|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 716.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSMELMIFSNHYLGVDRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 81 QNHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 161 LVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 241 YGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 321 LTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488646 401 LITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPELTWGT 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 651.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSMELMIFSNHYLGVDRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 81 QNHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 161 LVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 241 YGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 321 LTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 84488646 401 LITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPELTWGTF 458
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 615.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSMELMIFSNHYLGVDRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 81 QNHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 161 LVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 241 YGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 321 LTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488646 401 LITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPELTWGTFY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 543.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSMEL-MIFSNHYLGVDRISAPLLTLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETgWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 80 SQNHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 160 LLVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 240 GYGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 320 GLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLG 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488646 400 MLITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPELTWG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-453 |
1.32e-171 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 489.45 E-value: 1.32e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 3 KIIIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSME-LMIFSNHYLGVDRISAPLLTLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEvGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 82 NHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 162 VALSYMQTQNGTLSTYTMQLNQptmMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 242 GIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 322 TSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 84488646 402 ITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPEL 453
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-453 |
3.81e-155 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 447.89 E-value: 3.81e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSMELMIFS-NHYLGVDRISAPLLTLSCWLTPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNlSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 80 SQNHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 160 LLVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 240 GYGIIRITMTLN-PLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 319 HGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 84488646 399 GMLITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPEL 453
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNI 455
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-453 |
1.33e-128 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 379.50 E-value: 1.33e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNPKQLwsttLTYSFGISLLSLQLSKSSMELMIFSNHYLGVDRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 81 QNHLTTEPISRKrtFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNL--FLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 161 LVALSYMQTQNGTLSTYTMqlnqptMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLL------NFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 241 YGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 321 LTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 84488646 401 LITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPEL 453
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDL 441
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-453 |
2.57e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 357.61 E-value: 2.57e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 52 SNHYLGVDRISAPLLTLSCWLTPLMILASQNHLTTEPISRKrtFTATIIFLQISLILAFSATELIMFFITFETTLIPTLI 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSS--FSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 132 IITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSWahsTWWFALLIAFMIKMPLYG 211
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 292 SHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 372 TINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKP 451
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
..
gi 84488646 452 EL 453
Cdd:MTH00150 411 DL 412
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-453 |
3.34e-118 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 353.28 E-value: 3.34e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNpKQLWSTTLTYSFGISLLSLQLSKSSMELMIFSNHYLGVDRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 81 QNHLTTEPISRkrTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 161 LVALSYMQTQNGTLSTYTMQLNQPTMMTSwahSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 241 YGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 321 LTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 84488646 401 LITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPEL 453
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDL 447
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-453 |
2.34e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 335.80 E-value: 2.34e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 5 IIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSMELMIFSNHYLGVDRISAPLLTLSCWLTPLMILASQNHL 84
Cdd:MTH00205 2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 85 TTEpiSRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVAL 164
Cdd:MTH00205 82 KSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 165 SYMQTQNGTLStytMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGII 244
Cdd:MTH00205 160 FFLNSLNFSLS---MFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 245 RITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSS 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 325 MLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGMLITA 404
Cdd:MTH00205 317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 84488646 405 TYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPEL 453
Cdd:MTH00205 397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKI 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-447 |
3.37e-89 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 280.04 E-value: 3.37e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 55 YLGVDRISAPLLTLSCWLTPLMILASQNHLTTepisRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIIT 134
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 135 RWGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLST-YT--MQLNQPTMMTSWAhstwWFALLIAFMIKMPLYG 211
Cdd:COG1008 153 IWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFdIAelAAAPLPLTAQLLL----FLAFFIAFAVKVPMFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPL-SKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSS 290
Cdd:COG1008 228 FHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 291 VSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALP 370
Cdd:COG1008 308 VSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 84488646 371 PTINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILL 447
Cdd:COG1008 388 GTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
53-447 |
4.84e-77 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 248.58 E-value: 4.84e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 53 NHYLGVDRISAPLLTLSCWLTPLMILASQNHLTTepisRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLII 132
Cdd:PRK05846 75 SYHLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSYM----QTQNGTLS-TYTMQLNQPTMMTSWAhstwWFALLIAFMIKM 207
Cdd:PRK05846 151 IGVWGGK-NRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDiADLLNLPLPPGVQYWL----FLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPL-SKTLSYPFMTMALWGVVMTSSICLRQTDLKSLI 286
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 287 AYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLF----LTRNMQLLLPLMglwwLLA 362
