTQAAASTLLLFSSMTNAWY----TGQWDITHL-THPMSCILLT-------AAISMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 118 VLQGSSLTTSLLLATVM---------KFPpITLFFLTSSSLNPtLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlkmgaygllRFS-LPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 189 WMSI-ILIYNPK-LTLLTFYLYS--LTTAAIFSSLNT----TSTLNLSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGF 260
Cdd:PRK05846 315 FVTLgIFAGNQLgIQGAIFQMIShgLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
....*..
gi 86451884 261 LPKWLII 267
Cdd:PRK05846 395 VGEFLIL 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
1.60e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.12 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAA------STLLLFSSMTNAWYTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 87 THLTHPMSCI---LLTAAISM-------KLGLVPFHFWFPEV-LQGSSLTTSLLLATVMKFPPITLFFLTS-------SS 148
Cdd:PRK08676 191 TELAAHASLLspsVLGASFLFifigflaKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 149 LNPTLLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSLTTAAIFSSL-NTTSTLNL 227
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLfFSAGILHR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 86451884 228 SSMATAWTKI-------PSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLG---LFFYLR 295
Cdd:PRK08676 351 QYRSDRFDRIfdvfrlqPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-219 |
3.34e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.13 E-value: 3.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 101 AISMKLGLVPFHFWFPEVLQGSSLTTSLLLATV-MKFPPITLFFLT-------SSSLNPTLLsSMAIASAALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 86451884 173 TQTRKILAFSSISHLGWMSIILIYNpKLTLLTFYLYSLTTAAIFSSL 219
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTH-DIIGLTGSIFIMLAHGIVSSL 363
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-345 |
4.08e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 38.98 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 82 GQWDITHLTHPMSCILLTAAISM----KLGLVPFHFWFPEVLQG----SSLTTSLLLATVMKFPPITLF-FLTSSSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAptpvSALVHSSTLVTAGVFLLIRFYpFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 153 LLSSMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMSIIL-IYNPKLTLLTFYLYSLTTAAIFSSLNTT-----STLN 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLgLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 227 LSSMATAWTKIPSLTATLMLMLLSLAGLPPLTGFLPKWLIIQELTKQDLTTLATVIALLSLLGLFFYLRLAYCATITMSP 306
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPN 404
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 86451884 307 NTTNHMKQWQTNKSVPTLTTILTSLS---------TMLLPLSPMILTI 345
Cdd:MTH00207 405 SSSPYHHLEDEDKSLTTPMLLLTLGAitsgsalnwWLPTPQEEPILPL 452
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-293 |
7.37e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 37.84 E-value: 7.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 21 ISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWYTGQWDIT----HLTHPMSCI 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTdiaaYLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 97 LLTAAIS-------MKLGLVPFHFWFPEVLQGSS---------LTTSLLLATVMKFPPITLFFLTSSSLNPTLLSSMAIA 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 86451884 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMSIILIYNPKLTLLTFYLYSlttaaifSSLNTTSTLNLSSMATAWTKIPSL 240
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLA-------DSINKIALFLIDAYNESYKREPNK 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 86451884 241 TATLMLMLLSLaGLPPLTGFLPKWLIIQELTKQDLtTLATVIALLSLLGLFFY 293
Cdd:PRK06591 365 VLIIIAIICSC-GLPISPLFFIKVNILELLLTQNL-LLDFIIILLSSVGSLFY 415
|
|
| |
