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Conserved domains on  [gi|848889322|ref|XP_012844827|]
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PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial-like, partial [Erythranthe guttata]

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 11441299)

NAD(P)/FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant; similar to sulfide:quinone oxidoreductase which catalyzes the oxidation of hydrogen sulfide using quinone as the electron acceptor

EC:  1.6.-.-
Gene Ontology:  GO:0003954|GO:0006116
PubMed:  15590775|28181562

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
32-449 1.85e-105

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


:

Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 319.00  E-value: 1.85e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  32 RPRVCILGGGFGGLYTALRLESLDwpeGKKPQVVLVDQCERFAFKPLLYELLSGEVDEWEIAPRFSDLLSNTAVQFFKDR 111
Cdd:COG1252    1 MKRIVIVGGGFAGLEAARRLRKKL---GGDAEVTLIDPNPYHLFQPLLPEVAAGTLSPDDIAIPLRELLRRAGVRFIQGE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 112 VQSLHPSDHlgmagdtvsrsagVVHLESGLLIEYDWLVLALGAETKLDVVPGAVEYALPFSTLRDAHRVNEKLIH-LERK 190
Cdd:COG1252   78 VTGIDPEAR-------------TVTLADGRTLSYDYLVIATGSVTNFFGIPGLAEHALPLKTLEDALALRERLLAaFERA 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 191 SfgNDSPIRVAIVGCGYSGVELAATISERLKDRGVVQAINVDK----------SILPNAPPGNRESAQKVLSSRNVQLLL 260
Cdd:COG1252  145 E--RRRLLTIVVVGGGPTGVELAGELAELLRKLLRYPGIDPDKvritlveagpRILPGLGEKLSEAAEKELEKRGVEVHT 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 261 GYFVRCIKKDdtteshnneryilelqpaerGVESK---VIEVDLVLWTVGSK--PLLAELEqsdkpiyLPLNGRGQAETD 335
Cdd:COG1252  223 GTRVTEVDAD--------------------GVTLEdgeEIPADTVIWAAGVKapPLLADLG-------LPTDRRGRVLVD 275

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 336 ETLRVKGHPRIFAVGDSSAVRDGNGNLLPGTAQVAFQQADFAGWNLWAAINGRPLLPFRFQNLGEMMSLGRYDAAITpsf 415
Cdd:COG1252  276 PTLQVPGHPNVFAIGDCAAVPDPDGKPVPKTAQAAVQQAKVLAKNIAALLRGKPLKPFRYRDKGCLASLGRGAAVAD--- 352

                        410       420       430
                 ....*....|....*....|....*....|....
gi 848889322 416 IDGLTLEGPIGHTARKIAYLIRLPTDEHRLKVGI 449
Cdd:COG1252  353 VGGLKLSGFLAWLLKRAIHLYFLPGFRGRLRVLL 386
 
Name Accession Description Interval E-value
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
32-449 1.85e-105

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 319.00  E-value: 1.85e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  32 RPRVCILGGGFGGLYTALRLESLDwpeGKKPQVVLVDQCERFAFKPLLYELLSGEVDEWEIAPRFSDLLSNTAVQFFKDR 111
Cdd:COG1252    1 MKRIVIVGGGFAGLEAARRLRKKL---GGDAEVTLIDPNPYHLFQPLLPEVAAGTLSPDDIAIPLRELLRRAGVRFIQGE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 112 VQSLHPSDHlgmagdtvsrsagVVHLESGLLIEYDWLVLALGAETKLDVVPGAVEYALPFSTLRDAHRVNEKLIH-LERK 190
Cdd:COG1252   78 VTGIDPEAR-------------TVTLADGRTLSYDYLVIATGSVTNFFGIPGLAEHALPLKTLEDALALRERLLAaFERA 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 191 SfgNDSPIRVAIVGCGYSGVELAATISERLKDRGVVQAINVDK----------SILPNAPPGNRESAQKVLSSRNVQLLL 260
Cdd:COG1252  145 E--RRRLLTIVVVGGGPTGVELAGELAELLRKLLRYPGIDPDKvritlveagpRILPGLGEKLSEAAEKELEKRGVEVHT 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 261 GYFVRCIKKDdtteshnneryilelqpaerGVESK---VIEVDLVLWTVGSK--PLLAELEqsdkpiyLPLNGRGQAETD 335
Cdd:COG1252  223 GTRVTEVDAD--------------------GVTLEdgeEIPADTVIWAAGVKapPLLADLG-------LPTDRRGRVLVD 275