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIAdyggLAKVMPVLAAFF----LFF 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 363 SLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHIL 442
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVA 461
|
....*
gi 84488646 443 PMILL 447
Cdd:PRK05846 462 LLLLL 466
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-447 |
1.37e-75 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 244.46 E-value: 1.37e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 53 NHYLGVDRISAPLLTLSCWLTPLMILASQNHLTtepiSRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLII 132
Cdd:TIGR01972 70 SYHLGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPtmMTSWAHSTWWFALLIAFMIKMPLYGL 212
Cdd:TIGR01972 146 IGVWGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLP--LPFGVQTWLFLAFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNP-LSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSV 291
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 292 SHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 84488646 372 TINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGE-TPSYMKAIPPTHTREHLLMTLHILPMILL 447
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGElSNPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-399 |
3.21e-71 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 227.20 E-value: 3.21e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 112 ATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSWA 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 192 HSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPFMTMALWGVVM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 272 TSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLA-NTNYERTHSRMLFLTRNMQL 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 84488646 351 LLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLG 399
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-451 |
1.02e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 224.17 E-value: 1.02e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 55 YLGVDRISAPLLTLSCWLTPLMILASQNHLTTepisRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIIT 134
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 135 RWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLStYTMQLNQ--PTMMTSWAhstwWFALLIAFMIKMPLYGL 212
Cdd:MTH00204 154 IWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTD-YQILLNIklPLSIQKWL----LVGFFLSLAVKIPQIPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPFMTM-ALWGVVMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00204 229 HIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlSVIAVIYGSLTTCRQVDFKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 292 SHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:MTH00204 309 AHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPL 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 372 TINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKP 451
Cdd:MTH00204 389 SCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVP 468
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
50-410 |
9.30e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 221.46 E-value: 9.30e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 50 IFSNHYLGVDRISAPLLTLSCWLTPLMILASQNHLTtepiSRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPT 129
Cdd:MTH00217 70 VFGPVVFAVDGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPM 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 130 LIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTlsTYTMQLNQPTMMTSWAHSTWwFALLIAFMIKMPL 209
Cdd:MTH00217 146 FLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGT--TDYQALCCLKIEKELQYFIF-LGFFLSLAIKIPK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 210 YGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPF-MTMALWGVVMTSSICLRQTDLKSLIAY 288
Cdd:MTH00217 223 IPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 289 SSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMA 368
Cdd:MTH00217 303 SSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANAS 382
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 84488646 369 LPPTINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFM 410
Cdd:MTH00217 383 IPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-451 |
2.61e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 210.55 E-value: 2.61e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILASQNHLTTepisRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 136 WGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTlsTYTMQLNQPTMMTSWAHSTWWF-ALLIAFMIKMPLYGLHL 214
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGT--TDYLTLASCSHVVSEQTQKWIFlGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 215 WLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPL-SKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 294 MGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTI 373
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488646 374 NLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKP 451
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYP 489
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-411 |
1.78e-51 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 181.38 E-value: 1.78e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILASQNhlttepISRK-RTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIIT 134
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK------VTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLIS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 135 RWGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQL---NQPTMMTSWAHStwwfALLIAFMIKMPLYG 211
Cdd:PRK12561 129 IWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELgakSYPLALELLLYA----GFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYP-FMTMALWGVVMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 291 VSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALP 370
Cdd:PRK12561 284 VSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALP 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 84488646 371 PTINLMGELTI---ITSLFNWSNT----TILMTGLGMLITATYTLFML 411
Cdd:PRK12561 364 GMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSML 411
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
107-424 |
2.42e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 173.17 E-value: 2.42e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 107 ILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYmqtqngtlSTYTMQLNQPTM 186
Cdd:MTH00094 76 LLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYFDF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 187 MTSWahsTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRItmtLNPLSKTLSYPFMTMAL 266
Cdd:MTH00094 148 FLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFWIIFSL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 267 WGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTR 346
Cdd:MTH00094 222 LGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMN 301
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488646 347 NMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGETPSYMK 424
Cdd:MTH00094 302 SFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFN 379
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-428 |
7.61e-48 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 171.42 E-value: 7.61e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 53 NHYLGVDRISAPLLTLSCWLTPLMILASQnhlttEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLII 132
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSwAHSTWWFALLIAFMIKMPLYGL 212
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPFM-TMALWGVVMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 292 SHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTR---NMQLLLPLMGLWWLLASLTNMA 368
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRgllNPERGLPITGSLMILGVMASAG 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 369 LPPTINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQWGETPSYMKAIPP 428
Cdd:PRK06473 385 IPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-387 |
1.42e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 163.78 E-value: 1.42e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILASQNHLTTEpiSRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITR 135
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 136 WGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFaLLIAFMIKMPLYGLHLW 215
Cdd:COG0651 150 GGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNP--LSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:COG0651 228 LPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 294 MGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTI 373
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330
....*....|....
