|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 696.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 81 QNHLQHEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 161 LISILHLHTWTGTLSLPILQLVHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 241 YGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVAT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 836643791 401 LLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMT 438
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 566.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 81 QNHLQHEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 161 LISILHLHTWTGTLSLPILQLVHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 241 YGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVAT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 836643791 401 LLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLA 438
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 560.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 81 QNHLQHEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 161 LISILHLHTWTGTLSLPILQLVHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 241 YGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVAT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 836643791 401 LLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMA 438
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
2.52e-162 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 465.97 E-value: 2.52e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWL-LPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 80 SQNHLQHEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 160 LLISILHLHTWTGTLSLPILQLVHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 240 GYGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 320 GLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|....*....
gi 836643791 400 TLLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMA 439
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-437 |
9.89e-153 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 441.30 E-value: 9.89e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 3 KIILPMIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWLL-PTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKwSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 82 NHLQHEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 162 ISILHLHTWTGTLSLPILQLVHPLltdSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 242 GIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|....*.
gi 836643791 402 LTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLM 437
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLL 433
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
1.53e-135 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 397.81 E-value: 1.53e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWLLPTYYPHKHLTNWT-GIDHISSPLLTLTCWLLPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSlATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 80 SQNHLQHEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 160 LLISILHLHTWTGTLSLPILQLVHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 240 GYGIMR-ITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMIS 318
Cdd:MTH00044 241 GYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGV 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 836643791 399 ATLLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIF 440
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
2.11e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 332.89 E-value: 2.11e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPPKFLWINttthSTLIASLSLQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQS----LLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 81 QNHLQHEPLARKRAFIAALVTIqpFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 161 LISILHLHTWTGTLSLPILQLVhplltdSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 241 YGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVAT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430
....*....|....*....|....*....|....*..
gi 836643791 401 LLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLM 437
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-437 |
3.69e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 311.00 E-value: 3.69e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 52 LTNWTGIDHISSPLLTLTCWLLPLMILASQNHLQHEPLARKRAFIAALVTIqpFIVLAFSATELTLFYIAFEATLIPTLI 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 132 LITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSWpglLSSLALLTAFMVKAPLYG 211
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 292 SHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPP 371
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 836643791 372 TTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLM 437
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-437 |
8.98e-100 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 305.90 E-value: 8.98e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPpKFLWINTTTHSTLIASLSLQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 81 QNHLQHEPLARkrAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 161 LISILHLHTWTGTLSLPILQLVHPLLtdsWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 241 YGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVAT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430
....*....|....*....|....*....|....*..
gi 836643791 401 LLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLM 437
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLM 431
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-438 |
8.09e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 298.43 E-value: 8.09e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 8 MIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWLLPTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILASQNHLQHE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 88 plARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHL 167
Cdd:MTH00205 85 --KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 168 HTWTGTLSLPILqlvHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT 247
Cdd:MTH00205 163 NSLNFSLSMFFN---FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 248 LMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLF 327
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 328 CLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYT 407
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420 430
....*....|....*....|....*....|.
gi 836643791 408 LFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLAISEREYYILI 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
1.45e-73 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 232.97 E-value: 1.45e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 112 ATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSWP 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 192 GLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFLTLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 272 TSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 836643791 351 LLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVAT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-438 |
1.53e-73 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 239.21 E-value: 1.53e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQNHLQHeplaRKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 137 GSqPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSWpGLLSSLALLTAFMVKAPLYGLHLWL 216
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTA-QLLLFLAFFIAFAVKVPMFPFHTWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPL-SNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG1008 233 PDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 296 LVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNL 375
Cdd:COG1008 313 FVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGF 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 836643791 376 MAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:COG1008 393 VGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLA 455
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
22-438 |
3.70e-62 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 209.67 E-value: 3.70e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 22 FLWINT-TTHSTLIASLSLQWLlPTYYPHKHLtnwtGIDHISSPLLTLTCWLLPLMILASQNHLQHeplaRKRAFIAALV 100
Cdd:PRK05846 48 VLWIGFdSSNAGFQFVEKHPWI-PRFGISYHL----GVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 101 TIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLISILHLHTW----TGTLSL 176
Cdd:PRK05846 119 WLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 177 PILqLVHPLltDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNH 256
Cdd:PRK05846 198 ADL-LNLPL--PPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASH 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 257 LHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK05846 275 EFAPIIiTLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYD 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 336 RTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLTTQ 415
Cdd:PRK05846 355 RLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVM 434
|
410 420
....*....|....*....|...
