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Conserved domains on  [gi|778081839|gb|AJY58432|]
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NADH dehydrogenase subunit I, partial (mitochondrion) [Peronospora sp. HV2117]

Protein Classification

similar to NADH dehydrogenase I subunit H( domain architecture ID 10002943)

protein similar to NADH dehydrogenase I subunit H

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-167 1.14e-77

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440629  Cd Length: 329  Bit Score: 233.87  E-value: 1.14e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQK-TIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSG 79
Cdd:COG1005  143 ALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAG 222

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  80 YNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSikFINFLPGSFWFSIKVCFFVVLFVVARAILPRYRYD 159
Cdd:COG1005  223 YHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPIL--PLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYD 300


                 ....*...
gi 778081839 160 QLMRLGWK 167
Cdd:COG1005  301 QLMRLGWK 308
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-167 1.14e-77

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 233.87  E-value: 1.14e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQK-TIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSG 79
Cdd:COG1005  143 ALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAG 222

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  80 YNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSikFINFLPGSFWFSIKVCFFVVLFVVARAILPRYRYD 159
Cdd:COG1005  223 YHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPIL--PLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYD 300


                 ....*...
gi 778081839 160 QLMRLGWK 167
Cdd:COG1005  301 QLMRLGWK 308
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-167 4.15e-76

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 229.69  E-value: 4.15e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:PRK06076 144 ALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGY 223

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSikfiNFLPGSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:PRK06076 224 HTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLG----GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQ 299


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:PRK06076 300 LMRLGWK 306
NADHdh pfam00146
NADH dehydrogenase;
1-167 7.67e-72

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 218.11  E-value: 7.67e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839    1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:pfam00146 130 ALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGF 209

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFsikfinflPGSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:pfam00146 210 HTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL--------PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQ 281


                  ....*..
gi 778081839  161 LMRLGWK 167
Cdd:pfam00146 282 LMRLGWK 288
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
1-167 1.81e-39

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 136.37  E-value: 1.81e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFpLFPV-FLIFFISCLAETNRHPFDLPEAEAELVSG 79
Cdd:NF040610 152 AFRNFARMIGYEVPLGICVVSVAIMAGSLNIVEIVEAQSPIWFAF-LQPIgFIVFFIALMADMGRLPFDQNEAEEELIAG 230

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  80 YNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAP-FPFSIKFINFLPGSFWFSIKVCFFVVLFVVARAILPRYRY 158
Cdd:NF040610 231 WITEYSGMRFGLGFFAEYIHLILGSFLVVLLFLGGWNLPgFVTDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRI 310


                 ....*....
gi 778081839 159 DQLMRLGWK 167
Cdd:NF040610 311 DQVVDLSWK 319
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-167 1.14e-77

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 233.87  E-value: 1.14e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQK-TIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSG 79
Cdd:COG1005  143 ALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAG 222

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  80 YNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSikFINFLPGSFWFSIKVCFFVVLFVVARAILPRYRYD 159
Cdd:COG1005  223 YHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPIL--PLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYD 300


                 ....*...
gi 778081839 160 QLMRLGWK 167
Cdd:COG1005  301 QLMRLGWK 308
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-167 4.15e-76

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 229.69  E-value: 4.15e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:PRK06076 144 ALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGY 223

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSikfiNFLPGSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:PRK06076 224 HTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLG----GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQ 299


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:PRK06076 300 LMRLGWK 306
NADHdh pfam00146
NADH dehydrogenase;
1-167 7.67e-72

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 218.11  E-value: 7.67e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839    1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:pfam00146 130 ALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGF 209

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFsikfinflPGSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:pfam00146 210 HTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL--------PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQ 281


                  ....*..
gi 778081839  161 LMRLGWK 167
Cdd:pfam00146 282 LMRLGWK 288
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-167 3.86e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 194.18  E-value: 3.86e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00054 136 AIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGF 215

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSIKFINFLpgsfWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00054 216 NVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPTSYFSNFV----WFGIKIALIIFLFIWIRASYPRIRYDQ 291


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00054 292 LMALLWK 298
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-167 5.41e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 186.48  E-value: 5.41e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKT-IWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSG 79
Cdd:MTH00216 140 AIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSG 219

