|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
39-335 |
3.17e-27 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 110.77 E-value: 3.17e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 39 DDSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVQDsGQTIpKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN 118
Cdd:COG2319 120 TGAVRSVAFSPD---GKTLASGSADGTVRLWDLAT-GKLL-RTLTGHSGAVTSVAFSPDGKLLASGSDDGTVRLWDLATG 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 119 QAIQ-IAQHDAPVKTIHWikAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPErcycaDVIYPMA--------VVATAE 189
Cdd:COG2319 195 KLLRtLTGHTGAVRSVAF--SPDGKLLASGSADGTVRLWDLATGKLLRTLTGHS-----GSVRSVAfspdgrllASGSAD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 190 RGLIVYQLENqpsefRRIESPLKHQH---RCVAIFKDKQNkptgFALGSIEGRVAIHYINPPNPAKdnfTFKCHRSngtn 266
Cdd:COG2319 268 GTVRLWDLAT-----GELLRTLTGHSggvNSVAFSPDGKL----LASGSDDGTVRLWDLATGKLLR---TLTGHTG---- 331
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 768018525 267 tsapqdiyAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335
Cdd:COG2319 332 --------AVRSVAFSPDGKTLASGSDDGTVRLWDLATGELLRTLTGHTGAVTSVAFSPDGRTLASGSA 392
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
40-335 |
1.92e-23 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 98.18 E-value: 1.92e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 40 DSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVQdsGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ 119
Cdd:cd00200 10 GGVTCVAFSPD---GKLLATGSGDGTIKVWDLE--TGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 120 AIQ-IAQHDAPVKTIHWIkaPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPErCYCADVIYP----MAVVATAERGLIV 194
Cdd:cd00200 85 CVRtLTGHTSYVSSVAFS--PDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT-DWVNSVAFSpdgtFVASSSQDGTIKL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 195 YQLENqpseFRRIESPLKHQH--RCVAIFKDKQNkptgFALGSIEGRVAIHyinppnpakDNFTFKCHRSNGTNTSapqd 272
Cdd:cd00200 162 WDLRT----GKCVATLTGHTGevNSVAFSPDGEK----LLSSSSDGTIKLW---------DLSTGKCLGTLRGHEN---- 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 768018525 273 iyAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335
Cdd:cd00200 221 --GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSA 281
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
85-114 |
1.61e-06 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 44.23 E-value: 1.61e-06
10 20 30
....*....|....*....|....*....|
gi 768018525 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114
Cdd:smart00320 11 HTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
85-114 |
8.68e-06 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 42.33 E-value: 8.68e-06
10 20 30
....*....|....*....|....*....|
gi 768018525 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114
Cdd:pfam00400 10 HTGSVTSLAFSPDGKLLASGSDDGTVKVWD 39
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
39-335 |
3.17e-27 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 110.77 E-value: 3.17e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 39 DDSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVQDsGQTIpKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN 118
Cdd:COG2319 120 TGAVRSVAFSPD---GKTLASGSADGTVRLWDLAT-GKLL-RTLTGHSGAVTSVAFSPDGKLLASGSDDGTVRLWDLATG 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 119 QAIQ-IAQHDAPVKTIHWikAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPErcycaDVIYPMA--------VVATAE 189
Cdd:COG2319 195 KLLRtLTGHTGAVRSVAF--SPDGKLLASGSADGTVRLWDLATGKLLRTLTGHS-----GSVRSVAfspdgrllASGSAD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 190 RGLIVYQLENqpsefRRIESPLKHQH---RCVAIFKDKQNkptgFALGSIEGRVAIHYINPPNPAKdnfTFKCHRSngtn 266
Cdd:COG2319 268 GTVRLWDLAT-----GELLRTLTGHSggvNSVAFSPDGKL----LASGSDDGTVRLWDLATGKLLR---TLTGHTG---- 331
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 768018525 267 tsapqdiyAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335
Cdd:COG2319 332 --------AVRSVAFSPDGKTLASGSDDGTVRLWDLATGELLRTLTGHTGAVTSVAFSPDGRTLASGSA 392
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
32-335 |
6.56e-25 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 104.22 E-value: 6.56e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 32 IEVTSSPDDSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVqdSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111