gi 84488646 374 NLMGELTIITSLFN 387
Cdd:COG0651 388 GFVSKWLLLQAALE 401
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
56-411 |
1.96e-42 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 156.64 E-value: 1.96e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILASQnhlttePISRK-RTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIIT 134
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 135 RWGNQmERLNAGTYFLFYTLIGSLPLLValsymqtqnGTLSTYTMQLNQPTM-MTSWAHSTWWFAL--------LIAFMI 205
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLI---------GVLGMGLYGSNEPTLnFETLANQSYPVALeilfyigfLIAYAV 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPF-MTMALWGVVMTSSICLRQTDLKS 284
Cdd:CHL00011 224 KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 285 LIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERThsRMLFLTR--NMQLLLPLMGLWWLLA 362
Cdd:CHL00011 304 RIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSF 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 84488646 363 SLTNMALPPTINLMGELT----IITSLFNWSNTTILMT---GLGMLITATYTLFML 411
Cdd:CHL00011 382 SMASLALPGMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTPIYLLSML 437
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-411 |
2.19e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 146.00 E-value: 2.19e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILASQnhlttePISRK-RTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIIT 134
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 135 RWGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSWaHSTWWFALLIAFMIKMPLYGLHL 214
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 215 WLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPFMTmaLWGVV------MTSsicLRQTDLKSLIAY 288
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLI--VLGVVniiyaaLTS---FAQRNLKRKIAY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 289 SSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMA 368
Cdd:PRK02546 310 SSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLA 389
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 84488646 369 LPPTINLMGELTIITSL-------FNWSNTTILMTGLGMLITATYTLFML 411
Cdd:PRK02546 390 LPGMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-329 |
1.25e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 135.22 E-value: 1.25e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 53 NHYLGVDRISAPLLTLSCWLTPLMILASqnhltTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLII 132
Cdd:PRK07363 72 SYSLGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNG-------TLSTYTMQLNQPTMMTSwahstwwfALLIAFMI 205
Cdd:PRK07363 147 IAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGstsfdydAISTQNLSLNTQLILLT--------GLLLGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPfmTMALWG---VVMTSSICLRQTDL 282
Cdd:PRK07363 218 KIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGtisVIYGALSAIAQKDI 295
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 84488646 283 KSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCL 329
Cdd:PRK07363 296 KRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHL 342
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-447 |
1.72e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.13 E-value: 1.72e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 58 VDRISAPLLTLSCWLTPLMILASQNHLTTEpiSRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 138 NQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTL-----STYTMQLNQPTMMTSWAHSTWWFAL-----LIAFMIKM 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlSAKIRGLSFPLTGGLAGNPPLALGValalaLWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-------LNPLSKTLSYPFMTMALWGVVMTSSICLRQT 280
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 281 DLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWL 360
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 361 LASLTNMALPPTINLMGELTIITSLFNWSnttILMTGLGMLITATYTLF----MLITTQWGETPSymkaIPPTHTREHLL 436
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLVgyfrAWYSLFFGKPKS----GEEVEHKESPS 470
|
410
....*....|.
gi 84488646 437 MTLHILPMILL 447
Cdd:PRK12667 471 MSVVILVLALA 481
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-447 |
3.15e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 98.80 E-value: 3.15e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILASQNhlTTEPISRKrtFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITR 135
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIG--YGEHRQTR--FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 136 WGNQmERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLstyTMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLW 215
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL---NMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTL----NPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 292 SHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRML----FLTRNMqlllPLMGLWWLLASLTNM 367
Cdd:PRK08375 305 SQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLselsGLGRRM----PLTAAAFAVASLSLI 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 368 ALPPTINLMGELTIITSLF---NWSNTTILMtgLGMLITATYTLFMLITTQWGETPSYMkaiPPTHTREHLLMTLHILPM 444
Cdd:PRK08375 381 GVPPTSGFVSKWYLVVGAVeagQWLVLAVLL--ASSLLALLYFLRIWYRAFFGPPPPGS---EAPKQEAPLGMLAPSLAL 455
|
...
gi 84488646 445 ILL 447
Cdd:PRK08375 456 ALL 458
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-448 |
1.62e-21 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 96.92 E-value: 1.62e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 199 LLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTL--NPLSKTLSYPFMTMALWGVVMTSSIC 276
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 277 LRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMG 356
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 357 LWWLLASLTNMALPPTINLMGELTIITSLFN---WSNTTILMTGLGMLITAtytLFMLIT-TQWGEtpsymkaiPPTHTR 432
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAA---LVRRVAgMVFGE--------PPEAVN 448
|
250
....*....|....*.
gi 84488646 433 EHLLMTLHILPMILLM 448
Cdd:PRK06458 449 RGDLGWLTTSPMFVHL 464
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
2.01e-20 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 86.04 E-value: 2.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 1 MLKIIIPTVLLLPTITFCNPKQLWSTTLTYSFGISLLSLQLSKSSMELMI-FSNHYLGVDRISAPLLTLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWsNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 84488646 80 SQNHLTTEPISRKRTFTATIIFLQISLILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
100-387 |
1.41e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 81.51 E-value: 1.41e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 100 IFLQISL---ILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSt 176
Cdd:MTH00062 75 FFLFLSLifsILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN- 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 177 ytmqLNQPTMMTSWAHSTWWfALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSkT 256
Cdd:MTH00062 154 ----FSDWGSDDSVSLIVYY-VLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS-F 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 257 LSYPFMTMALWGVVMTSSicLRQTDLKSLIAYSSVSHMgLVIAAALTQTQWSYTGAITLM-IAHGLTSSMLFCLANTNYE 335
Cdd:MTH00062 228 LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYE 304
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 84488646 336 RTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFN 387
Cdd:MTH00062 305 VSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-370 |