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 336 ETLRVKGHPRIFAVGDSSAVRDGNGNLLPGTAQVAFQQADFAGWNLWAAINGRPLLPFRFQNLGEMMSLGRYDAAITpsf 415
Cdd:COG1252  276 PTLQVPGHPNVFAIGDCAAVPDPDGKPVPKTAQAAVQQAKVLAKNIAALLRGKPLKPFRYRDKGCLASLGRGAAVAD--- 352

                        410       420       430
                 ....*....|....*....|....*....|....
gi 848889322 416 IDGLTLEGPIGHTARKIAYLIRLPTDEHRLKVGI 449
Cdd:COG1252  353 VGGLKLSGFLAWLLKRAIHLYFLPGFRGRLRVLL 386
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 33-374 2.43e-34

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 130.52  E-value: 2.43e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322   33 PRVCILGGGFGGLYTALRLESLdwpEGKkpqVVLVDQCERFA-FKPLLYELLSGEVDEWEIAPRFSDLLS--NTAVQFFK 109
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQL---GGK---VTLIEDEGTCPyGGCVLSKALLGAAEAPEIASLWADLYKrkEEVVKKLN 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  110 DRVQSLhpsdhLGMAGDTVSRSAGVVHLE-----SGLLIEYDWLVLALGAETKLDVVPGAVEYA-LPFSTLRDAHRVNEK 183
Cdd:pfam07992  75 NGIEVL-----LGTEVVSIDPGAKKVVLEelvdgDGETITYDRLVIATGARPRLPPIPGVELNVgFLVRTLDSAEALRLK 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  184 LIhlerksfgndsPIRVAIVGCGYSGVELAATISERLKDRGVVQAINVdksILPNAPPGNRESAQKVLSSRNVQLLLGYF 263
Cdd:pfam07992 150 LL-----------PKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDR---LLRAFDEEISAALEKALEKNGVEVRLGTS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  264 VRCIKKDDtteshnnERYILELQpaergvESKVIEVDLVLWTVGSKPLLAELEQSDkpiyLPLNGRGQAETDETLRVKgH 343
Cdd:pfam07992 216 VKEIIGDG-------DGVEVILK------DGTEIDADLVVVAIGRRPNTELLEAAG----LELDERGGIVVDEYLRTS-V 277

                         330       340       350
                  ....*....|....*....|....*....|.
gi 848889322  344 PRIFAVGDSSAVRdgngnllPGTAQVAFQQA 374
Cdd:pfam07992 278 PGIYAAGDCRVGG-------PELAQNAVAQG 301
PTZ00318 PTZ00318
NADH dehydrogenase-like protein; Provisional
 31-457 1.32e-30

NADH dehydrogenase-like protein; Provisional


Pssm-ID: 185553 [Multi-domain]  Cd Length: 424  Bit Score: 122.95  E-value: 1.32e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  31 KRPRVCILGGGFGGLYTALRLESldwpegKKPQVVLVDQCERFAFKPLLYELLSGEVDEWEIAPRFSDLLSNTAVQFFKD 110
Cdd:PTZ00318   9 KKPNVVVLGTGWAGAYFVRNLDP------KKYNITVISPRNHMLFTPLLPQTTTGTLEFRSICEPVRPALAKLPNRYLRA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 111 RVQSLHPSDHLGMAGDTvsrSAGVVHLESGLLIEYDWLVLALGAETKLDVVPGAVEYALPFSTLRDAHRVNEKLIH-LER 189
Cdd:PTZ00318  83 VVYDVDFEEKRVKCGVV---SKSNNANVNTFSVPYDKLVVAHGARPNTFNIPGVEERAFFLKEVNHARGIRKRIVQcIER 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 190 KSFGNDSP------IRVAIVGCGYSGVELAATISERLKDrgvvQAINVDKSILPNAPPGNRESAQKVLSSRNvQLLLGYF 263
Cdd:PTZ00318 160 ASLPTTSVeerkrlLHFVVVGGGPTGVEFAAELADFFRD----DVRNLNPELVEECKVTVLEAGSEVLGSFD-QALRKYG 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 264 VRCIKKddtteSHNNERyileLQPAERGVESK--------VIEVDLVLWT--VGSKPLLAELEQSDKpiylplnGRGQAE 333
Cdd:PTZ00318 235 QRRLRR-----LGVDIR----TKTAVKEVLDKevvlkdgeVIPTGLVVWStgVGPGPLTKQLKVDKT-------SRGRIS 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 334 TDETLRVKGHPRIFAVGDSSAVrdgNGNLLPGTAQVAFQQADFAGWNLWAAINGRPLL-PFRFQNLGEMMSLGRYDAAIT 412
Cdd:PTZ00318 299 VDDHLRVKPIPNVFALGDCAAN---EERPLPTLAQVASQQGVYLAKEFNNELKGKPMSkPFVYRSLGSLAYLGNYSAIVQ 375