gi 836643791 416 RGALPPYLTSIQNSSTREHLLMA 438
Cdd:PRK05846 435 FGPVKNEVAKLKDLNGRELLILL 457
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-411 |
6.97e-61 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 205.94 E-value: 6.97e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQNHLQHeplaRKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 137 GSqPERLSAGIYLLFYTLISSLPLLISILHLHTWTG-TLSLPIL-QLVHPLLTDSWpgllSSLALLTAFMVKAPLYGLHL 214
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELlNLPLPFGVQTW----LFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTP-LSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 294 MGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTT 373
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 836643791 374 NLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFML 411
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-438 |
1.46e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 202.60 E-value: 1.46e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQNHLQHeplaRKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 137 GSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVH-PLLTDSWpgllSSLALLTAFMVKAPLYGLHLW 215
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKlPLSIQKW----LLVGFFLSLAVKIPQIPFHIW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFLTL-----ALWGALMTSsiclRQTDLKSLIAYSS 290
Cdd:MTH00204 232 LPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 291 VSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALP 370
Cdd:MTH00204 308 VAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 836643791 371 PTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00204 388 LSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAIL 455
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
3.14e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 188.34 E-value: 3.14e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQNHLQHeplaRKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 137 GSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLpilQLVHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWL 216
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPF-LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:MTH00217 230 PQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 296 LVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNL 375
Cdd:MTH00217 310 LVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
330 340 350
....*....|....*....|....*....|....*
gi 836643791 376 MAELTIMIALFHWSAPTIILTGVATLLTASYTLFM 410
Cdd:MTH00217 390 VGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-438 |
8.40e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 179.73 E-value: 8.40e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 58 IDHISSPLLTLTCWLLPLMILASQNHLQHeplaRKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWG 137
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 138 SQPERLSAGIYLLFYTLISSLPLLI---SILHLHTWTGTLSLPILQLVHPLLTDSWpgllSSLALLTAFMVKAPLYGLHL 214
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLclfSLYNIHGTTDYLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPL-SNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 294 MGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTT 373
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 836643791 374 NLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLTTQRGALPPYLTSIQNSSTREHLLMA 438
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITA 476
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
105-412 |
5.20e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 164.31 E-value: 5.20e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 105 FIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHlhtwtgtlSLPILQLVHP 184
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 185 LLTDSWpglLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLhypFLTL 264
Cdd:MTH00094 146 DFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 265 ALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 836643791 345 TRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLL 412
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-433 |
2.35e-40 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 150.95 E-value: 2.35e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 54 NWT-GIDHISSPLLTLTCWLLPLMILASQNhLQHEPlarkRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLIL 132
Cdd:PRK12561 52 EWSlGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 133 ITRWGSQpERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHplltDSWPGLLSSLA---LLTAFMVKAPL 209
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGA----KSYPLALELLLyagFLIAFGVKLPI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 210 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPlSNHLHYPFLTLAL------WGALMTssicLRQTDLK 283
Cdd:PRK12561 202 FPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLP-DAHVYFAPALAILgvvniiYGALNA----FAQDNVK 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 284 SLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLAN 363
Cdd:PRK12561 277 RRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASS 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 364 LTNMALPPTTNLMAELTIMIALFH-------WSAPTIILTGVATLLTASYTLFML---LTTQRGALPPYLTSIQNSSTRE 433
Cdd:PRK12561 357 MASLALPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSMLrrvFYGPRSELLPALAVVEDAKPRE 436
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-402 |
5.03e-36 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 137.59 E-value: 5.03e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 58 IDHISSPLLTLTCWLLPLMILASQNHLQHEplARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 138 SQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLtDSWPGLLSSLALLTAFMVKAPLYGLHLWLP 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL-DPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRI--TLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVltLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 296 LVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350
....*....|....*....|....*....|.