4.60e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 80.00 E-value: 4.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 90 SRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITrWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQT 169
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 170 QNGTLSTYTMQLNQPTMmtswahstwwFALLIA-FMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITM 248
Cdd:PRK07234 170 ANGTFAFSGLATADPEA----------FALIALgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCAL 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 249 TLNPLSKTLSYPFMTMALWGVVmtssICLRQTDLKSLIAYSSVSHMGLVIAAALtqtqwsyTGAItLMIAHGLTSSMLFC 328
Cdd:PRK07234 240 DVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPL-------VGGL-YALAHGLVKSTLFL 307
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 84488646 329 LANTNYERTHSRMLFLTRNMQLLLPLmglwwLLASLTNMALP 370
Cdd:PRK07234 308 CAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFP 344
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
56-416 |
9.24e-16 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 79.25 E-value: 9.24e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILASQNHLTTE----PIS--RKRTFTATIIFLQISLILAFSATeLIMFFITFETTLIPT 129
Cdd:PRK06525 71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehPVHegTGRYYAFLLLFIGAMAGLVYSST-LLGLLLFFEITGLCS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 130 LIIITRWGNQMERLNAGTYFLFyTLIGSLPLLVALSYMQTQNGTLSTYTMQLnqptmMTSWAHSTWWFALLIAFMIKMPL 209
Cdd:PRK06525 150 WALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALSG-----LHGSLKYLVFLGILFAAWGKSAQ 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 210 YGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAY 288
Cdd:PRK06525 224 LPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 289 SSVSHMG---LVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLT 365
Cdd:PRK06525 303 STITQLGymfFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALA 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 84488646 366 NMALPPTINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLFMLITTQW 416
Cdd:PRK06525 383 ITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAWFLRW 433
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
95-427 |
3.56e-15 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 78.16 E-value: 3.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 95 FTATIIFLQIslilafsATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTyfLFYTLIGSLPLLVALSYMQTQNGTl 174
Cdd:PRK12650 119 FMAAMLLLVL-------ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGT- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 175 stytMQLNQPTMMTSWAHSTWwFALLIAFMIKMPLYG------LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITM 248
Cdd:PRK12650 189 ----TSLSGILHSDVWAEKPG-LTTVVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 249 TLNPLSkTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFC 328
Cdd:PRK12650 264 VFHDVA-VWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFM 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 329 LANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSL----FNWSNTTILM--TGLGMLI 402
Cdd:PRK12650 343 LIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFleapGGNAGVVLLLvgAALGAVF 422
|
330 340
....*....|....*....|....*
gi 84488646 403 TATYTLfMLITTQWGETPSYMKAIP 427
Cdd:PRK12650 423 TFAYSA-RLVLGAFVDGPRDMSHVK 446
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
1.24e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.19 E-value: 1.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 110 FSATELIMFFITFETTLIPTLIIITRwGNQMERLNAGTYFLFyTLIGSLPLLVALSYMQTQNGTLStYTMQLNQPTMMTS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFD-FADISQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 190 WAHSTWWFALLIAFMI-KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIrITMTLNPLSK------------T 256
Cdd:PRK08668 192 TGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKlfsefgtyrgvpL 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 84488646 257 LSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLF 327
Cdd:PRK08668 271 FNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-414 |
1.41e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 75.56 E-value: 1.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 93 RTFTATIIFLQISLILAFSATELIMFFITFE-TTLIPTLIIITRwgNQMERLNAGTYFLF-------YTLIGsLPLLVAL 164
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFiastamiFAFIG-LIFLFSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 165 SYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFaLLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGII 244
Cdd:PRK08676 179 TRQALGTGTLNWTELAAHASLLSPSVLGASFLF-IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGIL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 245 RITMTL--NPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLT 322
Cdd:PRK08676 258 RLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 323 SSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGMLI 402
Cdd:PRK08676 338 KSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLL 417
|
330
....*....|..
gi 84488646 403 TATYTLFMLITT 414
Cdd:PRK08676 418 AASSFAIFLLKA 429
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
56-386 |
1.55e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 75.92 E-value: 1.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLTPLMILAS---QNHLTTEpiSRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLII 132
Cdd:PRK08667 73 FHIDRLAAFFIILIGLVSLCVAIYSlgyNEHMSSN--ERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 133 ITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTytmqlnQPTMMTSWAHSTWWFALLIAFMIKMPLYGL 212
Cdd:PRK08667 151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL------SPLGASAGILSLVFLLLFLGFGIKAGIIPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLnpLSKTLSYPF------MTMALWGVVMTssicLRQTDLKSLI 286
Cdd:PRK08667 225 HKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDV--LSPELWWGVlillagSISALLGVIYA----LKEHDLKGLL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 287 AYSSVSHMGLVIAAALTQTQWSYTGAITLM-----------IAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLM 355
Cdd:PRK08667 299 AYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYT 378
|
330 340 350
....*....|....*....|....*....|.
gi 84488646 356 GLWWLLASLTNMALPPTINLMGELTIITSLF 386
Cdd:PRK08667 379 SALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
75-416 |
6.44e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 73.65 E-value: 6.44e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 75 LMILASQNHLTTEPISRkrtftatiiFLQISLILAFSATELIM------FFITFETTLIpTLIIITRWGNQMERLNAGTY 148
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDK---------YAMLFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 149 FLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTwwFALLI-AFMIKMPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVG--LALLIfGLAVEAELFPLNAWAPDAYQAAPHPI 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 228 SMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPFM--TMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQT 305
Cdd:PRK08377 241 TVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGT 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 306 QWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSL 385
Cdd:PRK08377 321 QAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAG 400
|
330 340 350
....*....|....*....|....*....|.