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 848889322 413 PSFIDgltLEGPIGHTARKIAYLIRLPTDEHRLKVGISWlAKSAV 457
Cdd:PTZ00318 376 LGAFD---LSGFKALLFWRSAYLTILGSWRSKLYVLVNW-AGTAI 416
 
Name Accession Description Interval E-value
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
32-449 1.85e-105

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 319.00  E-value: 1.85e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  32 RPRVCILGGGFGGLYTALRLESLDwpeGKKPQVVLVDQCERFAFKPLLYELLSGEVDEWEIAPRFSDLLSNTAVQFFKDR 111
Cdd:COG1252    1 MKRIVIVGGGFAGLEAARRLRKKL---GGDAEVTLIDPNPYHLFQPLLPEVAAGTLSPDDIAIPLRELLRRAGVRFIQGE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 112 VQSLHPSDHlgmagdtvsrsagVVHLESGLLIEYDWLVLALGAETKLDVVPGAVEYALPFSTLRDAHRVNEKLIH-LERK 190
Cdd:COG1252   78 VTGIDPEAR-------------TVTLADGRTLSYDYLVIATGSVTNFFGIPGLAEHALPLKTLEDALALRERLLAaFERA 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 191 SfgNDSPIRVAIVGCGYSGVELAATISERLKDRGVVQAINVDK----------SILPNAPPGNRESAQKVLSSRNVQLLL 260
Cdd:COG1252  145 E--RRRLLTIVVVGGGPTGVELAGELAELLRKLLRYPGIDPDKvritlveagpRILPGLGEKLSEAAEKELEKRGVEVHT 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 261 GYFVRCIKKDdtteshnneryilelqpaerGVESK---VIEVDLVLWTVGSK--PLLAELEqsdkpiyLPLNGRGQAETD 335
Cdd:COG1252  223 GTRVTEVDAD--------------------GVTLEdgeEIPADTVIWAAGVKapPLLADLG-------LPTDRRGRVLVD 275

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 336 ETLRVKGHPRIFAVGDSSAVRDGNGNLLPGTAQVAFQQADFAGWNLWAAINGRPLLPFRFQNLGEMMSLGRYDAAITpsf 415
Cdd:COG1252  276 PTLQVPGHPNVFAIGDCAAVPDPDGKPVPKTAQAAVQQAKVLAKNIAALLRGKPLKPFRYRDKGCLASLGRGAAVAD--- 352

                        410       420       430
                 ....*....|....*....|....*....|....
gi 848889322 416 IDGLTLEGPIGHTARKIAYLIRLPTDEHRLKVGI 449
Cdd:COG1252  353 VGGLKLSGFLAWLLKRAIHLYFLPGFRGRLRVLL 386
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 33-374 2.43e-34

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 130.52  E-value: 2.43e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322   33 PRVCILGGGFGGLYTALRLESLdwpEGKkpqVVLVDQCERFA-FKPLLYELLSGEVDEWEIAPRFSDLLS--NTAVQFFK 109
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQL---GGK---VTLIEDEGTCPyGGCVLSKALLGAAEAPEIASLWADLYKrkEEVVKKLN 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  110 DRVQSLhpsdhLGMAGDTVSRSAGVVHLE-----SGLLIEYDWLVLALGAETKLDVVPGAVEYA-LPFSTLRDAHRVNEK 183
Cdd:pfam07992  75 NGIEVL-----LGTEVVSIDPGAKKVVLEelvdgDGETITYDRLVIATGARPRLPPIPGVELNVgFLVRTLDSAEALRLK 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  184 LIhlerksfgndsPIRVAIVGCGYSGVELAATISERLKDRGVVQAINVdksILPNAPPGNRESAQKVLSSRNVQLLLGYF 263
Cdd:pfam07992 150 LL-----------PKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDR---LLRAFDEEISAALEKALEKNGVEVRLGTS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  264 VRCIKKDDtteshnnERYILELQpaergvESKVIEVDLVLWTVGSKPLLAELEQSDkpiyLPLNGRGQAETDETLRVKgH 343
Cdd:pfam07992 216 VKEIIGDG-------DGVEVILK------DGTEIDADLVVVAIGRRPNTELLEAAG----LELDERGGIVVDEYLRTS-V 277

