|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-204 |
1.51e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 213.85 E-value: 1.51e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 1 NLKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFY 80
Cdd:MTH00165 318 NMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIY 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 81 YSMSGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPYMIVLPFYLKFLTIIVVILGSYLGYFISNISF 160
Cdd:MTH00165 398 YSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSL 477
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 82398924 161 SQGLFSLNMLFFVSFAGSMWFMPFLSTNFVSYLPLKMGYYSSKS 204
Cdd:MTH00165 478 SYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKS 521
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
5-196 |
5.82e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 132.08 E-value: 5.82e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFYYSMS 84
Cdd:MTH00209 318 SQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLW 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 85 GDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPYMIVLPFYLKFLTIIVVILGSYLGYFISNISFsqgl 164
Cdd:MTH00209 398 GPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF---- 473
|
170 180 190
....*....|....*....|....*....|..
gi 82398924 165 FSLNMLFFVSFAGSMWFMPFLSTNFVSYLPLK 196
Cdd:MTH00209 474 FLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMK 505
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
5-204 |
1.14e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 128.73 E-value: 1.14e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFYYSMS 84
Cdd:MTH00207 322 SQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLW 401
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 85 GDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPYMIVLPFYLKFLTIIVVILGSYLGYFISNISFSQGL 164
Cdd:MTH00207 402 SPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTP 481
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 82398924 165 FSLNMLFFVSFAGSMWFMPFLSTNFVSYLPLKMGYYSSKS 204
Cdd:MTH00207 482 LLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKL 521
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
4-198 |
3.33e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 127.27 E-value: 3.33e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 4 DSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFYYSM 83
Cdd:MTH00151 318 GTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLV 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 84 SGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPYMIVLPFYLKFLTIIVVIlgsyLGYFISNISFSQG 163
Cdd:MTH00151 398 WGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVIL----LGLFLSFGFWDSG 473
|
170 180 190
....*....|....*....|....*....|....*
gi 82398924 164 LFSLNMLFFVSFAGSMWFMPFLSTNFVSYLPLKMG 198
Cdd:MTH00151 474 FSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLS 508
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
74-204 |
2.17e-28 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 104.94 E-value: 2.17e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 74 YSFRLFYYSMSGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPYMIVLPFYLKFLTIIVVILGSYLGY 153
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 82398924 154 FISNISFSQGLFSLNMlFFVSFAGSMWFMPFLSTNFVSYLPLKMGYYSSKS 204
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ 130
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-202 |
4.56e-27 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 107.34 E-value: 4.56e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 1 NLKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFY 80
Cdd:MTH00211 343 GLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIF 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 81 YSMSGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPYMIV-LPFYLKFLTIIVVILGSYLGYFISNIS 159
Cdd:MTH00211 423 LSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGLELVNLT 502
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 82398924 160 FSQGLFSLnmlffVSFAGSMWFMPFLSTNFVSYLPLKMGYYSS 202
Cdd:MTH00211 503 HKQLKTST-----LSFSNMLGYYPPIIHRLLPKLSLKWGQTLS 540
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-193 |
2.93e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 102.36 E-value: 2.93e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 1 NLKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFY 80
Cdd:MTH00208 375 SLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIF 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 81 YSMSGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPyMIVLPFYLKFLTIIVVILGSYLGyFISNISF 160
Cdd:MTH00208 455 FCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFS-FSFLLSL 532
|
170 180 190
....*....|....*....|....*....|...
gi 82398924 161 SQGLFSLNMLFFVSFAgsmWFMPFLSTNFVSYL 193
Cdd:MTH00208 533 SSNPINSNFFSFLSNQ---WFFVNISHSIIISF 562
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-159 |
1.28e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 100.31 E-value: 1.28e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 1 NLKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFY 80
Cdd:MTH00108 349 NLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIF 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 81 YSMSGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFP--IPYMiVLPFYLKFLTIIVVILGSYLGYFISNI 158
Cdd:MTH00108 429 FALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILGFILALELNLL 507
|
.
gi 82398924 159 S 159
Cdd:MTH00108 508 T 508
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-176 |
1.36e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 100.37 E-value: 1.36e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 1 NLKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFY 80
Cdd:MTH00066 346 SLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIY 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 81 YSMSGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPIPYMIV-LPFYLKFLTIIVVILGSYLGYFISNIS 159
Cdd:MTH00066 426 FSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGLLIALDLAKIT 505
|
170
....*....|....*..
gi 82398924 160 FSQGLFSLNMLFFVSFA 176
Cdd:MTH00066 506 SKTTPKTKMHSFSNLLA 522
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-159 |
4.72e-24 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 98.70 E-value: 4.72e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 1 NLKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFY 80
Cdd:MTH00004 348 NLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMIL 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 81 YSMSGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWLIFPI-PYMIVLPFYLKFLTIIVVILGSYLGYFISNIS 159
Cdd:MTH00004 428 LVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMT 507
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-83 |
4.88e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 87.19 E-value: 4.88e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 1 NLKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRL-F 79
Cdd:MTH00137 354 SLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvF 433
|
....