gi 84488646 386 FNWSNTTILMTGLGMLITATYTLFMLITTQW 416
Cdd:PRK08377 401 LSAGYTWPVALVLGASVVEAVYYFRLIHTMW 431
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-327 |
6.57e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 73.46 E-value: 6.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 56 LGVDRISAPLLTLSCWLT-PLMILASQNHLTT----EPISrkrTFTATIIFLQISLILAFSATELIMFFITFETTLIPTL 130
Cdd:PRK12665 72 LVVDRLSALMLVVSSVVLlAVLVYAIGQGIRDgdeeQPVS---IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 131 IIITRwGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTM-----QLNQPTMMTSWAhstwwfALLIAFMI 205
Cdd:PRK12665 149 VLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldELPSGTRTALFA------VLLVAFGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPlSKTLSYPFMTMALWGVVMTSSICLRQTDLKSL 285
Cdd:PRK12665 222 KAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 84488646 286 IAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLF 327
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
153-448 |
7.60e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 70.57 E-value: 7.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 153 TLIGSLPLLVALSYMQTQNGTLStYTMQLNQPTMMTSWAHSTW-WFALLIAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL 231
Cdd:COG1009 171 TRVGDLGLLLGILLLGAIAGTLN-FSELLAAAPTILSSPLLTLiLLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 232 -AAVLLKLGGYGIIRitmtLNPL---SKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQtqw 307
Cdd:COG1009 249 hAATMVKAGVYLLAR----LSPLfalSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG--- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 308 SYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFN 387
Cdd:COG1009 322 AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALE 401
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 84488646 388 WSNTTILMTGLGML---ITATYTLFMLITTQWGETpsymKAIPPTHTRE-HLLMTlhiLPMILLM 448
Cdd:COG1009 402 AGGLGPLLLAVALLgafLTAFYSFRLFFLVFFGKP----RPKTPKHPHEsPWLMT---LPLVVLA 459
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-451 |
7.40e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 67.47 E-value: 7.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 95 FTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTl 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT- 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 175 STYTMQLNQPTMMTSwahSTWWFALLIAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMT 249
Cdd:PRK12646 191 NNITEILGQADHIKN---HGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 250 LNpLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLV-----IAAALTQTQ---------WSYTGAITL 315
Cdd:PRK12646 267 LG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQqdaiasiyvFVLFAALFH 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 316 MIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSN----- 390
Cdd:PRK12646 346 LMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfs 425
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 84488646 391 --TTILMTGLGM---LITATYTLFMLITTQWGETPSymKAIPPTHTREHLLMTLHilPMILLMMKP 451
Cdd:PRK12646 426 liSMIIIVFIGViasIFTFTYALYMVKEVFWGKYDS--KVFTKKNIHEPWLFSLP--SLILMVLVP 487
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-424 |
2.05e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 65.61 E-value: 2.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 47 ELMIFSNHYLG--VDRISAPLLTLSCWLTPLMILASQNHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFET 124
Cdd:PRK06589 68 ELMDFGNYSIGlhLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYEL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 125 TLIPTLIIITrWGNQMERLNAGTYFLFYTLIGSLPLL---VALSYMQTQNGTLSTYTMQLNQPTMMTswahstwwFALLI 201
Cdd:PRK06589 148 LTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLFlpaVILIYTKTGNLDFVSGGLFSKNQSIIL--------LLMFI 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 202 AFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLNPLSKTLSYPFMT-----MALWGVVMTSSIC 276
Cdd:PRK06589 219 YGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFnwlifIPIVSIFYSSLKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 277 LRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMG 356
Cdd:PRK06589 299 LKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLIS 378
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 357 LWWLLASLTNMALPPTINLMGELTIITSLFNWSN--TTILMTGLGMLITATYTLFMLITTQWGETPSYMK 424
Cdd:PRK06589 379 FIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwLSIIVMLVVIASSILSALYLLKILSSIYKPSLSE 448
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-384 |
2.30e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.53 E-value: 2.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 137 GNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWL 216
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWL 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 217 PKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-----LNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 292 SHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:PRK12662 313 SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
250
....*....|...
gi 84488646 372 TINLMGELTIITS 384
Cdd:PRK12662 393 TSGFVAKWYILDA 405
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-371 |
3.59e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 65.29 E-value: 3.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 145 AGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQlNQPtmmtswaHSTWW----FAL-LIAFMIKMPLYGLHLWLPKA 219
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR-AAH-------LSPFWaslvFLLaLFGFGAKAGLVPLHVWLPRA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 220 HVEAPIAGSMILAAVLLKLGGYGIIRITMT-LNPLSKTLSYPFMTM----ALWGVVMTssicLRQTDLKSLIAYSSVSHM 294
Cdd:PRK06521 237 HPAAPSHVSALMSGVMLKVAIYGILRVVFDlLGAPGWWWGVLVLALgaisAVLGVLYA----LAEHDLKRLLAYSTIENI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 295 GLVI----------------AAALtqtqwSYTGAITLMIAHGLTSSMLFCLANTNYERTHSR----MLFLTRNMqlllPL 354
Cdd:PRK06521 313 GIIFvglglamvfiaygmplLAAL-----ALTAALYHLLNHALFKSLLFLGAGAVLHATGTRdmekLGGLIRRM----PW 383
|
250
....*....|....*..
