|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
9.76e-102 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 294.09 E-value: 9.76e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 1 MTLTFFDQFSSPYFLGIPLILLSMLLPPLLLPTPNNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLL 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 81 LTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 161 LTANLTAGHLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
35-227 |
9.82e-46 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.59 E-value: 9.82e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 35 NNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLLLTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATL 114
Cdd:TIGR01131 36 SRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLT 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 115 LTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLISTATITLlpLMPAVSTLTI 194
Cdd:TIGR01131 116 ISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSL--MSSAIFALLL 193
|
170 180 190
....*....|....*....|....*....|...
gi 75677831 195 TILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:TIGR01131 194 LILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
90-224 |
8.96e-36 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 123.66 E-value: 8.96e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:cd00310 25 PYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMFAGH 104
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 75677831 170 LLIQLISTATITllpLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 105 LLLALLSGLVPS---LLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
90-224 |
5.17e-31 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 113.35 E-value: 5.17e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTIS-LGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAG 168
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 75677831 169 HLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
90-225 |
3.76e-20 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 84.74 E-value: 3.76e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTIS-LGHLLPEGTPtPLIPALILIETISLLIRPLALGVRLTANLTAG 168
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 169 HLLIqlistATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 157 HIIL-----LLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
9.76e-102 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 294.09 E-value: 9.76e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 1 MTLTFFDQFSSPYFLGIPLILLSMLLPPLLLPTPNNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLL 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 81 LTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 161 LTANLTAGHLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
7.40e-101 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 291.73 E-value: 7.40e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 1 MTLTFFDQFSSPYFLGIPLILLSMLLPPLLLPTPNNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLL 80
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 81 LTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 161 LTANLTAGHLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
3.01e-96 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 280.31 E-value: 3.01e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 1 MTLTFFDQFSSPYFLGIPLILLSMLLPPLLLPTPNNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLL 80
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 81 LTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
Cdd:MTH00073 81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 161 LTANLTAGHLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
3.93e-79 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 236.77 E-value: 3.93e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 1 MTLTFFDQFSSPYFLGIPLILLSMLLPPLLLPTPNNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLL 80
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 81 LTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 75677831 161 LTANLTAGHLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
2.01e-68 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 209.42 E-value: 2.01e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 1 MTLTFFDQFSSPYFLGIPLILLSMLLPPLLLPTPNnRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLL 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPN-RLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 81 LTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
Cdd:MTH00101 80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVR 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 75677831 161 LTANLTAGHLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00101 160 LTANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
35-227 |
9.82e-46 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.59 E-value: 9.82e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 35 NNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLLLTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATL 114
Cdd:TIGR01131 36 SRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLT 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 115 LTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLISTATITLlpLMPAVSTLTI 194
Cdd:TIGR01131 116 ISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSL--MSSAIFALLL 193
|
170 180 190
....*....|....*....|....*....|...
gi 75677831 195 TILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:TIGR01131 194 LILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
6-227 |
1.90e-41 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 140.49 E-value: 1.90e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 6 FDQFSSPYFLGIPLILLSMLLPPL-LLPTPNNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLLLTTN 84
Cdd:MTH00035 8 FGQFSPDTILFIPLTLLSSVIALSwLFFINPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSIN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 85 LLGLLPYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTAN 164
Cdd:MTH00035 88 VLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAAN 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 75677831 165 LTAGHLLIQLISTAtITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00035 168 LTAGHLLIFLLSTA-IWELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQNI 229
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
90-225 |
1.62e-40 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 137.99 E-value: 1.62e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:MTH00157 89 PYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGH 168
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 75677831 170 LLIQLISTATITLLPLMpavSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00157 169 LLLTLLGNTGPSLSSMI---LSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
90-226 |
6.33e-36 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 126.30 E-value: 6.33e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:MTH00176 92 PYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGH 171
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 170 LLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00176 172 LLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
90-224 |
8.96e-36 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 123.66 E-value: 8.96e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:cd00310 25 PYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMFAGH 104
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 75677831 170 LLIQLISTATITllpLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 105 LLLALLSGLVPS---LLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
90-225 |
5.96e-34 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 121.51 E-value: 5.96e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:MTH00173 92 PFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGH 171
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 170 LLIQLISTATITLLPLMPAVSTL-TITILFLLTILELAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00173 172 IVLTLIGNYLSSSLFSSSVVSLLlVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
90-224 |
5.17e-31 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 113.35 E-value: 5.17e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTIS-LGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAG 168
Cdd:pfam00119 81 PGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 75677831 169 HLLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 161 HLLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
38-222 |
2.47e-28 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 106.74 E-value: 2.47e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 38 WIT-NRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLLLTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATLLT 116
Cdd:MTH00005 41 WITpNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 117 GLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLISTATITLLPLMPAVSTLTITI 196
Cdd:MTH00005 121 SVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILT 200
|
170 180
....*....|....*....|....*.