                         330       340       350
                  ....*....|....*....|....*....|.
gi 848889322  344 PRIFAVGDSSAVRdgngnllPGTAQVAFQQA 374
Cdd:pfam07992 278 PGIYAAGDCRVGG-------PELAQNAVAQG 301
PTZ00318 PTZ00318
NADH dehydrogenase-like protein; Provisional
 31-457 1.32e-30

NADH dehydrogenase-like protein; Provisional


Pssm-ID: 185553 [Multi-domain]  Cd Length: 424  Bit Score: 122.95  E-value: 1.32e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  31 KRPRVCILGGGFGGLYTALRLESldwpegKKPQVVLVDQCERFAFKPLLYELLSGEVDEWEIAPRFSDLLSNTAVQFFKD 110
Cdd:PTZ00318   9 KKPNVVVLGTGWAGAYFVRNLDP------KKYNITVISPRNHMLFTPLLPQTTTGTLEFRSICEPVRPALAKLPNRYLRA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 111 RVQSLHPSDHLGMAGDTvsrSAGVVHLESGLLIEYDWLVLALGAETKLDVVPGAVEYALPFSTLRDAHRVNEKLIH-LER 189
Cdd:PTZ00318  83 VVYDVDFEEKRVKCGVV---SKSNNANVNTFSVPYDKLVVAHGARPNTFNIPGVEERAFFLKEVNHARGIRKRIVQcIER 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 190 KSFGNDSP------IRVAIVGCGYSGVELAATISERLKDrgvvQAINVDKSILPNAPPGNRESAQKVLSSRNvQLLLGYF 263
Cdd:PTZ00318 160 ASLPTTSVeerkrlLHFVVVGGGPTGVEFAAELADFFRD----DVRNLNPELVEECKVTVLEAGSEVLGSFD-QALRKYG 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 264 VRCIKKddtteSHNNERyileLQPAERGVESK--------VIEVDLVLWT--VGSKPLLAELEQSDKpiylplnGRGQAE 333
Cdd:PTZ00318 235 QRRLRR-----LGVDIR----TKTAVKEVLDKevvlkdgeVIPTGLVVWStgVGPGPLTKQLKVDKT-------SRGRIS 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 334 TDETLRVKGHPRIFAVGDSSAVrdgNGNLLPGTAQVAFQQADFAGWNLWAAINGRPLL-PFRFQNLGEMMSLGRYDAAIT 412
Cdd:PTZ00318 299 VDDHLRVKPIPNVFALGDCAAN---EERPLPTLAQVASQQGVYLAKEFNNELKGKPMSkPFVYRSLGSLAYLGNYSAIVQ 375

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 848889322 413 PSFIDgltLEGPIGHTARKIAYLIRLPTDEHRLKVGISWlAKSAV 457
Cdd:PTZ00318 376 LGAFD---LSGFKALLFWRSAYLTILGSWRSKLYVLVNW-AGTAI 416
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 58-396 1.42e-22

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 97.96  E-value: 1.42e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  58 EGKKPQVVLVDQCERFAFKP--LLYeLLSGEVDEWEiaprfsDLLSNTAVQFFKDRVQsLHPsdhlgmaGDTVS---RSA 132
Cdd:COG0446    2 LGPDAEITVIEKGPHHSYQPcgLPY-YVGGGIKDPE------DLLVRTPESFERKGID-VRT-------GTEVTaidPEA 66

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 133 GVVHLESGLLIEYDWLVLALGAETKLDVVPGA-VEYALPFSTLRDAHRVNEKLihlerksfGNDSPIRVAIVGCGYSGVE 211
Cdd:COG0446   67 KTVTLRDGETLSYDKLVLATGARPRPPPIPGLdLPGVFTLRTLDDADALREAL--------KEFKGKRAVVIGGGPIGLE 138

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 212 LAATiserLKDRGV-VQAINVDKSILPNAPPGNRESAQKVLSSRNVQLLLGYFVRCIKKDDtteshnneRYILELQpaer 290
Cdd:COG0446  139 LAEA----LRKRGLkVTLVERAPRLLGVLDPEMAALLEEELREHGVELRLGETVVAIDGDD--------KVAVTLT---- 202