gi 84488646 355 MGLWWLLASLTNMALPP 371
Cdd:PRK06521 384 TAWAFLIGCLAISALPP 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
99-452 |
3.92e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.89 E-value: 3.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 99 IIFLQISLILAFSATELIMFFITFETTLIPTLIIITrWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTL--ST 176
Cdd:PRK12663 114 ILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLnmAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 177 YTMQLNQ----PTMMTSWAhstwwfALLIAFMIKMPLYGLHlWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRI-TMTLN 251
Cdd:PRK12663 193 IAMRLNDmgdtATLTTIAL------LFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVfTLLFP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 252 PLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLAN 331
Cdd:PRK12663 266 QERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAG 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 332 TNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGMLITATYTLF-M 410
Cdd:PRK12663 346 SLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFrI 425
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 84488646 411 LITTQWGETPSYMKAIPPTHTREHLLMTLHILPMILLMMKPE 452
Cdd:PRK12663 426 FFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAE 467
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
105-401 |
4.12e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.86 E-value: 4.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 105 SLILAFSAT--------ELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLST 176
Cdd:PRK12647 99 SYILLFMASmlglvlsdNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 177 YTMqLNQPTMMTSwahSTWWFALLIAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRitmtLN 251
Cdd:PRK12647 179 SEL-LASGDVIRE---HPLYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LN 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 252 P-LSKTLSYpFMTMALWGV---VMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLF 327
Cdd:PRK12647 250 PvLGGTPLW-QTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALF 328
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488646 328 CLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNTTILMTGLGML 401
Cdd:PRK12647 329 MVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-447 |
1.23e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 60.35 E-value: 1.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 59 DRISAPLLTLSCWLTPLMILASqnHLTTEPISRKRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGN 138
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYS--FQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGT 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 139 QMERLNAGTYFLFyTLIGSLPLLVALSYMQTQNGTL-----STYTMQLN--QPTMMTSWAhstwwFALLIAFMIKMPLYG 211
Cdd:PRK07691 154 KIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLnmadiSVKIAELSagQTGLITVVA-----ILFLFVFATKAGLFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRI-TMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK07691 228 LYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 291 VSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLfltRNMQLLL---PLMGLWWLLASLTNM 367
Cdd:PRK07691 308 MIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDL---KKMGGLIkryPVLGWMFFIAALSLA 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 368 ALPPTINLMGELTIITSLFNWSNTTILMTGL-GMLITATYTLFMLITTQWGETpsymKAIPPTHTREHLLMTLHILPMIL 446
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLlSSLLVLYSVIKIFLKGFWGEP----KGYDLNNKVPVKKLLLPAVVLVA 460
|
.
gi 84488646 447 L 447
Cdd:PRK07691 461 I 461
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-447 |
2.27e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 59.34 E-value: 2.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 95 FTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTL 174
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 175 S----TYTMQLNqPTMMTSWAhstwwFALLIA-FMIKMPLYGLHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGIIRITM 248
Cdd:PRK08376 203 NmaylAVKMSEN-PTVVAKIA-----LALFIAgLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLF 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 249 TLNPLS---KTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVI------AAALTQTQWSYTGAITL---- 315
Cdd:PRK08376 275 SIYGPAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEIALaggi 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 316 --MIAHGLTSSMLFCLANTNYERTHSRMLF----LTRNMqlllPLMGLWWLLASLTNMALPPTINLMGELTIITS--LFN 387
Cdd:PRK08376 355 yhIVNHALYKALLFLTAGAVIYETGTRNLNelggLARTM----PKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFN 430
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 388 WSNTTILMTGlGMLITATYTLFMLITTQWGETPSYMKAIPPThtrehllmTLHILPMILL 447
Cdd:PRK08376 431 PILGVIAMIG-SVLTLASFVKVFHTAFFGPPSEKVMNVKEPP--------KPMLVPMLIL 481
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
148-327 |
9.11e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 54.52 E-value: 9.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 148 YFLFYTLIGSLpLLVALSYMQTQNGTLSTytmqlnqpTMMTSWAHSTWWFALlIAFMIKMPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAF--------GAIAGLGGTAAWLIL-IGFGVNAAFPPLHAWLPDAYPEATVTG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 228 SMILAAVLLKLGGYGIIRitmtLNPLSKTLSYPFMTMALWGVVMTssicLRQTDLKSLIAYSSVSHMGLVIAAALTQTQW 307
Cdd:PRK12668 218 SVFLSAFTTKTAVYALAR----AFPGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTAL 289
|
170 180
....*....|....*....|
gi 84488646 308 SYTGAITLMIAHGLTSSMLF 327
Cdd:PRK12668 290 AINGAVAHAFNHILYKGLLF 309
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
1.06e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 54.06 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 155 IGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMTSwahSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLG---SDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 235 LLKLGGYGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGL--------VIAAALTQTQ 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIillglgagVTGIALEQPA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 307 W---SYTGAITLMIAHGLTSSMLFCLANTNYERTHSRMLFLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIT 383
Cdd:PRK08042 302 LialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 84488646 384 SLFNWSNTTILMTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-402 |
1.80e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 53.32 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 199 LLIAFMIKMPLYGLHLWLPKAHVEA--PIAGsmiLAAVLLKLGGYGIIRITMTLNPLSKTLSYPFMTMALWGVVMTSSIC 276
Cdd:PRK12666 216 LLVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 277 -----LRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTnYERTHSR---MLFLTRNM 348
Cdd:PRK12666 293 gaigvLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAaadRLAVTPEL 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 84488646 349 QLLLP---------------LMGLWWLLASLTNMALPPTINLMGELTIITSLFN--------WSNTTILMTGLGMLI 402
Cdd:PRK12666 372 YDLDEeeeeevgvaipatmaLLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
49-323 |
3.52e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 52.43 E-value: 3.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 49 MIFSNHYLgVDRISAPLLTLSCWLTPLMILASQNHLTTEPISRkRTFTATIIFLQISLILAFSATELIMFFITFETTLIP 128
Cdd:COG1007 60 TAFGGMFV-VDGFALFFKLLILLAALLVLLLSRDYLERRGLLR-GEFYALLLFATLGMMLMASANDLLTLFLGLELLSLS 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 129 TLIIITRWGNQMERLNAGT-YFLFYTLIGSLPLL-VALSYMQTQNGTLSTYTMQLNQPTMMTSWAhstwWFAL---LIAF 203
Cdd:COG1007 138 LYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLYGATGSLNLAGIAAALAAGGANSPLL----LLGLvlvLAGL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 204 MIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLGGYGI-IRITMT-LNPLSKTLSYPFMTMA----LWGVVMTssicL 277
Cdd:COG1007 214 AFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAvlsmTVGNLAA----L 288
