DNA primase [Propionibacterium phage PHL116M00]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
zf-CHC2 super family | cl21601 | CHC2 zinc finger; This domain is principally involved in DNA binding in DNA primases. |
36-76 | 4.65e-11 | ||
CHC2 zinc finger; This domain is principally involved in DNA binding in DNA primases. The actual alignment was detected with superfamily member smart00400: Pssm-ID: 451328 [Multi-domain] Cd Length: 55 Bit Score: 54.22 E-value: 4.65e-11
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Name | Accession | Description | Interval | E-value | ||
ZnF_CHCC | smart00400 | zinc finger; |
36-76 | 4.65e-11 | ||
zinc finger; Pssm-ID: 128681 [Multi-domain] Cd Length: 55 Bit Score: 54.22 E-value: 4.65e-11
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dnaG | TIGR01391 | DNA primase, catalytic core; Members of this family are DNA primase, a ubiquitous bacteria ... |
36-75 | 8.17e-10 | ||
DNA primase, catalytic core; Members of this family are DNA primase, a ubiquitous bacteria protein. Most members of this family contain nearly two hundred additional residues C-terminal to the region represented here, but conservation between species is poor and the C-terminal region was not included in the seed alignment. This protein contains a CHC2 zinc finger (pfam01807) and a Toprim domain (pfam01751). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273595 [Multi-domain] Cd Length: 415 Bit Score: 55.30 E-value: 8.17e-10
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zf-CHC2 | pfam01807 | CHC2 zinc finger; This domain is principally involved in DNA binding in DNA primases. |
36-65 | 1.08e-09 | ||
CHC2 zinc finger; This domain is principally involved in DNA binding in DNA primases. Pssm-ID: 426447 [Multi-domain] Cd Length: 95 Bit Score: 51.87 E-value: 1.08e-09
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DnaG | COG0358 | DNA primase (bacterial type) [Replication, recombination and repair]; |
36-65 | 3.01e-09 | ||
DNA primase (bacterial type) [Replication, recombination and repair]; Pssm-ID: 440127 [Multi-domain] Cd Length: 465 Bit Score: 53.60 E-value: 3.01e-09
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Name | Accession | Description | Interval | E-value | ||
ZnF_CHCC | smart00400 | zinc finger; |
36-76 | 4.65e-11 | ||
zinc finger; Pssm-ID: 128681 [Multi-domain] Cd Length: 55 Bit Score: 54.22 E-value: 4.65e-11
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dnaG | TIGR01391 | DNA primase, catalytic core; Members of this family are DNA primase, a ubiquitous bacteria ... |
36-75 | 8.17e-10 | ||
DNA primase, catalytic core; Members of this family are DNA primase, a ubiquitous bacteria protein. Most members of this family contain nearly two hundred additional residues C-terminal to the region represented here, but conservation between species is poor and the C-terminal region was not included in the seed alignment. This protein contains a CHC2 zinc finger (pfam01807) and a Toprim domain (pfam01751). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273595 [Multi-domain] Cd Length: 415 Bit Score: 55.30 E-value: 8.17e-10
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zf-CHC2 | pfam01807 | CHC2 zinc finger; This domain is principally involved in DNA binding in DNA primases. |
36-65 | 1.08e-09 | ||
CHC2 zinc finger; This domain is principally involved in DNA binding in DNA primases. Pssm-ID: 426447 [Multi-domain] Cd Length: 95 Bit Score: 51.87 E-value: 1.08e-09
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DnaG | COG0358 | DNA primase (bacterial type) [Replication, recombination and repair]; |
36-65 | 3.01e-09 | ||
DNA primase (bacterial type) [Replication, recombination and repair]; Pssm-ID: 440127 [Multi-domain] Cd Length: 465 Bit Score: 53.60 E-value: 3.01e-09
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Blast search parameters | ||||
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