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 291 gvESKVIEVDLVLWTVGSKPLLAELEQSDkpiyLPLNGRGQAETDETLRVkGHPRIFAVGDSSAVRD---GNGNLLPGtA 367
Cdd:COG0446  203 --DGEEIPADLVVVAPGVRPNTELAKDAG----LALGERGWIKVDETLQT-SDPDVYAAGDCAEVPHpvtGKTVYIPL-A 274

                        330       340
                 ....*....|....*....|....*....
gi 848889322 368 QVAFQQADFAGwnlwAAINGRPlLPFRFQ 396
Cdd:COG0446  275 SAANKQGRVAA----ENILGGP-APFPGL 298
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
32-381 3.34e-19

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 89.43  E-value: 3.34e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  32 RPRVCILGGGFGGLYTALRLESLDwPEGkkpQVVLVDQCERFAF-KPLLYELLSGEVDEWEIAPRfsdllsntAVQFFKD 110
Cdd:COG1251    1 KMRIVIIGAGMAGVRAAEELRKLD-PDG---EITVIGAEPHPPYnRPPLSKVLAGETDEEDLLLR--------PADFYEE 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 111 RVQSLHPsdhlgmaGDTVS---RSAGVVHLESGLLIEYDWLVLALGAETKLDVVPGA-VEYALPFSTLRDAHRVNEkliH 186
Cdd:COG1251   69 NGIDLRL-------GTRVTaidRAARTVTLADGETLPYDKLVLATGSRPRVPPIPGAdLPGVFTLRTLDDADALRA---A 138

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 187 LERKSfgndspiRVAIVGCGYSGVELAATiserLKDRGV-VQAINVDKSILPNA-PPGNRESAQKVLSSRNVQLLLGYFV 264
Cdd:COG1251  139 LAPGK-------RVVVIGGGLIGLEAAAA----LRKRGLeVTVVERAPRLLPRQlDEEAGALLQRLLEALGVEVRLGTGV 207

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 265 RCIKKDDtteshnneryilelqpAERGVESK---VIEVDLVLWTVGSKPLLAELEQSDKPIylplnGRGqAETDETLRVk 341
Cdd:COG1251  208 TEIEGDD----------------RVTGVRLAdgeELPADLVVVAIGVRPNTELARAAGLAV-----DRG-IVVDDYLRT- 264

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 848889322 342 GHPRIFAVGDSSAVRDGN-GNLLPGTAQVAFQQADFAGWNL 381
Cdd:COG1251  265 SDPDIYAAGDCAEHPGPVyGRRVLELVAPAYEQARVAAANL 305
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 35-381 1.37e-13

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 72.43  E-value: 1.37e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322  35 VCILGGGFGGLYTALRLESLdwpeGKKpqVVLVdqcERFAF------------KPLLYellSGEV-DEWEIAPRFSDLLS 101
Cdd:COG1249    6 LVVIGAGPGGYVAAIRAAQL----GLK--VALV---EKGRLggtclnvgcipsKALLH---AAEVaHEARHAAEFGISAG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 102 NTAVQF-----FKDRVQSLHPSDHLGM---AGDTVSR------SAGVVHLESGLLIEYDWLVLALGAE-TKLDVVPGAVE 166
Cdd:COG1249   74 APSVDWaalmaRKDKVVDRLRGGVEELlkkNGVDVIRgrarfvDPHTVEVTGGETLTADHIVIATGSRpRVPPIPGLDEV 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 167 YALpfsTLRDAhrvneklIHLERKsfgndsPIRVAIVGCGYSGVELaATISERLkdrGV-VQAINVDKSILPNAPPGNRE 245
Cdd:COG1249  154 RVL---TSDEA-------LELEEL------PKSLVVIGGGYIGLEF-AQIFARL---GSeVTLVERGDRLLPGEDPEISE 213

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 246 SAQKVLSSRNVQLLLGYFVRCIKKDDtteshnnERYILELqpaERGVESKVIEVDLVLWTVGSKPLLAE--LEQSDkpiy 323
Cdd:COG1249  214 ALEKALEKEGIDILTGAKVTSVEKTG-------DGVTVTL---EDGGGEEAVEADKVLVATGRRPNTDGlgLEAAG---- 279