gi 82398924 80 YYSM 83
Cdd:MTH00137 434 FVSM 437
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
2-200 |
3.48e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 81.98 E-value: 3.48e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 2 LKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFYY 81
Cdd:MTH00210 351 VSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYL 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 82 SMSGDNNFYSS--FSFDDKGYYISFGMMALLFVAVFGGS-----FLSWLIFPIpymivLPFYLKFLTIIVVILGSYLGYF 154
Cdd:MTH00210 431 TFITNTNSKKEvfIGVHESSWNITFPLLLLAFGSIFVGYlgkevVLSNVIPPI-----VPNSIKMIPLLFSLLGALLAFV 505
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 82398924 155 ISN------ISFSQGLFSLNMLFFVSFAGSMWFMPFLSTNFVSYLPLKMGYY 200
Cdd:MTH00210 506 IYNsmvfliKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHL 557
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-155 |
3.13e-16 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 76.34 E-value: 3.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILE-MVCLSWINCFIFFLYFISTGLTASYSFRLFYYSM 83
Cdd:COG1009 353 TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVF 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 84 SGDNNFYSSFSFDDKGYYISFGMMALLFVAVFGGSFLSWL---------IFPIPYMIVLPFYLKFLTIIVVILGSYLGYF 154
Cdd:COG1009 433 FGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYL 512
|
.
gi 82398924 155 I 155
Cdd:COG1009 513 L 513
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
4-155 |
4.14e-16 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 75.97 E-value: 4.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 4 DSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEmVCLSWINCFIFFLYFISTGLTASYSFRLFYYSM 83
Cdd:PRK06590 359 HEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVF 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 84 SGDNnfyssfsfDDKGY-------YISFGMMALLFVAVFGG-----SFLSWLIFP-----IPYMIVLPFYLKFLTIIVVI 146
Cdd:PRK06590 438 HGKE--------KEKIHhphespaVMTLPLIVLAVLSVFAGalivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVAL 509
|
....*....
gi 82398924 147 LGSYLGYFI 155
Cdd:PRK06590 510 AGIALAWLL 518
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
2-199 |
4.32e-16 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 75.88 E-value: 4.32e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 2 LKDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFYY 81
Cdd:MTH00020 350 LSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYL 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 82 S-MSGDNNFYSSFSFDDKG-YYISFGMMALLFVAVFGGSFLSWLIF--------PIPYMI-VLPFYLKFLTIIVVI-LGS 149
Cdd:MTH00020 430 TfLSNTNLKKAVFFHLHEGdWNLLLPLGILALGSIFVGYLAKEMIWsfqitlppIVPLSIkLLPVFLSLGGIGLVIiLYF 509
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 82398924 150 YLGYFISNISFSQGLFSLNmlffvsFAGSMWFMPFLSTNFVSYLPLKMGY 199
Cdd:MTH00020 510 YSSKTFRVPFSFIGRNSYT------FLGSAWQFNYILNYFLIKKIWKGGH 553
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
5-86 |
2.89e-13 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 67.74 E-value: 2.89e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSwiNCFIFFLYFISTGLTASYSFRLFYYSMS 84
Cdd:PRK07376 378 AQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFE 455
|
..
gi 82398924 85 GD 86
Cdd:PRK07376 456 GE 457
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
5-90 |
6.74e-09 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 54.90 E-value: 6.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMvclSWINCFIF-FLYFISTGLTASYSFRLFYYSM 83
Cdd:CHL00025 378 SQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND---SWLYSPIFaIIAWSTAGLTAFYMFRIYLLTF 454
|
....*..
gi 82398924 84 SGDNNFY 90
Cdd:CHL00025 455 EGHLRVH 461
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
4-50 |
1.14e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.42 E-value: 1.14e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 82398924 4 DSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEM 50
Cdd:MTH00032 369 DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
3-67 |
7.65e-06 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 45.38 E-value: 7.65e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 82398924 3 KDSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFIS 67
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
5-200 |
9.41e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 42.21 E-value: 9.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTASYSFRLFYysms 84
Cdd:MTH00095 306 QQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWK---- 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82398924 85 gdnNFYSSFSFDDKGYYISFGMMALLFVAVFGG-SFLSWLIFPIPYMIVLPFYLKFLTIIVVILgsyLGYFISNISFSQG 163
Cdd:MTH00095 382 ---SFFLSFSKVVNVYSSSVLMNFLSLMLVFFSvFFLWWLNFNLLNLPSLFLYLDFYVPLFYLF---MIMLFSFFFFKLL 455
|
170 180 190
....*....|....*....|....*....|....*..
gi 82398924 164 LFSLNMLFFVSFAGSMWFMPFLSTNFVSYLPLKMGYY 200
Cdd:MTH00095 456 FKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYK 492
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
5-81 |
1.11e-04 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 42.06 E-value: 1.11e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVcLSWINCFIFFLYFISTGLTASYSFRLFYY 81
Cdd:COG0651 353 TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-80 |
1.63e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 38.80 E-value: 1.63e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 82398924 4 DSQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLyFISTGLTASYSFRLFY 80
Cdd:PRK12667 375 GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
5-78 |
3.45e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 37.72 E-value: 3.45e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCFIFFLYFISTGLTA----SYSFRL 78
Cdd:PRK12650 353 TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARL 430
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
5-72 |
5.28e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 37.20 E-value: 5.28e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 82398924 5 SQDIRFMGSIVNFMPLTSICFNVSSLSLCGMPFLAGFYSkdlILEMVCLSWINCFIFFLYFIST-GLTA 72
Cdd:PRK07390 362 TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVnALTA 427
|
|
| |