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 84488646 278 RQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTS 323
Cdd:COG1007 289 AQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
92-386 |
1.07e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.94 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 92 KRTFTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMErlnAGTYFLFYTLIGSLPLLVALSYMQTQN 171
Cdd:PRK06459 71 GKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIIS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 172 GTLSTYTMQLNQPTMMTSwahstwwfallIAFMIKMPLYGLHL--WLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT 249
Cdd:PRK06459 148 GTTNFSYLPSPVPLILAS-----------FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTIL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 250 LNPLSKT-LSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAA----ALTQTQWSYTGAITLM------IA 318
Cdd:PRK06459 217 TQTIPIGyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVAlglyMVTKQLITSIEHFSLItvilysFA 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488646 319 HGLTSSMLFCLANTNYERTHSRMlfltRNMQLLLPLMGLWWLLASLTnmALPPTINLMGELTIITSLF 386
Cdd:PRK06459 297 HSVAKTGLFLSSGLQEKQSITYS----KKIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
112-327 |
3.33e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.54 E-value: 3.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 112 ATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTmmtSWA 191
Cdd:PRK12644 125 SDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPT---GPA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 192 HSTWWFALLIAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITmtlNPLSKTLSYPFMTMALWGVV 270
Cdd:PRK12644 202 VSVAVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA---PGFADVPVWRPTVLVLGLAT 277
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488646 271 MTSS--ICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLF 327
Cdd:PRK12644 278 MLLGgwRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
106-370 |
4.47e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.92 E-value: 4.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 106 LILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTL---STYTMQLN 182
Cdd:MTH00020 124 MVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLdfsSVFNMVVS 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 183 QPTMMTSWAhstwWFALLIAFMIKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRITmtlnPLSKTLSYPF 261
Cdd:MTH00020 204 APSSDITLI----CLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSS----PLFEQAPLAL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 262 MTMALWG---VVMTSSICLRQTDLKSLIAYSSVSHMG-LVIAAALTQtqwsYTGAITLMIAHGLTSSMLFCLANT----- 332
Cdd:MTH00020 275 IIVTIVGsltVFFAATVGLVQNDLKKVIAYSTCSQLGyMVVACGLSH----YSISLFHLMNHAFFKALLFLSAGSvihal 350
|
250 260 270
....*....|....*....|....*....|....*...
gi 84488646 333 NYERTHSRMLFLTRnmqlLLPLMGLWWLLASLTNMALP 370
Cdd:MTH00020 351 SDEQDMRKMGGLIS----FLPLTYIFFLIGSLSLMGFP 384
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
199-323 |
7.54e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.28 E-value: 7.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 199 LLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLGGYGII-RITMT-LNPLSKTLSYPFMTMALWGVVMTSSIC 276
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAA 288
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 84488646 277 LRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-327 |
1.80e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 46.87 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 95 FTATIIFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGtyfLFYTLIGSLP---LLVALSYMQTQN 171
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAG---LKYFILGAFSsglLLFGISLIYGFT 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 172 GTLSTYTMQLNQPTMM-TSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT- 249
Cdd:TIGR01770 181 GSLNFEDLLLFLSNGMlNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYi 260
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488646 250 LNPLSKTLSYPFMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLF 327
Cdd:TIGR01770 261 LFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
101-298 |
5.07e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.41 E-value: 5.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 101 FLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAG-TYFLFYTLIGSLPLL-VALSYMQTQNGTLSTYT 178
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFgCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 179 MQLNQPTMMTSWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPiagsMILAAVLLKLGGYGIIRITMTLNPLSKTLs 258
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNIL- 155
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 84488646 259 ypfMTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVI 298
Cdd:MTH00196 156 ---LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVL 192
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-294 |
6.61e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.59 E-value: 6.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 93 RTFTATIIFLQISLILAFSATElIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNT-IQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 173 TLSTYTMqLNQPTMMTSWAHSTWWFALLIAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRIt 247
Cdd:PRK12649 191 TYDIATI-LQDSELIENIKGHPLFLITLILIFIgaaaKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARI- 267
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 84488646 248 mtlNPLSKTLSYPFMTMALWGV---VMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK12649 268 ---HPIFSGTEAWFILVSGTGMitmVLAGFLAFRQTDIKAILAYSTISQL 314
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
186-410 |
2.71e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.95 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 186 MMTSWAHSTWWFA--LLIAFMIKMPLYGLHLWLPkahveaPIAGSMILAAVLLKLGGYGIIRITMTLNPL-SKTLSYPFM 262
Cdd:MTH00144 75 LIMYNLSFSWFSMslLLLGLCLKLGLFPFHFWVP------SVMAGLSWLSCFLLLTWQKVAPLFLLSNFLdLYWLAYLLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 263 TMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALtqtqWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRML 342
Cdd:MTH00144 149 VISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLG 224
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84488646 343 fltrnMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNT-TILMTGLGMLITATYTLFM 410
Cdd:MTH00144 225 -----SLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLISLFFYLSV 288
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
95-300 |
4.77e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 42.65 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 95 FTATIIFLQISLILAfSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLV--ALSYMQTQNG 172
Cdd:MTH00208 141 FRLLIIFLLNMLILT-SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILflSLSLINFNSW 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 173 TLSTYTMQLNQPTMMTSWAhstwWFALLIAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygIIR 245
Cdd:MTH00208 220 NLNEILSLNNSNSFLINIL----LFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIR 288
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 84488646 246 ITMTLNPLSKTLSYPFMTMALwGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSL-TALFAASTAISQHDIKKIIAYSTTSQLGLMVVA 342
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
115-299 |
6.48e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 42.22 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 115 LIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQLNQPTMMtswAHST 194
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQ---NSPL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 195 WWFAL---LIAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITmtlnPLSKTLSYPFMTMALWGVV 270
Cdd:PRK12645 209 FIPAMiliLLGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLI 283
|
170 180 190
....*....|....*....|....*....|..