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 848889322 324 LPLNGRGQAETDETLRVkGHPRIFAVGDssaVRDGngnllPGTAQVAFQQADFAGWNL 381
Cdd:COG1249  280 VELDERGGIKVDEYLRT-SVPGIYAIGD---VTGG-----PQLAHVASAEGRVAAENI 328
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 143-381 1.11e-10

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 63.27  E-value: 1.11e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 143 IEYDWLVLALGAetKLDVVPGAveyalpfsTLRDAHR--VNEKLIHLErksfgnDSPIRVAIVGCGYSGVELAATISeRL 220
Cdd:PRK06292 129 IEAKNIVIATGS--RVPPIPGV--------WLILGDRllTSDDAFELD------KLPKSLAVIGGGVIGLELGQALS-RL 191

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 221 kdrGV-VQAINVDKSILPNAPPGNRESAQKVLSSRnVQLLLGYFVRCIKKDDtteshnNERYILElqpaERGVESKVIEV 299
Cdd:PRK06292 192 ---GVkVTVFERGDRILPLEDPEVSKQAQKILSKE-FKIKLGAKVTSVEKSG------DEKVEEL----EKGGKTETIEA 257

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 300 DLVLWTVGSKPLLAEL--EQSDkpiyLPLNGRGQAETDETLRvKGHPRIFAVGDSSAVRdgngnLLpgtAQVAFQQADFA 377
Cdd:PRK06292 258 DYVLVATGRRPNTDGLglENTG----IELDERGRPVVDEHTQ-TSVPGIYAAGDVNGKP-----PL---LHEAADEGRIA 324


                 ....
gi 848889322 378 GWNL 381
Cdd:PRK06292 325 AENA 328
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 197-389 3.47e-09

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 58.62  E-value: 3.47e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 197 PIRVAIVGCGYSGVELAA---------TISERLKdrgvvqainvdkSILPNAPPGNRESAQKVLSSRNVQLLLGYFVRCI 267
Cdd:PRK06416 172 PKSLVVIGGGYIGVEFASayaslgaevTIVEALP------------RILPGEDKEISKLAERALKKRGIKIKTGAKAKKV 239

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 268 KKDDTT-ESHNneryilelqpaERGVESKVIEVDLVLWTVGSKPLLAE--LEQSDKPIylplnGRGQAETDETLRvKGHP 344
Cdd:PRK06416 240 EQTDDGvTVTL-----------EDGGKEETLEADYVLVAVGRRPNTENlgLEELGVKT-----DRGFIEVDEQLR-TNVP 302

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 848889322 345 RIFAVGDssaVRDGngnllPGTAQVAFQQADFAGwnlwAAINGRP 389
Cdd:PRK06416 303 NIYAIGD---IVGG-----PMLAHKASAEGIIAA----EAIAGNP 335
PRK09754 PRK09754
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
 120-362 3.36e-07

phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional


Pssm-ID: 170080 [Multi-domain]  Cd Length: 396  Bit Score: 52.23  E-value: 3.36e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 120 HLGMAGDTVSRSAGVVHLESGLLIEYDWLVLALGAETK-LDVVPGAVEYALPFSTLRDAHRVNEkLIHLERksfgndspi 198
Cdd:PRK09754  76 HSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARpLPLLDALGERCFTLRHAGDAARLRE-VLQPER--------- 145

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 199 RVAIVGCGYSGVELAATISERLKDRGVV-QAINVdksILPNAPPgnreSAQKVLSSRNVQLLLGYFVrcikkDDTTES-H 276
Cdd:PRK09754 146 SVVIVGAGTIGLELAASATQRRCKVTVIeLAATV---MGRNAPP----PVQRYLLQRHQQAGVRILL-----NNAIEHvV 213

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 277 NNERYILELQPAERgveskvIEVDLVLWTVGSkpllaelEQSDK-PIYLPLNGRGQAETDETLRVkGHPRIFAVGDSSAV 355
Cdd:PRK09754 214 DGEKVELTLQSGET------LQADVVIYGIGI-------SANDQlAREANLDTANGIVIDEACRT-CDPAIFAGGDVAIT 279