Cdd:COG2319 71 LATLLGHTAAVLSVAFSPD---GRLLASASADGTVRLWDL--ATGLLLRTLTGHTGAVRSVAFSPDGKTLASGSADGTVR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 112 MWDLSSNQAIQ-IAQHDAPVKTIHWikAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPErcycaDVIYPMA------- 183
Cdd:COG2319 146 LWDLATGKLLRtLTGHSGAVTSVAF--SPDGKLLASGSDDGTVRLWDLATGKLLRTLTGHT-----GAVRSVAfspdgkl 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 184 -VVATAERGLIVYQLENqpsefRRIESPLKHQH---RCVAIFKDkqnkptG--FALGSIEGRVAIHYINPPNPAKdnfTF 257
Cdd:COG2319 219 lASGSADGTVRLWDLAT-----GKLLRTLTGHSgsvRSVAFSPD------GrlLASGSADGTVRLWDLATGELLR---TL 284
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 768018525 258 KCHRSngtntsapqdiyAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335
Cdd:COG2319 285 TGHSG------------GVNSVAFSPDGKLLASGSDDGTVRLWDLATGKLLRTLTGHTGAVRSVAFSPDGKTLASGSD 350
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
40-335 |
1.92e-23 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 98.18 E-value: 1.92e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 40 DSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVQdsGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ 119
Cdd:cd00200 10 GGVTCVAFSPD---GKLLATGSGDGTIKVWDLE--TGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 120 AIQ-IAQHDAPVKTIHWIkaPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPErCYCADVIYP----MAVVATAERGLIV 194
Cdd:cd00200 85 CVRtLTGHTSYVSSVAFS--PDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT-DWVNSVAFSpdgtFVASSSQDGTIKL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 195 YQLENqpseFRRIESPLKHQH--RCVAIFKDKQNkptgFALGSIEGRVAIHyinppnpakDNFTFKCHRSNGTNTSapqd 272
Cdd:cd00200 162 WDLRT----GKCVATLTGHTGevNSVAFSPDGEK----LLSSSSDGTIKLW---------DLSTGKCLGTLRGHEN---- 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 768018525 273 iyAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335
Cdd:cd00200 221 --GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSA 281
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
38-160 |
1.19e-20 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 92.28 E-value: 1.19e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 38 PDDSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVqDSGQTIpKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS 117
Cdd:COG2319 287 HSGGVNSVAFSPD---GKLLASGSDDGTVRLWDL-ATGKLL-RTLTGHTGAVRSVAFSPDGKTLASGSDDGTVRLWDLAT 361
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 768018525 118 NQAIQ-IAQHDAPVKTIHWikAPNYSCVMTGSWDKTLKFWDTRS 160
Cdd:COG2319 362 GELLRtLTGHTGAVTSVAF--SPDGRTLASGSADGTVRLWDLAT 403
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
32-168 |
7.03e-18 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 84.19 E-value: 7.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 32 IEVTSSPDDSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVQdsGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111
Cdd:COG2319 239 LRTLTGHSGSVRSVAFSPD---GRLLASGSADGTVRLWDLA--TGELLRTLTGHSGGVNSVAFSPDGKLLASGSDDGTVR 313
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 768018525 112 MWDLSSNQAIQIAQ-HDAPVKTIHWikAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168
Cdd:COG2319 314 LWDLATGKLLRTLTgHTGAVRSVAF--SPDGKTLASGSDDGTVRLWDLATGELLRTLT 369
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
85-335 |
1.28e-15 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 76.22 E-value: 1.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI-QIAQHDAPVKTIHWIkaPNYSCVMTGSWDKTLKFWDTrssnp 163
Cdd:cd00200 8 HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLrTLKGHTGPVRDVAAS--ADGTYLASGSSDKTIRLWDL----- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 164 mmvlqlpercycadviypmavvataerglivyqleNQPSEFRRIESplkHQH--RCVAIFKDKQnkptgFALGSIEGRVA 241
Cdd:cd00200 81 -----------------------------------ETGECVRTLTG---HTSyvSSVAFSPDGR-----ILSSSSRDKTI 117
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 242 IHYINPPNPAKdnFTFKCHRSngtntsapqdiyAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISAC 321
Cdd:cd00200 118 KVWDVETGKCL--TTLRGHTD------------WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSV 183
|
250
....*....|....
gi 768018525 322 CFNHNGNIFAYASS 335
Cdd:cd00200 184 AFSPDGEKLLSSSS 197
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
39-157 |
6.96e-15 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 73.91 E-value: 6.96e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 39 DDSIGCLSFSPPtlpGNFLIAGSWANDVRCWEVqDSGQTIpkaQQM--HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116
Cdd:cd00200 177 TGEVNSVAFSPD---GEKLLSSSSDGTIKLWDL-STGKCL---GTLrgHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR 249
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 768018525 117 SNQAIQ-IAQHDAPVKTIHWikAPNYSCVMTGSWDKTLKFWD 157
Cdd:cd00200 250 TGECVQtLSGHTNSVTSLAW--SPDGKRLASGSADGTIRIWD 289
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
57-335 |
2.81e-09 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 58.00 E-value: 2.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 57 LIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ-HDAPVKTIHW 135
Cdd:COG2319 49 ARLAAGAGDLTLLLLDAAAGALLATLLGHTAAVLSVAFSPDGRLLASASADGTVRLWDLATGLLLRTLTgHTGAVRSVAF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 136 ikAPNYSCVMTGSWDKTLKFWDTRssnpmmvlqlpercycadviypmavvataerglivyqlenqpsefrriesplkhqh 215
Cdd:COG2319 129 --SPDGKTLASGSADGTVRLWDLA-------------------------------------------------------- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768018525 216 rcvaifkdkqnkpTGFALGSIEGrvaihyinppnpakdnftfkcHRSngtntsapqdiyAVNGIAFHPVHGTLATVGSDG 295
Cdd:COG2319 151 -------------TGKLLRTLTG---------------------HSG------------AVTSVAFSPDGKLLASGSDDG 184
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 768018525 296 RFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335
Cdd:COG2319 185 TVRLWDLATGKLLRTLTGHTGAVRSVAFSPDGKLLASGSA 224
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
85-114 |
1.61e-06 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 44.23 E-value: 1.61e-06
10 20 30
....*....|....*....|....*....|
gi 768018525 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114
Cdd:smart00320 11 HTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
85-114 |
8.68e-06 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 42.33 E-value: 8.68e-06
10 20 30
....*....|....*....|....*....|
gi 768018525 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114
Cdd:pfam00400 10 HTGSVTSLAFSPDGKLLASGSDDGTVKVWD 39
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
126-157 |
3.58e-03 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 34.98 E-value: 3.58e-03
10 20 30
....*....|....*....|....*....|..
gi 768018525 126 HDAPVKTIHWikAPNYSCVMTGSWDKTLKFWD 157
Cdd:smart00320 11 HTGPVTSVAF--SPDGKYLASGSDDGTIKLWD 40
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
126-157 |
5.24e-03 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 34.24 E-value: 5.24e-03
10 20 30
....*....|....*....|....*....|..
gi 768018525 126 HDAPVKTIHWikAPNYSCVMTGSWDKTLKFWD 157
Cdd:pfam00400 10 HTGSVTSLAF--SPDGKLLASGSDDGTVKVWD 39
|
|
|