gi 84488646 271 M---TSSICLRQTDLKSLIAYSSVSHMGLVIA 299
Cdd:PRK12645 284 TlfwGSLNAVKQTDLKGILAFSTVSQLGLIMS 315
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
212-327 |
1.03e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.43 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 212 LHLWLPKAhVEAPIAGSMILAAVLLKLGGYGIIRIT--MTLNPLSKTlsypfmTMALWGVV---MTSSICLRQTDLKSLI 286
Cdd:PRK07390 240 LHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQpvLALSPVALT------VLIVIGTVtaiGASLVAIAQIDIKRAL 312
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 84488646 287 AYSSVSHMGLV-IAAALTQTQWsytgAITLMIAHGLTSSMLF 327
Cdd:PRK07390 313 SYSTSAYLGLVfIAVGLQQPDI----ALLLLLTHAIAKALLF 350
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
46-370 |
1.14e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.48 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 46 MELMIFSNHY-LGVDRISAPLLTLSCWLTPLMILASQNHLTTEP-ISRKRTFTATIIFLQISLIlafSATELIMFFITFE 123
Cdd:MTH00032 65 IESEIFITHIgLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 124 TTLIPTLIIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSYMQTQNGTLSTYTMQ---LNQPTMMTSWAHSTWWFA-- 198
Cdd:MTH00032 142 GVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESpl 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 199 ---------LLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITmtlnPLSKTLSYPFMTMALWGV 269
Cdd:MTH00032 222 apfaiigilLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGA 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 270 V---MTSSICLRQTDLKSLIAYSSVSHMGLVIaaALTQTQWSYTGAITLMIAHGLTSSMLFCLA-----NTNY-ERTHSR 340
Cdd:MTH00032 298 LtafFAATVGLVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVdEQDMRK 375
|
330 340 350
....*....|....*....|....*....|
gi 84488646 341 MLFLTRNMQLLLPLMglwwLLASLTNMALP 370
Cdd:MTH00032 376 MGGLIHSIPFTYTMM----LIGSFSIMGLP 401
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
196-327 |
2.35e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 196 WFALLIAF------MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRitmtLNPLSKTLSYPFMTMALWG 268
Cdd:PRK07376 224 WLALLLCIlvflgpMAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVAR----MYPVFEQFPAVMTVIAWTG 298
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84488646 269 VV---MTSSICLRQTDLKSLIAYSSVSHMG-LVIAAALTqtqwSYTGAITLMIAHGLTSSMLF 327
Cdd:PRK07376 299 AItafLGASIALTQNDIKKGLAYSTISQLGyMVMAMGCG----AYSAGLFHLMTHAYFKAMLF 357
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
3.99e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 262 MTMALWGVVMTSSICLRQTDLKSLIAYSSVSHMGLVIAAALTQTQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHSRM 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 84488646 342 LFLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
100-385 |
9.71e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 38.11 E-value: 9.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 100 IFLQISLILAFSATELIMFFITFETTLIPTLIIITRWGNQMERLNAGTYFLFYTlIGSLPLLVALSYMQTQNgtlstytm 179
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQE-FGSALLLMGGSLSFSNL-------- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 180 qlnqptmmtsWAHSTWWFALLIAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAaVLLKLGGYGIIritMTLNPLSKTLSY 259
Cdd:MTH00197 76 ----------YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLIL---AFNSSSFMGLLI 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488646 260 PFMTMALWGVVMTssicLRQTDLKSLIAYSSVSHMGLVIAAAltqtQWSYTGAITLMIAHGLTSSMLFCLANTNYERTHS 339
Cdd:MTH00197 142 CSVLSSLIGGIGG----MNQSNIRQLLAYSSIGHTGWMLMSL----VYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLN 213
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 84488646 340 RMLFLTRNMQLLLPLMGLWWLLASltnmALPPTINLMGELTIITSL 385
Cdd:MTH00197 214 QQYSNPESMSSNLVFLGLSFLSLG----GLPPLSGFFLKWLILTSL 255
|
|
| |