                 ....*..
gi 848889322 356 RDGNGNL 362
Cdd:PRK09754 280 RLDNGAL 286
PRK06116 PRK06116
glutathione reductase; Validated
 197-351 5.69e-07

glutathione reductase; Validated


Pssm-ID: 235701 [Multi-domain]  Cd Length: 450  Bit Score: 51.70  E-value: 5.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 197 PIRVAIVGCGYSGVELAatiserlkdrGVVQAINVD-------KSILPNAPPGNRESAQKVLSSRNVQLLLGYFVRCIKK 269
Cdd:PRK06116 167 PKRVAVVGAGYIAVEFA----------GVLNGLGSEthlfvrgDAPLRGFDPDIRETLVEEMEKKGIRLHTNAVPKAVEK 236

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 270 DDtteshnNERYILELQPAErgveskVIEVDLVLWTVGSKPLLAE--LEQSDkpiyLPLNGRGQAETDETLR--VKGhpr 345
Cdd:PRK06116 237 NA------DGSLTLTLEDGE------TLTVDCLIWAIGREPNTDGlgLENAG----VKLNEKGYIIVDEYQNtnVPG--- 297


                 ....*.
gi 848889322 346 IFAVGD 351
Cdd:PRK06116 298 IYAVGD 303
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
199-358 4.18e-06

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 48.58  E-value: 4.18e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 199 RVAIVGCGYSGVELAATISERLKDrgvVQAINVDKSIlpnapPGNRESAQKVLSSRNVQLLLGYFVRCIKKDDTTEShnn 278
Cdd:COG0492  143 DVVVVGGGDSALEEALYLTKFASK---VTLIHRRDEL-----RASKILVERLRANPKIEVLWNTEVTEIEGDGRVEG--- 211

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 279 eryiLELQPAERGvESKVIEVDLVLWTVGSKPLLAELEQSDkpiyLPLNGRGQAETDETLR--VkghPRIFAVGDssaVR 356
Cdd:COG0492  212 ----VTLKNVKTG-EEKELEVDGVFVAIGLKPNTELLKGLG----LELDEDGYIVVDEDMEtsV---PGVFAAGD---VR 276


                 ..
gi 848889322 357 DG 358
Cdd:COG0492  277 DY 278
PRK07251 PRK07251
FAD-containing oxidoreductase;
163-351 5.46e-06

FAD-containing oxidoreductase;


Pssm-ID: 180907 [Multi-domain]  Cd Length: 438  Bit Score: 48.59  E-value: 5.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 163 GAVEYALPFSTLRDAHRVNE-----KLIHLerksfgndsPIRVAIVGCGYSGVELaATISERLKDRgvVQAINVDKSILP 237
Cdd:PRK07251 127 GAVSNVLPIPGLADSKHVYDstgiqSLETL---------PERLGIIGGGNIGLEF-AGLYNKLGSK--VTVLDAASTILP 194

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 238 NAPPGNRESAQKVLSSRNVQLLLGYFVRCIKK--DDTTESHNNERYILelqpaergveskvievDLVLWTVGSKPLLAE- 314
Cdd:PRK07251 195 REEPSVAALAKQYMEEDGITFLLNAHTTEVKNdgDQVLVVTEDETYRF----------------DALLYATGRKPNTEPl 258

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 848889322 315 -LEQSDkpiyLPLNGRGQAETDETLRVKgHPRIFAVGD 351
Cdd:PRK07251 259 gLENTD----IELTERGAIKVDDYCQTS-VPGVFAVGD 291
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 199-271 1.00e-04

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 40.65  E-value: 1.00e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 848889322  199 RVAIVGCGYSGVELAATiserLKDRGV-VQAINVDKSILPNAPPGNRESAQKVLSSRNVQLLLGYFVRCIKKDD 271
Cdd:pfam00070   1 RVVVVGGGYIGLELAGA----LARLGSkVTVVERRDRLLPGFDPEIAKILQEKLEKNGIEFLLNTTVEAIEGNG 70
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 141-356 3.20e-04

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 42.81  E-value: 3.20e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 141 LLIEYDWLVLALGAET--KLDVvPGA----VEYALPFstLRDAHRVNEKL-IHLERKsfgndspiRVAIVGCGYSGVElA 213
Cdd:COG0493  203 LLEEFDAVFLATGAGKprDLGI-PGEdlkgVHSAMDF--LTAVNLGEAPDtILAVGK--------RVVVIGGGNTAMD-C 270

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 214 ATISERLKDRGVVQAINVDKSILPnAPPGNRESAQ----KVLSSRNVQLLLGYF------VRCIKkddTTESHNNERYIL 283
Cdd:COG0493  271 ARTALRLGAESVTIVYRRTREEMP-ASKEEVEEALeegvEFLFLVAPVEIIGDEngrvtgLECVR---MELGEPDESGRR 346