gi 836643791 376 MAELTIMIALFH----WSAPTIILTGVATLL 402
Cdd:COG0651 390 VSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-426 |
2.15e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 134.44 E-value: 2.15e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQNHLQheplaRKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 137 GSQpERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPIlqlvHPLLTDSWP---GLLSSLALLTAFMVKAPLYGLH 213
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDY----EPLRSHTLPlstQLLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVS 292
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 293 HMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPLLPLMALWWLLANLTNMAL 369
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 836643791 370 PPTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLTTQRGALPPYLTSI 426
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-411 |
8.11e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 124.43 E-value: 8.11e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 54 NWT-GIDHISSPLLTLTCWLLPLMILASQnhlqhePLARK-RAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLI 131
Cdd:PRK02546 80 TWSvGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 132 LITRWGSQpERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSWPgLLSSLALLTAFMVKAPLYG 211
Cdd:PRK02546 154 LLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVP 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK02546 232 LHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 291 VSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALP 370
Cdd:PRK02546 312 ISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 836643791 371 PTTNLMAELTIMIAL-------FHWSAPTIILTGVATLLTASYTLFML 411
Cdd:PRK02546 392 GMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-419 |
6.69e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 115.96 E-value: 6.69e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQnhlqhEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 137 GSQpERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSwPGLLSSLALLTAFMVKAPLYGLHLWL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPflTLALWGA---LMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 294 MGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMALWWLLANLTNMALP 370
Cdd:PRK07363 307 MGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIP 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 836643791 371 PTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLTTQRGAL 419
Cdd:PRK07363 387 GLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
2.98e-25 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 108.11 E-value: 2.98e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQnhlqhePLARK-RAFIaalvtiqpFIVLA--------FSATELTLFYIAFEATLI 127
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFY--------FLMLAmysgqiglFSSRDLLLFFIMWELELI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 128 PTLILITRWGSQpERLSAGIYLLFYTLISSLPLLISILhlhtwtgTLSL-----PILQLvHPLLTDSWPGLLSSLAL--- 199
Cdd:CHL00011 147 PVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL-------GMGLygsnePTLNF-ETLANQSYPVALEILFYigf 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 200 LTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPlsnHLHYPFLT-LALWGALM---TSSI 275
Cdd:CHL00011 218 LIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLP---HAHSIFSPwLVIVGAIQiiyAAST 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 276 CLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLM 355
Cdd:CHL00011 295 SLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKI 374
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 836643791 356 ALWWLLANLTNMALPPTTNLMAELT----IMIALFHWSAPTIILT---GVATLLTASYTLFML 411
Cdd:CHL00011 375 FTMFSSFSMASLALPGMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTPIYLLSML 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
3.31e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 96.44 E-value: 3.31e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 1 MLKIILPMIMLLPTTLLSPPKFLWINTTTHSTLIASLSLQWLL-PTYYPHKHLTNWTGIDHISSPLLTLTCWLLPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 836643791 80 SQNHLQHEPLARKRAFIAALVTIQPFIVLA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
122-409 |
4.24e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 86.56 E-value: 4.24e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 122 FEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQL----------VHPLLTDSWP 191
Cdd:PRK12667 142 LEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLA 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 192 GLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-------TLMTTPLSNHLHYPFLTL 264
Cdd:PRK12667 222 LGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIIL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 265 ALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:PRK12667 302 GAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDE 381
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 836643791 345 TRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSaptIILTGVATLLTASYTLF 409
Cdd:PRK12667 382 LAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLV 443
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-406 |
6.14e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 86.09 E-value: 6.14e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 109 AFSATELTLFYIAFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPlltD 188
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA---E 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 189 SWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITL----MTTPLSNHLHYPFLTL 264
Cdd:PRK08375 198 NPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVL 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 265 ALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:PRK08375 278 ALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSE 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 836643791 345 TRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFH-WSAPTIILTGVATLLTASY 406
Cdd:PRK08375 358 LSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-409 |
3.18e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 77.68 E-value: 3.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 90 ARKRAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPLLISILHLHT 169
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 170 WTGTLSLPILQLVHPLltdswpgllSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLM 249
Cdd:PRK07234 170 ANGTFAFSGLATADPE---------AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 250 ttplSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIqtswsfsgAMILMISHGLTSSMLFCL 329
Cdd:PRK07234 241 ----VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 330 ANTNYERTHSRILLLTRGLQPLLPLmalwwLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLF 409
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAASFWKFIF 383
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-386 |
9.98e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 76.31 E-value: 9.98e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 57 GIDHISSPLLTLTCWLLPLMILASQNHLQHEPLARKRAFIAALVTIQPFIVLAFSATELTLFYIAF-EATLIPTLILITR 135
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFwEIMALSSFFLVMN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 136 WGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSWpgllssLALLTAFMVKAPLYGLHLW 215
Cdd:PRK08667 154 DYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRItlMTTPLSNHLHYPFLTLAL--WGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK08667 228 LPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIEN 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 294 MGLV-----------VAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLA 362
Cdd:PRK08667 306 IGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|....
