helix-turn-helix domain-containing protein [Paenibacillus wulumuqiensis]
winged helix-turn-helix transcriptional regulator( domain architecture ID 10004391)
winged helix-turn-helix (HTH) transcriptional regulator containing a HxlR family HTH domain; similar to HTH-type transcriptional regulator HxlR, a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon
List of domain hits
Name | Accession | Description | Interval | E-value | |||
HxlR | COG1733 | DNA-binding transcriptional regulator, HxlR family [Transcription]; |
2-101 | 3.34e-44 | |||
DNA-binding transcriptional regulator, HxlR family [Transcription]; : Pssm-ID: 441339 Cd Length: 108 Bit Score: 139.23 E-value: 3.34e-44
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Name | Accession | Description | Interval | E-value | |||
HxlR | COG1733 | DNA-binding transcriptional regulator, HxlR family [Transcription]; |
2-101 | 3.34e-44 | |||
DNA-binding transcriptional regulator, HxlR family [Transcription]; Pssm-ID: 441339 Cd Length: 108 Bit Score: 139.23 E-value: 3.34e-44
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HxlR | pfam01638 | HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts ... |
14-100 | 4.44e-36 | |||
HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis. Pssm-ID: 460276 [Multi-domain] Cd Length: 91 Bit Score: 118.17 E-value: 4.44e-36
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HTH_ARSR | cd00090 | Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric ... |
12-92 | 1.43e-06 | |||
Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions. Pssm-ID: 238042 [Multi-domain] Cd Length: 78 Bit Score: 42.67 E-value: 1.43e-06
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HTH_ARSR | smart00418 | helix_turn_helix, Arsenical Resistance Operon Repressor; |
23-80 | 1.32e-03 | |||
helix_turn_helix, Arsenical Resistance Operon Repressor; Pssm-ID: 197713 [Multi-domain] Cd Length: 66 Bit Score: 34.49 E-value: 1.32e-03
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Name | Accession | Description | Interval | E-value | |||
HxlR | COG1733 | DNA-binding transcriptional regulator, HxlR family [Transcription]; |
2-101 | 3.34e-44 | |||
DNA-binding transcriptional regulator, HxlR family [Transcription]; Pssm-ID: 441339 Cd Length: 108 Bit Score: 139.23 E-value: 3.34e-44
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HxlR | pfam01638 | HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts ... |
14-100 | 4.44e-36 | |||
HxlR-like helix-turn-helix; HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis. Pssm-ID: 460276 [Multi-domain] Cd Length: 91 Bit Score: 118.17 E-value: 4.44e-36
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HTH_ARSR | cd00090 | Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric ... |
12-92 | 1.43e-06 | |||
Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions. Pssm-ID: 238042 [Multi-domain] Cd Length: 78 Bit Score: 42.67 E-value: 1.43e-06
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ArsR | COG0640 | DNA-binding transcriptional regulator, ArsR family [Transcription]; |
6-67 | 3.87e-04 | |||
DNA-binding transcriptional regulator, ArsR family [Transcription]; Pssm-ID: 440405 [Multi-domain] Cd Length: 92 Bit Score: 36.79 E-value: 3.87e-04
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COG1777 | COG1777 | Predicted transcriptional regulator, ArsR family [Transcription]; |
6-83 | 1.11e-03 | |||
Predicted transcriptional regulator, ArsR family [Transcription]; Pssm-ID: 441383 Cd Length: 113 Bit Score: 35.78 E-value: 1.11e-03
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HTH_ARSR | smart00418 | helix_turn_helix, Arsenical Resistance Operon Repressor; |
23-80 | 1.32e-03 | |||
helix_turn_helix, Arsenical Resistance Operon Repressor; Pssm-ID: 197713 [Multi-domain] Cd Length: 66 Bit Score: 34.49 E-value: 1.32e-03
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Blast search parameters | ||||
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