|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 733.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00100 6 KTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00100 86 GASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00100 166 GGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMF 322
Cdd:MTH00100 246 SPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLF 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 824762500 323 WILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKILKW 376
Cdd:MTH00100 326 WLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
6-370 |
3.93e-126 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 368.35 E-value: 3.93e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 6 PLIKIINDsFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGAS 85
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 86 MFFICLFLHVGRGMYYGSYTF-ME-TWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 163
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKKpRElNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 164 GFSVDKATLTRFFAFH-FILPFIIAALAMVHLIFLHETGSNNPTGLD----SNADKIPFHPYYTVKDFLGFLLLFLILLS 238
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPErkktEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 239 LVLFTPDllGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVIALVLSILILILLPFLHNSKQRSMSFRP 316
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 824762500 317 ISQCMFWILVADLLTLTWIGGQPVehPFVIIGQIASILYFTIILIFLPLASALE 370
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
6-203 |
2.81e-99 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 292.73 E-value: 2.81e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 6 PLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGAS 85
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 86 MFFICLFLHVGRGMYYGSY--TFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 163
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 824762500 164 GFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSN 203
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
15-201 |
4.04e-91 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 271.56 E-value: 4.04e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 15 FIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLH 94
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 95 VGRGMYYG--SYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 172
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 824762500 173 TRFFAFHFILPFIIAALAMVHLIFLHETG 201
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
255-288 |
6.73e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 48.64 E-value: 6.73e-07
10 20 30
....*....|....*....|....*....|....
gi 824762500 255 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGV 288
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 733.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00100 6 KTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00100 86 GASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00100 166 GGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMF 322
Cdd:MTH00100 246 SPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLF 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 824762500 323 WILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKILKW 376
Cdd:MTH00100 326 WLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
5-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 673.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 5 HPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGA 84
Cdd:MTH00119 9 HPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 85 SMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGG 164
Cdd:MTH00119 89 SMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 165 FSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFTP 244
Cdd:MTH00119 169 FSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 245 DLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMFWI 324
Cdd:MTH00119 249 NLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWT 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 824762500 325 LVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKILKW 376
Cdd:MTH00119 329 LVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 662.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 5 HPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGA 84
Cdd:MTH00131 8 HPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 85 SMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGG 164
Cdd:MTH00131 88 SFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 165 FSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFTP 244
Cdd:MTH00131 168 FSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 245 DLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMFWI 324
Cdd:MTH00131 248 NLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWT 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 824762500 325 LVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKILKW 376
Cdd:MTH00131 328 LVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
5-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 647.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 5 HPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGA 84
Cdd:MTH00074 9 HPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 85 SMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGG 164
Cdd:MTH00074 89 SFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 165 FSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFTP 244
Cdd:MTH00074 169 FSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 245 DLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMFWI 324
Cdd:MTH00074 249 NLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWL 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 824762500 325 LVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKILKW 376
Cdd:MTH00074 329 LVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
4-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 618.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 4 KHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANG 83
Cdd:MTH00191 4 THPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 84 ASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 163
Cdd:MTH00191 84 ASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 164 GFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFT 243
Cdd:MTH00191 164 GFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFS 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 244 PDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMFW 323
Cdd:MTH00191 244 PNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFW 323
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 824762500 324 ILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPL 365
Cdd:MTH00191 324 LWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
8-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 600.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 8 IKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMF 87
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 88 FICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSV 167
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 168 DKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFTPDLL 247
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 248 GDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMFWILVA 327
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 824762500 328 DLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIF 362
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
5-374 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 583.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 5 HPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGA 84
Cdd:MTH00034 8 HPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 85 SMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGG 164
Cdd:MTH00034 88 SLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 165 FSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFTP 244
Cdd:MTH00034 168 FSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 245 DLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMFWI 324
Cdd:MTH00034 248 TALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWL 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 824762500 325 LVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKIL 374
Cdd:MTH00034 328 LIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
3-374 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 578.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00145 7 KSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00145 87 GASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00145 167 GGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMF 322
Cdd:MTH00145 247 FPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 824762500 323 WILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIfLPLASALENKIL 374
Cdd:MTH00145 327 WIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLI-LPLVQKLWDNIL 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
3-375 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 552.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00016 7 KTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00016 87 GASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00016 167 GGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMF 322
Cdd:MTH00016 247 WPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 824762500 323 WILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTiILIFLPLASALENKILK 375
Cdd:MTH00016 327 WLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
3-375 |
1.45e-179 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 503.47 E-value: 1.45e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00053 7 KENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00053 87 GASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00053 167 GGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMF 322