gi 836643791 363 NLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-413 |
9.67e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.96 E-value: 9.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMT--TPLSNHLHYPFLTLALWGALMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 284 SLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLAN 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 836643791 364 LTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATLLTASYTLFMLLT 413
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVA 436
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-403 |
2.92e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 65.37 E-value: 2.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 108 LAFSATELTLFYIAFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLvhpLLT 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAV---RLD 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 188 DSWPGLLSSLALLTA--FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TLMTTplsnhlHYPFLTL 264
Cdd:PRK12665 202 ELPSGTRTALFAVLLvaFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRThTLLFP------GGGLDTL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 265 ALWGALMTSSI----CLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSR 340
Cdd:PRK12665 276 LMVVALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSS 355
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 836643791 341 ILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIM---IALFHWSAPTIILTGVAT-LLT 403
Cdd:PRK12665 356 SLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagAEDGTWLAWALVAGGVVTsLLT 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-414 |
1.05e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 63.62 E-value: 1.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 93 RAFIAALVTIQPFIVLAFSATELTLFYIAFEATLIPTLILITRWGSQpERLSAGIYLLFYTLISSLPLLISILHLHTWT- 171
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSLTr 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 172 -----GTLSLPILQLVHPLLTDSWPGLLSSLALLTaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI 246
Cdd:PRK08676 181 qalgtGTLNWTELAAHASLLSPSVLGASFLFIFIG-FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 247 T--LMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSS 324
Cdd:PRK08676 260 SalLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKS 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 325 MLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATLLTA 404
Cdd:PRK08676 340 GLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAA 419
|
330
....*....|
gi 836643791 405 SYTLFMLLTT 414
Cdd:PRK08676 420 SSFAIFLLKA 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
94-407 |
2.81e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 62.75 E-value: 2.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 94 AFIAALVTIqpfiVLAfsaTELTLFYIAFEATLIPTLILITRWGSQPErlSAGIYLLFYTLISSLPLLISILHLHTWTGT 173
Cdd:PRK12650 118 AFMAAMLLL----VLA---DDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 174 LSLPILqlvhpLLTDSWPGLLSSLALLTAFMV-----KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT- 247
Cdd:PRK12650 189 TSLSGI-----LHSDVWAEKPGLTTVVAVLIAvaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSp 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 248 -LMTTPLSNHLhypFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSML 326
Cdd:PRK12650 264 vFHDVAVWNWL---LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 327 FCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFH--WSAPTIILTGVATLLTA 404
Cdd:PRK12650 341 FMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEapGGNAGVVLLLVGAALGA 420
|
...
gi 836643791 405 SYT 407
Cdd:PRK12650 421 VFT 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-401 |
4.08e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.86 E-value: 4.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 213 HLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITlmttPLSNHLHYPFLTLALWGA---LMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARLN----PVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 289 SSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 836643791 369 LPPTTNLMAELTIMIALFHWSAPTIILTGVATL 401
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-412 |
4.66e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 61.37 E-value: 4.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 99 LVTIQPFIVLAFSATELTLFyIAFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPL-LISILHLHTWTGTLSLP 177
Cdd:PRK06589 123 NLTILIGVLIALSSDLFTMF-VCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFV 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 178 ILQLVhplltdSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSN-- 255
Cdd:PRK06589 201 SGGLF------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYlq 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 256 ---HLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANT 332
Cdd:PRK06589 275 rifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGS 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 333 NYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPT--IILTGVATLLTASYTLFM 410
Cdd:PRK06589 355 IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYL 434
|
..