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  80 YNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFsikfinFLPGSFWFSIKVCFFVVLFVVARAILPRYRYD 159
Cdd:MTH00216 220 YNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIKY------FKGGAGWFGLKVVFIIFLFIWVRASFPRIRYD 293


                 ....*...
gi 778081839 160 QLMRLGWK 167
Cdd:MTH00216 294 QLMALLWK 301
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-167 1.01e-51

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 168.27  E-value: 1.01e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00029 141 AIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGF 220

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPF-----PFSI----KFINFLPGSFWFSIKVCFFVVLFVVARA 151
Cdd:MTH00029 221 NVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSPLdgiptPPEAfsifEQIASSKSSFWFFTKSSIFILFFIWSRA 300

                        170
                 ....*....|....*.
gi 778081839 152 ILPRYRYDQLMRLGWK 167
Cdd:MTH00029 301 SFPRIRYDQLMKLLWK 316
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-167 8.58e-50

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 162.45  E-value: 8.58e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00040 136 AIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGY 215

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGwlaPFPFSikfINFLPGSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00040 216 NVEYAGGPFALFFIAEYANIIFMNLLSVILFLGG---GSPFN---EIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQ 289


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00040 290 LMFLTWK 296
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-167 1.28e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 161.58  E-value: 1.28e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00143 133 AVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGF 212

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWlapfpfsikFINFLPGSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00143 213 NVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS---------SVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDL 283


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00143 284 LMMLCWK 290
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-167 4.37e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 160.46  E-value: 4.37e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00218 134 ALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGF 213

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSIKFINFLPGSFWFsikvcffvvlfvvaRAILPRYRYDQ 160
Cdd:MTH00218 214 NVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINLMLKATLLVFLFLWV--------------RASLPRFRYDQ 279


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00218 280 LMHLAWK 286
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-167 1.24e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 159.40  E-value: 1.24e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00071 137 ALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGF 216

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSIKFINFLpgsfwfsIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00071 217 NVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELSTMNLM-------IKASILSMLFLWVRASYPRFRYDQ 289


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00071 290 LMHLVWK 296
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-167 1.81e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 159.39  E-value: 1.81e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00134 138 ALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGF 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSIKFINFLpgsfwfsIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00134 218 NVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELTTINLM-------TKAALLSVVFLWVRASYPRFRYDQ 290


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00134 291 LMHLVWK 297
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-167 4.23e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 158.13  E-value: 4.23e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00111 137 ALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGF 216

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLggwlapfpfSIKFINFLPGSFWFSI--KVCFFVVLFVVARAILPRYRY 158
Cdd:MTH00111 217 NVEYAAGPFALFFLAEYANILLMNTLTTILFL---------NPSTLNLPPELFTINLmtKTLLLTSGFLWIRASYPRFRY 287


                 ....*....
gi 778081839 159 DQLMRLGWK 167
Cdd:MTH00111 288 DQLMHLLWK 296
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-167 1.60e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 156.71  E-value: 1.60e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00104 132 ALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGF 211

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSIKFINFLpgsfwfsIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00104 212 NVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNPYMPELYTTNFT-------IKTLLLTILFLWIRASYPRFRYDQ 284


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00104 285 LMHLLWK 291
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-167 1.94e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 150.69  E-value: 1.94e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00193 134 SLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGF 213

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSIKFINFlpgSFWFSIkvcffvvlfvvARAILPRYRYDQ 160
Cdd:MTH00193 214 NVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLLFYLKLLFI---SFLFIW-----------VRGTLPRFRYDK 279


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00193 280 LMYLAWK 286
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-167 2.83e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 145.18  E-value: 2.83e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00225 133 ALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGF 212

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGG--WLAPFPFSIKFINFlpgSFWFsikvcffvvlfVVARAILPRYRY 158
Cdd:MTH00225 213 NIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGffVTIDLFLILKIMLL---AFWF-----------IWVRGVLPRMRY 278


                 ....*....
gi 778081839 159 DQLMRLGWK 167
Cdd:MTH00225 279 DKLMSLTWK 287
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-167 1.58e-41

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 141.03  E-value: 1.58e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00195 134 AIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGF 213