gi 75677831 197 LFLLTILELAVAMIQAYVFVLLLSLY 222
Cdd:MTH00005 201 QMGYILFEVGICLIQAYIFCLLLSLY 226
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
35-227 |
8.62e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 100.47 E-value: 8.62e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 35 NNRWITNRLTTLQLWIINTITKQLMAPLNKPGHKWAIILTPLMMLLLTTNLLGLLPYTFTPTTQLSMNMALAFPMWLATL 114
Cdd:MTH00175 48 GDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVT 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 115 LTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLISTATITLLPL-MPAVSTLT 193
Cdd:MTH00175 128 LLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNgLIILSLFP 207
|
170 180 190
....*....|....*....|....*....|....
gi 75677831 194 ITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00175 208 MLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTI 241
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
90-227 |
8.94e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 100.12 E-value: 8.94e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:MTH00172 92 PYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGH 171
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 75677831 170 LLIQLISTATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00172 172 LLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTI 229
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
90-225 |
3.76e-20 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 84.74 E-value: 3.76e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTIS-LGHLLPEGTPtPLIPALILIETISLLIRPLALGVRLTANLTAG 168
Cdd:COG0356 78 PGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAG 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 75677831 169 HLLIqlistATITLLPLMPAVSTLTITILFLLTILELAVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 157 HIIL-----LLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
91-225 |
2.58e-18 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 80.22 E-value: 2.58e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 91 YTFTPTTQLSMNMALAFPMWLATLLTGLRNQptiSLGHLLPEGTPTPlIPALILIETISLLIRPLALGVRLTANLTAGHL 170
Cdd:PRK05815 95 LLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLLPIEIISEFSRPISLSLRLFGNMLAGEL 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 75677831 171 LIQLISTATITLLPLMPAVSTLTItilfLLTILELAVAMIQAYVFVLLLSLYLQE 225
Cdd:PRK05815 171 ILALIALLGGAGLLLALAPLILPV----AWTIFEIFVGTLQAYIFMMLTIVYISM 221
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
90-227 |
8.11e-18 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 79.21 E-value: 8.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:MTH00174 111 PYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGH 190
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 75677831 170 LLIQLISTATITLLPLMPAV-STLTITILFLLTILELAVAMIQAYVFVLLLSLYLQENI 227
Cdd:MTH00174 191 LLFSIIASFAWKMINTGILIgSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYLRDTV 249
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
90-225 |
7.81e-13 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 64.61 E-value: 7.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISlgHLLPEGTPTPLIP-ALILIETISLLIRPLALGVRLTANLTAG 168
Cdd:MTH00087 72 PYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEKFS--VYLSKGSDSFLKTfSMLFVEIVSELSRPLALTLRLTVNLMVG 149
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 75677831 169 HLLIQLISTATITLLplmpavstltitILFLLTIL-ELAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00087 150 HLISSLLNFLGEKYV------------WLSILAIMmECFVAFIQSYIFSRLIYLYLNE 195
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
90-223 |
4.13e-11 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 61.30 E-value: 4.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGH 169
Cdd:PRK13419 191 PYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGH 270
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 75677831 170 LLI-QLISTATITLLPLMPAVSTLTITILFLLtiLELAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13419 271 IVIlSLIFISFILKSYIVAVAVSVPFAIFIYL--LELFVAFLQAYIFTMLSALFI 323
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
94-223 |
3.87e-10 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 58.75 E-value: 3.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75677831 94 TPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETI-SLLIRPLALGVRLTANLTAGHLLI 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 75677831 173 -QLISTATITLLPLMPAVSTLTITILFlltILELAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13417 297 lALMGFIFQFQSWGIVPVSVIGSGLIY---VLEIFVAFLQAYIFVLLTSLFV 345
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
90-168 |
3.35e-03 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 37.17 E-value: 3.35e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 75677831 90 PYTFTPTTQLSMNMALAFPMWLATLLTGLRNQPTISLGHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAG 168
Cdd:MTH00050 43 PYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
|
|
|