gi 836643791 411 LL 412
Cdd:PRK06589 435 LK 436
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
105-386 |
1.26e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 59.94 E-value: 1.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 105 FIVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSlpilqlVHP 184
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN------FSD 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 185 LLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFLTL 264
Cdd:MTH00062 157 WGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 265 ALWGALMTSSICLrqtDLKSLIAYSSVSHMglVVAASMIQTSWSFSGAMILMIS--HGLTSSMLFCLANTNYERTHSRIL 342
Cdd:MTH00062 237 FSVFFLITACSEL---DGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNW 311
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 836643791 343 LLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALF 386
Cdd:MTH00062 312 VLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSF 355
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
1.92e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 59.62 E-value: 1.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 110 FSATELTLFYIAFEATLIPTLILITRwGSQPERLSAGIYLLFyTLISSLPLLISILHLHTWTGTLSlpILQLVHPLLTDS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFD--FADISQGLINDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 190 WPGLLSSLALLTAFM--VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI--TLMTTPLSNHL-------- 257
Cdd:PRK08668 191 STGFALIVFLFLLAFgvAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVlyVLPGTKLFSEFgtyrgvpl 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 836643791 258 -HYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLF 327
Cdd:PRK08668 271 fNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
117-414 |
2.41e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 2.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 117 LFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLP-ILQLVHPLLTDSWPGLLS 195
Cdd:PRK12646 134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGLFIPMI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 196 SLALLTAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITLMTTpLSNHLHYPFLTLALWGALMTSS 274
Cdd:PRK12646 214 FMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 275 ICLRQTDLKSLIAYSSVSHMGLVVaaSMI--------QTSWSFS--------GAMILMISHGLTSSMLFCLANTNYERTH 338
Cdd:PRK12646 291 TALKQWDLKGILAYSTISQLGMIM--AMVgigggyaqHQQDAIAsiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHEAG 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 339 SRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWS-------APTIILTGV---ATLLTASYTL 408
Cdd:PRK12646 369 TRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslISMIIIVFIgviASIFTFTYAL 448
|
....*.
gi 836643791 409 FMLLTT 414
Cdd:PRK12646 449 YMVKEV 454
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-384 |
3.38e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.59 E-value: 3.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 119 YIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTlISSLPLLISILHLHTWTGTLSLP-ILQLVHPLLTDSWPGLLSSL 197
Cdd:PRK12662 136 YVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYLIGIGFLYAITGTLNMGdMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 198 ALLTAFmVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI---------TLMTTPLSNhlhyPFLTLALWG 268
Cdd:PRK12662 215 IMVGLF-IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkanfVFTTLPFNN----VFMILAALA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 269 ALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLlt 345
Cdd:PRK12662 290 IVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL-- 367
|
250 260 270
....*....|....*....|....*....|....*....
gi 836643791 346 rGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIA 384
Cdd:PRK12662 368 -NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-406 |
1.57e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 56.70 E-value: 1.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI--TLMTTPLSNHLHYPFLTLALWGALMTSSICLRQT 280
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARIlyLMQNANGWSSVLKLVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 281 DLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWL 360
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 836643791 361 LANLTNMALPPTTNLMAELTIMIALFH--WSAPTIILTGvATLLTASY 406
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAGLSagYTWPVALVLG-ASVVEAVY 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
262-414 |
1.09e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.00 E-value: 1.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 262 LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQtswSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 836643791 342 LLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPTIILTGVATL---LTASYTLFMLLTT 414
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLV 431
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-401 |
2.94e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 52.64 E-value: 2.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 109 AFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGIYLLFyTLISSLPLLISILHLHTWTGTLSLPIL--QLVHPLL 186
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADIsvKIAELSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 187 TDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TLMTTPLSNHLHYPFLTLA 265
Cdd:PRK07691 203 GQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 266 LWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLT 345
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKM 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 346 RGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALF----HWSAPTIILTGVATL 401
Cdd:PRK07691 363 GGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFeagfYVSGIIVLLSSLLVL 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
119-402 |
4.64e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.87 E-value: 4.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 119 YIAFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSWPGLLSSLA 198
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 199 LLTAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSI-CL 277
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALgAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 278 RQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAL 357
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 836643791 358 WWLLANLTNMALPPTTNLMAELTIMIALF----HWSAPTIILTGVATLL 402
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQGALdngaYILLALMLITSLITMY 420
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
83-402 |
7.94e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 51.13 E-value: 7.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 83 HLQHEPLARKRAFIaaLVTIQPFIVLAFSATELTLFyIAFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLI 162
Cdd:PRK06525 106 HPVHEGTGRYYAFL--LLFIGAMAGLVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 163 SILHLHTWTGTLSLPILQLVHPLLTDswpglLSSLALLTAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAall 235
Cdd:PRK06525 182 AAATLFLQTGTFALSALSGLHGSLKY-----LVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV--- 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 236 lklGGYGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAA---SMIQTSWSFSGA 312
Cdd:PRK06525 253 ---GVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGlslAILGSRLALEGS 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 313 MILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFHWSAPT 392
Cdd:PRK06525 330 IAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEY 409
|
330
....*....|
gi 836643791 393 IILTGVATLL 402
Cdd:PRK06525 410 WILLPAMVLL 419
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-386 |
9.23e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 51.43 E-value: 9.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT--LMTTPLSnHLHYPFLTLALWGALMTSSICLRQT 280
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVfdLLGAPGW-WWGVLVLALGAISAVLGVLYALAEH 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 281 DLKSLIAYSSVSHMGLVVAA---SMI--------QTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQ 349
Cdd:PRK06521 299 DLKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLI 378
|
170 180 190
....*....|....*....|....*....|....*..
gi 836643791 350 PLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK06521 379 RRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-407 |
1.44e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 50.48 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 118 FYIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQlVHPLLTDSWPGLLSSL 197
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLA-VKMSENPTVVAKIALA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 198 ALLTAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRI--TLMTTPLS-NHLHYPFLTLALWGALMTSS 274
Cdd:PRK08376 225 LFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVlfSIYGPAINlATVGWVIIILGCLTMFVGVA 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 275 ICLRQTDLKSLIAYSSVSHMG---------LVVAASMIQTSWSF---SGAMILMISHGLTSSMLFCLANTNYERTHSRIL 342
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETGTRNL 383
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 836643791 343 LLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIM--IALFHwSAPTIILTGVATLLTASYT 407
Cdd:PRK08376 384 NELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN-PILGVIAMIGSVLTLASFV 449
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
106-380 |
2.30e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.88 E-value: 2.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 106 IVLAFSATELTLFyIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQ---LV 182
Cdd:MTH00032 125 MVLVTSDNYLQLF-IGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVG 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 183 HPLLTDSWPGLLSSLALLTAFMV-----------KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMritLMTT 251
Cdd:MTH00032 204 SGIMDRGYYGGGAYESPLAPFAIigillligcigKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM---IRSF 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 252 PLSNHLHYPFLTLALWGAL---MTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSgaMILMISHGLTSSMLFC 328
Cdd:MTH00032 280 PLFEKAPLTLLIITIFGALtafFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVG--LFHLVNHAFFKALLFL 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 836643791 329 LA-----NTNYERTHSRILlltRGLQPLLPLMALWWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 358 SAgsvihSTTVDEQDMRKM---GGLIHSIPFTYTMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
257-371 |
3.24e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.18 E-value: 3.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 257 LHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYER 336
Cdd:PRK06277 265 AQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYR 344
|
90 100 110
....*....|....*....|....*....|....*
gi 836643791 337 THSRILLLTRGLQPLLPLMALWWLLANLTNMALPP 371
Cdd:PRK06277 345 TKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
106-398 |
