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Conserved domains on  [gi|813559314|ref|YP_009131556|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Pelecinus polyturator]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-82 1.11e-13

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 60.17  E-value: 1.11e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFYMMYIIVVKFNLDYNIIMYMMVFMVCEGVLGLSILVLYIRYNGSDMV 80
Cdd:MTH00162  8 LFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYF 87


                ..
gi 813559314 81 KF 82
Cdd:MTH00162 88 SS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-82 1.11e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 60.17  E-value: 1.11e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFYMMYIIVVKFNLDYNIIMYMMVFMVCEGVLGLSILVLYIRYNGSDMV 80
Cdd:MTH00162  8 LFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYF 87


                ..
gi 813559314 81 KF 82
Cdd:MTH00162 88 SS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-82 1.11e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 60.17  E-value: 1.11e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFYMMYIIVVKFNLDYNIIMYMMVFMVCEGVLGLSILVLYIRYNGSDMV 80
Cdd:MTH00162  8 LFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYF 87


                ..
gi 813559314 81 KF 82
Cdd:MTH00162 88 SS 89
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-81 1.99e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 41.75  E-value: 1.99e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFYMMYIIVVKFNLDYNIIMYMMVFMVCEGVLGLSILVLYIRYNGSDMV 80
Cdd:MTH00149 10 LFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYV 89


                .
gi 813559314 81 K 81
Cdd:MTH00149 90 S 90
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-88 1.20e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 39.96  E-value: 1.20e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFYMMYIIVVKFNLDYNIIMYMMVFMVCEGVLGLSILVLYIRYNGSDMV 80
Cdd:MTH00188 10 LLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYV 89


                ....*...
gi 813559314 81 KFMNLKLW 88
Cdd:MTH00188 90 SSLNLIKC 97
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-85 5.32e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 35.73  E-value: 5.32e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFYMMYIIVVKFNLDYNII--MYMMVFMVCEGVLGLSILVLYIRYNGSD 78
Cdd:MTH00067  9 YSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVATTRTHGTD 88


                ....*..
gi 813559314 79 MVKFMNL 85
Cdd:MTH00067 89 HLKNLNL 95
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-85 8.24e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 35.21  E-value: 8.24e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFYMMYIIVVKFNLDYNIIMYMMV--FMVCEGVLGLSILVLYIRYNGSD 78
Cdd:MTH00125  9 YTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILltFSACEAGTGLALLVATTRTHGSD 88


                ....*..
gi 813559314 79 MVKFMNL 85
Cdd:MTH00125 89 HLKNLNL 95
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 1-85 3.99e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 33.38  E-value: 3.99e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813559314  1 MSLFLCSLMLFTFFFKYMLLMLISLEFIMISIFY--MMYIIVVKFNLDYNIIMYMMVFMVCEGVLGLSILVLYIRYNGSD 78
Cdd:MTH00181  6 ISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLllALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTHGSD 85


                ....*..
gi 813559314 79 MVKFMNL 85
Cdd:MTH00181 86 HLLKFNL 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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