Cdd:MTH00053 247 FPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 824762500 323 WILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKILK 375
Cdd:MTH00053 327 WFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-375 |
5.16e-179 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 501.92 E-value: 5.16e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00022 5 KENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHAN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00022 85 GASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00022 165 GGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYF 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMF 322
Cdd:MTH00022 245 APNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAF 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 824762500 323 WILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFLPLASALENKILK 375
Cdd:MTH00022 325 WFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
3-375 |
1.41e-173 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 488.28 E-value: 1.41e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00224 7 TTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00224 87 GASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00224 167 GGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMF 322
Cdd:MTH00224 247 EPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 824762500 323 WILVADLLTLTWIGGQPVEHPFVIIGQIASILYFTiILIFLPLASALENKILK 375
Cdd:MTH00224 327 WLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFS-YFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
3-371 |
2.70e-134 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 388.91 E-value: 2.70e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDsFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:MTH00033 4 RKTGLLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHAN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:MTH00033 83 GASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 163 GGFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLF 242
Cdd:MTH00033 163 GGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 243 --TPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQC 320
Cdd:MTH00033 243 prIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKF 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 824762500 321 MFWILVADLLTLTWIGGQPV-EHPFVIIGQIASILYFTIILIFLPLASALEN 371
Cdd:MTH00033 323 FFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
6-370 |
3.93e-126 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 368.35 E-value: 3.93e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 6 PLIKIINDsFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGAS 85
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 86 MFFICLFLHVGRGMYYGSYTF-ME-TWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 163
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKKpRElNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 164 GFSVDKATLTRFFAFH-FILPFIIAALAMVHLIFLHETGSNNPTGLD----SNADKIPFHPYYTVKDFLGFLLLFLILLS 238
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPErkktEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 239 LVLFTPDllGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVIALVLSILILILLPFLHNSKQRSMSFRP 316
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 824762500 317 ISQCMFWILVADLLTLTWIGGQPVehPFVIIGQIASILYFTIILIFLPLASALE 370
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
9-363 |
2.90e-118 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 346.93 E-value: 2.90e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 9 KIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFF 88
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 89 ICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVD 168
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 169 KATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFtPDLLG 248
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFIIFSLFY-PFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 249 DPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSkqrSMSFRPISQCMFWILVAD 328
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|....*
gi 824762500 329 LLTLTWIGGQPVEHPFVIIGQIASILYFTIILIFL 363
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
6-203 |
2.81e-99 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 292.73 E-value: 2.81e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 6 PLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGAS 85
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 86 MFFICLFLHVGRGMYYGSY--TFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 163
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 824762500 164 GFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSN 203
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
7-362 |
3.67e-91 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 277.63 E-value: 3.67e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 7 LIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASM 86
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 87 FFICLFLHVGRGMYYGSYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFS 166
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 167 VDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPTGL-DSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFTPD 245
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 246 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLpflhnSKQRSMSFRPISQCMFWIL 325
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWVP-----TFNGSSVYSVWRQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|....*..
gi 824762500 326 VADLLTLTWIGGQPVEHPFVIIGQIASILYFTIILIF 362
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFIF 352
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
15-201 |
4.04e-91 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 271.56 E-value: 4.04e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 15 FIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLH 94
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 95 VGRGMYYG--SYTFMETWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 172
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 824762500 173 TRFFAFHFILPFIIAALAMVHLIFLHETG 201
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
204-351 |
1.72e-44 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 150.49 E-value: 1.72e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 204 NPTGLDSNADKIPFHPYYTVKDFLGFLLLFLILLSLVLFTPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPN 283
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 824762500 284 KLGGVIALVLSILILILLPFLHNSKQRSMsFRPISQCMFWILVADLLTLTWIGGQPVEHPFVIIGQIA 351
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
85-225 |
5.21e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 147.39 E-value: 5.21e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 85 SMFFICLFLHVGRGMYYGSYTFME--TWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 162
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 824762500 163 GGFSVDKATLTRFFAFHF-ILPFIIAALAMVHLIFLHETGSNNPTGLDSNADKIPFHPYYTVKD 225
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKM 144
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
30-205 |
1.15e-42 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 148.32 E-value: 1.15e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 30 FGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFME- 108
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 109 -TWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH-FILPFII 186
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 824762500 187 AALAMVHLIFLHETGSNNP 205
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
255-355 |
1.36e-38 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 133.37 E-value: 1.36e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 255 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSFRPISQCMFWILVADLLTLTW 334
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 824762500 335 IGGQPVEHPFVIIGQIASILY 355
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| petB |
CHL00070 |
cytochrome b6 |
3-205 |
1.03e-35 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 129.84 E-value: 1.03e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 3 QKHPLIKIINDSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHAN 82
Cdd:CHL00070 9 EERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRW 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 83 GASMFFICLFLHVGRGMYYGSYTFME--TWNVGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 160
Cdd:CHL00070 89 SASMMVLMMILHVFRVYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVEL 168
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 824762500 161 IWGGFSVDKATLTRFFAFH-FILPFIIAALAMVHLIFLHETGSNNP 205
Cdd:CHL00070 169 LRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
255-336 |
5.99e-08 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 51.72 E-value: 5.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 824762500 255 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPFLHNSKQRSMSF-RPISQCMFwiLVADLLTLt 333
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF--LFGTLVTL- 142
|
...
gi 824762500 334 WIG 336
Cdd:COG5679 143 WLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
255-288 |
1.50e-07 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 50.39 E-value: 1.50e-07
10 20 30
....*....|....*....|....*....|....
gi 824762500 255 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGV 288
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
255-288 |
6.73e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 48.64 E-value: 6.73e-07
10 20 30
....*....|....*....|....*....|....
gi 824762500 255 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGV 288
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
|
|
| |