6.20e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 45.32 E-value: 6.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 106 IVLAFSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGI-YLLFYTLISSLpLLISILHLHTWTGTLSL-PILQLVH 183
Cdd:TIGR01770 115 IFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGSLNFeDLLLFLS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 184 PLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITL-MTTPLSNHLHYPFL 262
Cdd:TIGR01770 194 NGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 263 TLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTS----SMLFCLANTNYERTH 338
Cdd:TIGR01770 274 IIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLSLLRSYKDEWIE 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 836643791 339 SriLLLTRGLQPLLPLMALWWLLANLTNMALPPTTNLMAELTIMIALFH----WSAPTIILTGV 398
Cdd:TIGR01770 354 Y--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKsglyWLAVIAVLTSV 415
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
212-390 |
1.28e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.43 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITLMTTPLSNHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 292 SHMGL--------VVAASMIQTSW---SFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMALWWL 360
Cdd:PRK08042 279 ENIGIillglgagVTGIALEQPALialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
|
170 180 190
....*....|....*....|....*....|
gi 836643791 361 LANLTNMALPPTTNLMAELTIMIALFHWSA 390
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQSFFKLSN 388
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-323 |
1.37e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 43.95 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 75 LMILASQNHLQHEPLARKRAFIAALVTIQPFIVLAfSATELTLFYIAFEATLIPTLILITRWGSQPERLSAGI-YLLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 154 LISSLpLLISILHLHTWTGTLSLP-ILQLVHPLLTDSWPGLLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLA 232
Cdd:COG1007 164 LSSGF-LLYGISLLYGATGSLNLAgIAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 233 ALLLKLGGYGIMRITLMTTP-LSNHLHYPFLTLA----LWGALMTssicLRQTDLKSLIAYSSVSHMGLVVAASMIQTSW 307
Cdd:COG1007 243 TAPKIAAFAALLRLLVEAFPgLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPL 318
|
250
....*....|....*.
gi 836643791 308 SFSGAMILMISHGLTS 323
Cdd:COG1007 319 GVSAALFYLLAYLFMN 334
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
2.00e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 43.66 E-value: 2.00e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 836643791 277 LRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
6.81e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.14 E-value: 6.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 137 GSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILQLVHPLLTDSWPGLLSS--LALLTAFMVKAPLYGLHL 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRALLEAgaALLLVVFLIKAAMWPLNF 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 215 WLPKAHVEA--PIAGSMllaALLLKLGGYGIMRI-TLMTTPLSNHLHYPFLTLALWGALMTSSI----CLRQTDLKSLIA 287
Cdd:PRK12666 232 WLPPAYAAAsaPVAALF---AIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLAA 308
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 836643791 288 YSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
277-408 |
1.78e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 41.06 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 277 LRQTDLKSLIAYSSVSHMGLVVAASMIQTSWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMA 356
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLA 365
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 836643791 357 LWWLLANLTNMALPPTTNLMAELTIMIALFHWSAP----TIILTGVA--TLLTASYTL 408
Cdd:PRK12644 366 VVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVlgSILTVAYSL 423
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
160-327 |
2.30e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 160 LLISILHLHTWTGTLSLPIL--QLVHPLLTDSWPGLLSSLALLTAF---MVKAPLYGLHLWLPKAhVEAPI-------AG 227
Cdd:PRK07376 189 LLLGILGLFWATGSFDFDGIadRLSELVSSGAVSGWLALLLCILVFlgpMAKSAQFPLHVWLPDA-MEGPTpisalihAA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 228 SMLLAalllklggyGIMRITLMTtPLSNHLHYPFLTLALWGAL---MTSSICLRQTDLKSLIAYSSVSHMGLVVAASMIQ 304
Cdd:PRK07376 268 TMVAA---------GVFLVARMY-PVFEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG 337
|
170 180
....*....|....*....|...
gi 836643791 305 tswSFSGAMILMISHGLTSSMLF 327
Cdd:PRK07376 338 ---AYSAGLFHLMTHAYFKAMLF 357
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-371 |
2.98e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.20 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 106 IVLAFSATELTLFyIAFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLISILHLHTWTGTLSLPILqLVHPL 185
Cdd:PRK12649 125 IGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATI-LQDSE 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 186 LTDSWPGLLSSLALLTAFMVKA-------PLYglhLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRItlmtTPLSNHL 257
Cdd:PRK12649 203 LIENIKGHPLFLITLILIFIGAaaksaqgPFY---IWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARI----HPIFSGT 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 836643791 258 HYPFLTLALWG---ALMTSSICLRQTDLKSLIAYSSVSHMGLVVA----ASMIQTSWSFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12649 275 EAWFILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVA 354
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 836643791 331 NTNYERTHSRILLLTRGLQPLLPLMALWWLLANLTNMALPP 371
Cdd:PRK12649 355 GIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| |
