NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|84488644|ref|YP_448836|]
View 

NADH dehydrogenase subunit 3 (mitochondrion) [Indotestudo elongata]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009571)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 4.46e-50

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 154.27  E-value: 4.46e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644    2 NMTISIMIISLTLSTILTTLNYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 84488644   82 LPHPTHSFTWAFIILALLGLGLIYEWAQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
 
Name Accession Description Interval E-value
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 4.46e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 154.27  E-value: 4.46e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644    2 NMTISIMIISLTLSTILTTLNYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 84488644   82 LPHPTHSFTWAFIILALLGLGLIYEWAQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
22-113 3.20e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 88.25  E-value: 3.20e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644    22 NYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PTHSFTWAFIILALLG 100
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAILL 81

                          90
                  ....*....|...
gi 84488644   101 LGLIYEWAQGGLE 113
Cdd:pfam00507  82 VGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 29-114 3.51e-19

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 75.93  E-value: 3.51e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644  29 KPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PTHSFTWAFIILALLGLGLIYEW 107
Cdd:COG0838  33 RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAILLVGLIYAW 110


                ....*..
gi 84488644 108 AQGGLEW 114
Cdd:COG0838 111 KKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 4.46e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 154.27  E-value: 4.46e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644    2 NMTISIMIISLTLSTILTTLNYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 84488644   82 LPHPTHSFTWAFIILALLGLGLIYEWAQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.01e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 153.54  E-value: 1.01e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644    1 MNMTISIMIISLTLSTILTTLNYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 84488644   81 QLPHPTHSFTWAFIILALLGLGLIYEWAQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 23-116 4.39e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 147.06  E-value: 4.39e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   23 YWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPTHSFTWAFIILALLGLG 102
Cdd:MTH00069  21 FWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLFWSTLILILLTLG 100

                         90
                 ....*....|....
gi 84488644  103 LIYEWAQGGLEWAE 116
Cdd:MTH00069 101 LIYEWIQGGLEWAE 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 33-116 2.41e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 122.36  E-value: 2.41e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   33 EKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPTHSFTWAFIILALLGLGLIYEWAQGGL 112
Cdd:MTH00106  32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                 ....
gi 84488644  113 EWAE 116
Cdd:MTH00106 112 EWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 30-116 3.75e-34

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 114.31  E-value: 3.75e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   30 PDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPTHSFTWAFIILALLGLGLIYEWAQ 109
Cdd:MTH00042  30 PDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVN 109


                 ....*..
gi 84488644  110 GGLEWAE 116
Cdd:MTH00042 110 GGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 4.71e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 111.14  E-value: 4.71e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644    1 MNMTISIMIISLTLSTILTTLNYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 84488644   81 QLphPTHSFTWAFIILALLGLGLIYEWAQGGLEW 114
Cdd:MTH00203  81 QL--SSLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 31-116 1.09e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 90.30  E-value: 1.09e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   31 DNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPTHSFTWAFIILALLGLGLIYEWAQG 110
Cdd:MTH00148  32 DREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEG 111


                 ....*.
gi 84488644  111 GLEWAE 116
Cdd:MTH00148 112 SLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
22-113 3.20e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 88.25  E-value: 3.20e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644    22 NYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PTHSFTWAFIILALLG 100
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAILL 81

                          90
                  ....*....|...
gi 84488644   101 LGLIYEWAQGGLE 113
Cdd:pfam00507  82 VGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 31-114 3.51e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 86.37  E-value: 3.51e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   31 DNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPTHSFTWAFIILALLGLGLIYEWAQG 110
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 84488644  111 GLEW 114
Cdd:MTH00161 110 ALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 31-116 1.15e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 82.35  E-value: 1.15e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   31 DNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPTHSFTWAFIILALLGLGLIYEWAQG 110
Cdd:MTH00202  32 DREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEG 111


                 ....*.
gi 84488644  111 GLEWAE 116
Cdd:MTH00202 112 SLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 23-114 1.19e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 80.14  E-value: 1.19e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   23 YWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPTHSFTWA-FIILALLGL 101
Cdd:MTH00055  27 YIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVmYLFLIILTI 104

                         90
                 ....*....|...
gi 84488644  102 GLIYEWAQGGLEW 114
Cdd:MTH00055 105 GLIYEWVKGGLEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 31-115 1.37e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.90  E-value: 1.37e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   31 DNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPTHSFTWAFIILALLGLGLIYEWAQG 110
Cdd:MTH00012  32 DREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREG 111


                 ....*
gi 84488644  111 GLEWA 115
Cdd:MTH00012 112 SLDWS 116
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 29-114 3.51e-19

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 75.93  E-value: 3.51e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644  29 KPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PTHSFTWAFIILALLGLGLIYEW 107
Cdd:COG0838  33 RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAILLVGLIYAW 110


                ....*..
gi 84488644 108 AQGGLEW 114
Cdd:COG0838 111 KKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 29-115 6.17e-19

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 75.67  E-value: 6.17e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   29 KPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPTH-SFTWAFIILALLGLGLIYEW 107
Cdd:PRK06602  36 APDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWlGFVEAMIFILVLLVGLVYLW 113


                 ....*...
gi 84488644  108 AQGGLEWA 115
Cdd:PRK06602 114 RKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 23-114 8.03e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 72.79  E-value: 8.03e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   23 YWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PTHSFTWAFIILALLGL 101
Cdd:MTH00018  22 YFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQiAPFGFWTMVGFLFILTL 99

                         90
                 ....*....|...
gi 84488644  102 GLIYEWAQGGLEW 114
Cdd:MTH00018 100 GLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 22-114 9.11e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 70.35  E-value: 9.11e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   22 NYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPT-HSFTWAFIILALLG 100
Cdd:MTH00030  31 NSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNlFSFWIVYTFLIVLA 108

                         90
                 ....*....|....
gi 84488644  101 LGLIYEWAQGGLEW 114
Cdd:MTH00030 109 IGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 29-114 9.29e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.98  E-value: 9.29e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   29 KPDNEKLTPYECGFDPMKSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWAIQLPH-PTHSFTWAFIILALLGLGLIY 105
Cdd:PRK07928  32 RYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAY 109


                 ....*....
gi 84488644  106 EWAQGGLEW 114
Cdd:PRK07928 110 VWRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 33-114 4.90e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.99  E-value: 4.90e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488644   33 EKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PTHSFTWAFIILALLGLGLIYEWAQGG 111
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVlGVSAFIEALIFVLILIVGLVYAWRKGA 116


                 ...
gi 84488644  112 LEW 114
Cdd:CHL00022 117 LEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
29-80 2.54e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 45.50  E-value: 2.54e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 84488644   29 KPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAI 80
Cdd:PRK07756  37 KPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFL--YPWAV 86
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-80 6.29e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 44.66  E-value: 6.29e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 84488644   34 KLTPYECGFDPMKSARlPFSIRFFLVAILFLLFDLEIALLlpLPWAI 80
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAV 90
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 22-74 1.00e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 43.73  E-value: 1.00e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 84488644   22 NYWITLIKPDNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092  22 NFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 31-77 3.59e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 3.59e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 84488644   31 DNEKLTPYECGFDPMKSARLPFSIRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060  34 GFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH