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Conserved domains on  [gi|767923048|ref|XP_011531931|]
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proline-rich transmembrane protein 3 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 84-468 1.09e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048   84 PEKPVASPLGPALYG----PKAAQGAQRERLPVtDDLQMAQGPSSHGWTGPLDSQELLQQEAVAPHPVGHPHLTFIPTTP 159
Cdd:PHA03247 2570 PPRPAPRPSEPAVTSrarrPDAPPQSARPRAPV-DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPP 2648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  160 RRQLRVATVPP--------SLQHEGQEGQWPPRDEGLKAK-------TKSRVPPTSPSDHQGPPHTLVSHSGTVKRPVLE 224
Cdd:PHA03247 2649 PERPRDDPAPGrvsrprraRRLGRAAQASSPPQRPRRRAArptvgslTSLADPPPPPPTPEPAPHALVSATPLPPGPAAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  225 GQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVV-YSQEPGAQPDLALARSLPP------AEELPVETPKRAGAEVS 297
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAAGPPRRLTRpavaslSESRESLPSPWDPADPP 2808

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  298 WEVSSPGP--PPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPSDPG 375
Cdd:PHA03247 2809 AAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLAR 2888

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  376 PAVNRTESPMgALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPEPTASSMASAPASSPPANATA 455
Cdd:PHA03247 2889 PAVSRSTESF-ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967

                         410
                  ....*....|...
gi 767923048  456 PPLRWGPLRRVLS 468
Cdd:PHA03247 2968 VPGRVAVPRFRVP 2980
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 84-468 1.09e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048   84 PEKPVASPLGPALYG----PKAAQGAQRERLPVtDDLQMAQGPSSHGWTGPLDSQELLQQEAVAPHPVGHPHLTFIPTTP 159
Cdd:PHA03247 2570 PPRPAPRPSEPAVTSrarrPDAPPQSARPRAPV-DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPP 2648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  160 RRQLRVATVPP--------SLQHEGQEGQWPPRDEGLKAK-------TKSRVPPTSPSDHQGPPHTLVSHSGTVKRPVLE 224
Cdd:PHA03247 2649 PERPRDDPAPGrvsrprraRRLGRAAQASSPPQRPRRRAArptvgslTSLADPPPPPPTPEPAPHALVSATPLPPGPAAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  225 GQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVV-YSQEPGAQPDLALARSLPP------AEELPVETPKRAGAEVS 297
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAAGPPRRLTRpavaslSESRESLPSPWDPADPP 2808

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  298 WEVSSPGP--PPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPSDPG 375
Cdd:PHA03247 2809 AAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLAR 2888

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  376 PAVNRTESPMgALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPEPTASSMASAPASSPPANATA 455
Cdd:PHA03247 2889 PAVSRSTESF-ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967

                         410
                  ....*....|...
gi 767923048  456 PPLRWGPLRRVLS 468
Cdd:PHA03247 2968 VPGRVAVPRFRVP 2980
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
 195-713 3.98e-06

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 51.03  E-value: 3.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  195 RVP-PTSPSDHQGPPHTLVSHSGTVKRPVLEGQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLA 273
Cdd:COG3321   860 RVPlPTYPFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAA 939

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  274 LARSLPPAEELPV-ETPKRAGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQ 352
Cdd:COG3321   940 AALLALAAAAAAAaAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAA 1019

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  353 RVRGAVEAPGTPKSLIPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPP 432
Cdd:COG3321  1020 ALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALAL 1099

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  433 PPEPTASSMASAPASSPPANATAPPLRWGPLRRVLSFSWELHVYGVGVLFLLPALLALAALAAAPAGPRLALVAAVLVLV 512
Cdd:COG3321  1100 AALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALAL 1179

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  513 ASALRSAYMLTDPYGSQARLGVRGGLVLYNLPFPLLLTALAALTLLGLGAGLPPPLQNPLLLGAVALVHGVGLLATDLLS 592
Cdd:COG3321  1180 ALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAAL 1259

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  593 TWSVLNLLTQGLSCAWGAAVALGTLCLCRRRLLDGPRGWDASPGPRLLAVAGALGLLASGLQLAAALWLYPGPGRVGRFS 672
Cdd:COG3321  1260 AALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALAAAVAA 1339

                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 767923048  673 WAWWGVHFWLRLLELTWALALALAAVAAARPRPPTEHACWA 713
Cdd:COG3321  1340 ALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAA 1380
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 230-437 6.71e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 40.40  E-value: 6.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  230 EEHLQeaaqgphFTQQDPAAPdvGSVPPVEVVYSQEPGAQPdlalarslPPAEELPVETPKRAGAEvswEVSSPGPPPK- 308
Cdd:pfam09770  97 EEQVR-------FNRQQPAAR--AAQSSAQPPASSLPQYQY--------ASQQSQQPSKPVRTGYE---KYKEPEPIPDl 156

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  309 QAD-----LPDAKdsPGPQPTDPPASEAPDRPSKPER---------AAMNGADPISPQRVrgAVEAPGTPKSLIPGPSDP 374
Cdd:pfam09770 157 QVDaslwgVAPKK--AAAPAPAPQPAAQPASLPAPSRkmmsleeveAAMRAQAKKPAQQP--APAPAQPPAAPPAQQAQQ 232

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767923048  375 GPAVNRTESPMGALQPDEAEEWPGRPQSHPPA-----PPVQAPSTSRRGLIRVTTQRALGQPPPPEPT 437
Cdd:pfam09770 233 QQQFPPQIQQQQQPQQQPQQPQQHPGQGHPVTilqrpQSPQPDPAQPSIQPQAQQFHQQPPPVPVQPT 300
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 84-468 1.09e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048   84 PEKPVASPLGPALYG----PKAAQGAQRERLPVtDDLQMAQGPSSHGWTGPLDSQELLQQEAVAPHPVGHPHLTFIPTTP 159
Cdd:PHA03247 2570 PPRPAPRPSEPAVTSrarrPDAPPQSARPRAPV-DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPP 2648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  160 RRQLRVATVPP--------SLQHEGQEGQWPPRDEGLKAK-------TKSRVPPTSPSDHQGPPHTLVSHSGTVKRPVLE 224
Cdd:PHA03247 2649 PERPRDDPAPGrvsrprraRRLGRAAQASSPPQRPRRRAArptvgslTSLADPPPPPPTPEPAPHALVSATPLPPGPAAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  225 GQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVV-YSQEPGAQPDLALARSLPP------AEELPVETPKRAGAEVS 297
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAAGPPRRLTRpavaslSESRESLPSPWDPADPP 2808

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  298 WEVSSPGP--PPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPSDPG 375
Cdd:PHA03247 2809 AAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLAR 2888

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  376 PAVNRTESPMgALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPEPTASSMASAPASSPPANATA 455
Cdd:PHA03247 2889 PAVSRSTESF-ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967

                         410
                  ....*....|...
gi 767923048  456 PPLRWGPLRRVLS 468
Cdd:PHA03247 2968 VPGRVAVPRFRVP 2980
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
247-413 5.91e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 53.34  E-value: 5.91e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 247 PAAPDVGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPKRAGAEVSwevsSPGPPPKQADLPDAKDSPGPQPTDP 326
Cdd:PRK12323 396 APAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG----APAPAPAPAAAPAAAARPAAAGPRP 471

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 327 PASEAPDRPSKPERAAMNGAdpiSPQRVRGAVEAPGTPKSLIPGPSDPGPAVNRTESPM--GALQPDEAEEWPGRPQSHP 404
Cdd:PRK12323 472 VAAAAAAAPARAAPAAAPAP---ADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPdpATADPDDAFETLAPAPAAA 548


                 ....*....
gi 767923048 405 PAPPVQAPS 413
Cdd:PRK12323 549 PAPRAAAAT 557
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
267-464 9.22e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 52.96  E-value: 9.22e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 267 GAQPdlALARSLPPAEELPVETPKRAGAEV-SWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNG 345
Cdd:PRK12323 371 GAGP--ATAAAAPVAQPAPAAAAPAAAAPApAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 346 ADPISPQRVRGAVEAPGTPKSLIPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQ 425
Cdd:PRK12323 449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPD 528

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 767923048 426 RALGQPPPPEPTASSMASAPASSPPANATAPPLRWGPLR 464
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPR 567
PHA03247 PHA03247
large tegument protein UL36; Provisional
 40-473 2.64e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.86  E-value: 2.64e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048   40 PMIPGAHPKGSVGSEPQAFDVFPENPRADSHR----NSDVRHAPAEEMPEKPVASPLGPALYGPKAAQGAQRERLPvTDD 115
Cdd:PHA03247 2601 PVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSpaanEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQA-SSP 2679

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  116 LQMAQGPSSHGWTGPLDSQELLQQEAVAPHPVGHPHLTFIPTTPRRQLRVATVPPslqhegqegqwPPRDEGLKAKTKSR 195
Cdd:PHA03247 2680 PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPA-----------LPAAPAPPAVPAGP 2748

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  196 VPPTSPSDHQGPPHTLVSHSGTVKRpvlegqggfeehlQEAAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLALA 275
Cdd:PHA03247 2749 ATPGGPARPARPPTTAGPPAPAPPA-------------APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPA 2815

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  276 RSLPPAEELPVETPKRAGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQRVR 355
Cdd:PHA03247 2816 AALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRST 2895

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  356 GAVEAPGTPKSLIPGPSDPGPAVNRTESPMGAlQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPE 435
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPP-QPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAV 2974

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 767923048  436 PTASSMASAPASSPPANATaPPLRWGPLRRVLSFSWEL 473
Cdd:PHA03247 2975 PRFRVPQPAPSREAPASST-PPLTGHSLSRVSSWASSL 3011
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
 195-713 3.98e-06

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 51.03  E-value: 3.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  195 RVP-PTSPSDHQGPPHTLVSHSGTVKRPVLEGQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLA 273
Cdd:COG3321   860 RVPlPTYPFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAA 939

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  274 LARSLPPAEELPV-ETPKRAGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQ 352
Cdd:COG3321   940 AALLALAAAAAAAaAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAA 1019

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  353 RVRGAVEAPGTPKSLIPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPP 432
Cdd:COG3321  1020 ALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALAL 1099

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  433 PPEPTASSMASAPASSPPANATAPPLRWGPLRRVLSFSWELHVYGVGVLFLLPALLALAALAAAPAGPRLALVAAVLVLV 512
Cdd:COG3321  1100 AALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALAL 1179

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  513 ASALRSAYMLTDPYGSQARLGVRGGLVLYNLPFPLLLTALAALTLLGLGAGLPPPLQNPLLLGAVALVHGVGLLATDLLS 592
Cdd:COG3321  1180 ALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAAL 1259

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  593 TWSVLNLLTQGLSCAWGAAVALGTLCLCRRRLLDGPRGWDASPGPRLLAVAGALGLLASGLQLAAALWLYPGPGRVGRFS 672
Cdd:COG3321  1260 AALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALAAAVAA 1339

                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 767923048  673 WAWWGVHFWLRLLELTWALALALAAVAAARPRPPTEHACWA 713
Cdd:COG3321  1340 ALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAA 1380
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 294-457 7.59e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 49.98  E-value: 7.59e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 294 AEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKP-------ERAAMNGADPISPQRVRGAVEAPGTPKS 366
Cdd:PRK07764 586 AVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAgaaaapaEASAAPAPGVAAPEHHPKHVAVPDASDG 665

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 367 LIPGPSDPGPA--VNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRAL--------GQPPPPEP 436
Cdd:PRK07764 666 GDGWPAKAGGAapAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASapspaaddPVPLPPEP 745

                        170       180
                 ....*....|....*....|.
gi 767923048 437 TASSMASAPASSPPANATAPP 457
Cdd:PRK07764 746 DDPPDPAGAPAQPPPPPAPAP 766
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 188-437 7.84e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 50.07  E-value: 7.84e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 188 LKAKTKSRVPPTSPSD---HQGPPHTLVSHSGTVKRPvleGQGGFEEHLQEAAQGP-----HFTQQDPAAPDVGSVP-PV 258
Cdd:PTZ00449 488 LIKKSKKKLAPIEEEDsdkHDEPPEGPEASGLPPKAP---GDKEGEEGEHEDSKESdepkeGGKPGETKEGEVGKKPgPA 564

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 259 EvvySQEPGAQPDLALARSLPPAEELP--VETPKRAGAEVSWEVSSPGPPPKQADLPDAKDSPG--PQPTDPPASEAPDR 334
Cdd:PTZ00449 565 K---EHKPSKIPTLSKKPEFPKDPKHPkdPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKrpESPKSPKRPPPPQR 641

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 335 PSKPERaamngadPISPQrvrgAVEAPGTPKSLIPgPSDPG----------PAVNRTESPMGALQPDEA---------EE 395
Cdd:PTZ00449 642 PSSPER-------PEGPK----IIKSPKPPKSPKP-PFDPKfkekfyddylDAAAKSKETKTTVVLDESfesilketlPE 709

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 767923048 396 WPGRPQSHP-PAPPVQaPSTSRrglirvTTQRALGQPPPPEPT 437
Cdd:PTZ00449 710 TPGTPFTTPrPLPPKL-PRDEE------FPFEPIGDPDAEQPD 745
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 220-412 1.08e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 46.13  E-value: 1.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 220 RPVLEGQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLALARSLP-PAEELPVETPKRAGAEVSW 298
Cdd:PRK07764 599 GPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAvPDASDGGDGWPAKAGGAAP 678

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 299 EVSSPGPPpkqadlPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPSDPGPAV 378
Cdd:PRK07764 679 AAPPPAPA------PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPA 752

                        170       180       190
                 ....*....|....*....|....*....|....
gi 767923048 379 NRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAP 412
Cdd:PRK07764 753 GAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMA 786
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 225-436 1.81e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.36  E-value: 1.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 225 GQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPKRAGAEVS---WEVS 301
Cdd:PRK07764 593 GAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGgdgWPAK 672

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 302 SPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPSDPGPavnrt 381
Cdd:PRK07764 673 AGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDD----- 747

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 767923048 382 espmgalqPDEAEEWPGRPQSHPPAPPVQAPSTSRrglirvttqralgQPPPPEP 436
Cdd:PRK07764 748 --------PPDPAGAPAQPPPPPAPAPAAAPAAAP-------------PPSPPSE 781
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 276-416 2.59e-04

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 44.61  E-value: 2.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 276 RSLPP--AEELPVETPKRAGAevswevSSPGPPPKqaDLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGAdpispqr 353
Cdd:PHA03264 252 GVVPPyfEESKGYEPPPAPSG------GSPAPPGD--DRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGA------- 316

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767923048 354 vrgaveAPGTPKsliPGPSDPGPAVNRTESpmgalqpdeaeeWPGRPQS--HPPAPPVQAPSTSR 416
Cdd:PHA03264 317 ------AGGEPK---PGPPRPAPDADRPEG------------WPSLEAItfPPPTPATPAVPRAR 360
PHA03247 PHA03247
large tegument protein UL36; Provisional
 74-458 6.15e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 6.15e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048   74 DVRHAPAEEMPEKPVASPLGPALYG----------------PKAAQGAQRERLPVTDDLQM---AQGPSSHGwtGPLDSQ 134
Cdd:PHA03247 2422 DVRFVGSEEIEELPFVSPGGDVLAGlaadgdpffartilgaPFSLSLLLGELFPGAPVYRRpaeARFPFAAG--AAPDPG 2499

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  135 ELLQQEAVAPHPVGHPHLTFIPTTPRRQlrvaTVPP----------SLQHEGQEGQWPPRDEGLKAKTKSR-VPPTSPSD 203
Cdd:PHA03247 2500 GGGPPDPDAPPAPSRLAPAILPDEPVGE----PVHPrmltwirgleELASDDAGDPPPPLPPAAPPAAPDRsVPPPRPAP 2575

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  204 HQGPPHTL-------VSHSGTVKRPVLEGQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPpvevvySQEPGAQPDLALAR 276
Cdd:PHA03247 2576 RPSEPAVTsrarrpdAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAA------NEPDPHPPPTVPPP 2649

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  277 SLPPAEELPVETPKRAGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPT--DPPaseAPDRPSKPERAAMNGADPISPQRV 354
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSlaDPP---PPPPTPEPAPHALVSATPLPPGPA 2726

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  355 RGAVEAPGTPKSLIPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLirVTTQRALGQPPPP 434
Cdd:PHA03247 2727 AARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL--SESRESLPSPWDP 2804

                         410       420
                  ....*....|....*....|....
gi 767923048  435 EPTASSMASAPASSPPANATAPPL 458
Cdd:PHA03247 2805 ADPPAAVLAPAAALPPAASPAGPL 2828
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 164-375 7.63e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.44  E-value: 7.63e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 164 RVATVPPSLQHEGQEGQWPPRDEGLKAKTKSRVPPTSPSDHQGPPHTlvSHSGTVKRPVLEGQGGFEEHLQEAAQGPHFT 243
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAA--AAPAEASAAPAPGVAAPEHHPKHVAVPDASD 664

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 244 QQDPAAPDVGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPK-RAGAEVSWEVSSPGPPPKQADLPDAKDSPGPQ 322
Cdd:PRK07764 665 GGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAgQADDPAAQPPQAAQGASAPSPAADDPVPLPPE 744

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 767923048 323 PTDPPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPSDPG 375
Cdd:PRK07764 745 PDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDED 797
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 292-414 1.17e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 42.78  E-value: 1.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 292 AGAEVSWEVSSPGPPPKQ--ADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAmnGADPISPQRVRGAVEAPGTPKSLIP 369
Cdd:PRK14951 370 AEAAAPAEKKTPARPEAAapAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAP--PAPVAAPAAAAPAAAPAAAPAAVAL 447

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 767923048 370 GPSDPGPAVNRTESPMGALQPDEAeewPGRPQSHPPAPPVQAPST 414
Cdd:PRK14951 448 APAPPAQAAPETVAIPVRVAPEPA---VASAAPAPAAAPAAARLT 489
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 252-371 1.18e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 42.78  E-value: 1.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 252 VGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPKRAGAEVSWEVSSPGPPPKQADLPDAKDS---PGPQPTDPPA 328
Cdd:PRK14951 370 AEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAapaAAPAAVALAP 449

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 767923048 329 SEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGP 371
Cdd:PRK14951 450 APPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 257-458 1.49e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 42.76  E-value: 1.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  257 PVEVVYSQEPGAQPDLALARslPPAEELPVETPKRAGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPS 336
Cdd:PRK10263  336 PVEPVTQTPPVASVDVPPAQ--PTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAE 413

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  337 KPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPS--------------------DPGPAVNRTESPMGALQPDEAEEW 396
Cdd:PRK10263  414 QPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAeeqqstfapqstyqteqtyqQPAAQEPLYQQPQPVEQQPVVEPE 493

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767923048  397 PGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPEPTASSMASAPASSPPANATAPPL 458
Cdd:PRK10263  494 PVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPV 555
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
221-408 1.89e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.14  E-value: 1.89e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 221 PVLEGQGGFEEHLQEAAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPKRAGAEVSWEV 300
Cdd:PRK07003 427 PAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAA 506

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 301 SSPGPPPKQADLPDAKDSPG-PQPTDPPASEAPDRPSKPERAAMNGAD-------PISPQRVR--GAVEAPGTPKSLIPG 370
Cdd:PRK07003 507 VPDARAPAAASREDAPAAAApPAPEARPPTPAAAAPAARAGGAAAALDvlrnagmRVSSDRGAraAAAAKPAAAPAAAPK 586

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 767923048 371 PSDPGPAVN----RTESPMGALQPDEAEEWPGRPQSHPPAPP 408
Cdd:PRK07003 587 PAAPRVAVQvptpRARAATGDAPPNGAARAEQAAESRGAPPP 628
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 28-436 3.74e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 3.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  28 RGFPRPLENSE--IPMIPGAHPKGSVGSEPQAFDVFPENPRADSHRNSDVRHAPAEEMPEKPVASPLGPalygPKAAQGA 105
Cdd:PRK07764 372 RGLLARLERLErrLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPA----PPSPAGN 447

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 106 QRERLPVTDDLQMAQGPSSHGWTGPldSQELLQQEAVAPHPVGHPhltfiPTTPRRQLRVATVPPSLQHEGQEGQWPPRD 185
Cdd:PRK07764 448 APAGGAPSPPPAAAPSAQPAPAPAA--APEPTAAPAPAPPAAPAP-----AAAPAAPAAPAAPAGADDAATLRERWPEIL 520

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 186 EGLKAKTKS----RVPPTSPSDHQGPPHTLVSHSGTVKRPVleGQGGFEEHLQEAAQ---GPHFTQQDPAAPDVGSVPPV 258
Cdd:PRK07764 521 AAVPKRSRKtwaiLLPEATVLGVRGDTLVLGFSTGGLARRF--ASPGNAEVLVTALAeelGGDWQVEAVVGPAPGAAGGE 598

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 259 EVVYSQEPGAQPDLAlARSLPPAEELPVETPKRAGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKP 338
Cdd:PRK07764 599 GPPAPASSGPPEEAA-RPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAA 677

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 339 ERAAMNGADPISPQRVRGAVEAPGTPKSlipgpsDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRG 418
Cdd:PRK07764 678 PAAPPPAPAPAAPAAPAGAAPAQPAPAP------AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDP 751

                        410
                 ....*....|....*...
gi 767923048 419 lirVTTQRALGQPPPPEP 436
Cdd:PRK07764 752 ---AGAPAQPPPPPAPAP 766
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 236-345 4.02e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.85  E-value: 4.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 236 AAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPKRAGAEVSWEVSSPGPPPKQADLPDA 315
Cdd:PRK14951 385 EAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPV 464

                         90       100       110
                 ....*....|....*....|....*....|
gi 767923048 316 KDSPGPQPTDPPASEAPDRPSKPERAAMNG 345
Cdd:PRK14951 465 RVAPEPAVASAAPAPAAAPAAARLTPTEEG 494
PHA03379 PHA03379
EBNA-3A; Provisional
 233-437 4.14e-03

EBNA-3A; Provisional


Pssm-ID: 223066 [Multi-domain]  Cd Length: 935  Bit Score: 41.20  E-value: 4.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 233 LQEAAQGPHFTQQDPAAPDVGSVPPVEVVY----SQEPGAQPDLALARSLPPAEELPVETPkragaevsWEvSSPGPPPK 308
Cdd:PHA03379 448 VHDLEPGPLHDQHSMAPCPVAQLPPGPLQDlepgDQLPGVVQDGRPACAPVPAPAGPIVRP--------WE-ASLSQVPG 518

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 309 QADLPDAKD----SPGPQPTdpPASEAPDRPSKPERAAMNGADPISPQRVR----GAVEAPGTPKSLIPGPSDPGPAVNR 380
Cdd:PHA03379 519 VAFAPVMPQpmpvEPVPVPT--VALERPVCPAPPLIAMQGPGETSGIVRVRerwrPAPWTPNPPRSPSQMSVRDRLARLR 596

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 381 ---------------------TESPMGALQPDEAEEWPGRPQSHP------PAPPVQAPSTSRRGLIRVTTQRA------ 427
Cdd:PHA03379 597 aeaqpyqasvevqppqltqvsPQQPMEYPLEPEQQMFPGSPFSQVadvmraGGVPAMQPQYFDLPLQQPISQGAplaplr 676

                        250
                 ....*....|...
gi 767923048 428 ---LGQPPPPEPT 437
Cdd:PHA03379 677 asmGPVPPVPATQ 689
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
236-436 4.63e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.99  E-value: 4.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 236 AAQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPKRAGAEVSWEVSSPGPPPKQADLPDA 315
Cdd:PRK07003 389 AAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDA 468

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 316 KDSPGPQPTDPPASEAPDRPSK--------PERAAMNGADPISPQRVRGAVEAPGTPKSLIPGPSDPGPAVNRTESPMGA 387
Cdd:PRK07003 469 QPPADSGSASAPASDAPPDAAFepapraaaPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGG 548

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767923048 388 --------------LQPDEAEEWPGRPQShPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPEP 436
Cdd:PRK07003 549 aaaaldvlrnagmrVSSDRGARAAAAAKP-AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPP 610
dnaA PRK14086
chromosomal replication initiator protein DnaA;
192-416 4.98e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 40.58  E-value: 4.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 192 TKSRVPPTSPSDHqgPPHTLVSHSGTVKRPVLEGQGG--FEEHLQEAAQGPHFTQQDPAAPDVGSVPpvevvysqEPGAQ 269
Cdd:PRK14086  89 DPSAGEPAPPPPH--ARRTSEPELPRPGRRPYEGYGGprADDRPPGLPRQDQLPTARPAYPAYQQRP--------EPGAW 158

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 270 PdlalarslppaeelpvetpkRAGAEVSWEVSSPGPPPKqadlpdakdSPGPQPTDPPASEAPDRPSKPERAAMNGADPI 349
Cdd:PRK14086 159 P--------------------RAADDYGWQQQRLGFPPR---------APYASPASYAPEQERDREPYDAGRPEYDQRRR 209

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767923048 350 SPQRVRGAVEAPGTPKSLIPGPSDPGPAVNRT----ESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSR 416
Cdd:PRK14086 210 DYDHPRPDWDRPRRDRTDRPEPPPGAGHVHRGgpgpPERDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTAR 280
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 237-436 5.84e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 40.84  E-value: 5.84e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  237 AQGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLALARSLPPAEELPVETPKRAGAEVSWEvSSPGPPPKQADLPDAK 316
Cdd:PRK10263  299 ATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQ-PVPGPQTGEPVIAPAP 377

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  317 DSPGPQPTDPPASEAPDRPSKperaamngaDPISPQRVRGAVEAPGTPKSLIPGPSDPGPAVNRTESPMgALQPDEAEEW 396
Cdd:PRK10263  378 EGYPQQSQYAQPAVQYNEPLQ---------QPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPA-PEQPVAGNAW 447

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 767923048  397 PGRPQSHPPAP-PVQAPSTSrrgLIRVTTQRALGQPPPPEP 436
Cdd:PRK10263  448 QAEEQQSTFAPqSTYQTEQT---YQQPAAQEPLYQQPQPVE 485
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 300-437 6.44e-03

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 40.29  E-value: 6.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048 300 VSSPGPPPKQadlPDAKDSPGPQPTDPPASEAPDRPSK--PERAAMNGADPISPQRVRGAVEAPGTPkslIPGPSDPGPA 377
Cdd:PLN03209 323 IPSQRVPPKE---SDAADGPKPVPTKPVTPEAPSPPIEeePPQPKAVVPRPLSPYTAYEDLKPPTSP---IPTPPSSSPA 396

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767923048 378 vnRTESPMGALQPDEAEEWP--GRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPEPT 437
Cdd:PLN03209 397 --SSKSVDAVAKPAEPDVVPspGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPT 456
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 230-437 6.71e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 40.40  E-value: 6.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  230 EEHLQeaaqgphFTQQDPAAPdvGSVPPVEVVYSQEPGAQPdlalarslPPAEELPVETPKRAGAEvswEVSSPGPPPK- 308
Cdd:pfam09770  97 EEQVR-------FNRQQPAAR--AAQSSAQPPASSLPQYQY--------ASQQSQQPSKPVRTGYE---KYKEPEPIPDl 156

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767923048  309 QAD-----LPDAKdsPGPQPTDPPASEAPDRPSKPER---------AAMNGADPISPQRVrgAVEAPGTPKSLIPGPSDP 374
Cdd:pfam09770 157 QVDaslwgVAPKK--AAAPAPAPQPAAQPASLPAPSRkmmsleeveAAMRAQAKKPAQQP--APAPAQPPAAPPAQQAQQ 232

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767923048  375 GPAVNRTESPMGALQPDEAEEWPGRPQSHPPA-----PPVQAPSTSRRGLIRVTTQRALGQPPPPEPT 437
Cdd:pfam09770 233 QQQFPPQIQQQQQPQQQPQQPQQHPGQGHPVTilqrpQSPQPDPAQPSIQPQAQQFHQQPPPVPVQPT 300
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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