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 848889322 284 ELQPAErGvESKVIEVDLVLWTVGSKPLLAELEQSDKpiyLPLNGRGQAETDETLRVKGHPRIFAVGDssAVR 356
Cdd:COG0493  347 RPVPIE-G-SEFTLPADLVILAIGQTPDPSGLEEELG---LELDKRGTIVVDEETYQTSLPGVFAGGD--AVR 412
PRK04965 PRK04965
NADH:flavorubredoxin reductase NorW;
143-364 1.26e-03

NADH:flavorubredoxin reductase NorW;


Pssm-ID: 179902 [Multi-domain]  Cd Length: 377  Bit Score: 41.06  E-value: 1.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 143 IEYDWLVLALGAETKLDVVPGAV---------EYALPFSTLRDAHRVneklihlerksfgndspirvAIVGCGYSGVELA 213
Cdd:PRK04965  98 WQYDKLVLATGASAFVPPIPGRElmltlnsqqEYRAAETQLRDAQRV--------------------LVVGGGLIGTELA 157

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 214 ATISERLKdrgvvQAINVDK--SILPN-APPGNRESAQKVLSSRNVQLLLGYFVRCIKKDDTTeshnnerYILELQpaer 290
Cdd:PRK04965 158 MDLCRAGK-----AVTLVDNaaSLLASlMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSG-------IRATLD---- 221

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 848889322 291 gvESKVIEVDLVLWTVGSKPLLAELEQSDKPIylplnGRGQAeTDETLRVKgHPRIFAVGDSSAVrdgNGNLLP 364
Cdd:PRK04965 222 --SGRSIEVDAVIAAAGLRPNTALARRAGLAV-----NRGIV-VDSYLQTS-APDIYALGDCAEI---NGQVLP 283
PRK09564 PRK09564
coenzyme A disulfide reductase; Reviewed
 134-357 1.34e-03

coenzyme A disulfide reductase; Reviewed


Pssm-ID: 181958 [Multi-domain]  Cd Length: 444  Bit Score: 41.18  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 134 VVHLESGLLIE--YDWLVLALGAETkldVVPGAVEYALP-FSTLR---DAHRVNEKLIHLERKsfgndspiRVAIVGCGY 207
Cdd:PRK09564  91 VKNLKTGSIFNdtYDKLMIATGARP---IIPPIKNINLEnVYTLKsmeDGLALKELLKDEEIK--------NIVIIGAGF 159

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 208 SGVELAATISERLKDrgvVQAINVDKSILPNA-PPGNRESAQKVLSSRNVQLLLGYFVRCIKKDDTTES--HNNERYile 284
Cdd:PRK09564 160 IGLEAVEAAKHLGKN---VRIIQLEDRILPDSfDKEITDVMEEELRENGVELHLNEFVKSLIGEDKVEGvvTDKGEY--- 233

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 848889322 285 lqpaergveskviEVDLVLWTVGSKPLLAELEQSDkpiyLPLNGRGQAETDETLRVKGhPRIFAVGDSSAVRD 357
Cdd:PRK09564 234 -------------EADVVIVATGVKPNTEFLEDTG----LKTLKNGAIIVDEYGETSI-ENIYAAGDCATIYN 288
PRK06327 PRK06327
dihydrolipoamide dehydrogenase; Validated
 197-351 7.88e-03

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235779 [Multi-domain]  Cd Length: 475  Bit Score: 38.75  E-value: 7.88e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 197 PIRVAIVGCGYSGVELaATISERLkdrGV-VQAINVDKSILPNAPPGNRESAQKVLSSRNVQLLLGYFVRCIKKDDTTES 275
Cdd:PRK06327 183 PKKLAVIGAGVIGLEL-GSVWRRL---GAeVTILEALPAFLAAADEQVAKEAAKAFTKQGLDIHLGVKIGEIKTGGKGVS 258

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 848889322 276 hnneryileLQPAERGVESKVIEVDLVLWTVGSKP----LLAEleqsdkPIYLPLNGRGQAETDETLRVkGHPRIFAVGD 351
Cdd:PRK06327 259 ---------VAYTDADGEAQTLEVDKLIVSIGRVPntdgLGLE------AVGLKLDERGFIPVDDHCRT-NVPNVYAIGD 322
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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