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGwlapfpfsikfinflPGSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00195 214 NVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG---------------GGTIIVALKSLFLSFCFLWVRGSLPRFRYDQ 278


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00195 279 LMHLTWK 285
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
1-167 1.81e-39

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 136.37  E-value: 1.81e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFpLFPV-FLIFFISCLAETNRHPFDLPEAEAELVSG 79
Cdd:NF040610 152 AFRNFARMIGYEVPLGICVVSVAIMAGSLNIVEIVEAQSPIWFAF-LQPIgFIVFFIALMADMGRLPFDQNEAEEELIAG 230

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  80 YNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAP-FPFSIKFINFLPGSFWFSIKVCFFVVLFVVARAILPRYRY 158
Cdd:NF040610 231 WITEYSGMRFGLGFFAEYIHLILGSFLVVLLFLGGWNLPgFVTDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRI 310


                 ....*....
gi 778081839 159 DQLMRLGWK 167
Cdd:NF040610 311 DQVVDLSWK 319
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-167 2.52e-36

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 128.53  E-value: 2.52e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   2 LRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTI----WYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELV 77
Cdd:CHL00032 162 LRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYgfwgWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELV 241

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  78 SGYNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFsIKFINFLP------------GSFWFSIKVCFFVVL 145
Cdd:CHL00032 242 AGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPY-IFIPELFEinktggvfgttiGIFITLAKTYLFLFI 320

                        170       180
                 ....*....|....*....|..
gi 778081839 146 FVVARAILPRYRYDQLMRLGWK 167
Cdd:CHL00032 321 SITTRWTLPRLRMDQLLNLGWK 342
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 1-167 5.91e-32

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 116.03  E-value: 5.91e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTiWYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00010 135 ALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGF 213

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLgGWLAPFPFSikfinflpgSFWFSIKVCFFVVLFVVARAILPRYRYDQ 160
Cdd:MTH00010 214 NVEYSSGLFALIFMAEYANILIMSLFTSVFFT-SFIPSIFIS---------DLMLILKTVFLAFLFIWIRATFPRMRYDR 283


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00010 284 LMNLTWK 290
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 1-166 9.54e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 96.51  E-value: 9.54e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIvlaqktiwYCFPLFPVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00090 128 ALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSS--------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGY 199

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGgwlapfpfsikfINFLPGSFWFSIkvcffvvlFVVARAILPRYRYDQ 160
Cdd:MTH00090 200 NVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK------------FSFLMLFLIFSL--------LIFIRSSYPRFRYDM 259


                 ....*.
gi 778081839 161 LMRLGW 166
Cdd:MTH00090 260 MMSMFW 265
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-167 1.39e-18

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 80.23  E-value: 1.39e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIV--LAQKTIWYCFPLFPVFLI-FFISCLAETNRHPFDLPEAEAELV 77
Cdd:COG0650  128 ASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVayQAAHGPLLLSPSLLLAAIaFFIVLLAETGRIPFDIPETHLELH 207

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  78 SGYNVEYSAMGFALFFLGEYANMLLMSSLTTILFlggwlapFPFSIkFINFLPGSFWFSIKVCFFVVLFVVARAILPRYR 157
Cdd:COG0650  208 EGMLLEYSGRHLALLELAAALKLFVLLSLFVNLF-------LPWGI-ALTLLLALLLFLLKLLVLAVLLAVIEASTARLR 279

                        170
                 ....*....|
gi 778081839 158 YDQLMRLGWK 167
Cdd:COG0650  280 LFRVPDFLWT 289
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 1-167 1.47e-16

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 74.58  E-value: 1.47e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839   1 ALRSTAQMISYELTIGFSILSVIVCTKSLNLISIVLAQKTIWYCFPLfpVFLIFFISCLAETNRHPFDLPEAEAELVSGY 80
Cdd:MTH00058 133 SIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFPL--IYILWLVCILCETNRTPFDYGESESELVSGF 210

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 778081839  81 NVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLAPFPFSIKFINFLpgsfwfsikvcffvvlfvVARAILPRYRYDQ 160
Cdd:MTH00058 211 NTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLLFHLLFFM------------------WARATLPRVRYDY 272


                 ....*..
gi 778081839 161 LMRLGWK 167
Cdd:MTH00058 273 FVNFFWE 279
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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